View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16034_high_30 (Length: 205)

Name: NF16034_high_30
Description: NF16034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16034_high_30
NF16034_high_30
[»] chr8 (4 HSPs)
chr8 (36-154)||(3298072-3298190)
chr8 (23-75)||(3528786-3528838)
chr8 (24-92)||(37651670-37651738)
chr8 (22-75)||(3528011-3528065)
[»] chr1 (6 HSPs)
chr1 (16-154)||(39860985-39861123)
chr1 (23-92)||(38460678-38460747)
chr1 (24-92)||(38459410-38459478)
chr1 (22-93)||(26853091-26853163)
chr1 (24-93)||(26852439-26852509)
chr1 (24-60)||(38461073-38461109)
[»] chr3 (7 HSPs)
chr3 (23-92)||(30626471-30626540)
chr3 (22-78)||(36369887-36369943)
chr3 (23-86)||(37627724-37627787)
chr3 (60-140)||(25833954-25834034)
chr3 (24-86)||(37628425-37628488)
chr3 (25-71)||(43276381-43276428)
chr3 (125-154)||(25833790-25833819)
[»] chr5 (5 HSPs)
chr5 (27-92)||(12423279-12423344)
chr5 (21-93)||(43514469-43514542)
chr5 (24-75)||(4549253-4549304)
chr5 (27-93)||(43513821-43513888)
chr5 (22-73)||(12422518-12422570)
[»] scaffold0041 (1 HSPs)
scaffold0041 (60-154)||(59192-59287)
[»] chr7 (10 HSPs)
chr7 (23-90)||(2564737-2564804)
chr7 (60-154)||(40913808-40913903)
chr7 (24-83)||(22982783-22982842)
chr7 (24-77)||(47676787-47676840)
chr7 (22-57)||(37117406-37117441)
chr7 (28-91)||(11702266-11702329)
chr7 (32-93)||(34149490-34149552)
chr7 (32-93)||(34177572-34177634)
chr7 (32-92)||(47677478-47677539)
chr7 (102-145)||(37117475-37117519)
[»] chr4 (5 HSPs)
chr4 (102-149)||(46395950-46395997)
chr4 (21-93)||(44891720-44891793)
chr4 (27-93)||(44892374-44892441)
chr4 (33-74)||(3622392-3622433)
chr4 (23-93)||(11146291-11146362)
[»] chr2 (3 HSPs)
chr2 (23-77)||(45628543-45628597)
chr2 (22-77)||(44996391-44996446)
chr2 (24-78)||(45627810-45627865)
[»] chr6 (1 HSPs)
chr6 (24-78)||(13852974-13853029)


Alignment Details
Target: chr8 (Bit Score: 79; Significance: 4e-37; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 3298190 - 3298072
Alignment:
Q  36 ggtcacactccctaatacactctttaacacactccaataaaaaatagacacatcacccnnnnnnnngttcctttaacgtgcaaccggtacaaacaaaagt 135  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||        || |||||||| ||||||||||||||||||||||    
T  3298190 ggtcacactccctaacacactctttaacacactccaatcaaaaatagacacatcacccatttttttgtgcctttaacctgcaaccggtacaaacaaaagt 3298091  T
Q  136 actttaactttgaaaaaaa 154  Q
    |||||||||||||||||||    
T  3298090 actttaactttgaaaaaaa 3298072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 3528838 - 3528786
Alignment:
Q  23 tgagaaatgctagggtcacactccctaatacactctttaacacactccaataa 75  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  3528838 tgagaaatgctagggacacactccctaacacactctttgacacactccaataa 3528786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 37651670 - 37651738
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacacatcacc 92  Q
    ||||||||||| ||||||||||  ||| || |  |||||||||||||||| |||| |||||||||||||    
T  37651670 gagaaatgctaaggtcacactctttaacacgccttttaacacactccaattaaaattagacacatcacc 37651738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 3528011 - 3528065
Alignment:
Q  22 ttgagaaatgctagggtcacactccctaatacactc-tttaacacactccaataa 75  Q
    ||||| |||||||||| |||||||||||| |||||| ||| ||||||||||||||    
T  3528011 ttgaggaatgctagggacacactccctaacacactcttttgacacactccaataa 3528065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 2e-35; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 39861123 - 39860985
Alignment:
Q  16 gtaccattgagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacacatcac-ccnnnnnnnngttcctttaacgt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |         ||||||||||| |    
T  39861123 gtaccattgagaaatgctagggtcacactccctaatacactctttaacacacttcaat-taaaatagacacatcactcattttttttgttcctttaacct 39861025  T
Q  115 gcaaccggtacaaacaaaagtactttaactttgaaaaaaa 154  Q
     ||||| |||||||||||||||||||||||||||||||||    
T  39861024 ccaaccagtacaaacaaaagtactttaactttgaaaaaaa 39860985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 38460747 - 38460678
Alignment:
Q  23 tgagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacacatcacc 92  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  38460747 tgagaaatgctagggacacactccctaacacactctttaacacactccaataaaaattagccacatcacc 38460678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 38459410 - 38459478
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacacatcacc 92  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  38459410 gagaaatgctagggacacactccctaacacactctttaacacactccaataaaaattagccacatcacc 38459478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 26853163 - 26853091
Alignment:
Q  22 ttgagaaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||| | | ||||||||||    
T  26853163 ttgagaaatgctagggacacactccctaacacactcttttaacacactccaattaaaatttgccacatcaccc 26853091  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 26852439 - 26852509
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    ||||||||||||||  ||||||||||| |||||| |||||||||||||||| |||| | | ||||||||||    
T  26852439 gagaaatgctagggatacactccctaacacactcttttaacacactccaattaaaatttgccacatcaccc 26852509  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 38461109 - 38461073
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactcttt 60  Q
    |||||||||||||| |||||||||||| |||||||||    
T  38461109 gagaaatgctagggacacactccctaacacactcttt 38461073  T

