View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1603_low_12 (Length: 227)

Name: NF1603_low_12
Description: NF1603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1603_low_12
NF1603_low_12
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-214)||(99039-99252)
scaffold0035 (5-200)||(19318-19513)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-214)||(3370-3584)
[»] chr8 (45 HSPs)
chr8 (1-214)||(36105253-36105467)
chr8 (1-214)||(22663174-22663388)
chr8 (1-200)||(22673836-22674036)
chr8 (1-212)||(15335969-15336181)
chr8 (1-212)||(15425034-15425246)
chr8 (1-212)||(15516338-15516550)
chr8 (1-200)||(40845281-40845480)
chr8 (1-214)||(24551332-24551546)
chr8 (1-200)||(9320627-9320828)
chr8 (1-184)||(23185135-23185319)
chr8 (1-214)||(1237695-1237909)
chr8 (32-184)||(6407806-6407958)
chr8 (1-200)||(17797480-17797680)
chr8 (75-184)||(3598255-3598364)
chr8 (32-184)||(14989369-14989522)
chr8 (1-184)||(45538348-45538532)
chr8 (5-184)||(19156258-19156440)
chr8 (32-200)||(43639863-43640032)
chr8 (1-164)||(16207364-16207530)
chr8 (5-200)||(39693597-39693794)
chr8 (37-184)||(21301107-21301255)
chr8 (32-184)||(18151574-18151717)
chr8 (5-184)||(12757670-12757852)
chr8 (5-167)||(30421354-30421517)
chr8 (1-184)||(24832965-24833149)
chr8 (1-167)||(18121033-18121202)
chr8 (5-184)||(602627-602809)
chr8 (5-192)||(17914521-17914710)
chr8 (1-200)||(21932941-21933143)
chr8 (5-156)||(33082919-33083073)
chr8 (5-167)||(17441732-17441896)
chr8 (11-192)||(19943304-19943488)
chr8 (37-184)||(13430545-13430694)
chr8 (4-156)||(16189045-16189200)
chr8 (80-200)||(20382288-20382407)
chr8 (37-184)||(21288488-21288636)
chr8 (5-200)||(24646400-24646597)
chr8 (5-200)||(29693377-29693574)
chr8 (77-192)||(22745622-22745738)
chr8 (5-120)||(20255538-20255654)
chr8 (126-200)||(43774052-43774127)
chr8 (75-214)||(45567778-45567919)
chr8 (77-167)||(18321083-18321175)
chr8 (130-184)||(1745339-1745393)
chr8 (154-214)||(23263506-23263565)
[»] chr5 (39 HSPs)
chr5 (1-214)||(26759211-26759425)
chr5 (1-200)||(29138283-29138481)
chr5 (1-184)||(15517031-15517215)
chr5 (1-214)||(30743042-30743256)
chr5 (1-214)||(11993950-11994164)
chr5 (1-184)||(3245333-3245516)
chr5 (29-184)||(42243771-42243927)
chr5 (1-184)||(4887084-4887268)
chr5 (5-184)||(41566323-41566505)
chr5 (32-184)||(28464240-28464392)
chr5 (1-184)||(33022726-33022910)
chr5 (1-214)||(33933330-33933547)
chr5 (1-115)||(26765560-26765674)
chr5 (37-200)||(35986116-35986279)
chr5 (32-167)||(9089053-9089188)
chr5 (75-200)||(32160903-32161029)
chr5 (1-184)||(14086428-14086613)
chr5 (32-153)||(25930087-25930209)
chr5 (1-148)||(31117939-31118088)
chr5 (17-184)||(6512322-6512490)
chr5 (80-184)||(26784496-26784602)
chr5 (98-184)||(5430044-5430130)
chr5 (32-184)||(10848857-10849010)
chr5 (3-87)||(28139671-28139755)
chr5 (5-156)||(89339-89493)
chr5 (98-184)||(30115767-30115853)
chr5 (37-184)||(35931905-35932054)
chr5 (106-184)||(23412865-23412943)
chr5 (38-200)||(21660302-21660466)
chr5 (5-156)||(21910622-21910776)
chr5 (1-214)||(7745555-7745768)
chr5 (129-174)||(9398644-9398689)
chr5 (139-200)||(28139773-28139834)
chr5 (1-58)||(30115855-30115912)
chr5 (5-200)||(17815034-17815229)
chr5 (127-167)||(21072147-21072187)
chr5 (133-200)||(12352692-12352758)
chr5 (82-184)||(23391505-23391604)
chr5 (129-197)||(23478545-23478614)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-183)||(9221-9403)
[»] chr6 (43 HSPs)
chr6 (1-200)||(21618310-21618510)
chr6 (1-214)||(16336193-16336403)
chr6 (1-214)||(19832901-19833115)
chr6 (1-200)||(22076290-22076490)
chr6 (1-184)||(15954769-15954953)
chr6 (1-153)||(12349059-12349211)
chr6 (1-184)||(16877279-16877463)
chr6 (1-182)||(20487818-20488001)
chr6 (1-109)||(12423327-12423435)
chr6 (2-184)||(33351828-33352009)
chr6 (37-184)||(19065926-19066074)
chr6 (1-184)||(32544331-32544517)
chr6 (1-184)||(20730603-20730787)
chr6 (1-184)||(22802207-22802391)
chr6 (1-200)||(26972109-26972311)
chr6 (1-167)||(9717909-9718078)
chr6 (1-179)||(18435622-18435803)
chr6 (14-192)||(25597558-25597738)
chr6 (5-184)||(12715318-12715499)
chr6 (96-184)||(139267-139355)
chr6 (96-184)||(147288-147376)
chr6 (77-184)||(21235256-21235363)
chr6 (5-200)||(13602242-13602439)
chr6 (1-167)||(21625167-21625333)
chr6 (5-120)||(15302270-15302386)
chr6 (1-197)||(15531509-15531707)
chr6 (1-184)||(16265049-16265233)
chr6 (143-211)||(19482933-19483001)
chr6 (1-184)||(29918083-29918266)
chr6 (29-200)||(13435626-13435799)
chr6 (77-184)||(17608222-17608331)
chr6 (127-184)||(19086343-19086399)
chr6 (77-200)||(22386928-22387053)
chr6 (11-200)||(23284640-23284831)
chr6 (1-148)||(19688832-19688980)
chr6 (5-184)||(20112596-20112779)
chr6 (130-214)||(26589789-26589873)
chr6 (5-148)||(14100373-14100519)
chr6 (80-156)||(19624125-19624203)
chr6 (130-200)||(17381610-17381680)
chr6 (147-184)||(12423434-12423471)
chr6 (88-184)||(34451568-34451663)
chr6 (80-156)||(24116974-24117053)
[»] chr3 (58 HSPs)
chr3 (1-214)||(14955492-14955706)
chr3 (1-214)||(2785130-2785344)
chr3 (1-214)||(24775412-24775628)
chr3 (1-199)||(21640932-21641130)
chr3 (1-148)||(5213641-5213789)
chr3 (11-167)||(20627358-20627515)
chr3 (29-200)||(49666309-49666480)
chr3 (1-185)||(53056636-53056821)
chr3 (1-214)||(33583295-33583510)
chr3 (3-200)||(46349738-46349936)
chr3 (37-200)||(21636573-21636737)
chr3 (32-184)||(46796287-46796439)
chr3 (1-200)||(28582171-28582373)
chr3 (1-184)||(11223628-11223812)
chr3 (1-184)||(11869133-11869317)
chr3 (1-184)||(14969392-14969578)
chr3 (32-184)||(30054136-30054288)
chr3 (1-167)||(47207771-47207939)
chr3 (37-200)||(21605557-21605721)
chr3 (1-184)||(2561253-2561439)
chr3 (5-164)||(49642690-49642852)
chr3 (1-199)||(18121515-18121716)
chr3 (1-200)||(29855474-29855675)
chr3 (37-184)||(40851060-40851208)
chr3 (98-214)||(33598014-33598130)
chr3 (1-167)||(47405348-47405515)
chr3 (5-200)||(20646223-20646421)
chr3 (5-200)||(13948405-13948602)
chr3 (1-167)||(40799939-40800106)
chr3 (1-138)||(22140829-22140967)
chr3 (107-184)||(12962995-12963072)
chr3 (11-200)||(15903274-15903465)
chr3 (5-156)||(37467402-37467556)
chr3 (5-115)||(41495068-41495179)
chr3 (106-200)||(50300373-50300467)
chr3 (77-200)||(52920547-52920671)
chr3 (127-167)||(16658543-16658583)
chr3 (5-156)||(12726166-12726320)
chr3 (75-181)||(12752539-12752646)
chr3 (5-192)||(29951339-29951528)
chr3 (5-192)||(30000493-30000682)
chr3 (82-200)||(1727919-1728037)
chr3 (67-214)||(37412726-37412871)
chr3 (75-214)||(51341143-51341283)
chr3 (5-167)||(38177568-38177733)
chr3 (3-156)||(49553425-49553581)
chr3 (1-120)||(13824134-13824254)
chr3 (82-181)||(45858660-45858760)
chr3 (133-180)||(512493-512540)
chr3 (5-200)||(6090801-6090998)
chr3 (5-52)||(16658661-16658708)
chr3 (138-200)||(41495179-41495240)
chr3 (75-139)||(11908977-11909042)
chr3 (11-52)||(13780627-13780668)
chr3 (5-50)||(16032594-16032639)
chr3 (80-184)||(19888854-19888959)
chr3 (174-214)||(1727920-1727960)
chr3 (143-199)||(31303596-31303651)
[»] chr2 (49 HSPs)
chr2 (1-200)||(33074286-33074486)
chr2 (1-214)||(34321762-34321976)
chr2 (1-200)||(35743842-35744040)
chr2 (1-214)||(31327791-31328006)
chr2 (1-214)||(31334512-31334727)
chr2 (1-184)||(6392694-6392879)
chr2 (6-214)||(45087008-45087219)
chr2 (1-184)||(28711553-28711738)
chr2 (32-199)||(22785506-22785673)
chr2 (1-184)||(6573978-6574163)
chr2 (1-185)||(28701083-28701269)
chr2 (32-184)||(28550784-28550936)
chr2 (5-200)||(23235071-23235268)
chr2 (1-214)||(30557145-30557360)
chr2 (1-214)||(22802520-22802717)
chr2 (32-184)||(1586898-1587051)
chr2 (1-184)||(20151890-20152075)
chr2 (37-184)||(31967909-31968056)
chr2 (5-200)||(22187941-22188138)
chr2 (32-184)||(3277112-3277265)
chr2 (32-184)||(40332169-40332322)
chr2 (32-184)||(44840516-44840665)
chr2 (32-148)||(22776190-22776306)
chr2 (32-148)||(22781568-22781684)
chr2 (87-200)||(25037098-25037212)
chr2 (87-200)||(25041205-25041319)
chr2 (1-184)||(31800743-31800927)
chr2 (11-200)||(30667059-30667250)
chr2 (5-184)||(13963832-13964014)
chr2 (5-184)||(18376760-18376942)
chr2 (1-200)||(22317653-22317856)
chr2 (1-200)||(38781459-38781658)
chr2 (5-156)||(20568632-20568786)
chr2 (5-156)||(25829198-25829352)
chr2 (75-167)||(1084142-1084235)
chr2 (5-157)||(22260470-22260625)
chr2 (104-184)||(24377265-24377347)
chr2 (17-214)||(24576111-24576309)
chr2 (14-167)||(30621289-30621445)
chr2 (14-167)||(30623910-30624066)
chr2 (5-200)||(9015210-9015406)
chr2 (141-184)||(39037496-39037539)
chr2 (32-106)||(14581597-14581671)
chr2 (80-200)||(10009590-10009709)
chr2 (174-214)||(44840625-44840665)
chr2 (37-200)||(23392517-23392681)
chr2 (143-184)||(23184184-23184225)
chr2 (143-184)||(23595441-23595482)
chr2 (80-192)||(7609102-7609213)
[»] scaffold0217 (3 HSPs)
scaffold0217 (2-214)||(21962-22175)
scaffold0217 (1-184)||(9626-9809)
scaffold0217 (1-184)||(19097-19283)
[»] chr1 (49 HSPs)
chr1 (1-200)||(48570047-48570246)
chr1 (1-184)||(44821376-44821560)
chr1 (1-214)||(25448365-25448581)
chr1 (1-214)||(2327240-2327454)
chr1 (1-199)||(21702879-21703077)
chr1 (32-200)||(10251073-10251241)
chr1 (32-200)||(46089076-46089245)
chr1 (5-153)||(30572266-30572414)
chr1 (1-184)||(35040231-35040415)
chr1 (1-184)||(2834755-2834938)
chr1 (5-180)||(22427192-22427368)
chr1 (5-184)||(28492233-28492415)
chr1 (1-167)||(29215862-29216029)
chr1 (1-167)||(22600028-22600197)
chr1 (1-200)||(22464623-22464824)
chr1 (5-184)||(32785767-32785948)
chr1 (1-199)||(35401874-35402072)
chr1 (1-167)||(1900410-1900579)
chr1 (1-184)||(39200823-39201007)
chr1 (1-184)||(16235127-16235311)
chr1 (5-167)||(20954319-20954484)
chr1 (87-200)||(34255343-34255453)
chr1 (5-197)||(33256170-33256362)
chr1 (5-197)||(33276342-33276534)
chr1 (57-184)||(42284739-42284867)
chr1 (75-214)||(7744891-7745030)
chr1 (1-199)||(23036344-23036542)
chr1 (1-138)||(2267154-2267292)
chr1 (40-184)||(21120903-21121049)
chr1 (37-200)||(21204745-21204911)
chr1 (81-184)||(26701958-26702063)
chr1 (1-167)||(38282631-38282800)
chr1 (80-214)||(12284568-12284704)
chr1 (130-199)||(17371221-17371290)
chr1 (5-157)||(22153926-22154081)
chr1 (113-184)||(21134999-21135070)
chr1 (88-167)||(7309971-7310052)
chr1 (152-214)||(34255344-34255406)
chr1 (5-214)||(48704273-48704482)
chr1 (143-200)||(19215792-19215849)
chr1 (143-184)||(21029003-21029044)
chr1 (6-70)||(22201682-22201746)
chr1 (98-173)||(37642402-37642477)
chr1 (129-200)||(19170163-19170236)
chr1 (98-184)||(21984750-21984836)
chr1 (5-184)||(10757490-10757671)
chr1 (143-200)||(12284648-12284705)
chr1 (143-200)||(17024795-17024852)
chr1 (1-70)||(36134255-36134323)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-214)||(6571-6785)
[»] chr4 (43 HSPs)
chr4 (1-184)||(6517545-6517729)
chr4 (1-184)||(10692911-10693095)
chr4 (1-184)||(10906677-10906861)
chr4 (32-184)||(17398551-17398703)
chr4 (1-167)||(54679990-54680155)
chr4 (1-180)||(3483781-3483963)
chr4 (1-200)||(17247304-17247503)
chr4 (5-214)||(29121434-29121633)
chr4 (1-184)||(413062-413246)
chr4 (1-148)||(3105323-3105470)
chr4 (1-214)||(37435373-37435586)
chr4 (1-198)||(55731840-55732036)
chr4 (1-214)||(8105698-8105913)
chr4 (1-184)||(19884762-19884947)
chr4 (2-108)||(16940077-16940183)
chr4 (12-214)||(3395661-3395868)
chr4 (77-184)||(14571161-14571268)
chr4 (5-167)||(14833460-14833625)
chr4 (1-167)||(13575998-13576165)
chr4 (77-184)||(16853620-16853727)
chr4 (5-159)||(14904246-14904403)
chr4 (1-109)||(25651046-25651155)
chr4 (5-120)||(9140976-9141092)
chr4 (1-167)||(22675404-22675571)
chr4 (87-200)||(3499514-3499624)
chr4 (1-182)||(56034634-56034816)
chr4 (37-184)||(15475018-15475167)
chr4 (37-184)||(22190933-22191082)
chr4 (104-184)||(3793287-3793367)
chr4 (6-200)||(12811028-12811224)
chr4 (5-167)||(19911762-19911927)
chr4 (5-167)||(29680426-29680591)
chr4 (5-167)||(45833458-45833623)
chr4 (143-214)||(3499515-3499586)
chr4 (82-200)||(17700662-17700777)
chr4 (143-214)||(17700663-17700734)
chr4 (98-184)||(39419611-39419697)
chr4 (48-200)||(40860765-40860918)
chr4 (5-120)||(12601165-12601281)
chr4 (143-179)||(14153874-14153910)
chr4 (106-167)||(23123597-23123660)
chr4 (130-181)||(14904190-14904241)
chr4 (5-70)||(37985594-37985659)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-200)||(7001-7201)
[»] chr7 (53 HSPs)
chr7 (1-150)||(15704445-15704595)
chr7 (1-167)||(2265448-2265615)
chr7 (1-198)||(35952585-35952784)
chr7 (1-200)||(4821536-4821735)
chr7 (1-184)||(16542932-16543116)
chr7 (1-184)||(16622546-16622730)
chr7 (1-200)||(12174236-12174436)
chr7 (1-148)||(14426609-14426757)
chr7 (1-200)||(8182992-8183191)
chr7 (1-184)||(48236814-48236998)
chr7 (32-198)||(48062727-48062894)
chr7 (1-148)||(30944271-30944419)
chr7 (1-214)||(21283256-21283469)
chr7 (1-184)||(16111796-16111980)
chr7 (1-184)||(28622268-28622452)
chr7 (1-148)||(30945304-30945452)
chr7 (5-183)||(44467130-44467312)
chr7 (2-200)||(9069625-9069826)
chr7 (37-184)||(27871808-27871956)
chr7 (5-184)||(2913518-2913700)
chr7 (5-184)||(15088586-15088768)
chr7 (1-178)||(23279875-23280054)
chr7 (1-184)||(33605747-33605932)
chr7 (1-167)||(9709731-9709898)
chr7 (37-184)||(14425536-14425683)
chr7 (13-167)||(10883100-10883257)
chr7 (37-181)||(19339174-19339319)
chr7 (1-182)||(33691624-33691808)
chr7 (76-218)||(4428964-4429107)
chr7 (5-184)||(21695467-21695649)
chr7 (5-199)||(13880170-13880366)
chr7 (37-153)||(32264669-32264786)
chr7 (1-200)||(19710907-19711109)
chr7 (9-184)||(2500108-2500286)
chr7 (5-159)||(13302876-13303033)
chr7 (101-184)||(30026068-30026153)
chr7 (37-184)||(21381349-21381497)
chr7 (77-149)||(7339821-7339893)
chr7 (13-200)||(11319479-11319668)
chr7 (1-167)||(15467978-15468147)
chr7 (129-184)||(39284475-39284530)
chr7 (8-184)||(331713-331894)
chr7 (32-106)||(1293114-1293188)
chr7 (53-197)||(4411870-4412015)
chr7 (5-200)||(16316454-16316649)
chr7 (37-138)||(24794681-24794783)
chr7 (1-118)||(19237022-19237139)
chr7 (130-214)||(48805769-48805854)
chr7 (1-52)||(14193176-14193227)
chr7 (14-152)||(12366690-12366831)
chr7 (77-167)||(11793046-11793138)
chr7 (106-200)||(14193242-14193337)
chr7 (154-218)||(12366642-12366705)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-184)||(60869-61053)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-200)||(215342-215542)
[»] scaffold0011 (4 HSPs)
scaffold0011 (1-184)||(65290-65473)
scaffold0011 (1-184)||(144335-144518)
scaffold0011 (75-214)||(164776-164916)
scaffold0011 (1-53)||(164939-164991)
[»] scaffold0043 (1 HSPs)
scaffold0043 (5-184)||(78227-78407)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-181)||(211464-211643)
scaffold0004 (5-200)||(377403-377600)
scaffold0004 (127-200)||(220432-220504)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-198)||(5446-5647)
[»] scaffold0473 (1 HSPs)
scaffold0473 (37-184)||(2573-2720)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-180)||(22742-22924)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-148)||(552-700)
scaffold1359 (37-184)||(1626-1773)
[»] scaffold0527 (2 HSPs)
scaffold0527 (1-153)||(7998-8150)
scaffold0527 (77-153)||(11-87)
[»] scaffold0249 (1 HSPs)
scaffold0249 (32-184)||(17636-17788)
[»] scaffold0247 (2 HSPs)
scaffold0247 (57-184)||(23424-23551)
scaffold0247 (1-61)||(25384-25444)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-177)||(7769-7948)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-184)||(89916-90100)
[»] scaffold0005 (2 HSPs)
scaffold0005 (77-184)||(246108-246215)
