View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16032_low_12 (Length: 208)

Name: NF16032_low_12
Description: NF16032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16032_low_12
NF16032_low_12
[»] chr8 (26 HSPs)
chr8 (19-143)||(10997431-10997555)
chr8 (158-203)||(9738723-9738768)
chr8 (161-208)||(40102022-40102069)
chr8 (157-208)||(45101391-45101442)
chr8 (160-206)||(37033128-37033174)
chr8 (162-203)||(22767132-22767173)
chr8 (156-201)||(28927675-28927720)
chr8 (160-208)||(21418617-21418665)
chr8 (157-200)||(30170762-30170805)
chr8 (161-208)||(35633994-35634041)
chr8 (158-200)||(67194-67236)
chr8 (161-203)||(3988904-3988946)
chr8 (162-208)||(10553108-10553154)
chr8 (160-201)||(5740806-5740847)
chr8 (158-199)||(7678728-7678769)
chr8 (159-208)||(40719668-40719717)
chr8 (160-200)||(1248251-1248291)
chr8 (160-200)||(3155841-3155881)
chr8 (160-200)||(7376504-7376544)
chr8 (157-201)||(13267118-13267162)
chr8 (160-208)||(22852864-22852912)
chr8 (160-200)||(26629143-26629183)
chr8 (160-208)||(34996385-34996433)
chr8 (160-208)||(40842012-40842060)
chr8 (160-208)||(42716318-42716366)
chr8 (160-200)||(43066627-43066667)
[»] chr4 (34 HSPs)
chr4 (157-208)||(53583153-53583204)
chr4 (157-208)||(38844515-38844566)
chr4 (155-208)||(49424845-49424898)
chr4 (161-201)||(45277113-45277153)
chr4 (162-208)||(25725719-25725765)
chr4 (162-208)||(46794526-46794572)
chr4 (159-208)||(1562561-1562610)
chr4 (159-208)||(51397896-51397945)
chr4 (159-208)||(55595946-55595995)
chr4 (160-201)||(56379390-56379431)
chr4 (160-208)||(4896525-4896573)
chr4 (160-203)||(10096772-10096815)
chr4 (160-207)||(16004352-16004399)
chr4 (160-203)||(42516648-42516691)
chr4 (162-208)||(25523223-25523269)
chr4 (162-208)||(26885291-26885337)
chr4 (158-208)||(33820361-33820411)
chr4 (161-203)||(34116570-34116612)
chr4 (158-200)||(43358609-43358651)
chr4 (158-208)||(51296214-51296264)
chr4 (162-208)||(51389099-51389145)
chr4 (162-203)||(3968885-3968926)
chr4 (162-203)||(11064119-11064160)
chr4 (158-203)||(22920301-22920346)
chr4 (158-203)||(22971453-22971498)
chr4 (161-206)||(40755920-40755965)
chr4 (163-208)||(46911899-46911944)
chr4 (158-203)||(51318699-51318744)
chr4 (160-208)||(12241056-12241104)
chr4 (164-208)||(29525860-29525904)
chr4 (161-201)||(30973596-30973636)
chr4 (157-201)||(36792327-36792371)
chr4 (160-200)||(50831789-50831829)
chr4 (160-208)||(51717307-51717355)
[»] chr2 (22 HSPs)
chr2 (161-208)||(23880094-23880141)
chr2 (162-208)||(34249580-34249626)
chr2 (160-208)||(32749996-32750044)
chr2 (157-208)||(4738597-4738648)
chr2 (157-208)||(13104474-13104525)
chr2 (158-208)||(1889143-1889193)
chr2 (160-208)||(14797675-14797723)
chr2 (160-208)||(33296096-33296144)
chr2 (158-202)||(44189823-44189867)
chr2 (162-208)||(7086149-7086195)
chr2 (162-208)||(11980651-11980697)
chr2 (162-208)||(31635835-31635881)
chr2 (162-208)||(32688569-32688615)
chr2 (159-200)||(6336249-6336290)
chr2 (159-208)||(7498016-7498065)
chr2 (158-199)||(8482255-8482296)
chr2 (161-201)||(546417-546457)
chr2 (160-208)||(5067671-5067719)
chr2 (160-200)||(9979094-9979134)
chr2 (160-200)||(39737719-39737759)
chr2 (160-208)||(42251945-42251993)
chr2 (160-208)||(42665837-42665885)
[»] chr5 (14 HSPs)
chr5 (150-208)||(42909707-42909765)
chr5 (160-208)||(19376157-19376205)
chr5 (158-201)||(33393630-33393673)
chr5 (158-208)||(125088-125138)
chr5 (156-199)||(13734383-13734426)
chr5 (157-208)||(42699052-42699103)
chr5 (162-208)||(7077367-7077413)
chr5 (164-206)||(12910786-12910828)
chr5 (162-208)||(32873174-32873220)
chr5 (162-208)||(34381012-34381058)
chr5 (162-208)||(39595272-39595318)
chr5 (159-200)||(28811426-28811467)
chr5 (160-208)||(22647586-22647634)
chr5 (160-208)||(27392727-27392775)
[»] chr3 (33 HSPs)
chr3 (159-203)||(51410803-51410847)
chr3 (162-208)||(8066355-8066401)
chr3 (162-208)||(37303099-37303145)
chr3 (159-208)||(22813069-22813118)
chr3 (159-208)||(26279881-26279930)
chr3 (160-208)||(37303381-37303429)
chr3 (161-208)||(34271515-34271562)
chr3 (165-203)||(39540238-39540276)
chr3 (160-201)||(28269804-28269845)
chr3 (161-206)||(46315982-46316027)
chr3 (160-208)||(11335327-11335375)
chr3 (159-203)||(18169154-18169198)
chr3 (157-200)||(1901959-1902002)
chr3 (157-200)||(1911405-1911448)
chr3 (157-208)||(5398913-5398964)
chr3 (161-208)||(43900782-43900829)
chr3 (161-208)||(44334826-44334873)
chr3 (165-208)||(48649583-48649626)
chr3 (162-208)||(9027873-9027919)
chr3 (158-192)||(31326706-31326740)
chr3 (157-203)||(33007355-33007401)
chr3 (162-208)||(36442216-36442262)
chr3 (161-203)||(51032654-51032696)
chr3 (162-208)||(51464297-51464343)
chr3 (159-208)||(35272024-35272073)
chr3 (159-200)||(37894276-37894317)
chr3 (159-208)||(40159863-40159912)
chr3 (160-208)||(108429-108477)
chr3 (159-203)||(24748592-24748636)
chr3 (161-201)||(28300680-28300720)
chr3 (160-208)||(32008031-32008079)
chr3 (160-208)||(37215256-37215304)
chr3 (159-203)||(48945844-48945888)
[»] chr7 (15 HSPs)
chr7 (158-208)||(28824499-28824549)
chr7 (159-201)||(33684677-33684719)
chr7 (161-208)||(21752657-21752704)
chr7 (160-208)||(9055265-9055313)
chr7 (157-208)||(39369297-39369348)
chr7 (157-199)||(37352013-37352055)
chr7 (158-199)||(2469699-2469740)
chr7 (163-208)||(2756954-2756999)
chr7 (160-201)||(6822554-6822595)
chr7 (159-200)||(48395245-48395286)
chr7 (161-201)||(10656631-10656671)
chr7 (157-201)||(28596901-28596945)
chr7 (160-208)||(41966330-41966378)
chr7 (160-208)||(42276089-42276137)
chr7 (159-195)||(43213316-43213352)
[»] chr6 (15 HSPs)
chr6 (162-208)||(8395342-8395388)
chr6 (160-208)||(29383555-29383603)
chr6 (157-200)||(32729884-32729927)
chr6 (162-208)||(2333365-2333411)
chr6 (162-208)||(17835612-17835658)
chr6 (160-201)||(15666805-15666846)
chr6 (160-201)||(31517201-31517242)
chr6 (162-203)||(32457282-32457323)
chr6 (159-199)||(1897694-1897734)
chr6 (160-208)||(3821376-3821424)
chr6 (160-208)||(8778897-8778945)
chr6 (160-208)||(19789101-19789149)
chr6 (160-208)||(28965865-28965913)
chr6 (160-208)||(31480859-31480907)
chr6 (160-200)||(31883337-31883377)
[»] chr1 (24 HSPs)
chr1 (161-203)||(31436819-31436861)
chr1 (160-201)||(1615034-1615075)
chr1 (162-203)||(28253015-28253056)
chr1 (162-208)||(39010814-39010860)