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Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 30626471 - 30626540
Alignment:
Q  23 tgagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacacatcacc 92  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  30626471 tgagaaatgctagggtcacactccctaacacactctttaacacactccaataaaaattagccacatcacc 30626540  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 36369943 - 36369887
Alignment:
Q  22 ttgagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaa 78  Q
    |||||||||| |||||||||||||||||| | |||||||||||||||||||||||||    
T  36369943 ttgagaaatgttagggtcacactccctaacatactctttaacacactccaataaaaa 36369887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 37627724 - 37627787
Alignment:
Q  23 tgagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacac 86  Q
    ||||||||||||||| |||||||||||| |||||||||||||||| ||||| |||| |||||||    
T  37627724 tgagaaatgctagggacacactccctaacacactctttaacacacaccaatcaaaattagacac 37627787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 25834034 - 25833954
Alignment:
Q  60 taacacactccaataaaaaatagacacatcacccnnnnnnnngttcctttaacgtgcaaccggtacaaacaaaagtacttt 140  Q
    ||||||||||||||||| ||||||||||||||||        ||||||||||| |||||  ||||||||||||||||||||    
T  25834034 taacacactccaataaataatagacacatcacccatttttttgttcctttaacatgcaataggtacaaacaaaagtacttt 25833954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 37628488 - 37628425
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacac 86  Q
    |||||||||||||| |||||||||||| |||||| |||||||||| ||||| |||| |||||||    
T  37628488 gagaaatgctagggacacactccctaacacactcttttaacacacaccaatcaaaattagacac 37628425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 43276381 - 43276428
Alignment:
Q  25 agaaatgctagggtcacactccctaatacactc-tttaacacactcca 71  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  43276381 agaaatgctagggacacactccctaacacactcttttaacacactcca 43276428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 154
Target Start/End: Complemental strand, 25833819 - 25833790
Alignment:
Q  125 caaacaaaagtactttaactttgaaaaaaa 154  Q
    ||||||||||||||||||||||||||||||    
T  25833819 caaacaaaagtactttaactttgaaaaaaa 25833790  T

