View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16035_low_4 (Length: 229)

Name: NF16035_low_4
Description: NF16035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16035_low_4
NF16035_low_4
[»] chr3 (26 HSPs)
chr3 (115-213)||(46941054-46941152)
chr3 (115-213)||(42100689-42100787)
chr3 (115-213)||(54237097-54237195)
chr3 (114-213)||(42394420-42394519)
chr3 (115-210)||(45126932-45127027)
chr3 (115-213)||(40808866-40808964)
chr3 (115-213)||(24688403-24688501)
chr3 (115-213)||(25413682-25413780)
chr3 (115-213)||(47191027-47191124)
chr3 (115-213)||(53273685-53273783)
chr3 (115-213)||(54246149-54246247)
chr3 (114-213)||(40480749-40480848)
chr3 (115-213)||(36150131-36150229)
chr3 (116-213)||(27748565-27748662)
chr3 (116-213)||(53581859-53581956)
chr3 (115-202)||(25996269-25996356)
chr3 (118-210)||(29558238-29558330)
chr3 (115-213)||(9434125-9434223)
chr3 (115-213)||(4190266-4190364)
chr3 (116-199)||(1078229-1078311)
chr3 (115-213)||(10457893-10457991)
chr3 (156-213)||(52629870-52629927)
chr3 (115-213)||(52627978-52628076)
chr3 (115-213)||(34791830-34791928)
chr3 (151-213)||(51249345-51249407)
chr3 (126-207)||(11064729-11064810)
[»] chr1 (22 HSPs)
chr1 (115-213)||(43571087-43571185)
chr1 (115-213)||(5489777-5489875)
chr1 (115-213)||(37814779-37814877)
chr1 (116-213)||(7447828-7447924)
chr1 (116-213)||(4401329-4401427)
chr1 (115-213)||(48498963-48499061)
chr1 (116-211)||(2497565-2497660)
chr1 (115-213)||(24769500-24769598)
chr1 (115-213)||(750306-750404)
chr1 (115-213)||(50448261-50448359)
chr1 (115-213)||(38335919-38336017)
chr1 (115-213)||(44112678-44112776)
chr1 (115-213)||(48119629-48119727)
chr1 (115-213)||(23989524-23989623)
chr1 (115-213)||(35003295-35003393)
chr1 (115-213)||(46168384-46168482)
chr1 (156-210)||(4888085-4888139)
chr1 (115-213)||(41065154-41065252)
chr1 (115-213)||(45639733-45639831)
chr1 (115-213)||(45427746-45427844)
chr1 (115-207)||(38113202-38113294)
chr1 (115-194)||(26585463-26585542)
[»] scaffold0119 (1 HSPs)
scaffold0119 (115-213)||(686-784)
[»] chr8 (26 HSPs)
chr8 (115-213)||(11582767-11582865)
chr8 (115-213)||(36743484-36743582)
chr8 (116-213)||(42295197-42295294)
chr8 (115-213)||(30660743-30660841)
chr8 (115-213)||(5754904-5755002)
chr8 (115-213)||(29705363-29705461)
chr8 (116-213)||(29800951-29801048)
chr8 (116-213)||(26125637-26125734)
chr8 (116-211)||(20148762-20148857)
chr8 (115-213)||(42197436-42197534)
chr8 (122-213)||(31384672-31384763)
chr8 (114-213)||(45397316-45397415)
chr8 (115-213)||(2165964-2166062)
chr8 (115-213)||(2546997-2547095)
chr8 (116-210)||(42699259-42699353)
chr8 (116-213)||(30912563-30912660)
chr8 (115-213)||(34304789-34304887)
chr8 (115-213)||(1375543-1375641)
chr8 (115-213)||(18066719-18066817)
chr8 (115-213)||(35181517-35181615)
chr8 (116-213)||(3743773-3743870)
chr8 (156-213)||(9241594-9241651)
chr8 (116-213)||(33629994-33630091)
chr8 (115-207)||(16603633-16603725)
chr8 (151-213)||(40528635-40528697)
chr8 (115-147)||(28977147-28977179)
[»] chr7 (29 HSPs)
chr7 (115-213)||(24001013-24001111)
chr7 (115-213)||(42538432-42538530)
chr7 (115-213)||(35069722-35069820)
chr7 (115-213)||(42972853-42972951)
chr7 (116-213)||(43343625-43343722)
chr7 (116-213)||(44416935-44417032)
chr7 (116-211)||(44326180-44326275)
chr7 (115-213)||(5015396-5015494)
chr7 (115-213)||(5810925-5811023)
chr7 (116-213)||(10573751-10573848)
chr7 (115-213)||(45326021-45326119)
chr7 (136-213)||(32029818-32029895)
chr7 (115-213)||(9216303-9216400)
chr7 (117-210)||(26898406-26898499)
chr7 (134-213)||(27393261-27393340)
chr7 (116-213)||(4638200-4638297)
chr7 (115-202)||(40236920-40237007)
chr7 (116-213)||(16180358-16180454)
chr7 (115-213)||(41861675-41861775)
chr7 (115-207)||(5194238-5194330)
chr7 (130-213)||(38160580-38160663)
chr7 (115-207)||(43317444-43317536)
chr7 (115-213)||(31513288-31513386)
chr7 (113-213)||(31408634-31408734)
chr7 (115-181)||(39998409-39998475)
chr7 (115-213)||(33384871-33384970)
chr7 (115-213)||(24280597-24280695)
chr7 (115-213)||(27535232-27535330)
chr7 (115-167)||(47279744-47279796)
[»] chr6 (18 HSPs)
chr6 (115-213)||(9698334-9698432)
chr6 (115-213)||(26670010-26670108)
chr6 (115-213)||(7273336-7273434)
chr6 (115-213)||(13743222-13743320)
chr6 (115-213)||(13748722-13748820)
chr6 (115-210)||(7367550-7367645)
chr6 (115-213)||(26466800-26466898)
chr6 (115-213)||(30014344-30014442)
chr6 (115-213)||(3213401-3213499)
chr6 (115-213)||(7292748-7292846)
chr6 (115-213)||(21279930-21280028)
chr6 (116-210)||(24203991-24204085)
chr6 (115-213)||(21293678-21293776)
chr6 (116-213)||(30735984-30736081)
chr6 (115-213)||(33242404-33242502)
chr6 (116-213)||(27441544-27441641)
chr6 (115-213)||(31109223-31109321)
chr6 (115-213)||(33253914-33254012)
[»] chr5 (14 HSPs)
chr5 (115-213)||(2614650-2614748)
chr5 (115-213)||(22512306-22512404)
chr5 (115-213)||(33801470-33801568)
chr5 (115-213)||(41334664-41334762)
chr5 (115-213)||(7617134-7617232)
chr5 (115-213)||(18033983-18034081)
chr5 (116-213)||(5256997-5257094)
chr5 (115-213)||(38470580-38470678)
chr5 (115-213)||(32473395-32473493)
chr5 (115-189)||(33855068-33855142)
chr5 (116-194)||(25915008-25915085)
chr5 (122-213)||(39122434-39122524)
chr5 (115-213)||(17208075-17208173)
chr5 (115-213)||(30622720-30622817)
[»] chr4 (38 HSPs)
chr4 (115-213)||(33703142-33703240)
chr4 (115-213)||(35017734-35017831)
chr4 (115-210)||(27864565-27864660)
chr4 (115-213)||(1771267-1771365)
chr4 (115-213)||(27550310-27550408)
chr4 (116-213)||(43949802-43949900)
chr4 (115-213)||(55966347-55966445)
chr4 (116-213)||(27893843-27893940)
chr4 (115-213)||(23035981-23036079)
chr4 (115-213)||(25051694-25051792)
chr4 (115-213)||(27316714-27316812)
chr4 (116-213)||(39631102-39631200)
chr4 (116-213)||(43735744-43735841)
chr4 (117-213)||(23204779-23204875)
chr4 (115-210)||(48463454-48463549)
chr4 (115-213)||(12496957-12497055)
chr4 (115-213)||(28982823-28982921)
chr4 (116-213)||(43514687-43514784)
chr4 (116-213)||(31680904-31681001)
chr4 (115-213)||(28988474-28988572)
chr4 (115-202)||(41878407-41878494)
chr4 (115-213)||(55272377-55272475)
chr4 (115-213)||(45490314-45490412)
chr4 (115-213)||(17619153-17619251)
chr4 (115-213)||(41847972-41848070)
chr4 (156-213)||(51512266-51512323)
chr4 (115-213)||(711961-712059)
chr4 (115-213)||(21687007-21687105)
chr4 (115-213)||(32728358-32728456)
chr4 (116-213)||(38851515-38851612)
chr4 (116-208)||(3756252-3756344)
chr4 (116-202)||(35037007-35037093)
chr4 (167-213)||(46412470-46412516)
chr4 (115-213)||(48435580-48435678)
chr4 (115-194)||(960890-960969)
chr4 (115-194)||(49229684-49229763)
chr4 (152-213)||(19879992-19880053)
chr4 (116-213)||(41327544-41327641)
[»] chr2 (29 HSPs)
chr2 (115-213)||(30838633-30838731)
chr2 (114-213)||(19047157-19047256)
chr2 (115-213)||(1750415-1750513)
chr2 (115-213)||(43335764-43335862)
chr2 (116-213)||(43490402-43490499)
chr2 (115-213)||(12302254-12302352)
chr2 (115-213)||(16096748-16096846)
chr2 (116-208)||(33229303-33229396)
chr2 (115-213)||(4764727-4764825)
chr2 (113-213)||(34817777-34817877)
chr2 (115-213)||(12415461-12415559)
chr2 (115-213)||(12427521-12427619)
chr2 (115-213)||(43114558-43114656)
chr2 (115-213)||(13780736-13780834)
chr2 (156-210)||(42849862-42849916)
chr2 (116-213)||(11825655-11825752)
chr2 (116-213)||(41281975-41282072)
chr2 (115-213)||(16803969-16804067)
chr2 (115-213)||(16843251-16843349)
chr2 (116-208)||(8896589-8896681)
chr2 (130-213)||(4451951-4452034)
chr2 (116-203)||(7070418-7070505)
chr2 (152-213)||(39149293-39149354)
chr2 (116-199)||(6518484-6518566)
chr2 (115-207)||(18491706-18491798)
chr2 (115-208)||(42026768-42026863)
chr2 (115-213)||(966835-966933)
chr2 (115-213)||(34895742-34895840)
chr2 (115-147)||(42849913-42849945)
[»] scaffold0038 (1 HSPs)
scaffold0038 (114-213)||(112655-112754)
[»] scaffold0385 (1 HSPs)
scaffold0385 (115-213)||(11252-11350)
[»] scaffold0187 (2 HSPs)
scaffold0187 (115-213)||(14189-14287)
scaffold0187 (115-213)||(24517-24615)
[»] scaffold0157 (1 HSPs)
scaffold0157 (115-213)||(23422-23520)
[»] scaffold0003 (1 HSPs)