scaffold0005 (5-167)||(6074-6239)
[»] scaffold1331 (2 HSPs)
scaffold1331 (1-138)||(1606-1744)
scaffold1331 (143-184)||(472-513)
[»] scaffold0084 (4 HSPs)
scaffold0084 (5-167)||(49402-49567)
scaffold0084 (75-200)||(189-315)
scaffold0084 (5-184)||(32555-32737)
scaffold0084 (1-53)||(338-390)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-184)||(143154-143340)
[»] scaffold0056 (2 HSPs)
scaffold0056 (37-184)||(34674-34822)
scaffold0056 (47-200)||(25519-25673)
[»] scaffold0047 (1 HSPs)
scaffold0047 (5-167)||(30294-30459)
[»] scaffold0479 (1 HSPs)
scaffold0479 (5-184)||(10039-10219)
[»] scaffold0861 (1 HSPs)
scaffold0861 (5-200)||(4791-4988)
[»] scaffold0297 (1 HSPs)
scaffold0297 (75-182)||(17089-17197)
[»] scaffold0022 (2 HSPs)
scaffold0022 (78-183)||(39569-39676)
scaffold0022 (78-183)||(137629-137736)
[»] scaffold0290 (1 HSPs)
scaffold0290 (5-200)||(18465-18662)
[»] scaffold0083 (1 HSPs)
scaffold0083 (5-167)||(25851-26016)
[»] scaffold0771 (1 HSPs)
scaffold0771 (5-200)||(545-742)
[»] scaffold0352 (1 HSPs)
scaffold0352 (37-184)||(691-839)
[»] scaffold0411 (1 HSPs)
scaffold0411 (5-200)||(12279-12476)
[»] scaffold0210 (1 HSPs)
scaffold0210 (5-156)||(1730-1884)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-164)||(20850-21016)
[»] scaffold0026 (2 HSPs)
scaffold0026 (5-156)||(60086-60240)
scaffold0026 (5-156)||(7996-8150)
[»] scaffold0161 (1 HSPs)
scaffold0161 (11-167)||(9983-10143)
[»] scaffold0337 (1 HSPs)
scaffold0337 (11-214)||(14724-14927)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-184)||(27290-27474)
[»] scaffold0120 (2 HSPs)
scaffold0120 (5-200)||(36619-36816)
scaffold0120 (5-200)||(42189-42386)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-70)||(2707-2775)
[»] scaffold0045 (2 HSPs)
scaffold0045 (37-200)||(87456-87618)
scaffold0045 (161-214)||(87457-87510)
[»] scaffold0570 (1 HSPs)
scaffold0570 (75-200)||(1521-1649)
[»] scaffold0485 (1 HSPs)
scaffold0485 (127-214)||(9238-9322)
[»] scaffold0261 (1 HSPs)
scaffold0261 (104-181)||(5801-5880)
[»] scaffold0359 (1 HSPs)
scaffold0359 (5-156)||(5577-5731)
[»] scaffold0243 (1 HSPs)
scaffold0243 (77-200)||(4837-4961)
[»] scaffold1434 (1 HSPs)
scaffold1434 (5-192)||(640-827)
[»] scaffold0151 (1 HSPs)
scaffold0151 (130-214)||(11557-11641)
[»] scaffold0132 (1 HSPs)
scaffold0132 (75-182)||(37947-38055)
[»] scaffold0065 (1 HSPs)
scaffold0065 (11-214)||(1766-1969)
[»] scaffold0069 (1 HSPs)
scaffold0069 (37-167)||(5211-5342)
[»] scaffold0016 (1 HSPs)
scaffold0016 (82-184)||(864-963)
[»] scaffold0211 (2 HSPs)
scaffold0211 (158-200)||(15462-15504)
scaffold0211 (144-214)||(15463-15533)
[»] scaffold0426 (1 HSPs)
scaffold0426 (5-70)||(13641-13706)
[»] scaffold0364 (1 HSPs)
scaffold0364 (129-184)||(6203-6256)


Alignment Details
Target: scaffold0035 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 99252 - 99039
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||||||||    
T  99252 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccggtcatctgcaactttagacgagtttgaatccgttaaa 99153  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  99152 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaacttacttttgatgac 99053  T
Q  201 cttgcttctgatga 214  Q
    ||||||||||||||    
T  99052 cttgcttctgatga 99039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 19513 - 19318
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| ||||||||| ||||||  ||| ||| | |||||| ||| | |||| |||  || ||||| || ||||     
T  19513 aagaacaagcatccaatgcttttaaatcctttcaaaatagttgttgcttcactcttctagtcttctgcaattcttaggcgaaattaaatccattgaacaa 19414  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||||||||||||  ||||  |||| |||||||||||||||||||||||||  |||||| ||  |  ||||||||||||| |||||| |||||||    
T  19413 cttttgaagctttaagtcttgcatctcctcatgaactacaacttctggtgatctt--gcttcttat-gagatgcttctgatgaacttgcttctgatgac 19318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 3370 - 3584
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  3370 tttgaagaataaacatccaatgccttcaaatccttccaaaatagccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatccgttaa 3469  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||||||||||||||||||  ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||    
T  3470 acagcttttgaagctttaagttgcatctcctgatgaactatagcttctggtgattttcagcttctgataaacttgcttctgatgaacttgcttctgatga 3569  T
Q  200 ccttgcttctgatga 214  Q
    |||||||||||||||    
T  3570 ccttgcttctgatga 3584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 36105253 - 36105467
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  36105253 tttgaagaataaacatccaatgccttcaaatccttccaaaatagccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatccgttaa 36105352  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||||||||||||||||||  ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||    
T  36105353 acagcttttgaagctttaagttgcatctcctgatgaactatagcttctggtgattttcagcttctgataaacttgcttctgatgaacttgcttctgatga 36105452  T
Q  200 ccttgcttctgatga 214  Q
    |||||||||||||||    
T  36105453 ccttgcttctgatga 36105467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 22663174 - 22663388
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||| ||||||||| ||||||| |||||| ||| ||| |||||||||||||||||||||    
T  22663174 tttgaagaataagcatccaatgtcttctaatctttccaaaatagttgttgctatatttttccagtcttctgcaatcttcagacgagtttgaatccgttaa 22663273  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| | |||| |    
T  22663274 acagcttttgaagctttaagttgcatctcctaatgaactacaacttctagtgatcttcagcttctaataaacttgcttctgatgaacttgcatctgatta 22663373  T
Q  200 ccttgcttctgatga 214  Q
    |||||||||||||||    
T  22663374 ccttgcttctgatga 22663388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22673836 - 22674036
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||| | |||||| ||| ||  |||||||||||||||||||||    
T  22673836 tttgaagaataagcatccaatgtcttctaatccttccaaaatagatgttgctatacttttctagtcttctgcaatctccagacgagtttgaatccgttaa 22673935  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  22673936 acaacttttgaagctttaagttgcatctccggatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaacttgcttctgatga 22674035  T
Q  200 c 200  Q
    |    
T  22674036 c 22674036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 15336181 - 15335969
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||||||||||||||||||||  ||||||| ||||||||||||||||  |||||  || |||||| ||| |||||||||||||||| ||| ||||    
T  15336181 tttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaa 15336082  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||    
T  15336081 acaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatga 15335982  T
Q  200 ccttgcttctgat 212  Q
    |||||||||||||    
T  15335981 ccttgcttctgat 15335969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 15425246 - 15425034
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||||||||||||||||||||  ||||||| ||||||||||||||||  |||||  || |||||| ||| |||||||||||||||| ||| ||||    
T  15425246 tttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaa 15425147  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||    
T  15425146 acaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatga 15425047  T
Q  200 ccttgcttctgat 212  Q
    |||||||||||||    
T  15425046 ccttgcttctgat 15425034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 15516550 - 15516338
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||||||||||||||||||||  ||||||| ||||||||||||||||  |||||  || |||||| ||| |||||||||||||||| ||| ||||    
T  15516550 tttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaa 15516451  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||    
T  15516450 acaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatga 15516351  T
Q  200 ccttgcttctgat 212  Q
    |||||||||||||    
T  15516350 ccttgcttctgat 15516338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 40845480 - 40845281
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||||    
T  40845480 tttgaagaataagcatccaatgccttccaatccttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcc-ttaa 40845382  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtga-tcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||| |||||||||||||||| ||||  ||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||  |||||| |||||    
T  40845381 acaacttttgaagctttaagctgcatctcctgatgaactatagcttctggtgagtctt-agcttctgataaacttgcttctgatgaccttgcttctgatg 40845283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 24551332 - 24551546
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  |||| || ||||||||||||||||  ||||||||| |||||| ||| ||||||||||| |||||||| ||||    
T  24551332 tttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaa 24551431  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||| ||||||||||   | ||||||||| || ||||||||||| ||  ||||||||||||||||||||| ||||| | |||| ||||||    
T  24551432 acaacttttgaagccttaagttgcatcccatgatgaactgcagcttctggtgatttttggcttctgataaacttgcttctaatgaactcgcttatgatga 24551531  T
Q  200 ccttgcttctgatga 214  Q
     || |||||||||||    
T  24551532 actcgcttctgatga 24551546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 9320627 - 9320828
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-tta 98  Q
    ||||||||||||||||||||||| ||  ||||||| ||||||| | ||||||  ||||||||| |||||| ||| ||||||||||| ||||||||  |||    
T  9320627 tttgaagaataagcatccaatgcgttcaaatcctttcaaaataattgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccaatta 9320726  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||||||||||||||| ||||||||||    |||||||||| || ||||||||||| || |||||||||||||||||||||||||||| | |||| |||||    
T  9320727 aacagcttttgaagccttaagttgcatcctctgatgaactgcagcttctggtgatttttagcttctgataaacttgcttctgatgaactcgcttctgatg 9320826  T
Q  199 ac 200  Q
    ||    
T  9320827 ac 9320828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 23185319 - 23185135
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||  ||||||||| |||||| |||   ||||||||| || ||||| || |    
T  23185319 tttgaagaataagcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattga 23185220  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | |||||||||||| ||||||  |||||||||||| || ||||||||||| ||||||||||||| ||||||||||||||||    
T  23185219 acaacctttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 23185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1237695 - 1237909
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||  ||||||||||||  ||||||| ||||||||||||||||  ||||||||  |||||| ||| ||||||||||| |||||||| ||||    
T  1237695 tttgaagaacaaatatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccggtcttctgcaatctttagacgaggttgaatccattaa 1237794  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||||||| ||||||||||   | ||||||| | || |||||||| || ||  ||||||||||||||||||||||||||| | |||| ||||||    
T  1237795 acagcttttgaagccttaagttgcatcccatgatgaattgcagcttctggtaatttttggcttctgataaacttgcttctgatgaactcgcttctgatga 1237894  T
Q  200 ccttgcttctgatga 214  Q
     |||| ||| |||||    
T  1237895 acttgtttcagatga 1237909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 6407806 - 6407958
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    ||||||||||||| |||||  ||||||||||| |||||| |||  |||||||||||||||||| |||||||||||||||||||||||||||||  |||||    
T  6407806 ccttccaaaatagccgttgtaatacttttccagtcttctgcaatcttagacgagtttgaatcctttaaacagcttttgaagctttaagttgcatctcctg 6407905  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||| || |||||||||||   || |||||||| ||||||||| ||||||    
T  6407906 atgaactgcagcttctggtgattcacaacttctgatgaacttgcttttgatga 6407958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17797480 - 17797680
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  | ||||| |||| ||| ||||||   ||||||||| ||||||  ||   ||||||||| |||||||| || |    
T  17797480 tttgaagaacaagcatccaatgccttcaattcctttcaaactagccgttgcatcacttttccagtcttctgtaatggttagacgagattgaatccattga 17797579  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| ||||||| |||||||||||||  ||||||||| || || ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  17797580 acaacttttgaggctttaagttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatgaacttgcttctgatgaatttgcttctgatga 17797679  T
Q  200 c 200  Q
    |    
T  17797680 c 17797680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 3598364 - 3598255
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttg 174  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||| ||||||    
T  3598364 ctttagacgagtttgaatctgttaaacaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttg 3598265  T
Q  175 cttctgatga 184  Q
    ||| ||||||    
T  3598264 cttatgatga 3598255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 14989522 - 14989369
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    ||||||||| ||| ||||| ||||||||||||||||||  ||| ||| |||||||||||||||| |||||| ||||||||||||||||||||||  ||||    
T  14989522 ccttccaaattagccgttgttatacttttccaatcttcagcaatcttcagacgagtttgaatcctttaaacggcttttgaagctttaagttgcatctcct 14989423  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||| | || |||||||||||   ||||||||||| ||||||||||||||||    
T  14989422 gatgaattgcagcttctggtgattcacagcttctgatgaacttgcttctgatga 14989369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 45538532 - 45538348
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||||||||| |||  ||||||| ||||||||| ||||||  ||||||||| |||||| ||| ||||||||||| |||||||| ||||    
T  45538532 tttgaagaacaagcatccaatgtcttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaa 45538433  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||| ||||||||||   | ||||||||| || ||||||||||| ||  |||| ||||||||| |||||||||||    
T  45538432 acaacttttgaagccttaagttgcatcccatgatgaactgcagcttctggtgatttttggcttatgataaactcgcttctgatga 45538348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 19156258 - 19156440
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||| |||||||||||  ||| ||| | |||||| |||    |||||||| || ||||| || |||||    
T  19156258 aagaacaagcatccaatgccttcaaatcctttcaaattagtcgttgcttcactcttctagtcttctgcaatgcatagacgagattaaatccattgaacag 19156357  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | ||||||||||||| |  ||||  || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19156358 cctttgaagctttaattcttgcatctcttgatgaactacaacttctggtgatcttcagcttctgatgaacttgcttctgatga 19156440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 43639863 - 43640032
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaacttt-agacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    |||| ||||||||||||||  ||||||||||| |||| | ||| ||| || ||||||||||||| | ||||| |||||||||||||||||||||  || |    
T  43639863 cctttcaaaatagtcgttgtcatacttttccagtcttttgcaatttttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcat 43639962  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||| || |||||||||||   ||||||||||| |  |||||||||||||| |||||| |||||||    
T  43639963 gatgaactgcatcttctggtgatacacagcttctgatgattttgcttctgatgaacttgcttctgatgac 43640032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16207364 - 16207530
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||| |||||| |||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  16207364 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtagttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattga 16207463  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttct 164  Q
