View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1603-INSERTION-3 (Length: 188)
Name: NF1603-INSERTION-3
Description: NF1603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1603-INSERTION-3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 38627200 - 38627020
Alignment:
| Q |
8 |
cgacggccggaacacaacggaagctccggtgaccattgctgattatccgctgtggcctgataatcagggtttgaggaggcagcatagtgtagagtactgg |
107 |
Q |
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| T |
38627200 |
cgacggccggaacacaacggaagctccggtgaccattgctgattatccgctgtggcctgataatcagggtttgaggaggcagcatagtgtagagtactgg |
38627101 |
T |
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| Q |
108 |
atgatgggttcgcttcttaacggcggtggcaatggaagtgaagcggtaagggttttggatccggaggttgttgatgtgtat |
188 |
Q |
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| T |
38627100 |
atgatgggttcgcttcttaacggtggtggcaatggaagtgaagcggtaagggttttggatccggaggttgttgatgtgtat |
38627020 |
T |
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