scaffold0003 (116-213)||(45720-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (115-213)||(35457-35555)


Alignment Details
Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 46941054 - 46941152
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46941054 gaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 46941152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 42100689 - 42100787
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42100689 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42100787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 54237097 - 54237195
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 54237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 42394519 - 42394420
Alignment:
Q  114 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42394519 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42394420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 45127027 - 45126932
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    ||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45127027 gaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 45126932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 40808866 - 40808964
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40808866 gaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40808964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 24688501 - 24688403
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| |||||   |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24688501 gaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24688403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 25413682 - 25413780
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||  |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  25413682 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 25413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 47191124 - 47191027
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  47191124 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccc-atgtattagagatattttgataagttcatctcacaaccacactttatctt 47191027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 53273783 - 53273685
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  53273783 gaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatctt 53273685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 54246247 - 54246149
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  54246247 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatctt 54246149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 40480749 - 40480848
Alignment:
Q  114 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||| ||||||||| ||   | ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40480749 agaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40480848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 36150131 - 36150229
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||| | ||||||||| |||| | |||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  36150131 gaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatctt 36150229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 27748565 - 27748662
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| | ||||||| |||| |||||| ||||||  ||||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatctt 27748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 53581956 - 53581859
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||  |||||||| ||||   ||||||||| || ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatctt 53581859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 25996269 - 25996356
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaacca 202  Q
    |||||||||||||||||| |||||| || ||||||| |||||||||||||| ||||| ||| |||||||||| ||||||| |||||||    
T  25996269 gaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaacca 25996356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 29558330 - 29558238
Alignment:
Q  118 aatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||| || ||||||| |||| ||||||| ||||||| |||| |||| |||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcacaatcacattttat 29558238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 9434125 - 9434223
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctc-attgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| ||| ||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||| ||||    
T  9434125 gaaaatgttacatgaacaccctttaatcataca-ctctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 9434223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 4190364 - 4190266
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||  ||||||||| ||||||||||||| ||||||| ||||||| ||||| ||||    
T  4190364 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctt 4190266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 1078229 - 1078311
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaa 199  Q
    ||||||||||||||||| ||||||||||| || |||||||||||||  |||||||| ||||||||| ||| |||||||| ||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtatta-ggatatttttgtaggttcatctcacaa 1078311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 10457991 - 10457893
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| | |||| || |||| |  ||||||||||||||| |||| |||||||||||||| || |||| ||||||| ||||| ||||    
T  10457991 gaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctt 10457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 52629870 - 52629927
Alignment:
Q  156 tacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  52629870 tacaccctatgtattaaggatatttttgtaagttcatctcacaaccacactttatctt 52629927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 52628076 - 52627978
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||| |||||| |||||| || ||||||  |||||||||| |||| |||| | |||||||||||| ||||||| |||| || ||||| ||||    
T  52628076 gaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctt 52627978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 34791830 - 34791928
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  |||||| ||| |||| |||||||| |||||  ||| ||||||| ||||||| ||||| ||||    
T  34791830 gaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctt 34791928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 51249345 - 51249407
Alignment:
Q  151 cattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||| |||||| |||| |||| |||||||||||||| ||||||| ||||||||||||| ||||    
T  51249345 cattatacacctcatgcattaaggatattttggtaaattcatctcacaaccacactttctctt 51249407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 11064810 - 11064729
Alignment:
Q  126 atgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactt 207  Q
    ||||||||| ||||||| |||| |||||||||||||| |||  |||| ||||||||| | | ||||||| | || |||||||    
T  11064810 atgaacatcatttattcatacacctcattgtacaccctatgctttagagatattttgattaattcatctcataatcacactt 11064729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 7e-42; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 43571185 - 43571087
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43571185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43571087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 5489777 - 5489875
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5489777 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5489875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 37814779 - 37814877
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||||||||||||||    
T  37814779 gaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 7447828 - 7447924
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  ||||||||| ||||||||||| ||||||||||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctcacaaccacactttatctt 7447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 4401329 - 4401427
Alignment:
Q  116 aaaatgttacatgaaca-tcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||| |||||||||| || ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatctt 4401427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 48499061 - 48498963