chr1 (160-208)||(50226904-50226952)
chr1 (159-203)||(52233251-52233295)
chr1 (161-208)||(18541076-18541123)
chr1 (161-208)||(27810272-27810319)
chr1 (161-208)||(36690597-36690644)
chr1 (161-208)||(36706698-36706745)
chr1 (160-199)||(38913596-38913635)
chr1 (162-205)||(45740572-45740615)
chr1 (157-200)||(48872374-48872417)
chr1 (158-208)||(366653-366703)
chr1 (162-208)||(3606119-3606165)
chr1 (162-203)||(8464543-8464584)
chr1 (158-203)||(12708086-12708131)
chr1 (158-203)||(12713540-12713585)
chr1 (158-203)||(12717631-12717676)
chr1 (158-191)||(25061751-25061784)
chr1 (160-201)||(49589995-49590036)
chr1 (160-208)||(25302668-25302716)
chr1 (160-208)||(31378483-31378531)
chr1 (160-208)||(44112452-44112500)
[»] scaffold0155 (1 HSPs)
scaffold0155 (161-199)||(3294-3332)
[»] scaffold0011 (1 HSPs)
scaffold0011 (159-208)||(219689-219738)
[»] scaffold0024 (2 HSPs)
scaffold0024 (160-203)||(91946-91989)
scaffold0024 (160-208)||(60467-60515)
[»] scaffold0014 (1 HSPs)
scaffold0014 (158-208)||(199262-199312)
[»] scaffold0131 (1 HSPs)
scaffold0131 (163-203)||(15564-15604)
[»] scaffold0130 (1 HSPs)
scaffold0130 (160-208)||(25701-25748)
[»] scaffold0009 (1 HSPs)
scaffold0009 (165-201)||(263727-263763)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 10997431 - 10997555
Alignment:
Q  19 acatctgagtcgggagtgcggcggcgatcgttgtgtctatggcgttggtaaggggtttcgatggtggaggagagtcttgccatggtaaaaatgtgcaaat 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10997431 acatcggagtcgggagtgcggcggcgatcgttgtgtctatggcgttggtaaggggtttcgatggtggaggagagtcttgccatggtaaaaatgtgcaaat 10997530  T
Q  119 tggattgttatctaggttgtaatat 143  Q
    ||||||||||| |||||| ||||||    
T  10997531 tggattgttatttaggttctaatat 10997555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 9738768 - 9738723
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||    
T  9738768 aaaagagaaatgatatttgtacaaccactttctcacaattttttga 9738723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 40102022 - 40102069
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  40102022 agagaaatgatatttgtacaaccactttttcacaactttttgacaact 40102069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 45101391 - 45101442
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  45101391 aaaaagagaaatgatatttgtacaaccactttgtgacaactttttgacaact 45101442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 37033174 - 37033128
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataa 206  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||    
T  37033174 aagagaaatgatatttgcacaaccactttctgacaactttttgataa 37033128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 22767132 - 22767173
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  22767132 gagaaatgatatttgtacaaccattttctcacaactttttga 22767173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 28927675 - 28927720
Alignment:
Q  156 gaaaaagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||||||||||||||||||||||||| |||| | ||||||||||    
T  28927675 gaaaaagagaaatgatatttgtacaaccactttgtgacaacttttt 28927720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 21418665 - 21418617
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  21418665 aagagaaatgatatttgtacaaccactttctgacaaccttttgacaact 21418617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 30170805 - 30170762
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  30170805 aaaaagagaaatgatatttgtacaaccactttttgacaactttt 30170762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 35634041 - 35633994
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||| ||||||| |||||| |||||||||||| ||||    
T  35634041 agagaaatgatatttctacaaccactttctgacaactttttgacaact 35633994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 67236 - 67194
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||||  ||||| |||||||||    
T  67236 aaaagagaaatgatatttgtacaaccattttctaacaactttt 67194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 3988904 - 3988946
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||| |||||| |||| |||||||    
T  3988904 agagaaatgatatttgtacaaccactttctaacaaatttttga 3988946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 10553154 - 10553108
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  10553154 gagaaatgatatttgtacaaccactttctgacaattttttgacaact 10553108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 5740847 - 5740806
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  5740847 aagagaaatgatatttgtacaaccactttttgacaacttttt 5740806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 7678728 - 7678769
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaacttt 199  Q
    |||||||||||||||||||||||||| |||| | ||||||||    
T  7678728 aaaagagaaatgatatttgtacaaccactttttgacaacttt 7678769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 40719717 - 40719668
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||  ||||| ||||| |||||| ||||    
T  40719717 aaagagaaatgatatttgtacaaccattttctaacaaccttttgacaact 40719668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 1248251 - 1248291
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||  ||||| |||||||||    
T  1248251 aagagaaatgatatttgtacaaccattttcttacaactttt 1248291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 3155841 - 3155881
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||| |||| | |||||||||    
T  3155841 aagagaaatgatatttgtacaaccactttttaacaactttt 3155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 7376504 - 7376544
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||  ||||| |||||||||    
T  7376504 aagagaaatgatatttgtacaaccaatttctaacaactttt 7376544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 13267162 - 13267118
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||| ||||| |||| | ||||||||||    
T  13267162 aaaaagagaaatgatatttgttcaaccactttgtgacaacttttt 13267118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 22852912 - 22852864
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | ||||||| |||| ||||    
T  22852912 aagagaaatgatatttgtacaaccactttgtgacaacttcttgacaact 22852864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 26629183 - 26629143
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||| |||| | |||||||||    