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Target: chr5 (Bit Score: 50; Significance: 8e-20; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 12423344 - 12423279
Alignment:
Q  27 aaatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacacatcacc 92  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  12423344 aaatgctaaggtcacactccctaacacactctttaacacactccaataaaaattagccacatcacc 12423279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 43514542 - 43514469
Alignment:
Q  21 attgagaaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||| | | ||||||||||    
T  43514542 attgagaaatgctagggacacactccctaacacactcttttaacacactccaattaaaatttgccacatcaccc 43514469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 4549304 - 4549253
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactctttaacacactccaataa 75  Q
    |||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  4549304 gagaaatgctagggacacactccctaacacactctttgacacactccaataa 4549253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 43513821 - 43513888
Alignment:
Q  27 aaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||| |||| | | ||||||||||    
T  43513821 aaatgctagggacacactccctaacacactcttttaacacactccaattaaaatttgccacatcaccc 43513888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 12422518 - 12422570
Alignment:
Q  22 ttgagaaatgctagggtcacactccctaatacactc-tttaacacactccaat 73  Q
    |||||||||| ||||| |||||||||||| |||||| ||| ||||||||||||    
T  12422518 ttgagaaatgttagggacacactccctaacacactcttttgacacactccaat 12422570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 59287 - 59192
Alignment:
Q  60 taacacactccaataaaaaatagacacatcacccnnnnnnnn-gttcctttaacgtgcaaccggtacaaacaaaagtactttaactttgaaaaaaa 154  Q
    ||||||||| ||||||||||||||||||||| ||         ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  59287 taacacacttcaataaaaaatagacacatcatcctttttttttgttcctttaacctgcaaccgatacaaacaaaagtactttaactttgaaaaaaa 59192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 2564737 - 2564804
Alignment:
Q  23 tgagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacacatca 90  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||| |||||||    
T  2564737 tgagaaatgctagggtcacactccctaacatactctttaacacactccaatagaaattagccacatca 2564804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 40913808 - 40913903
Alignment:
Q  60 taacacactccaataaaaaatagacacatcacccnnnnnnnn-gttcctttaacgtgcaaccggtacaaacaaaagtactttaactttgaaaaaaa 154  Q
    ||||||||| ||||||||||||||||||||| ||         ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  40913808 taacacacttcaataaaaaatagacacatcatcctttttttttgttcctttaacctgcaaccgatacaaacaaaagtactttaactttgaaaaaaa 40913903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 22982783 - 22982842
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactctttaacacactccaataaaaaataga 83  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  22982783 gagaaatgccagggtcacactccctaacacactctttaacacactccaatagaaattaga 22982842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 47676787 - 47676840
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactctttaacacactccaataaaa 77  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  47676787 gagaaatgctagggacacactccctaacacactctctaacacactccaataaaa 47676840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 37117406 - 37117441
Alignment:
Q  22 ttgagaaatgctagggtcacactccctaatacactc 57  Q
    ||||||||||||||||||||||||||||||||||||    
T  37117406 ttgagaaatgctagggtcacactccctaatacactc 37117441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 11702266 - 11702329
Alignment:
Q  28 aatgctagggtcacactccctaatacactctttaacacactccaataaaaaatagacacatcac 91  Q
    |||||||||| ||||| | |||| ||||||||| |||||||||||| |||| ||| ||||||||    
T  11702266 aatgctagggacacaccctctaacacactctttgacacactccaatgaaaattagccacatcac 11702329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 34149490 - 34149552
Alignment:
Q  32 ctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    |||||| ||||| | |||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  34149490 ctagggacacaccctctaacacactcatttaacacactccaataaaaaattgccacatcaccc 34149552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 34177634 - 34177572
Alignment:
Q  32 ctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    |||||| ||||| | |||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  34177634 ctagggacacaccctctaacacactcatttaacacactccaataaaaaattgccacatcaccc 34177572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 47677539 - 47677478
Alignment:
Q  32 ctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcacc 92  Q
    |||||| |||||||||||| |||||| |||||||||||||||| |||| | | |||||||||    
T  47677539 ctagggacacactccctaacacactcttttaacacactccaattaaaatttgccacatcacc 47677478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 37117475 - 37117519
Alignment:
Q  102 gttcctttaacgtgcaaccggtacaaacaa-aagtactttaactt 145  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||    
T  37117475 gttcctttaacctgcaaccggtacaaacaacaagtgctttaactt 37117519  T

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Target: chr4 (Bit Score: 44; Significance: 3e-16; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 46395950 - 46395997
Alignment:
Q  102 gttcctttaacgtgcaaccggtacaaacaaaagtactttaactttgaa 149  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46395950 gttcctttaacctgcaaccggtacaaacaaaagtactttaactttgaa 46395997  T

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Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 44891720 - 44891793
Alignment:
Q  21 attgagaaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||||||||||| |||| | | ||||||||||    
T  44891720 attgagaaatgctagggacacactccctaacacactcttttaacacactccaattaaaatttgccacatcaccc 44891793  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 44892441 - 44892374
Alignment:
Q  27 aaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||| |||| | | ||||||||||    
T  44892441 aaatgctagggacacactccctaacacactcttttaacacactccaattaaaatttgccacatcaccc 44892374  T

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Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 3622433 - 3622392
Alignment:
Q  33 tagggtcacactccctaatacactctttaacacactccaata 74  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  3622433 tagggtcacactctctaatacaccctttaacacactccaata 3622392  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 11146291 - 11146362
Alignment:
Q  23 tgagaaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaaatagacacatcaccc 93  Q
    ||||||||||||||  |||||||||||| |||||| ||||||||||| |||| |||| | | ||||||||||    
T  11146291 tgagaaatgctaggaacacactccctaacacactcttttaacacacttcaattaaaatttgccacatcaccc 11146362  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 45628597 - 45628543
Alignment:
Q  23 tgagaaatgctagggtcacactccctaatacactctttaacacactccaataaaa 77  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  45628597 tgagaaatgctagggacacactccctaacacactctctaacacactccaataaaa 45628543  T

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Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 44996446 - 44996391
Alignment:
Q  22 ttgagaaatgctagggtcacactccctaatacactctttaacacactccaataaaa 77  Q
    |||||||||||||| | |||||||||||| ||||||| ||||||||||||||||||    
T  44996446 ttgagaaatgctagagacacactccctaacacactctctaacacactccaataaaa 44996391  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 45627810 - 45627865
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaa 78  Q
    |||||||||||||| || ||||||||| |||||| |||||||||||||||| ||||    
T  45627810 gagaaatgctagggacaaactccctaacacactcttttaacacactccaattaaaa 45627865  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 13853029 - 13852974
Alignment:
Q  24 gagaaatgctagggtcacactccctaatacactc-tttaacacactccaataaaaa 78  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  13853029 gagaaatgctagggtcacactccctaacacactcttttaacacacaccaatcaaaa 13852974  T

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