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||  ||||||| |||||   ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48499061 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 48498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 2497660 - 2497565
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatc 211  Q
    |||||||||||| |||| | ||||||| |||||  ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacactttatc 2497565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 24769598 - 24769500
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||| |||||||| | |||||| |||||   |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||    
T  24769598 gaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttcttatcacaaccacactttatctt 24769500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 750404 - 750306
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||| |||||| ||||  |||||||| | ||||||||||||||||||| |||||||||||| ||| ||||||| | ||||||||||||||||    
T  750404 gaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatctt 750306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 50448359 - 50448261
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||  ||||||| |||||   |||||||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  50448359 gaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatcttacaaccacattttatctt 50448261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 38335919 - 38336017
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| || |||||||| |||||| |||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  38335919 gaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 38336017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 44112678 - 44112776
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||| ||||    
T  44112678 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 44112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 48119629 - 48119727
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  48119629 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 48119727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 23989623 - 23989524
Alignment:
Q  115 gaaaatgttacatgaacatccttt-attcctacatctca-ttgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatct 212  Q
    |||||||||||||||||| ||||| |||| |||| |||| ||||| |||| ||||||||||||||||||||||| || |||| |||||||||||||||||    
T  23989623 gaaaatgttacatgaacacccttttattcataca-ctcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatct 23989525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 35003295 - 35003393
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||  |||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  35003295 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctctt 35003393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 46168384 - 46168482
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || || |||  ||||||||||| ||| |||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  46168384 gaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 46168482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 4888085 - 4888139
Alignment:
Q  156 tacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  4888085 tacatcccatgtattagggatattttggtaagtttatctcacaaccacactttat 4888139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 41065154 - 41065252
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |   |||||||||||||| |||||||  |||||||||| ||||||| ||||||| ||||| ||||    
T  41065154 gaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctt 41065252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 45639831 - 45639733
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||  ||||| || ||||||  ||||||||||||||  |||| |||||||||||||| ||||||| |||| || ||||| ||||    
T  45639831 gaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctt 45639733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 45427844 - 45427746
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||| | | |||| || |||| |  ||||||||| ||||| |||||||| |||||||||| ||||||| ||||||| ||||| ||||    
T  45427844 gaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 45427746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 38113294 - 38113202
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactt 207  Q
    |||||||||| ||||||| |||||| || |||| |  ||||||||||||||| ||||  || |||||||||| ||||||| ||||||| ||||    
T  38113294 gaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatactt 38113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 194
Target Start/End: Original strand, 26585463 - 26585542
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatct 194  Q
    |||||||||| |||||||| ||||| || ||||    ||||||||||||||| |||| ||||||||| |||| |||||||    
T  26585463 gaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatct 26585542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 686 - 784
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  686 gaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 11582767 - 11582865
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11582767 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 11582865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 36743582 - 36743484
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36743582 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 36743484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 42295197 - 42295294
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42295294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 30660841 - 30660743
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30660841 gaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatctt 30660743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 5754904 - 5755002
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| | |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  5754904 gaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatctt 5755002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 29705363 - 29705461
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  29705363 gaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 29705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 29801048 - 29800951
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 29800951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 26125637 - 26125734
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| |||| ||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 20148762 - 20148857
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatc 211  Q
    |||||||||||| |||| ||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatc 20148857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 42197534 - 42197436
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| | |||||||||||| | ||||| |||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42197534 gaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 31384672 - 31384763
Alignment:
Q  122 ttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||| ||||||||| |||||   |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatctt 31384763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 45397316 - 45397415
Alignment:
Q  114 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| |||||| |||||||||||||| | |||| ||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  45397316 agaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaaccacaatttatctt 45397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 2166062 - 2165964
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||| ||||||||||| | |||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  2166062 gaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 2546997 - 2547095
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||  ||||||| |||||   ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  2546997 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatctt 2547095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 42699259 - 42699353