    ||||| ||||||||||||||  |||||  ||||||||||||| | |||||||||||||| |||||||    
T  16207464 acagcgtttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttct 16207530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 39693597 - 39693794
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| |||||||||| |||||  ||| ||||| |||||| |||   ||||||||| |||||||| || ||||     
T  39693597 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcattgcttcactcttccagtcttctgcaatgcttagacgagattgaatccattgaacaa 39693696  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | |||||||||||||||  ||||  ||||||||| |||||||||||||||||||||||||||||||  || ||||| ||||||| ||| || |||||||    
T  39693697 cctttgaagctttaagtcttgcatctcctgatgagctacaacttctggtgatcttcagcttctgat-gacatgcttttgatgaacttgtttctgatgac 39693794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 21301107 - 21301255
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| |||||||||||||||||| ||| |||||| |||||| || ||  | |||||||||||||| |||| ||||  | ||||||||||    
T  21301107 caaaatagccgttgccatacttttccaatcttctgcaatctttaggcgagttagagtcattgaaacagcttttgaaactttgagttcaatttcctgatga 21301206  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| || |||||||||||   ||||||||||| ||||||||||||||||    
T  21301207 actgcagcttctggtgatacacagcttctgatgaacttgcttctgatga 21301255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 18151717 - 18151574
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    ||||||||| ||||||||| |||||||||||| |||||| ||| ||| ||||||||||||||||          ||||||||||||||||||||  | ||    
T  18151717 ccttccaaattagtcgttgttatacttttccagtcttctgcaatcttcagacgagtttgaatcc----------ttttgaagctttaagttgcatcttct 18151628  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||| ||||||||||||||   ||||||||||| ||||||||||||||||    
T  18151627 gatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatga 18151574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 12757852 - 12757670
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||||||  ||| || || |||||| |||   ||||||||| || ||||| || ||||     
T  12757852 aagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacat 12757753  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | ||| ||| |||||||  ||||  ||||||||||||| | || |||||||||||||||||||||| ||||||||||||||||    
T  12757752 cctttaaagttttaagtcttgcatctcctgatgaactagagctactggtgatcttcagcttctgatcaacttgcttctgatga 12757670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 30421517 - 30421354
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||| | |||| |||||||||||  ||||||||| |||||| |||   ||||||||| || ||||| || |||||    
T  30421517 aagaacaagcatccaatgccttcaaatccattcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacag 30421418  T
Q  104 cttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | |||||||||||| ||||||  | |||||||||| || ||||||||||| || ||||||||||    
T  30421417 cctttgaagctttatgttgcatcttctgatgaactgcagcttctggtgattttgagcttctgat 30421354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 24833149 - 24832965
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-tta 98  Q
    ||||| ||| ||||||||||||| ||  ||||| | |||| ||| | |||||  ||||||| | |||||| ||| | ||||||||| ||||||||  |||    
T  24833149 tttgaggaacaagcatccaatgcgttcaaatcccttcaaagtagccattgcttcacttttc-agtcttctgcaatccttagacgaggttgaatcccatta 24833051  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||||||||| ||||||||||    |||||||||| || ||||||||||| || ||||||| |||||||||||||||||||    
T  24833050 aacagcttttgaagccttaagttgcatcctctgatgaactgcagcttctggtgatttttagcttctaataaacttgcttctgatga 24832965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 18121202 - 18121033
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||  ||||||  ||| ||| | |||||| |||   ||||||||| || ||||| || |    
T  18121202 tttgaagaacaagcatccaatgcctttaaatcctttcaaaatagcagttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattga 18121103  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||| |||||| ||||||||  ||||  ||||||||||||| | |||||||||||||| ||||||||||    
T  18121102 acagcctttgaaactttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgat 18121033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 602809 - 602627
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| |||||||||| |||||  ||| ||| | |||||| |||   ||||||||| ||||||||  | ||||     
T  602809 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcattgcttcactcttcaagtcttctgcaatgcttagacgagattgaatccaatgaacaa 602710  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | ||||||| |||||||  |||| |||||||||||||  | ||||| |||||||| ||||| |||| ||||||||||||||||    
T  602709 cctttgaagttttaagtcttgcatttcctgatgaactttagcttcttgtgatctttagcttttgatgaacttgcttctgatga 602627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 17914521 - 17914710
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||| ||||||||  ||||||| ||||||||| ||||||  ||| || || |||||| |||   ||||||||| || ||||| || ||||     
T  17914521 aagaacaagcatctaatgccttcaaatcctttcaaaatagttgttgcttcactcttacagtcttctgcaatgcttagacgagattaaatccattgaacaa 17914620  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgctt 192  Q
    ||||||||||||||| |  ||||  |||| |||| ||||||||||| |||||||||||||||||||  |  ||||||||||||| ||||||    
T  17914621 cttttgaagctttaactcttgcaactcctaatgagctacaacttctagtgatcttcagcttctgat-gagatgcttctgatgaacttgctt 17914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 21932941 - 21933143
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    |||||| || |||||| |||||||||  ||||||| |||||||| ||||| |  ||| || || |||| | |||   ||||||||| || ||||| || |    
T  21932941 tttgaaaaacaagcatacaatgcctttaaatcctttcaaaatagccgttgtttcactctttcagtcttatgcaatgcttagacgagattaaatccattga 21933040  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||| | |||||||||||||||  ||||  |||||||||| || | ||||||||||| ||||||||||||| |||||||||||||| || || ||| ||||    
T  21933041 acaacctttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgataaacttccttctgat 21933140  T
Q  198 gac 200  Q
    |||    
T  21933141 gac 21933143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 33082919 - 33083073
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| |||  ||||||| |||   ||||||||| || ||||| || ||||     
T  33082919 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttctgatcttctgcaatgcttagacgagattaaatccattgaacaa 33083018  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||||||||||||||  |||||  |||||||||||| || ||||||||||||||    
T  33083019 cctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt 33083073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 17441896 - 17441732
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||||||||||||||||| ||  ||||||| |||||||||||||||| || | ||||| |||||| |||   ||||| ||| || | ||| || ||||     
T  17441896 aagaataagcatccaatgc-ttcaaatcctttcaaaatagtcgttgctttagtcttccagtcttctgcaatgcttagaggagattaagtccattgaacaa 17441798  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | ||| |||||||||||  ||||  ||||||||||||| | |||||||||||||||||||||||||    
T  17441797 cctttaaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgat 17441732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 19943304 - 19943488
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag-ctttt 108  Q
    ||||||||||||||||  ||||||| ||||||||| ||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || || || |||||    
T  19943304 aagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaatagcctttt 19943403  T
Q  109 gaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgctt 192  Q
    |||||||||||  |||||  |||||||||||| || ||||| |||||||| ||||||||||  |  ||||||||||||| ||||||    
T  19943404 gaagctttaagtcttgcatctcctgatgaacttcagcttctagtgatctttagcttctgat-gagatgcttctgatgaacttgctt 19943488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 13430694 - 13430545
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaag-ctttaagttgcacttcctgatg 134  Q
    |||||||| |||||  ||||||||| |||||||| ||| || ||| |||||| || ||| | ||||||||||||||  ||||||||| ||  ||||||||    
T  13430694 caaaatagccgttgtcatacttttctaatcttctgcaatttctaggcgagttagagtccttgaaacagcttttgaaaactttaagttccatctcctgatg 13430595  T
Q  135 aactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||  | |||||||||||   ||||||||||| ||||||||||||||||    
T  13430594 aactgtagcttctggtgatacacagcttctgatgaacttgcttctgatga 13430545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 16189045 - 16189200
Alignment:
Q  4 gaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaaca 102  Q
    |||||||||||||||||||||||  |||| || ||||||||||||||||  ||| ||||| |||||| |||   || |||||| || ||||| |||||||    
T  16189045 gaagaataagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcactcttccagtcttctgcaatggttggacgagattaaatccattaaaca 16189144  T
Q  103 gcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
     | ||||||||||||||  |||||  |||| ||||||| |  ||||||||||||||    
T  16189145 acctttgaagctttaagtcttgcatctcctaatgaacttcggcttctggtgatctt 16189200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 20382407 - 20382288
Alignment:
Q  80 gacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgctt 177  Q
    |||||| |||||||| || |||||| ||||||||||||||  |||||  |||||||||||| || ||||||||||||||  ||||||||| |  | ||||    
T  20382407 gacgagattgaatccattgaacagcctttgaagctttaagacttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgagat-gctt 20382311  T
Q  178 ctgatgaatttgcttttgatgac 200  Q
    |||||||| ||||||||||||||    
T  20382310 ctgatgaacttgcttttgatgac 20382288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 21288488 - 21288636
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| ||||||||||| |||||| ||| |||||| |||||| || ||  | |||||  ||||||| |||| ||||  | ||||||||||    
T  21288488 caaaatagccgttgccatacttttccagtcttctgcaatctttaggcgagttagagtcaatgaaacaaattttgaatctttgagttcaatttcctgatga 21288587  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| || ||| |||||||   ||||||||||| ||||||||||||||||    
T  21288588 actgcagcttgtggtgatacacagcttctgatgaacttgcttctgatga 21288636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 24646400 - 24646597
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    |||||||||||||||||||||   ||||||| ||||||||  ||||||| ||| ||  | |||| | |||   ||||||||| || ||||  || ||||     
T  24646400 aagaataagcatccaatgcctgcaaatcctttcaaaatagctgttgctacactcttttagtcttatgcaatgcttagacgagattaaatcaattgaacaa 24646499  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||||||||| |  ||||  || |||||||||| | ||||||||||||||||||||||||| ||  ||||||||||||| |||||| |||||||    
T  24646500 cctttgaagctttaactcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgat-aagatgcttctgatgaacttgcttctgatgac 24646597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 29693377 - 29693574
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| |||||| |||||| ||  ||||||| ||||||||| ||||||  ||| || || |||||| |||   ||||||||| || ||| | ||||||||    
T  29693377 aagaacaagcatacaatgctttcaaatcctttcaaaatagtggttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattaaacag 29693476  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
      |||| ||||||||||  ||||  |||| |||||||||||||| |||||||||||||||| ||||  |  ||||||||||||| |||||| |||||||    
T  29693477 tctttggagctttaagtcttgcatctcctaatgaactacaacttatggtgatcttcagcttatgat-gagatgcttctgatgaacttgcttctgatgac 29693574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 22745622 - 22745738
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttg 174  Q
    ||||||||| || ||||| || |||| | |||||||||||||||  ||||  ||||||||||||| | |||||||||||||||||||||||||  |  ||    
T  22745622 ttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgat-gagatg 22745720  T
Q  175 cttctgatgaatttgctt 192  Q
    ||||||||||| ||||||    
T  22745721 cttctgatgaacttgctt 22745738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 20255654 - 20255538
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| ||||||  ||   ||||||||| || ||||| || |||||    
T  20255654 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaatgcttagacgagattaaatccattgaacag 20255555  T
Q  104 cttttgaagctttaagt 120  Q
    | ||||| |||||||||    
T  20255554 cctttgacgctttaagt 20255538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 43774052 - 43774127
Alignment:
Q  126 ttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaa-tttgcttttgatgac 200  Q
    |||||||||||||||| |||||||||||    |||||||||| ||||||||||||||||| ||||||| |||||||    
T  43774052 ttcctgatgaactacagcttctggtgatacatagcttctgatgaacttgcttctgatgaactttgcttctgatgac 43774127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 45567919 - 45567778
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaacta-caacttctggtgatcttcagcttctgataaact 172  Q
    |||||||||||||||||||| |||||||||| |||||| ||||| ||||||  | ||||||||||| |   |||| ||||| | ||||||||||  || |    
T  45567919 ctttagacgagtttgaatccattaaacagctatttgaaactttaggttgcatctactgatgaactatcgctttctagtgatatacagcttctgaggaaat 45567820  T
Q  173 tgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
     |||||||||  | |||||| |||||| ||| ||||||||||    
T  45567819 agcttctgatagacttgcttctgatgaacttacttctgatga 45567778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 18321175 - 18321083
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||||||| || ||||| || |||| | |||||||||||||||  ||||  |||||||||||| || |||||||||||||||  ||||||||    
T  18321175 ttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctacttctgat 18321083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 1745339 - 1745393
Alignment:
Q  130 tgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||| || |||||||||||   ||||||||||| ||||||||||||||||    
T  1745339 tgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatga 1745393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 23263565 - 23263506
Alignment:
Q  154 cttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||||||||||||| | ||||||||||||| |  ||||| |||||| ||||||||||||||    
T  23263565 cttcagcttctgatgatcttgcttctgatg-aggtgcttctgatgaacttgcttctgatga 23263506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 26759211 - 26759425
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| |||||| ||| |||||| ||| ||||||||||||||    
T  26759211 tttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgttatacttttccagtcttctgcaatctttaggcgaatttgaatccgttaa 26759310  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||| ||||||    
T  26759311 acaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaatttgcttctgatgaatttgcttctgatga 26759410  T
Q  200 ccttgcttctgatga 214  Q
    |||||| ||||||||    
T  26759411 ccttgcctctgatga 26759425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 29138481 - 29138283
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| |||||| |||  |||||||| |||||||| ||||||    
T  29138481 tttgaagaataagcatccaatgccttctaatccttccaaaatagttgttgctatacttt-ccagtcttctgcaatcttagacgattttgaatctgttaaa 29138383  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||    
T  29138382 cagcttttgaaactttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgac 29138283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 15517031 - 15517215
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| |    
T  15517031 tttgaagaataagcatccaatgccttcaaatccttccaaaatagccgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttga 15517130  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||  | |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  15517131 acaacttttgaagctttaagttgcatcttctgatgaactacaacttctggtgattctcaacttctgataaacttgcttctgatga 15517215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 30743042 - 30743256
