View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16034_high_18 (Length: 279)
Name: NF16034_high_18
Description: NF16034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16034_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 21 - 272
Target Start/End: Complemental strand, 21411366 - 21411115
Alignment:
| Q |
21 |
tattaaatttgtgttgtgcgaatctcaaatcatgtatcacataccattgcagtttgatcaatcaccaaaggccacgtataaattgctaccggaaaattag |
120 |
Q |
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| T |
21411366 |
tattaaatttgtgttgtgcgaatctcaaatcatgtatcacataccattgcagtttgatcaatcacaaaaagccacgtataaattgctaccggaaaattag |
21411267 |
T |
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| Q |
121 |
ggtccaaatagaggtttggtaaatgatgccaaaactccaataattggtttttgtctttcccattttggtcatcaacatgacttaaccagaacccttgttg |
220 |
Q |
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| T |
21411266 |
ggtccaaatagaggtttggtaaatgatgccaaaactccaataattggtttttgtctttcccattttggtcatcaacatgactcaaccagaacccttgttg |
21411167 |
T |
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| Q |
221 |
tcacattcatacacatgtttgagtagtttagtcattcatattcttcgacatg |
272 |
Q |
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||||||||||||||||||||||||||||||||||||||| || ||| ||||| |
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| T |
21411166 |
tcacattcatacacatgtttgagtagtttagtcattcatcttgttctacatg |
21411115 |
T |
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