View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1602_low_37 (Length: 307)
Name: NF1602_low_37
Description: NF1602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1602_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 60 - 302
Target Start/End: Complemental strand, 48565444 - 48565207
Alignment:
| Q |
60 |
atagaataagcctttggtcatcatggttagactagactgtagaaatctcggaaattcactagcggtatttaaataactcagattaaatgaaaaagactta |
159 |
Q |
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| T |
48565444 |
atagaataagcctttggtcatcatggttagactagactgtagaaatctcggaaattcactagcggtatttaa----ctcagattaaatgaaaa-gactta |
48565350 |
T |
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| Q |
160 |
tgttagttagcatgcagaagtcatcaaatgtttagtttttataagtttgcaccgcaagataatgtaaatcaatatgaactaacaaaaaataattttatta |
259 |
Q |
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| T |
48565349 |
tgttagttagcatgtagaagtcatcaaatgtttagtttttataagtttgcaccgcaagataatgtaaatcaatatgaactaacaaaaaataattttatta |
48565250 |
T |
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| Q |
260 |
aactaccaagtgaatcggtatgcatttgctttcctatgctact |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| |
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| T |
48565249 |
aactaccaagtgaatcggtatgcatttgctttcctatgatact |
48565207 |
T |
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