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||| |||||||||||||  ||||||| ||||||| |||||||| | | |||||| |||||| ||| |||||||||||||||||||| ||||    
T  30743042 tttgaagaataaacatccaatgccttcaaatcctttcaaaataatcgttgctttgcctttccagtcttctgcaatctttagacgagtttgaatccattaa 30743141  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  |||||||||||| |||||||| || ||  ||||||| ||||||| |||||||||||||| |||||| ||||||    
T  30743142 acaacttttgaagctttaagttgcatctcctgatgaactgcaacttctcgtaattctcagcttatgataaatttgcttctgatgaacttgcttctgatga 30743241  T
Q  200 ccttgcttctgatga 214  Q
    |||| ||| ||||||    
T  30743242 ccttacttttgatga 30743256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11993950 - 11994164
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||| ||  ||||| | |||| ||| |||||||  ||| ||||| |||||| ||| | ||||||||||||||||||||| |    
T  11993950 tttgaagaacaagcatccaatgctttcaaatcccttcaaattagccgttgcttcactattccagtcttctgcaatccttagacgagtttgaatccgttga 11994049  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||| ||||||||||||  ||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||| |  ||| ||||||    
T  11994050 acatcttttgaaactttaagttgcatctcctgatgaactacagcttctggtgattcacagcttctgataaacttgcttctgatgaactatcttatgatga 11994149  T
Q  200 ccttgcttctgatga 214  Q
     ||||||||||||||    
T  11994150 acttgcttctgatga 11994164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 3245516 - 3245333
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    ||||||||||||||||| ||||||||  ||| ||| |||||||| |||||||||||||||||| |||||| |||  |||||||||||||||||| | |||    
T  3245516 tttgaagaataagcatcaaatgcctttcaattctttcaaaatagccgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa 3245417  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| ||| ||||||||||||||||  |||||||||||| || |||||||||||   ||||||||||| ||||||||||| ||||    
T  3245416 cagttttggaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatga 3245333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 42243771 - 42243927
Alignment:
Q  29 aatccttccaaaatagtcgttgctatacttttccaatcttctacaacttt-agacgagtttgaatccgttaaacagcttttgaagctttaagttgcactt 127  Q
    ||||||| ||||||||| ||||||  ||||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  |    
T  42243771 aatcctttcaaaatagttgttgcttcacttttccagtcttctgcaatttttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatct 42243870  T
Q  128 cctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||| |||||||||||  |||| || ||||||| |||||||||||||    
T  42243871 cctgatgaactacagcttctggtgattctcagtttttgataaatttgcttctgatga 42243927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 4887084 - 4887268
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  |||| || ||||||||||||||||||||||||||| |||| | ||| ||| |||| ||||| ||||| || |    
T  4887084 tttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcgttgctatacttttccagtcttttgcaatcttaagacaagtttaaatccattga 4887183  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||  || ||||||||| || |||||||||||  ||||||||| || ||||||||||||||||    
T  4887184 acaacttttgaagctttaagttgcatatcttgatgaactgcagcttctggtgattctcagcttctaatgaacttgcttctgatga 4887268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 41566505 - 41566323
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    |||||||| |||||||||||||  ||||||| |||||||| |||||||  ||||||| | |||||| |||   ||||||||| || ||||| || || ||    
T  41566505 aagaataaacatccaatgccttcaaatcctttcaaaatagacgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaatag 41566406  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||||  ||||  |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  41566405 cttttgaagctttaagtcttgcatctcctgatgaactacaacttctgatgatcttcagcttctgatgaacttgcttctgatga 41566323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 28464392 - 28464240
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| |||||||| ||||| |||||||||  | |||||| |||  |||||||||||||||||| | ||||||||||||||||||||||||| |  |||||    
T  28464392 cctttcaaaatagccgttgttatacttttttagtcttctgcaatcttagacgagtttgaatccttgaaacagcttttgaagctttaagttgtatctcctg 28464293  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||| || |||||||||||   ||||||||||||||||||||||||||||    
T  28464292 atgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatga 28464240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 33022726 - 33022910
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||||||||||  ||||||| |||| |||||||||||  ||||||||| |||||| |||   ||||| ||| || ||||| || |    
T  33022726 tttgaagaacaaacatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccattga 33022825  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||| |||||||||||| ||||||  |||||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||||    
T  33022826 acagcctttgaagctttatgttgcatctcctgatgaactgcaaattctggtgattttcagcttctgatgaacttgcttctgatga 33022910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 33933330 - 33933547
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-tta 98  Q
    ||||| ||| ||||||||||||| ||  ||||||| ||||||||| ||||||  ||||||||| |||| | ||| | ||||||||| ||||||||  |||    
T  33933330 tttgaggaacaagcatccaatgcgtttaaatcctttcaaaatagttgttgcttcacttttccagtcttttgcaatccttagacgaggttgaatcccatta 33933429  T
Q  99 aacagctttt--gaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttga 196  Q
    |||| |||||  ||||||||||||||||    |||||||||| |||||| |||||||  |||||||||||||||||||||||||||||| |  ||| |||    
T  33933430 aacaacttttttgaagctttaagttgcatcctctgatgaactgcaacttatggtgattctcagcttctgataaacttgcttctgatgaactgtcttctga 33933529  T
Q  197 tgaccttgcttctgatga 214  Q
    ||| ||||||||||||||    
T  33933530 tgaacttgcttctgatga 33933547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 26765560 - 26765674
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||| |||||| ||| |||||| ||| ||||||| ||||||    
T  26765560 tttgaagaataagcatccaatgccttcaaatccttccaaaatagttgttgctatacttttccagtcttctgcaatctttaggcgaatttgaat-cgttaa 26765658  T
Q  100 acagcttttgaagctt 115  Q
    ||||||||||||||||    
T  26765659 acagcttttgaagctt 26765674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 35986279 - 35986116
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaa 136  Q
    ||||||||||||||| | ||||||||| |||||| ||| ||||| |||||| || ||| | ||||| |||||||| |||||||||  |  ||||||||||    
T  35986279 caaaatagtcgttgccacacttttccagtcttctgcaattttaggcgagttagagtccttgaaacatcttttgaaactttaagttcaatctcctgatgaa 35986180  T
Q  137 ctacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    || ||||||||||||||   ||||||||||| ||||||||||||||||||| |||| |||||||    
T  35986179 ctgcaacttctggtgattcacagcttctgatgaacttgcttctgatgaattagcttctgatgac 35986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 9089053 - 9089188
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||||||||||||||||||  ||||||||||| |||||| |||   ||||||||||||| ||| |||||||||||||||| ||||||||||||  |||||    
T  9089053 ccttccaaaatagtcgttgtaatacttttccagtcttcttcaatcatagacgagtttgattcctttaaacagcttttgaaactttaagttgcatctcctg 9089152  T
Q  132 atgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||||| || |||||||||||   |||||||||||    
T  9089153 atgaactgcagcttctggtgattcacagcttctgat 9089188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 32160903 - 32161029
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt 173  Q
    |||||||||||||||||||| ||||||| || |||||| ||||| ||||||  | |||||||||||||  |||||||||| | |||||||||||| ||||    
T  32160903 ctttagacgagtttgaatccattaaacaactatttgaaactttaggttgcatcttctgatgaactacagtttctggtgatatacagcttctgatagactt 32161002  T
Q  174 gcttctgatgaatttgcttttgatgac 200  Q
    |||||||||||| |||||| |||||||    
T  32161003 gcttctgatgaacttgcttctgatgac 32161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 14086613 - 14086428
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-tta 98  Q
    ||||| ||| ||||||||||||| ||  ||||  | |||||||| |||||||  ||||||||| |||||| ||| | ||||||||| ||||||||  |||    
T  14086613 tttgaggaacaagcatccaatgcattcaaatcacttcaaaatagccgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccatta 14086514  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||||||||| ||||||||||    |||||||||| || |||||||| || || ||||| |||||||||||||||||||||    
T  14086513 aacagcttttgaagccttaagttgcatcctctgatgaactgcagcttctggtaatttttagcttttgataaacttgcttctgatga 14086428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 25930209 - 25930087
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    ||||| ||| ||| ||||| |||||||||||| |||| | ||| |||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||    
T  25930209 ccttctaaattagccgttgttatacttttccagtcttatgcaatctttagacgagtttgaatcctttaaacaacttttgaagctttaagttgcatctcct 25930110  T
Q  131 gatgaactacaacttctggtgat 153  Q
    |||||| | || |||||||||||    
T  25930109 gatgaattgcagcttctggtgat 25930087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 31117939 - 31118088
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||| ||| |||| |||||||||||  ||||||||| |||||| |||   |||||||||||| ||||||||||    
T  31117939 tttgaagaacaagcatccaatgccttcaaattctttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagacgagtttaaatccgttaa 31118038  T
Q  100 ac-agcttttgaagctttaagttgcacttcctgatgaactacaacttctg 148  Q
    || | |||||||||||||| ||||||  |||||||||||| || ||||||    
T  31118039 acaaccttttgaagctttatgttgcatctcctgatgaactgcagcttctg 31118088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 6512490 - 6512322
Alignment:
Q  17 ccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttgaagctt 115  Q
    ||||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||  |||   ||||||||| || |||||  | |||| | ||||||||||    
T  6512490 ccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttcagcaatgcttagacgagattaaatccactgaacaacctttgaagctt 6512391  T
Q  116 taagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||  ||||  ||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||||    
T  6512390 taagtcttgcatctcctgatgaactacaacttctagtgatctt--gcttctgatgaacttgcttctgatga 6512322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 26784496 - 26784602
Alignment:
Q  80 gacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgctt 177  Q
    |||||| |||||||| || |||||| ||| ||||||||| |  ||||  ||||| ||||||||| ||||||||||||||||||||||||| |||||||||    
T  26784496 gacgagattgaatccattgaacagcctttaaagctttaaatcttgcatctcctgctgaactacagcttctggtgatcttcagcttctgatgaacttgctt 26784595  T
Q  178 ctgatga 184  Q
    |||||||    
T  26784596 ctgatga 26784602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 5430044 - 5430130
Alignment:
Q  98 aaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||| ||||||||||  |||||||||||| || ||||||||||| || | |||||||| ||||||||||||||||    
T  5430044 aaacagcttttgaagccttaagttgcatctcctgatgaactgcagcttctggtgatttttaccttctgatgaacttgcttctgatga 5430130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 10848857 - 10849010
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaacttt-agacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    |||| ||||||||  | ||| ||||||||||| | |||| ||| ||| || ||||||||||||| | ||||| |||||||||||||||||||||  || |    
T  10848857 cctttcaaaatagctgatgccatacttttccagttttctgcaatttttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcat 10848956  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||| || |||||||||||   |||||| |||| ||||||||| ||||||    
T  10848957 gatgaactgcagcttctggtgatacacagcttatgatgaacttgcttttgatga 10849010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 28139671 - 28139755
Alignment:
Q  3 tgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtt 87  Q
    |||||||||||||||||||| |||  ||||||| |||||||||||||||||||||||| || |||||||||   |||||||||||    
T  28139671 tgaagaataagcatccaatgtctttcaatcctttcaaaatagtcgttgctatactttttcagtcttctacattcttagacgagtt 28139755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 89493 - 89339
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| |||||| |||||| ||  ||| ||| ||||||||||||||||  ||| |||   |||||| ||| | ||||||||| || ||||| || ||||     
T  89493 aagaacaagcatgcaatgctttcaaattctttcaaaatagtcgttgcttcactcttctggtcttctgcaattcttagacgagattaaatccattgaacaa 89394  T
Q  104 cttttgaagctttaagtt--gcacttcctgatgaactacaacttctggtgatctt 156  Q
    ||||||||||||||||||  |||  ||||||||||||||||||||||||||||||    
T  89393 cttttgaagctttaagttttgcatctcctgatgaactacaacttctggtgatctt 89339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 30115853 - 30115767
Alignment:
Q  98 aaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||| |||||||||||||||||||||  |||||||||||| || |||||||||||   ||||||||||| ||||||||||| ||||    
T  30115853 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatga 30115767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 35932054 - 35931905
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttg-aagctttaagttgcacttcctgatg 134  Q
    ||||||||||||||| ||||||||||| |||||| ||| || ||| |||||| || ||| | ||||| |||||| || ||||||||| ||| || |||||    
T  35932054 caaaatagtcgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaaactttaagttccacctcttgatg 35931955  T
Q  135 aactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||  | |||||||||||   || |||||||| |||| |||||||||||    
T  35931954 aactgtaccttctggtgatacacaacttctgatgaactagcttctgatga 35931905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 23412943 - 23412865
Alignment:
Q  106 tttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||  ||||  |||||||||||| || ||||||||||||||  ||||||||| ||||||||||||||||    
T  23412943 tttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgatga 23412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 200
Target Start/End: Original strand, 21660302 - 21660466
Alignment:
Q  38 aaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaa 136  Q
    |||||||| ||||| ||||||||||  |||||| ||| ||||||||||||| || ||| | |||||||||||||| |||| ||||  | ||||  |||||    
T  21660302 aaaatagttgttgccatacttttccggtcttctgcaatctttagacgagttagagtccttgaaacagcttttgaaactttgagttcaatttccaaatgaa 21660401  T
Q  137 ctacaacttctggtgatcttcagcttctgataaacttgcttctgatgaa-tttgcttttgatgac 200  Q
    ||  | |||||||||||    | |||||||| | || |||||||||||| ||||||| |||||||    
T  21660402 ctgtagcttctggtgatacataacttctgatgacctagcttctgatgaactttgcttctgatgac 21660466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 21910622 - 21910776
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||| ||||||||  ||||||||| |||| |  ||   ||||||||| || ||||  || |||||    
T  21910622 aagaacaagcatccaatgccttcaaatcctttcaaaataatcgttgcttcacttttccagtcttttgtaatgcttagacgagattaaatcaattcaacag 21910721  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||||| ||||||||  |||||  ||||||||||||  | ||||||||||||||    
T  21910722 cctttgacgctttaagtcttgcatctcctgatgaactttagcttctggtgatctt 21910776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 7745768 - 7745555
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||| ||||||  ||| ||| | |||||| |||   || || | | || ||||| || |    
T  7745768 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttctagtcttctccaatgcttggatgcgattaaatccattga 7745669  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||| | ||||||||||||||  || ||  |||||||| ||| || ||||| ||||||||  |||||||||  |  ||||| ||||||| |||||| | ||    
