View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16034_low_22 (Length: 253)
Name: NF16034_low_22
Description: NF16034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16034_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 9 - 241
Target Start/End: Original strand, 7553430 - 7553662
Alignment:
| Q |
9 |
agtagcaaaggtaaaagaattttaaagtatattagtagtttttatacaagttaatgtagcatgtatgccaatatggtggaatatttttggcctttaaaat |
108 |
Q |
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|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
7553430 |
agtaacaaaggtaaaagagttttaaagtatattagtagtttttatacaagttaatgtagcatgtatgccaatatggtggaataattttggcctttaaaat |
7553529 |
T |
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| Q |
109 |
gttgcaaaagatgcacagaagaaactggcagaactgtagttagagattttgaaagcatgtagtcatgtggactccttttatttcaaaagcctgtcagcta |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7553530 |
gttgcaaaagatgcacagaagaaactggcagaactgtagttagagattttgaaagcatgtagtcatgtggactccttttatttcaaaagcctgttagcta |
7553629 |
T |
|
| Q |
209 |
taaaaatgaggtgctaatttcttgagtattatc |
241 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
7553630 |
taaaaatgaggtgctaatttcttgagtattatc |
7553662 |
T |
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