T  26629183 aagagaaatgatatttgtacaaccactttttgacaactttt 26629143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 34996433 - 34996385
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  34996433 aagagaaatgatatttgtacaaccactttattacaattttttgacaact 34996385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 40842012 - 40842060
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | | |||||||||| ||||    
T  40842012 aagagaaatgatatttgtacaaccactttgtgataactttttgacaact 40842060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 42716318 - 42716366
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| ||| || ||||||| ||||    
T  42716318 aagagaaatgatatttgtacaaccactttttcataattttttgacaact 42716366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 43066667 - 43066627
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||| |||| | |||||||||    
T  43066667 aagagaaatgatatttgtacaaccactttttaacaactttt 43066627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 3e-16; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 53583204 - 53583153
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  53583204 aaaaagagaaatgatatttgtacaaccactttctcacaactttttgacaact 53583153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 38844566 - 38844515
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  38844566 aaaaagaaaaatgatatttgtacaaccactttctcacaactttttgacaact 38844515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 49424898 - 49424845
Alignment:
Q  155 ggaaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||||| ||||    
T  49424898 ggaaaaagagaaatgatatttgtacaacctttttgtaacaactttttgacaact 49424845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 45277153 - 45277113
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  45277153 agagaaatgatatttgtacaaccactttctcacaacttttt 45277113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 25725765 - 25725719
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||    
T  25725765 gagaaatgatatttgtacaaccactttctaacaactttttgacaact 25725719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 46794572 - 46794526
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||    
T  46794572 gagaaatgatatttgtacaaccactttctgacaactttttgacaact 46794526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 1562610 - 1562561
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  1562610 aaagagaaatgatatttgtacaaccattttctaacaactttttgacaact 1562561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 51397945 - 51397896
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  51397945 aaagagaaatgatatttgtacaaccactttattacaactttttgacaact 51397896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 55595946 - 55595995
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  55595946 aaagagaaatgatatttgtacaaccaatttctaacaactttttgacaact 55595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 56379390 - 56379431
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  56379390 aagagaaatgatatttgtacaaccacttcctcacaacttttt 56379431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 4896573 - 4896525
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  4896573 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaact 4896525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 10096815 - 10096772
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||||| |||| | ||||||||||||    
T  10096815 aagagaaatgatatttgtacaaccactttattacaactttttga 10096772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 16004399 - 16004352
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataac 207  Q
    |||||||||||||||||| ||||| |||| | ||||||||||||||||    
T  16004399 aagagaaatgatatttgttcaaccactttatgacaactttttgataac 16004352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 42516648 - 42516691
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||||| |||| | ||||||||||||    
T  42516648 aagagaaatgatatttgtacaaccactttattacaactttttga 42516691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 25523269 - 25523223
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||   |||||||||||||||||| ||||    
T  25523269 gagaaatgatatttgtacaactattttctcacaactttttgacaact 25523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 26885291 - 26885337
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||| | ||||||||| |||||||    
T  26885291 gagaaatgatatttgtacaaccactttgtgacaacttttagataact 26885337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 33820411 - 33820361
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||   ||||| |||||||||||| ||||    
T  33820411 aaaagagaaatgatatttgtacaactattttctaacaactttttgacaact 33820361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 34116612 - 34116570
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||| |||| | ||||||||||||    
T  34116612 agagaaatgatatttgtacaaccactttgtgacaactttttga 34116570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Original strand, 43358609 - 43358651
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||||  ||||| |||||||||    
T  43358609 aaaagagaaatgatatttgtacaaccaatttctaacaactttt 43358651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 51296264 - 51296214
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| | |||| | |||||||||||| ||||    
T  51296264 aaaagagaaatgatatttgtacaatcactttatgacaactttttgacaact 51296214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 51389145 - 51389099
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||| | |||||||||||| ||||    
T  51389145 gagaaatgatatttgtacaaccactttgtaacaactttttgacaact 51389099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 3968885 - 3968926
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  3968885 gagaaatgatatttgtacaaccattttctaacaactttttga 3968926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 11064160 - 11064119
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||| |||| | ||||||||||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaactttttga 11064119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 22920346 - 22920301
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||    
T  22920346 aaaagagaaatgatatttgcacaaccaatttctaacaactttttga 22920301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 22971453 - 22971498
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||    