T  7745668 acaacctttgaagctttaagtcttacatctcctgatgtacttcagcttcttgtgatctt--gcttctgat-gagatgcttttgatgaacttgcttcttat 7745572  T
Q  198 gaccttgcttctgatga 214  Q
    |||||||||||||||||    
T  7745571 gaccttgcttctgatga 7745555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 9398689 - 9398644
Alignment:
Q  129 ctgatgaactacaacttctggtgatcttcagcttctgataaacttg 174  Q
    |||||||||| ||||||||||||||||| |||||||||| ||||||    
T  9398689 ctgatgaacttcaacttctggtgatcttgagcttctgatgaacttg 9398644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 28139773 - 28139834
Alignment:
Q  139 acaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||| |||||||  |||||||||||||||||| ||||||||||| ||| || |||||||    
T  28139773 acaacttttggtgattctcagcttctgataaacttacttctgatgaacttggttctgatgac 28139834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30115912 - 30115855
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatactt 58  Q
    ||||||||||||||||| |||||| |  ||||||| |||||||||||||| |||||||    
T  30115912 tttgaagaataagcatcaaatgcccttcaatcctttcaaaatagtcgttgttatactt 30115855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 17815034 - 17815229
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||| ||||| ||  ||||||| || |||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |||||    
T  17815034 aagaacaagcatctaatgctttcaaatcctttcagaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacag 17815133  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | |||||||||||||||  ||||  || ||||||| |  | ||||||||||||||  ||||||||| |  | |||||||||||| |||||  |||||||    
T  17815134 cctttgaagctttaagtcttgcatctcttgatgaaatttagcttctggtgatctt--gcttctgatgagat-gcttctgatgaacttgctactgatgac 17815229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 21072187 - 21072147
Alignment:
Q  127 tcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  21072187 tcctgatgaacttcagcttctggtgatcttcagcttctgat 21072147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 12352758 - 12352692
Alignment:
Q  133 tgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||| || |||||||||||||||||||||||||  |  ||||| ||||||| ||||||||||||||    
T  12352758 tgaacttcagcttctggtgatcttcagcttctgat-gagatgcttttgatgaacttgcttttgatgac 12352692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 23391604 - 23391505
Alignment:
Q  82 cgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctga 181  Q
    |||| |||||||| | |||||||||||||||||||| ||||  |||  |||||| || || |||||||||| |||  |||| |||| |||||||||||||    
T  23391604 cgagcttgaatccttgaaacagcttttgaagctttaggttgatctt-ttgatgatctgcagcttctggtgaactt--gcttatgatgaacttgcttctga 23391508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 23478545 - 23478614
Alignment:
Q  129 ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaa-tttgcttttgat 197  Q
    ||||||||||  | ||||||||||| | ||||||||||| |||||||||||| |||| ||||||| ||||    
T  23478545 ctgatgaactgtagcttctggtgatatacagcttctgatgaacttgcttctgttgaactttgcttctgat 23478614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 9221 - 9403
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  || || ||||||||||||||||||    
T  9221 tttgaagaataagcatccaatgccttctaatccttccaaaatagtcgttgctatacttttccaatcttctgcaatctttgatgagtttgaatccgttaaa 9320  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatg 183  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  9321 cagcttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaacttgcttctgatg 9403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 21618310 - 21618510
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||    
T  21618310 tttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctttacttttccagtcttctacaatctttagaagagtttgaatccgttaa 21618409  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  | ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||| |||||| ||||||    
T  21618410 acaacttttgaagctttaagttgcatcttctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatga 21618509  T
Q  200 c 200  Q
    |    
T  21618510 c 21618510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16336193 - 16336403
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaac-tttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||||| ||||    
T  16336193 tttgaagaataagcattcaatgccttctaatccttccaaaatagtcgttgctatacttttccagtcttctgcaatgtttagacgagtttgaatcctttaa 16336292  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||| ||||||||  ||||||||| |||||||||||||||||  |||||||||||||||    ||||||||||| ||||||  |||||    
T  16336293 acaacttttgaagcttcaagttgcatctcctgatgatctacaacttctggtgattctcagcttctgataaa----cttctgatgaacttgcttaagatga 16336388  T
Q  200 ccttgcttctgatga 214  Q
    |||||||||||||||    
T  16336389 ccttgcttctgatga 16336403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 19833115 - 19832901
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||| ||||||||||||| ||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| ||||||| |||||||||||||||||    
T  19833115 tttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccgttaa 19833016  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||  |||||||||||||| |||||||  |||||| ||| || ||||||    
T  19833015 acagcttttaaagctttaagttgcatctcctgatgaactacatcttctggtgattctcagcttctgataatcttgctttggatgaacttgtttctgatga 19832916  T
Q  200 ccttgcttctgatga 214  Q
    |||||||||||||||    
T  19832915 ccttgcttctgatga 19832901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22076490 - 22076290
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||| ||||| ||  ||||||||||||||||||||||||||||||||| | |||||| ||| |||||||||||||| ||||| ||||    
T  22076490 tttgaagaataagcatcaaatgctttccaatccttccaaaatagtcgttgctatacttttcgagtcttctgcaatctttagacgagtttaaatcctttaa 22076391  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||   ||||||||||| ||||||||||||||||  |||||| ||||||    
T  22076390 acagcttttaaagctttaagttgcatctcctgatgaactacatcttctggtgattcacagcttctgatgaacttgcttctgatgaccttgcttctgatga 22076291  T
Q  200 c 200  Q
    |    
T  22076290 c 22076290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 15954769 - 15954953
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||| || |||||| |||||||||  ||||||| |||| |||||||||||  | ||||||| |||||| ||| ||||||| |||||||||||||||||    
T  15954769 tttgaataacaagcattcaatgccttcaaatcctttcaaattagtcgttgcttcatttttccagtcttctgcaatctttagaagagtttgaatccgttaa 15954868  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||||||||||||  || |||||||||||| |||||||| ||  |||||||||||||||||||||||||||||    
T  15954869 acagcttttgaagctttaagttgcatctcttgatgaactacagcttctggtaattctcagcttctgataaacttgcttctgatga 15954953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 12349059 - 12349211
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||| | |||    
T  12349059 tttgaagaataagcatccaatgcctttcaatcctttcaaaatagtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa 12349158  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgat 153  Q
    |||||||||||||| |||||||||  |||||||||||| || |||||| ||||    
T  12349159 cagcttttgaagctctaagttgcatctcctgatgaactgcagcttctgatgat 12349211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 16877279 - 16877463
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| |||| |||||||||| ||||  |||||||  || ||||||||||||  |||||  || |||||| ||| |||||||||||||||||||| ||||    
T  16877279 tttgaggaattagcatccaattccttcaaatccttttaagatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgaatccattaa 16877378  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||  ||||||||||||||||||| |||||||   ||||||||||| ||||||||||||||||    
T  16877379 acaacttttgaagctttaagttgcatctcctgatgaactacaacttttggtgattcacagcttctgatgaacttgcttctgatga 16877463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 20488001 - 20487818
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-tta 98  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||| |||||||  |||||| || |||||| ||| ||||||||||| ||||| ||  |||    
T  20488001 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagccgttgcttcacttttacagtcttctgcaatctttagacgaggttgaaccccatta 20487902  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgat 182  Q
    |||| |||||||||| ||||||||||    |||||||||| |||||||| ||||| || |||||||||||||||||||||||||    
T  20487901 aacaacttttgaagccttaagttgcatcctctgatgaactgcaacttctagtgatttttagcttctgataaacttgcttctgat 20487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 12423327 - 12423435
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||| |||||| ||   |||||||||||||||||| |||||    
T  12423327 tttgaagaataagcatacaatgccttccaatcctttcaaaatagtcgttgctatacttttccagtcttctgcattcttagacgagtttgaatccattaaa 12423426  T
Q  101 cagcttttg 109  Q
    |||||||||    
T  12423427 cagcttttg 12423435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 33352009 - 33351828
Alignment:
Q  2 ttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaac 101  Q
    ||||||||||| |||||||||  ||  ||||||| |||||||| | |||||||||||||||| |||||| ||   |||||||||| ||||||| | ||||    
T  33352009 ttgaagaataaacatccaatgtttttcaatcctttcaaaatagcc-ttgctatacttttccagtcttctgcactcttagacgagtgtgaatccttgaaac 33351911  T
Q  102 agcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||| |||||||||||||  ||| |||||| | ||  ||||||||||   ||||||||||| ||||||||||||||||    
T  33351910 agcttttgaggctttaagttgcatctcccgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatga 33351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 19066074 - 19065926
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| ||||||||||| |||||| ||| || ||| |||||| || ||| | |||||||||||||||||||||| | ||  |||||||||    
T  19066074 caaaatagccgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacagcttttgaagctttaagatccatctcctgatga 19065975  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| || ||||||||||| | ||||||||||| ||||||||||||||||    
T  19065974 actgcagcttctggtgatatacagcttctgatgaacttgcttctgatga 19065926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 32544331 - 32544517
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||| |||||||||||||  ||||||| |||||||| |||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  32544331 tttgaagaataaacatccaatgcctttaaatcctttcaaaatagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattga 32544430  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | ||||||||||||||  |||||  ||||||||||||| | ||| ||||||| ||||||||||||| ||||||| ||||||||    
T  32544431 acaacctttgaagctttaagtcttgcatctcctgatgaactagagcttatggtgattttcagcttctgatgaacttgcatctgatga 32544517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20730787 - 20730603
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||||||||||  ||||||| |||| |||||||||||  ||||||||| |||||| |||   ||||| ||| || ||||| || |    
T  20730787 tttgaagaacaaacatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatacttagatgagattaaatcccttga 20730688  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||| |||||||||||  ||| ||  |||||||||||| || ||||| ||||| |||||||| |||| ||||||||||||||||    
T  20730687 acagcctttgaagctttttgttacatctcctgatgaactgcagcttctagtgattttcagcttatgatgaacttgcttctgatga 20730603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 22802207 - 22802391
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||| ||| |||| | ||||||| |  ||||||||| || ||| |||   |||||| |  || ||||| || |    
T  22802207 tttgaagaacaagcatccaatgcctttaaattctttcaaacttgtcgttgtttcacttttccagtcgtctgcaatgcttagacaatattaaatccattga 22802306  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | |||||||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  22802307 acaacctttgaagctttatgttgcatctcctgatgaactacaacttctggtgattttcagcttctgatgaacttgcttctaatga 22802391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 26972311 - 26972109
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||||||||||  ||||||| ||||||||| ||||||  ||| ||| | |||||| |||   ||||||||| || ||||| || |    
T  26972311 tttgaagaacaaacatccaatgcctttaaatcctttcaaaatagttgttgcttcactcttcaagtcttctgcaatgcttagacgagattaaatccattga 26972212  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||| | |||||||||||||||  ||||  |||||||||| || | ||||||||||| ||| ||||||||| ||||||||||| || || |||||| ||||    
T  26972211 acaacatttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttctgcttctgatgaacttgcttctaataaacttgcttctgat 26972112  T
Q  198 gac 200  Q
    |||    
T  26972111 gac 26972109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 9717909 - 9718078
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaac-tttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||| ||||||||  ||||||| ||||||||| ||||||  ||| ||||| ||||||||||  |||||||||| || ||||| || |    
T  9717909 tttgaagaacaagcatcaaatgcctttaaatcctttcaaaatagttgttgcttcactcttccagtcttctacaatgtttagacgagattaaatccattga 9718008  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||| | ||||||||||||||  |||||  ||||||||||||| | ||||| |||||||| | ||||||||    
T  9718009 acaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctagtgatctttaacttctgat 9718078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 18435622 - 18435803
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||||||| | |||| |  || | ||||||||| || ||||| || |    
T  18435622 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttctagtcttttgaaattcttagacgagattaaatccattga 18435721  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttct 179  Q
    | | | ||  ||||||||||  |||||  ||||||||||||| | ||||| ||||||||||||||||||| |||||||||||    
T  18435722 ataaccttcaaagctttaagtcttgcatctcctgatgaactagagcttctagtgatcttcagcttctgatgaacttgcttct 18435803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 25597558 - 25597738
Alignment:
Q  14 catccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttgaag 112  Q
    |||||||||||||  ||||||| | |||||| ||| |||  ||| ||||| ||||||||||   ||||||||| || ||||| || |||| | |||||||    
T  25597558 catccaatgccttcaaatcctttcgaaatagccgtcgcttcactcttccagtcttctacaatgcttagacgagattaaatccattgaacatcctttgaag 25597657  T
Q  113 ctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgctt 192  Q
    ||||||||  ||||  |||||||||||||||||||||||||||||||||||| ||||  |  ||||||||||||| ||||||    
T  25597658 ctttaagtcttgcatgtcctgatgaactacaacttctggtgatcttcagcttatgat-gagatgcttctgatgaacttgctt 25597738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 12715499 - 12715318
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||||| |||| |||||| ||  |||| || ||||||||||||||||  ||| || ||||||||| |||   ||||||||| || ||||| || |||||    
T  12715499 aagaataggcatacaatgctttcaaatcatttcaaaatagtcgttgcttcactctttcaatcttctgcaatgcttagacgagattaaatccattgaacag 12715400  T
Q  104 c-ttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | ||||||||||||||||  ||||  ||||||||||||||||||||| ||||||||  ||||||||| ||||| ||||||||||    
T  12715399 ccttttgaagctttaagtcttgcatctcctgatgaactacaacttctagtgatctt--gcttctgatgaacttccttctgatga 12715318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 139355 - 139267
Alignment:
Q  96 ttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||||| ||||||||||    ||||||||| |||| |||||||||| || |||||||||||||||||||||||||||    
T  139355 ttaaacagcttttgaagccttaagttgcatcctctgatgaacgacaatttctggtgatttttagcttctgataaacttgcttctgatga 139267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 147376 - 147288
Alignment:
Q  96 ttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||||| ||||||||||    ||||||||| |||| |||||||||| || |||||||||||||||||||||||||||    
