View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1602_low_59 (Length: 237)
Name: NF1602_low_59
Description: NF1602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1602_low_59 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 22 - 226
Target Start/End: Complemental strand, 32325224 - 32325020
Alignment:
| Q |
22 |
ttgcctaattattaagcacttcccaataatgcatatatcacaatattgctacacgcaccacccttttatacccttggcactgcactagttagttactagc |
121 |
Q |
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| T |
32325224 |
ttgcctaattattaagcacttcccaataatgcatatatcacaatattgctacacgcaccacccttttatacccttggcactgcactagttagttactagc |
32325125 |
T |
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| Q |
122 |
tagtttgcattacttagttgccactacactaaacaaacaatatctccataaggctgctacaaagtgatgatgaatagtatattcattttccttctagtat |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
32325124 |
tagtttgcattacttagttgccactacactaaacaaacaatatctccataaggctgctacaaagtgatgatgaatagtatattcattttccttctagtgt |
32325025 |
T |
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| Q |
222 |
aatct |
226 |
Q |
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||||| |
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| T |
32325024 |
aatct |
32325020 |
T |
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