T  22971453 aaaagagaaatgatatttgcacaaccaatttctaacaactttttga 22971498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 40755920 - 40755965
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataa 206  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||    
T  40755920 agagaaatgatatttgtacaaccattttctaacaattttttgataa 40755965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 46911899 - 46911944
Alignment:
Q  163 agaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||| ||||| | ||||||||||||||||||| ||||    
T  46911899 agaaatgatatttttacaatcactttctcacaactttttgacaact 46911944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 51318699 - 51318744
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||||||| |||| | | ||||||||||    
T  51318699 aaaagagaaatgatatttgtacaaccactttgtgataactttttga 51318744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 12241056 - 12241104
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||   ||||| |||||||||||| ||||    
T  12241056 aagagaaatgatatttgtacaactattttctaacaactttttgacaact 12241104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 29525860 - 29525904
Alignment:
Q  164 gaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||  ||| | |||||||||||||||||    
T  29525860 gaaatgatatttgtacaaccattttattacaactttttgataact 29525904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 30973596 - 30973636
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||||| |||| | ||||||||||    
T  30973596 agagaaatgatatttgtacaaccactttatgacaacttttt 30973636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 36792327 - 36792371
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||||||||||||||||||||| || |||| | ||||||||||    
T  36792327 aaaaagagaaatgatatttgtacatccactttataacaacttttt 36792371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 50831829 - 50831789
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||| |||| | |||||||||    
T  50831829 aagagaaatgatatttgtacaaccactttttgacaactttt 50831789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 51717355 - 51717307
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||  ||| | ||||||| |||||||||    
T  51717355 aagagaaatgatatttgtacaaccaatttgtgacaacttcttgataact 51717307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 23880094 - 23880141
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23880094 agagaaatgatatttgtacaaccactttctcacaactttttgataact 23880141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 34249580 - 34249626
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  34249580 gagaaatgatatttgtacaaccactttctcacaactttttgacaact 34249626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 32749996 - 32750044
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  32749996 aagagaaatgatatttgtacaaccactttttcacaactttttgacaact 32750044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 4738648 - 4738597
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  4738648 aaaaagagaaatgatatttgtacaaccactttgtgacaactttttgacaact 4738597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 13104474 - 13104525
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||| ||||    
T  13104474 aaaaagagaaatgatattcgtacaaccactttctctcaactttttgacaact 13104525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 1889143 - 1889193
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  1889143 aaaagagaaatgatatttgtacaaccactttctgacaattttttgacaact 1889193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 14797723 - 14797675
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  14797723 aagagaaatgatatttgtacaaccaatttctaacaactttttgacaact 14797675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 33296144 - 33296096
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  33296144 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaact 33296096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 44189823 - 44189867
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttg 202  Q
    |||||||||||||||||||||||||| |||| | |||||||||||    
T  44189823 aaaagagaaatgatatttgtacaaccactttatgacaactttttg 44189867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 7086195 - 7086149
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||  || ||||||||||||||||||| ||||    
T  7086195 gagaaatgatatttgtaccgccactttctcacaactttttgacaact 7086149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 11980651 - 11980697
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  11980651 gagaaatgatatttgtacaaccattttctaacaactttttgacaact 11980697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 31635881 - 31635835
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  31635881 gagaaatgatatttgtacaaccattttctaacaactttttgacaact 31635835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 32688615 - 32688569
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||||| |||| ||||||| ||||    
T  32688615 gagaaatgatatttgtacaaccactttctgacaattttttgacaact 32688569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 6336249 - 6336290
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  6336249 aaagagaaatgatatttgtacaaccattttctaacaactttt 6336290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 7498065 - 7498016
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||  ||| | |||||||||||| ||||    
T  7498065 aaagagaaatgatatttgtacaaccattttattacaactttttgacaact 7498016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 8482296 - 8482255
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaacttt 199  Q
    |||||||||||||||||||||||||| |||| | ||||||||    
T  8482296 aaaagagaaatgatatttgtacaaccactttatgacaacttt 8482255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 546457 - 546417
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||||| |||| | ||||||||||    
T  546457 agagaaatgatatttgtacaaccactttattacaacttttt 546417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 5067719 - 5067671
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||| |  |||| | |||||||||||||||||    
T  5067719 aagagaaatgatatttgtacatctactttgtgacaactttttgataact 5067671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 9979094 - 9979134
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||| |||| |||||| ||||    