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||  |||||||| ||||||||| |||||||||||| |||||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccacactttat 42699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 30912660 - 30912563
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||  |||||||||||| ||||||||||||||||||| |||||| ||| |||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaaccgcaccttatctt 30912563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 34304789 - 34304887
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||||||||| || |||| |  ||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||| ||||    
T  34304789 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 34304887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 1375543 - 1375641
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||| ||||||||||| | ||||||| |||| |  |||||||||||||| |||||||||||||||||||| || |||| ||||| ||||||||||||    
T  1375543 gaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatctt 1375641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 18066817 - 18066719
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||||   |||||||| ||||||||||||||||||||| |||| ||||||| ||||||| ||||| ||||    
T  18066817 gaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctt 18066719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 35181517 - 35181615
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||| ||||    
T  35181517 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 35181615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 3743773 - 3743870
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||| |||  ||| ||||||||| | | || |||| |||||||||| ||||| | |||||||| ||||||||||| ||||||||||||||||||    
T  3743773 aaaatgttccatatacaccctttattcatccctcccattatacaccccatatattaagtatattttgataagttcatctcacaaccacactttatctt 3743870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 9241594 - 9241651
Alignment:
Q  156 tacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  9241594 tacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatctt 9241651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 33630091 - 33629994
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||| ||||| |||||| || |||| |||||||||||||| ||| |||||||| ||||| |||| ||||||| ||||| | ||||| ||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctt 33629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 16603725 - 16603633
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactt 207  Q
    |||||||||||||| ||| |||||| || |||| || ||| ||||||||||| ||||  || |||||||||| ||||||| ||||||| ||||    
T  16603725 gaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatactt 16603633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 40528697 - 40528635
Alignment:
Q  151 cattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||| ||||||||| |||||| ||| || |||| ||||||||||||| ||||    
T  40528697 cattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttctctt 40528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 28977147 - 28977179
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctaca 147  Q
    |||||||||||||||||| ||||||||||||||    
T  28977147 gaaaatgttacatgaacaccctttattcctaca 28977179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 24001111 - 24001013
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24001111 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24001013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 42538530 - 42538432
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42538530 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42538432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 35069722 - 35069820
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35069722 gaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 35069820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 42972853 - 42972951
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||| |||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42972853 gaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacattttatctt 42972951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 43343722 - 43343625
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||| |||||| ||||| |  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 43343625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 44417032 - 44416935
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||| |||||| ||||| |  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 44416935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 44326180 - 44326275
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatc 211  Q
    |||||||||||| |||| ||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatc 44326275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 5015396 - 5015494
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||  ||||||| |||||   ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5015396 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5015494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 5811023 - 5810925
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||| || |||||||||||||| | |||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5811023 gaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatctt 5810925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 10573751 - 10573848
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| |||| ||||||||| ||||||  |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatctt 10573848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 45326021 - 45326119
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||| |||||||| |||| | ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  45326021 gaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatctt 45326119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 32029895 - 32029818
Alignment:
Q  136 tttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  32029895 tttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatctt 32029818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 9216303 - 9216400
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||| |||  ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  9216303 gaaaatgttacatgaacaccctttattcctatatcctattgtacaccc-atgcattagagatattttggtaagttcatctcacaaccacattttatctt 9216400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 26898499 - 26898406
Alignment:
Q  117 aaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    |||||||||||||||| | ||||||| |||| |  ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacactttat 26898406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 27393340 - 27393261
Alignment:
Q  134 cctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||  ||||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27393340 cctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 27393261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 4638297 - 4638200
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctca-ttgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| | ||||||| |||| |||| ||||||||||||| ||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcataca-ctcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatctt 4638200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 40236920 - 40237007
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaacca 202  Q
    |||||||||||||||||| |||||| || ||||||  ||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  40236920 gaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaacca 40237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 16180454 - 16180358
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| |||| | |||||||||||| | |||||||||||||| ||||||   |||||||||||| ||||||| ||||||||||||||||||    
T  16180454 aaaatgttacatcaacaccatttattcctacacc-cattgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatctt 16180358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 41861675 - 41861775