T  147376 ttaaacagcttttgaagccttaagttgcatcctctgatgaacgacaatttctggtgatttttagcttctgataaacttgcttctgatga 147288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 21235256 - 21235363
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgct 176  Q
    ||||||||| || ||||| || |||| | ||| |||||||| ||||||  |||||||||||| || ||||| ||||| ||||||||||||| ||||||||    
T  21235256 ttagacgagattaaatccattgaacaacctttaaagctttatgttgcatctcctgatgaactgcagcttctagtgattttcagcttctgatgaacttgct 21235355  T
Q  177 tctgatga 184  Q
    ||||||||    
T  21235356 tctgatga 21235363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 13602242 - 13602439
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||||||||||||||||||||  | || || ||||||||| ||||||  ||| ||||| |||||| |||   |||||| || || ||||| || ||||     
T  13602242 aagaataagcatccaatgccttcaattcatttcaaaatagtggttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaa 13602341  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||||||||||  |||||  ||||||||||||| | ||||| ||||||||| |||| ||||  |  ||||||||||||| |||||| |||||||    
T  13602342 cctttgaagctttaagtcttgcatctcctgatgaactatagcttcttgtgatcttcggcttttgat-gagatgcttctgatgaacttgcttctgatgac 13602439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 21625167 - 21625333
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||| |||||||||  ||| ||| |||| ||| ||||||| |||| |||||||||||| |||   ||||||||| || ||||| || |    
T  21625167 tttgaagaacaagcatgcaatgccttcaaatgctttcaaa-tagccgttgctttactcttccaatcttctgcaatgcttagacgagattaaatccattga 21625265  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||| | ||||||||| |||||  ||||  |||||||||   |||||||||||||||||||||||||||||    
T  21625266 acaacctttgaagctgtaagtcttgcatctcctgatgag--acaacttctggtgatcttcagcttctgat 21625333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 15302270 - 15302386
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||||||| |||||||  ||||||||| |||||| |||  |||||||||| || ||||| || ||||     
T  15302270 aagaacaagcatccaatgcctttaaatcctttcaaaatagccgttgcttcacttttccagtcttctgcaatgtttagacgagattaaatccattgaacaa 15302369  T
Q  104 cttttgaagctttaagt 120  Q
    | ||||| |||||||||    
T  15302370 cctttgacgctttaagt 15302386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 15531707 - 15531509
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||  ||||| | |||| ||| | |||||| |||   ||||||||| || ||| | || |    
T  15531707 tttgaagaacaagcatccaatgccttcaaatcctttcaaaataaccgttgttttactcttctagtcttctgcaatgcttagacgagattaaattcattga 15531608  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||| | ||| |||||||||||  ||||  | ||||||||||||||||||||||||||||  | |||||||  |  ||||||||||||| |||||| ||||    
T  15531607 acaacctttcaagctttaagtcttgcatcttctgatgaactacaacttctggtgatcttatgattctgat-gagatgcttctgatgaacttgcttctgat 15531509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16265233 - 16265049
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||| ||  || |||| |||  || ||||||||  ||||||||| || | | |||   ||||| ||| || ||||| || |    
T  16265233 tttgaagaacaagcatccaatgcattcaaaacctttcaatctactcgttgcttcacttttccagtcctgtgcaatgcttagatgagattaaatccattga 16265134  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | ||| |||||||| ||||||  || ||| ||||| || ||||||||||| ||||||||||||| ||||||||||||||||    
T  16265133 acaacctttcaagctttatgttgcatctcttgacgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 16265049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 19482933 - 19483001
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctga 211  Q
    ||||||||||||| |||||||| || ||||||||||||||||| |||| | |||||| |||||||||||    
T  19482933 cttctggtgatctgcagcttctaatgaacttgcttctgatgaacttgcatctgatgaacttgcttctga 19483001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 29918083 - 29918266
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||||  |||||||  |||| || |||| |||||||||||  |||||||||||||||| |||   ||||||||| || |||||  | |    
T  29918083 tttgaagaacaagcatctgatgccttcaaatcttttcaaactagtcgttgcttcacttttccaatcttctgcaatgcttagacgagattaaatcc-atga 29918181  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | ||||||||||||||  |||||  ||||||||||||||| |||||| ||| |||  |||||||||  |||||||||| ||||    
T  29918182 acaacctttgaagctttaagtcttgcatctcctgatgaactacagcttctgatgaactt--gcttctgatggacttgcttctaatga 29918266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 13435626 - 13435799
Alignment:
Q  29 aatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcac 125  Q
    ||||||| ||||||||||||||||  ||| |||||||||||| |||   ||| ||||| || ||||| || || | | |||||||||||||||  ||||     
T  13435626 aatcctttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcttaaacgagattaaatccattgaaaatcctttgaagctttaagtcttgcat 13435725  T
Q  126 ttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
     |||||||||||| || ||| ||||||||||| |||||||||  |  ||||| ||||||| |||||| |||||||    
T  13435726 ctcctgatgaacttcagcttatggtgatcttctgcttctgat-gagatgcttttgatgaacttgcttctgatgac 13435799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 17608331 - 17608222
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagctt--ttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttg 174  Q
    ||||| ||| ||||||||  ||||||||||  ||||| ||| | ||||||  | ||||||||||| | ||||||||||| | ||||||||||| ||||||    
T  17608331 ttagatgaggttgaatccaataaacagcttatttgaaacttcaggttgcatcttctgatgaactatagcttctggtgatatacagcttctgatgaacttg 17608232  T
Q  175 cttctgatga 184  Q
    ||||||||||    
T  17608231 cttctgatga 17608222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 19086343 - 19086399
Alignment:
Q  127 tcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||| || |||||||||||||||||| |||||| ||||||||||||||||    
T  19086343 tcctgatgaacttcagcttctggtgatcttcagc-tctgatgaacttgcttctgatga 19086399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 22386928 - 22387053
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgc 175  Q
    ||||| ||| ||||||||  ||||||||| |||||| ||||| ||||||  | ||||||||||  | |||||||||||   |||||| |||| |||||||    
T  22386928 ttagaagaggttgaatccaataaacagctatttgaaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttatgatgaacttgc 22387027  T
Q  176 ttctgatgaa-tttgcttttgatgac 200  Q
    |||||||||| ||||||| |||||||    
T  22387028 ttctgatgaactttgcttctgatgac 22387053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 23284640 - 23284831
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttg 109  Q
    |||||| |||||||||  ||||||| |||||||| |||||||  |||||||   |||||| |||   ||||||||| || ||||| || |||| | ||||    
T  23284640 aagcattcaatgccttcaaatcctttcaaaataggcgttgcttcacttttctggtcttctgcaatgcttagacgagattaaatccattgaacaacatttg 23284739  T
Q  110 aagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||||||  ||||  |||||||||||| || ||||| | ||||||| |||||||||  |  ||||||| ||||| |||||| |||||||    
T  23284740 aagctttaagtcttgcatctcctgatgaacttcagcttctagcgatcttctgcttctgat-gagatgcttctaatgaacttgcttctgatgac 23284831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 19688832 - 19688980
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||||||||||  ||||||| |||||||||| |||||  ||| ||||| | ||||||||   || ||||||  | ||||| || |    
T  19688832 tttgaagaacaaacatccaatgccttcaaatcctttcaaaatagtccttgcttcactcttccagttttctacaatgcttggacgagaataaatccattga 19688931  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctg 148  Q
    ||| | ||||||||||||||| |||  |||||||||||| || ||||||    
T  19688932 acaacctttgaagctttaagtcgcatctcctgatgaacttcagcttctg 19688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 20112779 - 20112596
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| ||||||||||||||||  | | ||||  |||||| |||   ||||| ||| || ||||| || ||||     
T  20112779 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcattcttccggtcttctgcaatgcttagaagagattaaatccattgaacaa 20112680  T
Q  104 c-ttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | |||| |||||||||||  ||||  || ||||||||| || |||| ||||||||| |||||||||  ||||||||||||||||    
T  20112679 cctttttaagctttaagtcttgcatctcttgatgaacttcagcttcaggtgatctttagcttctgaagaacttgcttctgatga 20112596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 26589789 - 26589873
Alignment:
Q  130 tgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    ||||||||| || |||||||||||    |||||| ||| ||||||||||||||||  |||||| |||||| ||||||||||||||    
T  26589789 tgatgaactgcagcttctggtgatacatagcttcagatgaacttgcttctgatgaccttgcttctgatgaacttgcttctgatga 26589873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 14100519 - 14100373
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||| ||  ||| ||||| ||||||||||   ||||| ||| || ||||| || ||||     
T  14100519 aagaagaagcatccaatgccttcaaatcctttcaaaatagttgtttcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacat 14100420  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctg 148  Q
    | |||||| |||||||  |||||  |||||||||||| || ||||||    
T  14100419 cctttgaaactttaagtcttgcatctcctgatgaacttcagcttctg 14100373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 19624125 - 19624203
Alignment:
Q  80 gacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    |||||| |||||||| || |||| | ||||||||||||||  |||||  |||||||||||| || ||||||||||||||    
T  19624125 gacgagattgaatccattgaacaacctttgaagctttaagacttgcatctcctgatgaacttcagcttctggtgatctt 19624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 17381610 - 17381680
Alignment:
Q  130 tgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||||| ||  |||||||||| ||  |||| |||||||||||||| ||||||| |||||| |||||||    
T  17381610 tgatgaactgcaggttctggtgatttttggcttttgataaacttgcttttgatgaacttgcttctgatgac 17381680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 12423434 - 12423471
Alignment:
Q  147 tggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||| || ||||||||||||||||||||||||||    
T  12423434 tggtgatcctcggcttctgataaacttgcttctgatga 12423471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 34451663 - 34451568
Alignment:
Q  88 tgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||| || |||||| |||||| ||||||||  ||||  ||||||||||||| | ||||||||||   ||| ||||| || ||||||||||||||||    
T  34451663 tgaatccattgaacagcctttgaatctttaagtcttgcatctcctgatgaactagagcttctggtga---tcaacttctaatgaacttgcttctgatga 34451568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 24116974 - 24117053
Alignment:
Q  80 gacgagtttgaatccgttaaacagc-ttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatctt 156  Q
    |||||| |||||||| || |||||| ||||||||||||||||  ||||  | |||||||||| || ||||||||||||||    
T  24116974 gacgagattgaatccattgaacagccttttgaagctttaagtcttgcatcttctgatgaacttcatcttctggtgatctt 24117053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 14955492 - 14955706
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||| ||| ||||||||| |||||| ||| |||||| |||||| ||| |||||||||||||||||||| ||||    
T  14955492 tttgaagaataagcatccaatgccttcaaatactttcaaaatagttgttgctttacctttccagtcttctgcaatctttagacgagtttgaatccattaa 14955591  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||||||||||||||||| |||| ||  |||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| |||||| ||||||    
T  14955592 acagcttttgaagctttgagttacatctcctgatgaactgcaacttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatga 14955691  T
Q  200 ccttgcttctgatga 214  Q
    |||||||||||||||    
T  14955692 ccttgcttctgatga 14955706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 2785130 - 2785344
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||| ||||||||||||| ||  ||||||| ||||||||| ||||||  ||||||||| |||||| ||| |||||||||||||||||||||||||    
T  2785130 tttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaa 2785229  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||| ||||||    
T  2785230 acaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctaataaacttgcttctgatgaacttgcttctgatga 2785329  T
Q  200 ccttgcttctgatga 214  Q
    ||||||||| |||||    
T  2785330 ccttgcttcagatga 2785344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 24775628 - 24775412
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||| |||||||||  ||||||| ||||||||| ||||||  ||||||||| |||||| ||| |||||||||||||||||||||||||    
T  24775628 tttgaagaataagcattcaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaa 24775529  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaact--acaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    |||||||||||||||||||||||||  ||||||||||||   || |||||||||||  ||||||| ||||||||||| |||||||||| | |||| ||||    
T  24775528 acagcttttgaagctttaagttgcatctcctgatgaactgcgcagcttctggtgattctcagcttgtgataaacttggttctgatgaactggcttctgat 24775429  T
Q  198 gaccttgcttctgatga 214  Q
    || ||||||||||||||    
T  24775428 gaacttgcttctgatga 24775412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 21640932 - 21641130
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||| |||||||||||||||| ||  |||||||||||||||| |||||||||||||||||| ||||||||||  |||| ||||||||||||| | |||    
T  21640932 tttgaaaaataagcatccaatgcttttcaatccttccaaaatagccgttgctatacttttccagtcttctacaatcttaggcgagtttgaatccttgaaa 21641031  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||| |||||||||||||  |||||||||||| ||||||||||||||   ||||||||||| ||||||||| || |||| |||||| ||||||    
T  21641032 cagcttttgaggctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttatgctgaacttgcttctgatga 21641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 5213641 - 5213789
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||| |||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||    
T  5213641 tttgaataataagcatctaatgccttcaaatccttccaaaatagttgttgctatacttttccagtcttctgcaatctttatacgagtttgaatccgttaa 5213740  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctg 148  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  5213741 acagcttttgaagctttaagttgcatctcctgatgaactacagcttctg 5213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 20627515 - 20627358
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttg 109  Q
    ||||||||||||||||  ||||| | ||||||||| ||||||  ||||||||| |||||| ||| | |||||||||||||||||| ||||||| ||||||    
T  20627515 aagcatccaatgccttcaaatccattcaaaatagttgttgcttcacttttccagtcttctgcaatcattagacgagtttgaatccattaaacatcttttg 20627416  T
Q  110 aagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||||||||||||||  |||||||||||| |||||||||||||| |||||||||||||    
T  20627415 aagctttaagttgcatctcctgatgaactgcaacttctggtgattttcagcttctgat 20627358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 49666480 - 49666309
Alignment:
Q  29 aatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttc 128  Q
    ||||||| |||||||||||||| |||||||||||| |||||| |||  |||||||||||||||||| | ||||| |||||||||||||||||||||  ||    
T  49666480 aatcctttcaaaatagtcgttgttatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaacaacttttgaagctttaagttgcatctc 49666381  T
Q  129 ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||||| || |||||||||||   || ||| |||| || |||||||||||||| |||||| |||||||    
T  49666380 ctgatgaactgcagcttctggtgattcacaacttatgatgaaattgcttctgatgaacttgcttctgatgac 49666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 53056821 - 53056636
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| ||||||||||  |||||||| ||||    
T  53056821 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgatgttgaatccattaa 53056722  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaa 185  Q
    |||||||||||| | ||||||||||   | ||||||||| || ||||| ||||| ||  |||||||||||||||| || |||||||    