T  9979094 aagagaaatgatatttgtacaaccactttttcacaattttt 9979134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 39737759 - 39737719
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||  ||||| |||||||||    
T  39737759 aagagaaatgatatttgtacaaccaatttctaacaactttt 39737719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 42251993 - 42251945
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| | ||||   |||||||||||||||||    
T  42251993 aagagaaatgatatttgtacaatcactttagtacaactttttgataact 42251945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 42665885 - 42665837
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| | |||| | |||||||||||| ||||    
T  42665885 aagagaaatgatatttgtacaatcactttattacaactttttgacaact 42665837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 42909707 - 42909765
Alignment:
Q  150 gcaaaggaaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  42909707 gcaaagaaaaaagagaaattatatttgtacaaccactttctcacaactttttgacaact 42909765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 19376205 - 19376157
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  19376205 aagagaaatgatatttgtacaaccactttctgacaactttttgataact 19376157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 33393630 - 33393673
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  33393630 aaaagagaaatgatatttgtacaaccattttctcacaacttttt 33393673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 125088 - 125138
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||  |||| | |||||||||||||||||    
T  125088 aaaagagaaatgatatttgtacaactactttgtgacaactttttgataact 125138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 13734426 - 13734383
Alignment:
Q  156 gaaaaagagaaatgatatttgtacaacctctttctcacaacttt 199  Q
    |||||||||||||||||||||||||||| |||| | ||||||||    
T  13734426 gaaaaagagaaatgatatttgtacaaccactttatgacaacttt 13734383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 42699052 - 42699103
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||| ||||||||||||||||||||||  ||| | |||||||||||||||||    
T  42699052 aaaatgagaaatgatatttgtacaaccattttgtgacaactttttgataact 42699103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 7077413 - 7077367
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||  ||| | |||||||||||||||||    
T  7077413 gagaaatgatatttgtacaaccattttgttacaactttttgataact 7077367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 12910786 - 12910828
Alignment:
Q  164 gaaatgatatttgtacaacctctttctcacaactttttgataa 206  Q
    |||||||||||||||||||| |||| | |||||||||||||||    
T  12910786 gaaatgatatttgtacaaccactttgtgacaactttttgataa 12910828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 32873220 - 32873174
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  32873220 gagaaatgatatttgtacaaccaatttctaacaactttttgacaact 32873174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 34381012 - 34381058
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||| | |||||||||||| ||||    
T  34381012 gagaaatgatatttgtacaaccactttgtgacaactttttgacaact 34381058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 39595272 - 39595318
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||| | |||||||||||| ||||    
T  39595272 gagaaatgatatttgtacaaccactttgtgacaactttttgacaact 39595318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 28811426 - 28811467
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||| |||| | |||||||||    
T  28811426 aaagagaaatgatatttgtacaaccactttgtgacaactttt 28811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 22647634 - 22647586
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||| ||||    
T  22647634 aagagaaatgatatttgcacaaccaatttctaacaactttttgacaact 22647586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 27392775 - 27392727
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| ||| ||| ||| ||||||| ||||    
T  27392775 aagagaaatgatatttgtacaaccacttgctcgcaattttttgacaact 27392727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 51410803 - 51410847
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  51410803 aaagagaaatgatatttgtacaaccactttctcacaactttttga 51410847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 8066355 - 8066401
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  8066355 gagaaatgatatttgtacaaccactttctcacaactttttgacaact 8066401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 37303145 - 37303099
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  37303145 gagaaatgatatttgtacaaccactttctcacaactttttgacaact 37303099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 22813069 - 22813118
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  22813069 aaagagaaatgatatttgtacaaccactttctgacaactttttgacaact 22813118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 26279881 - 26279930
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  26279881 aaagagaaatgatatttgtacaaccactttctgacaactttttgacaact 26279930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 37303381 - 37303429
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  37303381 aagagaaatgatatttgtacaaccactttctcgcaactttttgacaact 37303429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 34271562 - 34271515
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||    
T  34271562 agagaaatgatatttgtacaaccactttgtaacaactttttgataact 34271515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 39540238 - 39540276
Alignment:
Q  165 aaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  39540238 aaatgatatttgtacaaccactttctcacaactttttga 39540276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 28269804 - 28269845
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  28269804 aagaggaatgatatttgtacaaccactttctcacaacttttt 28269845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 46316027 - 46315982
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataa 206  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||    
T  46316027 agagaaatgatatttgtacaaccactttatgacaactttttgataa 46315982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 11335375 - 11335327
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  11335375 aagagaaatgatatttgtacaaccattttctaacaactttttgacaact 11335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 18169154 - 18169198