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtatta--gggatattttggtaagttcatctgacaaccacactttatct 212  Q
    |||||||||||||||||| ||||||||| |||| |  ||| ||||||| ||||||||  | |||||||||||||||| |||| |||||||||||||||||    
T  41861675 gaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcacaaccacactttatct 41861774  T
Q  213 t 213  Q
    |    
T  41861775 t 41861775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 5194330 - 5194238
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactt 207  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||| |||| ||| |||||||||| ||| ||||||| |||| |||||||    
T  5194330 gaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaatcacactt 5194238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 38160663 - 38160580
Alignment:
Q  130 acatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||| |||||| ||||   ||||||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||    
T  38160663 acatcccttattcttacactccattgtacaccccatgtattagggatattttagtaacttcatctcacaactacactttatctt 38160580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 43317444 - 43317536
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactt 207  Q
    |||||||||||||||||| | ||||||| |||| ||||||||||| || |||  |||||||||||||| ||| ||||||| |||| |||||||    
T  43317444 gaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacactt 43317536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 31513288 - 31513386
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||  ||||| || |||| |  |||||| |||||||| |||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  31513288 gaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 31513386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 31408734 - 31408634
Alignment:
Q  113 gagaaaatgttacatgaacatcctttattcctacatctc-attgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatc 211  Q
    |||||||||||||||||||| |||||| || |||| ||| |||||||| |||||| |||| |||||||||||||| ||||| | ||||||| ||||| ||    
T  31408734 gagaaaatgttacatgaacaccctttaatcataca-ctctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctc 31408636  T
Q  212 tt 213  Q
    ||    
T  31408635 tt 31408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 39998409 - 39998475
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatttt 181  Q
    ||||||||||||||||||   |||| || ||||||  ||||||||||||||||||||||||||||||    
T  39998409 gaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 33384871 - 33384970
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctc-attgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||||| |||| || |||| | | |||||| || ||||| |||||||| |||||||||| ||||||| |||| || ||||| ||||    
T  33384871 gaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctctt 33384970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 24280695 - 24280597
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||| |||||| ||||||||| |||| |  ||| |||| |||||| | |||  |||||||||||| ||||||| |||| |||||||| ||||    
T  24280695 gaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctctt 24280597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 27535330 - 27535232
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctaca-tctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| ||| ||||||||| |||||| |||  || |||||||||| ||||||| ||||| | ||||| ||||    
T  27535330 gaaaatgttacatgaacaccctttaatcatacactct-attgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctt 27535232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 47279796 - 47279744
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgt 167  Q
    |||||| |||||| || | ||||||||| |||||| |||||||||||||||||    
T  47279796 gaaaatattacataaataccctttattcatacatcccattgtacaccccatgt 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 9698432 - 9698334
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9698432 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 9698334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 26670108 - 26670010
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26670108 gaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 7273434 - 7273336
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  7273434 gaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttatctt 7273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 13743320 - 13743222
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| | ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13743320 gaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 13748820 - 13748722
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| | ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13748820 gaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 7367550 - 7367645
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    |||||||||| ||||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7367550 gaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacactttat 7367645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 26466800 - 26466898
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| |||||||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  26466800 gaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatctt 26466898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 30014344 - 30014442
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  30014344 gaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 3213401 - 3213499
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||| ||||||||||    
T  3213401 gaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatctt 3213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 7292748 - 7292846
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| ||||| | ||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7292748 gaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7292846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 21279930 - 21280028
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| ||||||  ||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  21279930 gaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatctt 21280028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 24204085 - 24203991
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    ||||||||||||||||| | |||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttat 24203991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 21293776 - 21293678
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| ||||||||| ||||| ||| |||||||||||||||||| |||||||||||||| ||||| | ||||||||||||||||||    
T  21293776 gaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 21293678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 30735984 - 30736081
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||   |||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatctt 30736081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 33242404 - 33242502
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| | |||| || |||| || |||||||||||||||||||| ||| |||||||||| ||||||| |||| || ||||| ||||    
T  33242404 gaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctt 33242502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 27441544 - 27441641
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| |||||| || |||| |  |||||||| || |||||||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 27441641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 31109321 - 31109223
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||||| |||| ||||||||||| | ||||||||||||| ||| |||| || || |||||| ||| ||||    
T  31109321 gaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttctctt 31109223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 33253914 - 33254012
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| | |||| ||  ||| |  ||||||||||||||| |||||||| || ||||||| ||||||| |||| || ||||||||||    
