View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16032_high_6 (Length: 290)
Name: NF16032_high_6
Description: NF16032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16032_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 280
Target Start/End: Original strand, 38068447 - 38068710
Alignment:
| Q |
17 |
taaaggaatatactaatactttacatgcaatgaggggaatctttgtgagaaataataaaccggtccccatctattacaataggcagcaccatcattatca |
116 |
Q |
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| T |
38068447 |
taaaggaatatactaatactttacatgcaatgaggggaatctttgtgagaaataataaaccggtccccatctattacaataggcagcaccatcattatca |
38068546 |
T |
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| Q |
117 |
taagttcatgacaaaagaataagaaaaagaaaagacactgttttcaatcatacatcatcttctgcttcatcctaaaacaatnnnnnnnnnnnnnnnnnnn |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38068547 |
taagttcatgacaaaagaataagaaaaagaaaagacactgttttcaatcatacatcatcttctgcttcatcctaaaacaatgggggggggggaaccaaaa |
38068646 |
T |
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| Q |
217 |
ncaaccaaattaagagtcattacttggaattaactcaataccctctcttatctctatattcatc |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38068647 |
acaaccaaattaagagtcattacttggaattaactcaataccctctcttatctctatattcatc |
38068710 |
T |
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