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||    
T  18169154 aaagagaaatgatatttgtacaaccactttgtgacaactttttga 18169198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 1902002 - 1901959
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  1902002 aaaaagagaaatgatatttgtacaaccactttgtgacaactttt 1901959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 1911448 - 1911405
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  1911448 aaaaagagaaatgatatttgtacaaccactttgtgacaactttt 1911405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 5398913 - 5398964
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  5398913 aaaaagagaaatgatatttgtacaaccactttgtgacaattttttgacaact 5398964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 43900829 - 43900782
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  43900829 agagaaatgatatttgtacaaccactttattacaactttttgacaact 43900782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 44334873 - 44334826
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  44334873 agagaaatgatatttgtacaaccactttattacaactttttgacaact 44334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 48649583 - 48649626
Alignment:
Q  165 aaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||    
T  48649583 aaatgatatttgtacaaccactttctaacaactttttgacaact 48649626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 9027873 - 9027919
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||| | | |||||||||||||||    
T  9027873 gagaaatgatatttgtacaaccactttgtgataactttttgataact 9027919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Original strand, 31326706 - 31326740
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctca 192  Q
    |||||||||||||||||||||||||| ||||||||    
T  31326706 aaaagagaaatgatatttgtacaaccactttctca 31326740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 33007355 - 33007401
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||| ||||||||||||||||| |  ||||||||||||||||||    
T  33007355 aaaaagataaatgatatttgtacaatcaatttctcacaactttttga 33007401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 36442216 - 36442262
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  36442216 gagaaatgatatttgtataaccactttctcacaattttttgacaact 36442262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 51032696 - 51032654
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||||  ||||| ||||||||||||    
T  51032696 agagaaatgatatttgtacaaccattttctaacaactttttga 51032654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 51464343 - 51464297
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| |||| | |||||||||||| ||||    
T  51464343 gagaaatgatatttgtacaaccactttgtgacaactttttgacaact 51464297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 35272024 - 35272073
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||| |||| | ||||| |||||| ||||    
T  35272024 aaagagaaatgatatttgtacaaccactttgtgacaaccttttgacaact 35272073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 37894317 - 37894276
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||||  ||||| |||||||||    
T  37894317 aaagagaaatgatatttgtacaaccattttctaacaactttt 37894276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 40159912 - 40159863
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||   ||||| |||||||||||| ||||    
T  40159912 aaagagaaatgatatttgtacaactattttctaacaactttttgacaact 40159863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 108429 - 108477
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  108429 aagagaaatgatatttgtacaaccactttgtgacaattttttgacaact 108477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 24748592 - 24748636
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||||| |||| |  |||||||||||    
T  24748592 aaagagaaatgatatttgtacaaccactttattgcaactttttga 24748636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 28300720 - 28300680
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||||| |||| | ||||||||||    
T  28300720 agagaaatgatatttgtacaaccactttatgacaacttttt 28300680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 32008031 - 32008079
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||| ||||    
T  32008031 aagagaaatgatatttgcacaaccaatttctaacaactttttgacaact 32008079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 37215304 - 37215256
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||| ||||||| |||||| |||| ||||||| ||||    
T  37215304 aagagaaatgatatttatacaaccactttcttacaattttttgacaact 37215256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 48945844 - 48945888
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||||| |||| | ||||||| ||||    
T  48945844 aaagagaaatgatatttgtacaaccactttgtgacaacttcttga 48945888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 28824499 - 28824549
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  28824499 aaaagagaaatgatatttgtacaaccactttctgacaactttttgacaact 28824549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 33684677 - 33684719
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  33684677 aaagagaaatgatatttgtacaaccactttctcacaacttttt 33684719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 21752657 - 21752704
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  21752657 agagaaatgatatttgtacaatcactttctcacaactttttgacaact 21752704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 9055265 - 9055313
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  9055265 aagagaaatgatatttgtacaaccaatttctaacaactttttgacaact 9055313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 39369297 - 39369348
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||| ||||||||||||||||||||||  ||| | |||||||||||||||||    
T  39369297 aaaatgagaaatgatatttgtacaacccttttgtaacaactttttgataact 39369348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 37352055 - 37352013
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaacttt 199  Q
    ||||||||||||||||||||||||||| |||| | ||||||||    
T  37352055 aaaaagagaaatgatatttgtacaaccactttgtgacaacttt 37352013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 2469699 - 2469740
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaacttt 199  Q
    |||||||||||||||||||||||||| |||| | ||||||||    