T  33253914 gaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 33254012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 2614748 - 2614650
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2614748 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 2614650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 22512306 - 22512404
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| ||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22512306 gaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 22512404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 33801470 - 33801568
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  33801470 gaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 33801568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 41334762 - 41334664
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| ||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41334762 gaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 7617134 - 7617232
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| ||||||||| ||||   |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7617134 gaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7617232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 18033983 - 18034081
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| ||||||||||||||   |||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  18033983 gaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 18034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 5256997 - 5257094
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 5257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 38470580 - 38470678
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| ||||||||| |||||  ||||||||||||||||||||| |||||||||||||| ||||| | |||| |||||||||||||    
T  38470580 gaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatctt 38470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 32473493 - 32473395
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| || |||||||||| |||| ||||||||||||||||||| ||||||| ||||||| ||||| ||||    
T  32473493 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctctt 32473395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 33855142 - 33855068
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagtt 189  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| | |||||||||||||    
T  33855142 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagtt 33855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 25915085 - 25915008
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatct 194  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| | ||||||| ||| ||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtatta-gaatatttttgtaggttcatct 25915008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 39122524 - 39122434
Alignment:
Q  122 ttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||| | ||||||| ||||||| |||  |||||| |||||||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  39122524 ttacatgaacaccttttattcatacatctaattagacaccc-atgtattaggaatattttggtaaattcatctcacaactacactttatctt 39122434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 17208075 - 17208173
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||| |||||| |||||| || ||||  | ||||||||||||||| |||| ||| |||||||||| ||||||| ||||||| ||||| ||||    
T  17208075 gaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctt 17208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 30622817 - 30622720
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||||||||| || |||| |  |||||| | |||||| |||| |||||||||||||| || |||| ||||||| ||||| ||||    
T  30622817 gaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcacaaccatactttctctt 30622720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 33703142 - 33703240
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33703142 gaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 33703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 35017734 - 35017831
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  35017734 gaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcacaaccacactttatctt 35017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 27864565 - 27864660
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    ||||||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27864565 gaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttat 27864660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 1771365 - 1771267
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||    
T  1771365 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaaccacattttatctt 1771267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 27550310 - 27550408
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| |||||   ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27550310 gaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatctt 27550408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 43949900 - 43949802
Alignment:
Q  116 aaaatgttacatgaacatccttt-attcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||| |||||||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 55966445 - 55966347
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  55966445 gaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacaatttatctt 55966347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 27893940 - 27893843
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 27893843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 23035981 - 23036079
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| ||||||||||||||| |  ||||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  23035981 gaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatctt 23036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 25051694 - 25051792
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||| |||||||||  ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  25051694 gaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatctt 25051792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 27316812 - 27316714
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||| | ||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||    
T  27316812 gaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatctt 27316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 39631102 - 39631200
Alignment:
Q  116 aaaatgttacatgaacatccttt-attcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||| |||||||||  ||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 39631200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 43735744 - 43735841
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||| ||||||||||| |||| |||||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcacaatcacactttatctt 43735841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 23204875 - 23204779
Alignment:
Q  117 aaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatctt 23204779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 48463549 - 48463454
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    ||||||||||||| |||| | ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  48463549 gaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttat 48463454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 12496957 - 12497055
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||| ||||||| ||||||||||||||   ||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  12496957 gaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 12497055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 28982921 - 28982823
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| ||||| |  |||||||| ||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  28982921 gaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaaccgcactttatctt 28982823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 43514784 - 43514687
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| ||||||||||||||   ||||||||||  |||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaaccacaccttatctt 43514687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 31680904 - 31681001