T  53056721 acagcttttgaaaccttaagttgcatcccatgatgaactgcagcttctagtgatttttggcttctgataaacttgtttttgatgaa 53056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 33583295 - 33583510
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||| ||||||||||||| ||  ||||||| |||||||| |||||||  ||||||||| |||||||||| | |||||| || ||||||||  |||    
T  33583295 tttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagccgttgcttcacttttccagtcttctacaatccttagacaaggttgaatcccataa 33583394  T
Q  100 a-cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    | || |||||||||| ||||||||||    ||||||||||||||||| ||||||| || ||||||||||| |||||||||||||||| | |||| ||| |    
T  33583395 aacaacttttgaagccttaagttgcatcctctgatgaactacaacttttggtgatttttagcttctgatagacttgcttctgatgaactcgcttctgacg 33583494  T
Q  199 accttgcttctgatga 214  Q
    | |||| |||||||||    
T  33583495 aacttgtttctgatga 33583510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 46349936 - 46349738
Alignment:
Q  3 tgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaac 101  Q
    ||||||| ||||||||||||||||  ||||||| |||| |||||||||||  ||||||||| |||||| |||   ||||||||| ||| |||  || |||    
T  46349936 tgaagaacaagcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattggatcaattgaac 46349837  T
Q  102 agcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | |||||||||  |||||||||   |||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||| | |||| |||||||    
T  46349836 aacttttgaagtcttaagttgcttctcctgatgaactgcaacttctggtgattttcagcttctaatgaacttgcttctgatgaactcgcttctgatgac 46349738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 21636737 - 21636573
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    ||||||||||||||| ||||||||||| |||||| ||| || ||| |||||| || ||| | |||||||||||||||||||||||| ||  |||||||||    
T  21636737 caaaatagtcgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacagcttttgaagctttaagttccaactcctgatga 21636638  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||| | ||||||||||||   ||||||||||| ||||||||||||||||  |||||| |||||||    
T  21636637 actgccacttctggtgatacacagcttctgatgaacttgcttctgatgaccttgcttctgatgac 21636573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 46796439 - 46796287
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| |||| ||| |||||  ||||||||||| |||||| |||  |||||||||||||||||| ||||||| |||||||||||||||||||||  |||||    
T  46796439 cctttcaaattagccgttgtaatacttttccagtcttctgcaatcttagacgagtttgaatcctttaaacaacttttgaagctttaagttgcatctcctg 46796340  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||| || ||||| |||||   ||||||||||| ||||||||||||||||    
T  46796339 atgaactgcagcttcttgtgattcacagcttctgatgaacttgcttctgatga 46796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 28582171 - 28582373
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||||||||||| |  ||||||| ||||||||||||||||  ||| |||||||||||| |||    |||||||| || ||||| || |    
T  28582171 tttgaagaacaagcatccaatgccattaaatcctttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcatagacgagattaaatccattga 28582270  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||||| |||||||||||||||  ||||  |||||||||| || | ||||||||||| |||||||||| ||  |||||||||||||||| |||||| ||||    
T  28582271 acagcctttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttcagcttctaatgtacttgcttctgatgaacttgcttctgat 28582370  T
Q  198 gac 200  Q
    |||    
T  28582371 gac 28582373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 11223628 - 11223812
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||||||||  |||||| || |||||| |||    |||||||| ||||| || || |    
T  11223628 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttttcagtcttctgcaatgcatagacgagattgaacccattga 11223727  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||  |||||| |  |||||||||||| |  ||||||||||| ||||| ||||||| ||||||||||||||||    
T  11223728 acagcttttgaagctcaaagttgtatctcctgatgaactgctgcttctggtgattttcagattctgatgaacttgcttctgatga 11223812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 11869133 - 11869317
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||| |||||||  ||||||||| ||||||  |  | ||||||||| |||||| | ||||    
T  11869133 tttgaagaacaagcatccaatgccttcaaatcctttcaaactagacgttgcttcacttttccagtcttctgtatttcttagacgagattgaattcattaa 11869232  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||  ||||||||| ||||||||||   ||||||||||| || ||||||||||| ||||||||||||| || |||||||||||||    
T  11869233 acaaattttgaagccttaagttgcatcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatga 11869317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 14969392 - 14969578
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||| |||||| |||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  14969392 tttgaagaataagcatccaatgccatcaaatcctttcaaaatagttgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattga 14969491  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | ||||||||||||||  |||||  |||| |||||||| | |||||||||||||||||| |||||| ||||||||| ||||||    
T  14969492 acaacctttgaagctttaagtcttgcatatcctcatgaactagagcttctggtgatcttcagcatctgatgaacttgcttatgatga 14969578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 30054288 - 30054136
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| |||| |||||||||||||||||||| | |||||| ||| ||||| ||||||||||| | | ||||||||||||||||||| | |||||  |||||    
T  30054288 cctttcaaagtagtcgttgctatacttttcaagtcttctgcaattttaggcgagtttgaattcttgaaacagcttttgaagctttgaattgcatctcctg 30054189  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||  |  ||||||||||   ||||||||||| ||||||||||||||||    
T  30054188 atgaactgaagtttctggtgattcacagcttctgatgaacttgcttctgatga 30054136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 47207771 - 47207939
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa--ctttagacgagtttgaatccgtta 98  Q
    ||||||||| ||||||||||||||||  |||| || |||| ||| |||||||  ||||||||| |||||| |||  ||||||||||| || ||||| ||     
T  47207771 tttgaagaacaagcatccaatgccttcaaatcatttcaaactagccgttgcttcacttttccagtcttctgcaatgctttagacgagattaaatccattg 47207870  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||| | ||||||| |||| ||||||  |||||||||||| || ||||||||||| |||||||||||||    
T  47207871 aacaacctttgaagttttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgat 47207939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 21605721 - 21605557
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    ||||||||||||||  ||||||||||| |||||| ||| || ||| |||||| || ||| | ||||| |||||||||||||||||| ||  |||||||||    
T  21605721 caaaatagtcgttgtcatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaagctttaagttccatctcctgatga 21605622  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||| ||||||||||||||   || |||||||| ||||||||| ||||||  |||||| |||||||    
T  21605621 actgcaacttctggtgatacacaacttctgatgaacttgcttatgatgaccttgcttctgatgac 21605557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 2561253 - 2561439
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||||||||  |||  ||||||| ||||||||| ||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  2561253 tttgaagaacaagcatccaatttcttcaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattga 2561352  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | |||||||||||||||  ||||  ||||||||||||| | |||||||||||  |||||||||||| ||||||||||||||||    
T  2561353 acaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgattctcagcttctgatgaacttgcttctgatga 2561439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 49642852 - 49642690
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| || |||||||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||  || ||||     
T  49642852 aagaacaatcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaa 49642753  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttct 164  Q
    | |||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||    
T  49642752 cctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttct 49642690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 18121716 - 18121515
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaacttt-agacgagtttgaatccgttaa 99  Q
    ||||||||| |||||| |||||||||  ||||||| ||||||||| ||||||  ||| ||||| |||||| |||   | | ||||| |||||||| || |    
T  18121716 tttgaagaaaaagcattcaatgcctttaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattga 18121617  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||| | ||||||||||||| |  ||||  ||||||||||||| | |||||||||||||| ||||| |||| ||||||||| ||||||| |||||| ||||    
T  18121616 acaacctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatctttagcttatgatgaacttgcttttgatgaacttgcttctgat 18121517  T
Q  198 ga 199  Q
    ||    
T  18121516 ga 18121515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29855474 - 29855675
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaa-tcttctacaa-ctttagacgagtttgaatccgtta 98  Q
    ||||||||| ||||||||||||||||  ||| ||| |||| ||| |||||||  ||||||   | |||||| ||| ||||||||||| |||||||| |||    
T  29855474 tttgaagaacaagcatccaatgccttcaaattctttcaaactagccgttgcttcactttttttagtcttctgcaatctttagacgaggttgaatccatta 29855573  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||||||||||||||  ||||||||||   | ||||||||| ||  || ||||||| ||  ||||| ||||||||||||||||||||| | |||| |||||    
T  29855574 aacagcttttgaagtcttaagttgcatcccatgatgaactgcaggttttggtgatttttggcttccgataaacttgcttctgatgaactcgcttctgatg 29855673  T
Q  199 ac 200  Q
    ||    
T  29855674 ac 29855675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 40851060 - 40851208
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    ||||||||||||||| ||||||||||| |||||| ||| || ||| |||||| || ||| | || ||||||||||||||||||||| ||  |||||||||    
T  40851060 caaaatagtcgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaccagcttttgaagctttaagttccatctcctgatga 40851159  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||  | |||||||||||   || |||||||| ||||||||||||||||    
T  40851160 actgtagcttctggtgatacacaacttctgatgaacttgcttctgatga 40851208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 214
Target Start/End: Original strand, 33598014 - 33598130
Alignment:
Q  98 aaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||||| |||||||||| ||||||||||    ||||||||||||||||| ||||||| || ||||||||||| |||||||||||||||| | |||| |||     
T  33598014 aaacaacttttgaagccttaagttgcatcctctgatgaactacaacttttggtgatttttagcttctgatagacttgcttctgatgaactcgcttctgac 33598113  T
Q  198 gaccttgcttctgatga 214  Q
    || |||| |||||||||    
T  33598114 gaacttgtttctgatga 33598130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 47405515 - 47405348
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||| ||||||||  ||||||| |||| |||| ||||||  | ||||||| |||||| |||   ||||||||| || ||||| || |    
T  47405515 tttgaagaacaaacatcaaatgccttcaaatcctttcaaactagttgttgcttcatttttccagtcttctgcaatgcttagacgagattaaatccattga 47405416  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||| |||||||||||| ||||||  || ||||||||| || ||||||||||| |||||||||||||    
T  47405415 acagcctttgaagctttatgttgcatctcgtgatgaactgcagcttctggtgattttcagcttctgat 47405348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 20646223 - 20646421
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| |||||||| |||||||  ||| |||   ||||||||||   || |||||| |  ||| | || |||||    
T  20646223 aagaacaagcatccaatgctttcaaatcctttcaaaatagacgttgcttcactcttctggtcttctacaatgcttggacgagatgaaatacattgaacag 20646322  T
Q  104 c-ttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | |||| |||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||| |||||| |||||||    
T  20646323 ccttttaaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 20646421  T

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Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 13948405 - 13948602
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||  || ||||     
T  13948405 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacat 13948504  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||| ||||||||  |||||  ||||||||| ||  | |||||||||||||||||||||||||  |  |||||||||| || |||||| |||||||    
T  13948505 cctttgacgctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgat-gagatgcttctgataaacttgcttctgatgac 13948602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 40799939 - 40800106
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||| ||||||| ||||  ||| ||| |||| |||||||||||   |||||||| |||||| |||   ||||||||| || ||||| || |    
T  40799939 tttgaagaacaagtatccaattccttcaaatactttcaaactagtcgttgcttcgcttttccagtcttctgcaatgcttagacgagattaaatccattga 40800038  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||| |||||||||||| | ||||  || ||||||||| || ||||||||||| |||||||||||||    
T  40800039 acagcctttgaagctttatgatgcatctcttgatgaactgcagcttctggtgattttcagcttctgat 40800106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22140829 - 22140967
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||  ||  || || | |||||||||||||| |  |||| || | |||||| ||| | |||| |||||||||||||||| |    
T  22140829 tttgaagaacaagcatccaatgttttcaaaacccttcaaaatagtcgttggttcacttatctagtcttctgcaatccttaggcgagtttgaatccgttga 22140928  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaact 138  Q
    |||||||||||| ||||||||||||  ||||||||||||    
T  22140929 acagcttttgaaactttaagttgcatctcctgatgaact 22140967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 12963072 - 12962995
Alignment:
Q  107 ttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||||||||  ||||  ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  12963072 ttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatctt--gcttctgatgaacttgcttctgatga 12962995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 15903274 - 15903465
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttg 109  Q
    |||||| |||||| ||  ||||||| ||||||||||||||||  ||| ||| | ||||||  ||   ||||||||| |||||||| || |||||| ||||    
T  15903274 aagcatgcaatgctttcaaatcctttcaaaatagtcgttgcttcactcttctagtcttctgtaatgcttagacgagattgaatccattgaacagcgtttg 15903373  T
Q  110 aagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||||||  |||||  ||||||| || |||| ||| |||||||||||||||||||||  |  || |||||||||| |||||| |||||||    
T  15903374 aagctttaagtcttgcatctcctgataaattacagcttttggtgatcttcagcttctgat-gagatggttctgatgaacttgcttctgatgac 15903465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 37467402 - 37467556
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| ||||| ||||||||||   ||||| ||| || ||||| || ||||     
T  37467402 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacaa 37467501  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
      ||||||| ||||||  |||||  ||||||||||||||  ||||||||||||||    
T  37467502 gctttgaagatttaagttttgcatctcctgatgaactactgcttctggtgatctt 37467556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 41495068 - 41495179
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||  |||||||||| || ||||| || |||||    
T  41495068 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgtttagacgagattaaatccattgaacag 41495167  T
Q  104 cttttgaagctt 115  Q
    | ||||||||||    
T  41495168 cctttgaagctt 41495179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 50300373 - 50300467
Alignment:
Q  106 tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||| ||||||||||    |||||||||| || ||||||||||| || | ||| |||||||||||||||||||||| |||||| |||||||    
T  50300373 tttgaagccttaagttgcatcctctgatgaactgcagcttctggtgatttttaacttatgataaacttgcttctgatgaacttgcttctgatgac 50300467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 52920547 - 52920671