T  2469699 aaaagagaaatgatatttgtacaaccactttgtgacaacttt 2469740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 2756999 - 2756954
Alignment:
Q  163 agaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||  ||||| |||||||||||| ||||    
T  2756999 agaaatgatatttgtacaaccaatttctaacaactttttgacaact 2756954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 6822595 - 6822554
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||||||  ||||| ||||||||||    
T  6822595 aagagaaatgatatttgtacaaccattttctaacaacttttt 6822554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 48395245 - 48395286
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||| |||| | |||||||||    
T  48395245 aaagagaaatgatatttgtacaaccactttttgacaactttt 48395286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 10656631 - 10656671
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||||||||||||||||||||  ||||| ||||||||||    
T  10656631 agagaaatgatatttgtacaaccaatttctgacaacttttt 10656671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 28596901 - 28596945
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||| |||||||||||||||||||| |||| | ||||||||||    
T  28596901 aaaaagtgaaatgatatttgtacaaccactttgtgacaacttttt 28596945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 41966330 - 41966378
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  41966330 aagagaaatgatatttgtacaaccactttgtgacaattttttgacaact 41966378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 42276089 - 42276137
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||   ||||| |||| ||||||||||||    
T  42276089 aagagaaatgatatttgtacaactattttctaacaattttttgataact 42276137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 43213316 - 43213352
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaa 195  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  43213316 aaagagaaatgatatttgtacaaccactttctaacaa 43213352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 8395342 - 8395388
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  8395342 gagaaatgatatttgtacaaccactttctcacaactttttgacaact 8395388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 29383555 - 29383603
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  29383555 aagagaaatgatatttgtacaaccactttctgacaactttttgacaact 29383603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 32729884 - 32729927
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||||||  ||||| |||||||||    
T  32729884 aaaaagagaaatgatatttgtacaaccattttctgacaactttt 32729927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 2333365 - 2333411
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||| |||||||||| |||| | |||||||||||||||||    
T  2333365 gagaaatgataattgtacaaccactttattacaactttttgataact 2333411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 17835612 - 17835658
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  17835612 gagaaatgatatttgtacaacccttttctaacaactttttgacaact 17835658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 15666846 - 15666805
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||||||||  ||||| ||||||||||    
T  15666846 aagagaaatgatatttgtacaaccattttctgacaacttttt 15666805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 31517242 - 31517201
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  31517242 aagagaaatgatatttgtacaaccactttttgacaacttttt 31517201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 32457323 - 32457282
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||| |||| | ||||||||||||    
T  32457323 gagaaatgatatttgtacaaccactttgtgacaactttttga 32457282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 1897694 - 1897734
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaacttt 199  Q
    ||||||||||||||||||||||||| |||| | ||||||||    
T  1897694 aaagagaaatgatatttgtacaaccactttatgacaacttt 1897734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 3821376 - 3821424
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  3821376 aagagaaatgatatttgtacaaccactttattacaattttttgacaact 3821424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 8778945 - 8778897
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||  ||| | |||||||||||| ||||    
T  8778945 aagagaaatgatatttgtacaaccattttttaacaactttttgacaact 8778897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 19789149 - 19789101
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||  ||| | |||||||||||| ||||    
T  19789149 aagagaaatgatatttgtacaaccattttattacaactttttgacaact 19789101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 28965913 - 28965865
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||  ||| | |||||||||||| ||||    
T  28965913 aagagaaatgatatttgtacaaccattttgttacaactttttgacaact 28965865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 31480907 - 31480859
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||| ||||||||||||||||||| |||||| ||||| |||||| ||||    
T  31480907 aagataaatgatatttgtacaaccactttctgacaacattttgacaact 31480859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 31883377 - 31883337
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    |||||||||||||||||||||||| |||| | |||||||||    
T  31883377 aagagaaatgatatttgtacaaccactttttgacaactttt 31883337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 31436819 - 31436861
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  31436819 agagaaatgatatttgtacaaccactttctcacaactttttga 31436861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 1615034 - 1615075
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  1615034 aagagaaatgatatttgtacaaccactttctcacaacttttt 1615075  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 28253015 - 28253056
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  28253015 gagaaatgatatttgtacaaccactttctcacaactttttga 28253056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 39010814 - 39010860
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||    
T  39010814 gagaaatgatatttgtacagccactttctcacaactttttgacaact 39010860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 50226952 - 50226904
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  50226952 aagagaaatgatatttgtacaaccactttgtgacaactttttgacaact 50226904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 52233295 - 52233251