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||| | |||| | ||||||| |||||  ||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatctt 31681001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 28988474 - 28988572
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||||| | |||||| |||||| ||| ||||||| | ||||||||||| ||||    
T  28988474 gaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 41878407 - 41878494
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaacca 202  Q
    ||||||||||||||||||  |||||||| |||| |||||||||||||| ||  ||||||||||||||| ||||||||||| |||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaacca 41878494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 55272475 - 55272377
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctc-attgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||||||||| || |||| ||| ||||||||||||||| |||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  55272475 gaaaatgttacatgaacatcctttaatcataca-ctctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 55272377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 45490412 - 45490314
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||   ||||||  ||||||  |||||||||| ||||||||||||||| ||| |||| ||||||| ||||||||||||||||||    
T  45490412 gaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatctt 45490314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 17619251 - 17619153
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| | |||| || |||| |  ||||||||||||||| |||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  17619251 gaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 17619153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 41847972 - 41848070
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||| ||||||||||| |||  ||| |||||||||||||||||| ||||| || ||||||| || ||||||  ||||||||||||| ||||    
T  41847972 gaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 51512323 - 51512266
Alignment:
Q  156 tacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  51512323 tacaccccatgtattagagatattttggtaagttcatcttataaccacactttatctt 51512266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 711961 - 712059
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||| ||| |||| |||||||||||||| ||||||| |||| || ||||| ||||    
T  711961 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctt 712059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 21687007 - 21687105
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||||||||||||  |||| | |||| |||| |  |||||||||  ||||||| |||||||||||| | ||||| ||||||||||    
T  21687007 gaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctcataaccatactttatctt 21687105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 32728358 - 32728456
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||||||||| || |||| |  ||||||||||||||| |||| ||| ||||| |||| ||||||| |||| || ||||| ||||    
T  32728358 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctctt 32728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 38851515 - 38851612
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||| |||||||| || ||||||  | ||||||| ||||| |||| ||| |||||| ||| ||||||| ||||||| ||||| ||||    
T  38851515 aaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 38851612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 3756344 - 3756252
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacacttt 208  Q
    ||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||| ||||||||| |||| || |||| |||| || |||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt 3756252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 35037007 - 35037093
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctc-attgtacaccccatgtattagggatattttggtaagttcatctgacaacca 202  Q
    |||||||||||||| || ||||||  | |||| ||| ||||||||||||||| |||| |||||||||||||| ||||||| |||||||    
T  35037007 aaaatgttacatgagcaccctttaaccataca-ctctattgtacaccccatgcattaaggatattttggtaaattcatctcacaacca 35037093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 46412516 - 46412470
Alignment:
Q  167 tattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  46412516 tattagagatattttggtaagttcttctcacaaccacactttatctt 46412470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 48435678 - 48435580
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||| ||||||||||||| | |||| ||  ||| |  ||||||||||||||| |||||||| || ||||||| ||||||| |||| || ||||||||||    
T  48435678 gaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 48435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 960969 - 960890
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctc-attgtacaccccatgtattagggatattttggtaagttcatct 194  Q
    |||||||||||||||||| |||||| || |||| ||| ||||||||||| ||  |||||||| |||||||||| |||||||    
T  960969 gaaaatgttacatgaacaccctttaatcataca-ctctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 49229763 - 49229684
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatct 194  Q
    |||||||||| |||||||||||||| || |||| |  |||||||||  |||| |||| ||||||| |||||| |||||||    
T  49229763 gaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 19879992 - 19880053
Alignment:
Q  152 attgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||| ||||| ||| |||||||||| ||||||| |||| || ||||| ||||    
T  19879992 attgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctt 19880053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 41327641 - 41327544
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||  ||| |||||||||  ||| | |||||||||||  ||| | || ||| |||||||||| ||||||| ||| ||||||||| ||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctctt 41327544  T

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Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 30838633 - 30838731
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30838633 gaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 30838731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 19047157 - 19047256
Alignment:
Q  114 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19047157 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 19047256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 1750415 - 1750513
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  1750415 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 1750513  T

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Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 43335862 - 43335764
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  43335862 gaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatctt 43335764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 43490499 - 43490402
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatctt 43490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 12302352 - 12302254
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12302352 gaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 12302254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 16096748 - 16096846
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  16096748 gaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatctt 16096846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 116 - 208
Target Start/End: Original strand, 33229303 - 33229396
Alignment:
Q  116 aaaatgttacatgaacatccttt-attcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacacttt 208  Q
    |||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatcatacaatcacacttt 33229396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 4764825 - 4764727
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| | |||||||||||| |  ||||||||||||||||||||   |||||||||||| ||||||| ||||||||||||||||||    
T  4764825 gaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatctt 4764727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 34817877 - 34817777
Alignment:
Q  113 gagaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatct 212  Q
    |||||||||||||||||||| |||||||||  ||| |||||||||||||||||| | || | | |||||||||| ||||||| ||||||||||||| |||    
T  34817877 gagaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctct 34817778  T
Q  213 t 213  Q
    |    
T  34817777 t 34817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 12415559 - 12415461
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| || ||||||||||||||| |||||||| |||||||||| || |||| ||||||| ||||| ||||    
T  12415559 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctt 12415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 12427619 - 12427521
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| || ||||||||||||||| |||||||| |||||||||| || |||| ||||||| ||||| ||||    
T  12427619 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctt 12427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 43114558 - 43114656
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||||||| |||||||||| ||||||| ||||||| ||||| ||||    
T  43114558 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 43114656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 13780834 - 13780736
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| ||||   |||||||  ||| |||||||||||||||||  ||||||||||||||| ||| ||||||| ||||||||||||| ||||    
T  13780834 gaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctctt 13780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 42849916 - 42849862
Alignment:
Q  156 tacaccccatgtattagggatattttggtaagttcatctgacaaccacactttat 210  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  42849916 tacaccccatgtattagggatattttgataagttcatctcacaaccacactttat 42849862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 11825752 - 11825655
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||||||| |||||||||| ||||||| |||| || ||||| ||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctctt 11825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 41282072 - 41281975
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||||||| |||||| ||| ||||||| ||||||| ||||| ||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctctt 41281975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 16803969 - 16804067
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  |||||||| |||||| |||||||| |||||| ||| ||||||| ||||||| ||||| ||||    
T  16803969 gaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctt 16804067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 16843251 - 16843349
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  |||||||| |||||| |||||||| |||||| ||| ||||||| ||||||| ||||| ||||    
T  16843251 gaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctt 16843349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 8896681 - 8896589
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacacttt 208  Q
    ||||||||||||||||| |||||||||  ||||  |||||||||||| ||  | |||| |||||||||||| ||||||| |||| ||||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaatcacacttt 8896589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 4452034 - 4451951
Alignment:
Q  130 acatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||| || || ||||||| ||||||||||  ||| ||||||||||||||||||| ||||||| ||||||| ||||| ||||    
T  4452034 acatcctataatcatacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctt 4451951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 7070418 - 7070505
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccac 203  Q
    ||||||||||||||||| ||||||||| |||||| |||||||  | |||| |||| |||| |||||| ||| ||||||| ||||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatcttacaaccac 7070505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 39149354 - 39149293
Alignment:
Q  152 attgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||| || ||||||||| ||||||||||||||||||||  ||||| ||||||||||||    
T  39149354 attgtacatcctatgtattagagatattttggtaagttcatcccacaactacactttatctt 39149293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 6518566 - 6518484
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctc-attgtacaccccatgtattagggatattttggtaagttcatctgacaa 199  Q
    ||||||||||||||||| |||||| || |||| ||| ||||||||||||||| |||||||| |||||||||| ||||||| ||||    
T  6518566 aaaatgttacatgaaca-cctttaatcataca-ctctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 18491706 - 18491798
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactt 207  Q
    |||||||||||||||||| |||||| || |||| |  |||||||||| |||| |||| | | |||||||||| ||||||| ||||||| ||||    
T  18491706 gaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatactt 18491798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 42026768 - 42026863
Alignment:
Q  115 gaaaatgttacatgaacatcc--tttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacacttt 208  Q
    |||||||||||||||||| ||  ||||||| |||||  ||||||||| |||  | |||||||||||||||| || ||||||| ||||| |||||||    
T  42026768 gaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaactacacttt 42026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 966933 - 966835
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||| | |  ||||||||| ||||||| |||| || ||||| ||||    
T  966933 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctt 966835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 34895840 - 34895742
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||| ||||||||||||| | |||| ||  ||| |  ||||||||||||||| |||||||| || ||||||| ||||||| |||| || ||||||||||    
T  34895840 gaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 34895742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 42849945 - 42849913
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctaca 147  Q
    |||||||||||||||||| ||||||||||||||    
T  42849945 gaaaatgttacatgaacaccctttattcctaca 42849913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 112655 - 112754
Alignment:
Q  114 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  112655 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 112754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 11252 - 11350
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||| |||||||||  |||||||| |||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  11252 gaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatctt 11350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 14287 - 14189
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| ||||| | ||||||||| || |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  14287 gaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 14189  T

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Target: scaffold0187; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 24615 - 24517
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||||||||||| |||||||| ||||| | ||||||||| || |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  24615 gaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 24517  T

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Target: scaffold0157 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 23520 - 23422
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    |||||||||| ||||||| ||||||||||||||   ||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  23520 gaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 23422  T

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Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 45817 - 45720
Alignment:
Q  116 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||||||| |||||| || |||| |  |||||||| || |||||||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 45720  T

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Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 35555 - 35457
Alignment:
Q  115 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctgacaaccacactttatctt 213  Q
    ||||||||||||| |||| | |||| || |||| |  ||||||||||||||| |||||||| || ||||||| ||||||| ||||||| ||||| ||||    
T  35555 gaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctctt 35457  T

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