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||||||  |||||||||| |||||||    
T  52233295 aaagagaaatgatatttgtacaaccattttctcacaattttttga 52233251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 18541123 - 18541076
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  18541123 agagaaatgatatttgtacaaccattttctaacaactttttgacaact 18541076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 27810319 - 27810272
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  27810319 agagaaatgatatttgtacaaccaatttctaacaactttttgacaact 27810272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 36690644 - 36690597
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  36690644 agagaaatgatatttgtacaaccaatttctcacaattttttgacaact 36690597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 36706745 - 36706698
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||  |||||||||| ||||||| ||||    
T  36706745 agagaaatgatatttgtacaaccaatttctcacaattttttgacaact 36706698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 38913596 - 38913635
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttt 199  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  38913596 aagagaaatgatatctgtacaaccactttctcacaacttt 38913635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 45740615 - 45740572
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgata 205  Q
    |||||||||||||||||||||| |||| | ||||||||||||||    
T  45740615 gagaaatgatatttgtacaaccactttgtgacaactttttgata 45740572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 48872374 - 48872417
Alignment:
Q  157 aaaaagagaaatgatatttgtacaacctctttctcacaactttt 200  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  48872374 aaaaagagaaatgatatttgtacaaccactttatgacaactttt 48872417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 366653 - 366703
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||| ||||||| |||||| | |||||||||| ||||    
T  366653 aaaagagaaatgatatttatacaaccactttctgataactttttgacaact 366703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 3606165 - 3606119
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||  ||||| |||||||||||| ||||    
T  3606165 gagaaatgatatttgtacaaccaatttctaacaactttttgacaact 3606119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 8464584 - 8464543
Alignment:
Q  162 gagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    |||||||||||||||||||||| |||| | ||||||||||||    
T  8464584 gagaaatgatatttgtacaaccactttattacaactttttga 8464543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 12708086 - 12708131
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||||    
T  12708086 aaaagagaaatgatatttgtagaaccattttctaacaactttttga 12708131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 12713540 - 12713585
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||||    
T  12713540 aaaagagaaatgatatttgtagaaccattttctaacaactttttga 12713585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 12717631 - 12717676
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||||    
T  12717631 aaaagagaaatgatatttgtagaaccattttctaacaactttttga 12717676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 25061751 - 25061784
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctc 191  Q
    |||||||||||||||||||||||||| |||||||    
T  25061751 aaaagagaaatgatatttgtacaaccactttctc 25061784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 49590036 - 49589995
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaacttttt 201  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  49590036 aagagaaatgatatttgtacaaccactttattacaacttttt 49589995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 25302716 - 25302668
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | ||||| |||| ||||||    
T  25302716 aagagaaatgatatttgtacaaccactttgtgacaaccttttaataact 25302668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 31378483 - 31378531
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||| ||||  ||||| |||||||||||| ||||    
T  31378483 aagagaaatgatatttgtaaaaccgttttctgacaactttttgacaact 31378531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 44112452 - 44112500
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  44112452 aagagaaatgatatttgtacaaccactttattacaattttttgacaact 44112500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 3332 - 3294
Alignment:
Q  161 agagaaatgatatttgtacaacctctttctcacaacttt 199  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  3332 agagaaatgatatttgtacaaccactttctcacaacttt 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 219738 - 219689
Alignment:
Q  159 aaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  219738 aaagagaaatgatatttgtacaaccactttgtgacaactttttgacaact 219689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 91946 - 91989
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||    
T  91946 aagagaaataatatttgtacaaccactttctaacaactttttga 91989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 60467 - 60515
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    ||||||||||||||||||||||||  ||| | |||||||||||| ||||    
T  60467 aagagaaatgatatttgtacaaccattttattacaactttttgacaact 60515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 199262 - 199312
Alignment:
Q  158 aaaagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||||| |||| | |||| ||||||| ||||    
T  199262 aaaagagaaatgatatttgtacaaccactttattacaattttttgacaact 199312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 15604 - 15564
Alignment:
Q  163 agaaatgatatttgtacaacctctttctcacaactttttga 203  Q
    ||||||||||||||||||||| |||| | ||||||||||||    
T  15604 agaaatgatatttgtacaaccactttgtgacaactttttga 15564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 25701 - 25748
Alignment:
Q  160 aagagaaatgatatttgtacaacctctttctcacaactttttgataact 208  Q
    |||||||||||||||||||||||| |||| | |||| ||||||||||||    
T  25701 aagagaaatgatatttgtacaaccactttatgacaa-tttttgataact 25748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 263763 - 263727
Alignment:
Q  165 aaatgatatttgtacaacctctttctcacaacttttt 201  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  263763 aaatgatatttgtacaaccactttctaacaacttttt 263727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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