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttg 174  Q
    ||||||||| || ||||| || | |||| |||||| ||||||||  ||||  |||||||||||| || |||||||||||||||||||||||||  |  ||    
T  52920547 ttagacgagattaaatccattgagcagcctttgaaactttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgat-gagatg 52920645  T
Q  175 cttctgatgaatttgcttttgatgac 200  Q
    ||||||||||| |||||| |||||||    
T  52920646 cttctgatgaacttgcttctgatgac 52920671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 16658583 - 16658543
Alignment:
Q  127 tcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16658583 tcctgatgaactacaacttctggtgatcttcagcttctgat 16658543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 12726320 - 12726166
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    |||| |||||||||||||| ||  ||||||| ||||||||||||| ||  ||| ||| | |||||| |||   ||||||||| |||||||| || || ||    
T  12726320 aagagtaagcatccaatgctttcaaatcctttcaaaatagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatag 12726221  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||||||||||||||  ||| |  |||||||||||| |||||||| ||||||||    
T  12726220 cctttgaagctttaagtcttgaatctcctgatgaacttcaacttcttgtgatctt 12726166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 12752646 - 12752539
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt 173  Q
    |||||||||||||||||||| ||||||| || |||||| ||||| ||||||  | |||||||| ||||  |||||||| | | |||||||||||| ||||    
T  12752646 ctttagacgagtttgaatccattaaacaactatttgaaactttaggttgcatcttctgatgaattacagtttctggtgttatacagcttctgatagactt 12752547  T
Q  174 gcttctga 181  Q
    ||| ||||    
T  12752546 gctactga 12752539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 29951528 - 29951339
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||||||  |||  ||   ||||||||||   ||||||||| || ||||| || || |     
T  29951528 aagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaa 29951429  T
Q  104 cttttgaagctttaagttgcacttc--ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgctt 192  Q
    | |||||||||||||||  | | ||  |||||||||| || ||||| ||||||||||||||||||| ||  ||||||||||||| ||||||    
T  29951428 cctttgaagctttaagtctctcgtcttctgatgaacttcagcttctagtgatcttcagcttctgat-aaggtgcttctgatgaacttgctt 29951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 30000682 - 30000493
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||||||  |||  ||   ||||||||||   ||||||||| || ||||| || || |     
T  30000682 aagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaa 30000583  T
Q  104 cttttgaagctttaagttgcacttc--ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgctt 192  Q
    | |||||||||||||||  | | ||  |||||||||| || ||||| ||||||||||||||||||| ||  ||||||||||||| ||||||    
T  30000582 cctttgaagctttaagtctctcgtcttctgatgaacttcagcttctagtgatcttcagcttctgat-aaggtgcttctgatgaacttgctt 30000493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 1728037 - 1727919
Alignment:
Q  82 cgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctga 181  Q
    |||| |||||||| | ||||| |||||||| || ||||||  |  |||||||||||| || |||||||||||   ||||||||||| ||||||||| |||    
T  1728037 cgagattgaatccttgaaacaacttttgaaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttttga 1727938  T
Q  182 tgaatttgcttttgatgac 200  Q
    |||| | |||| |||||||    
T  1727937 tgaactagcttctgatgac 1727919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 37412726 - 37412871
Alignment:
Q  67 ttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctga 166  Q
    |||| |||||| || |||| |||||||| | |||||||||||||| |||||  |||  |||| |||| | || || ||| |||||| ||  |||||||||    
T  37412726 ttctgcaacttcaggcgagcttgaatccttgaaacagcttttgaaactttagattgatcttc-tgataatctgcagcttttggtgaact--agcttctga 37412822  T
Q  167 taaacttgcttctgatgaatttgcttttgatga-ccttgcttctgatga 214  Q
    ||||||||||||||||||| |||||| ||| || | |||||||||||||    
T  37412823 taaacttgcttctgatgaacttgcttctgacgagctttgcttctgatga 37412871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 51341143 - 51341283
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagcttt-tgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt 173  Q
    ||||||||||| |||||||| ||||||| || | |||| ||||| ||||||  | |||||||||||||  |||| ||||| | ||||||||||| || |     
T  51341143 ctttagacgaggttgaatccattaaacaactatatgaaactttaggttgcatcttctgatgaactacagtttctagtgatatacagcttctgatgaaata 51341242  T
Q  174 gcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||||||||  | |||||| |||| | ||||||||| ||||    
T  51341243 gcttctgatagacttgcttctgataaacttgcttctaatga 51341283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 38177733 - 38177568
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctaca-actttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||||||  ||| |||||||||||| ||    | ||||||| || ||| | || ||||     
T  38177733 aagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttccaatcttctgcattgctcagacgagattaaattcattgaacaa 38177634  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | ||||||||||||||  |||||  |||| || ||||| | |||||| |||||||| |||||||||    
T  38177633 cctttgaagctttaagtcttgcatctcctaataaactagagcttctgatgatcttctgcttctgat 38177568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 49553581 - 49553425
Alignment:
Q  3 tgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaac 101  Q
    ||||||| || |||||||||||||  ||||||| ||||||||||  ||||  ||| || ||||||||| |||   ||||||||  || ||||  ||||||    
T  49553581 tgaagaacaaacatccaatgccttcaaatcctttcaaaatagtcactgcttcactctttcaatcttctgcaatgcttagacgatgttaaatctattaaac 49553482  T
Q  102 agcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    ||| |||||| |||||||  |||||  |||||||||||| |  ||||||||||||||    
T  49553481 agcctttgaaactttaagtcttgcatctcctgatgaacttcggcttctggtgatctt 49553425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13824134 - 13824254
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctaca-actttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||||||||||  |||| || ||||||||| ||||||  ||| ||||| |||||| ||   |||||||||| || ||||| || |    
T  13824134 tttgaagaacaaacatccaatgccttcaaatcatttcaaaatagttgttgcttcactcttccagtcttcttcattgtttagacgagattaaatccattga 13824233  T
Q  100 acagcttttgaagctttaagt 120  Q
    ||| | |||||||||||||||    
T  13824234 acaacctttgaagctttaagt 13824254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 45858760 - 45858660
Alignment:
Q  82 cgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctg 180  Q
    ||||||| ||||| |||||||||| |||||| ||||| ||||||  | |||||||||||||  |||||||||| | | |||||||||| | ||||| |||    
T  45858760 cgagtttaaatccattaaacagctatttgaaactttaggttgcatcttctgatgaactacagtttctggtgatatactgcttctgatagaattgctactg 45858661  T
Q  181 a 181  Q
    |    
T  45858660 a 45858660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 512493 - 512540
Alignment:
Q  133 tgaactacaacttctggtgatcttcagcttctgataaacttgcttctg 180  Q
    |||||| || |||||||||||||||||||| |||| ||||||||||||    
T  512493 tgaacttcagcttctggtgatcttcagcttatgatgaacttgcttctg 512540  T

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Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 6090801 - 6090998
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| |||||| |||||||||  ||||||| |||| |||  ||||||  ||| ||| | |||||| |||   ||||||||| || ||||| || | ||     
T  6090801 aagaacaagcattcaatgccttcaaatcctttcaaattagatgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcaa 6090900  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||| |||||||  ||||  |||||||||||| || ||||||||||||||| |||||||||  |  ||||| ||||||| |||||| |||||||    
T  6090901 cctttgaagttttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgat-gagatgcttttgatgaacttgcttctgatgac 6090998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 16658708 - 16658661
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgct 52  Q
    ||||||||||||||||||| ||  ||||||| ||||||||||||||||    
T  16658708 aagaataagcatccaatgctttcaaatcctttcaaaatagtcgttgct 16658661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 41495179 - 41495240
Alignment:
Q  138 tacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||||||||||||||||| |||||||  |  ||||||||||||| |||||| |||||||    
T  41495179 tacaacttctggtgatcttcagtttctgat-gagatgcttctgatgaacttgcttctgatgac 41495240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 11909042 - 11908977
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaacta 139  Q
    |||||||||||||||||||| ||||||| || |||||| ||||| ||||||  | |||||||||||    
T  11909042 ctttagacgagtttgaatccattaaacaactatttgaaactttaggttgcatcttctgatgaacta 11908977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 13780668 - 13780627
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgct 52  Q
    ||||||||||||||||  ||||||| ||||||||||||||||    
T  13780668 aagcatccaatgccttcaaatcctttcaaaatagtcgttgct 13780627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 16032594 - 16032639
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttg 50  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||    
T  16032594 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttg 16032639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 19888959 - 19888854
Alignment:
Q  80 gacgagtttgaatccgttaaacag-cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgct 176  Q
    |||||| |||||||| || ||||| ||||| |||||||||||  ||||  || |||||||||  | ||||| ||||||||  ||||||||| ||||||||    
T  19888959 gacgagattgaatccattgaacagtctttttaagctttaagtcttgcatctcttgatgaactttagcttctagtgatctt--gcttctgatgaacttgct 19888862  T
Q  177 tctgatga 184  Q
    ||||||||    
T  19888861 tctgatga 19888854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 1727960 - 1727920
Alignment:
Q  174 gcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||||||||||| ||||||||||||| || |||||||||||    
T  1727960 gcttctgatgaacttgcttttgatgaactagcttctgatga 1727920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 31303596 - 31303651
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||||||||||||||||||  |  ||||||||||||| |||||| ||||||    
T  31303596 cttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 31303651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 6e-67; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 33074286 - 33074486
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||| ||||||||  ||||  ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||||    
T  33074286 tttgaagaataagcatctaatgccttccaatctgtccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaa 33074385  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||||| ||||||    
T  33074386 acagcttttgaagttttaagttgcatctcctgatgaactacaacttctagtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatga 33074485  T
Q  200 c 200  Q
    |    
T  33074486 c 33074486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 34321976 - 34321762
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||| ||||    
T  34321976 tttgaagaataagaatccaatgcctttcaatcctttcaaaatagtcgttgctatacttttccaggcttctgcaatctttagacgagtttgaatcctttaa 34321877  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||||||||||| |||||||||||||  |||||||||| |||| ||||| |||||  |||||||||||||||||||||||||||||| |||||| ||||||    
T  34321876 acagcttttgaggctttaagttgcatctcctgatgaattacagcttctagtgattctcagcttctgataaacttgcttctgatgaacttgcttatgatga 34321777  T
Q  200 ccttgcttctgatga 214  Q
     || |||||||||||    
T  34321776 tctcgcttctgatga 34321762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 35744040 - 35743842
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||  ||||| || |||||    
T  35744040 tttgaagaattagcattcaatgccttcaaatccttccaaaatagtcgttgctatacttttccaatattctgcaatctttagacg--tttgagtctgttaa 35743943  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| ||||||| |||||||||||||  ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||| ||||||    
T  35743942 acaacttttgacgctttaagttgcatctcctgatgaactacagcttctggtgattttcagcttccgataaacttgcttctgatgaacttgcttctgatga 35743843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 31328006 - 31327791
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||| ||  || || ||||||||||||||||||  |||| || | |||||| ||| |||||| |||||||||||||||| |    
T  31328006 tttgaagaacaagcatccaatgctttcaaaaccctccaaaatagtcgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttga 31327907  T
Q  100 acagctttt-gaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||| ||||| ||| ||||||||||||  |||||||||||| || |||||||||||   ||||||||||||||||||||||||||||| | |||| |||||    
T  31327906 acaactttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatgaactagcttatgatg 31327807  T
Q  199 accttgcttctgatga 214  Q
    | ||||||| ||||||    
T  31327806 aacttgcttatgatga 31327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 31334727 - 31334512
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||| ||  || || ||||||||||||||||||  |||| || | |||||| ||| |||||| |||||||||||||||| |    
T  31334727 tttgaagaacaagcatccaatgctttcaaaaccctccaaaatagtcgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttga 31334628  T
Q  100 acagctttt-gaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||| ||||| ||| ||||||||||||  |||||||||||| || |||||||||||   ||||||||||||||||||||||||||||| | |||| |||||    
T  31334627 acaactttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatgaactagcttatgatg 31334528  T
Q  199 accttgcttctgatga 214  Q
    | ||||||| ||||||    
T  31334527 aacttgcttatgatga 31334512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 6392694 - 6392879
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatc-cgtta 98  Q
    ||||| ||| ||||||||||||| ||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| | ||||||||| ||||||| | |||    
T  6392694 tttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcacatta 6392793  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||||||||| ||||| ||||    |||||||||| |||||| ||||||| || |||||||||||||||||||||||||||    
T  6392794 aacagcttttgaagccttaagatgcatcctctgatgaactgcaacttatggtgatttttagcttctgataaacttgcttctgatga 6392879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 214
Target Start/End: Complemental strand, 45087219 - 45087008
Alignment:
Q  6 agaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-ttaaacag 103  Q
    |||||||||||| ||||| ||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| | ||||||||| ||||||||  |||||||     
T  45087219 agaataagcatctaatgcattcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccattaaacaa 45087120  T
Q  104 ctttt-gaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgacct 202  Q
    ||||| ||||||||||||||||    ||||||||||  | ||||| ||||| || |||||||||||||||||||||| ||||| |||||| || ||||||    
T  45087119 ctttttgaagctttaagttgcatcctctgatgaactgtagcttctagtgatatttagcttctgataaacttgcttcttatgaacttgcttctggtgacct 45087020  T
Q  203 tgcttctgatga 214  Q
    || |||||||||    
T  45087019 tgtttctgatga 45087008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28711738 - 28711553
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||| | | | |||||||||||||| |||||||||| |||||| ||| |||||||| || |||||||| ||||    
T  28711738 tttgaagaacaagcatccaatgccttcaaattcattcgaaatagtcgttgctttacttttccagtcttctgcaatctttagacaaggttgaatccattaa 28711639  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtga-tcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||| ||||||||||   | | ||||||| || |||||||||| | ||  ||||||||||||||||||||||||||    
T  28711638 acagcttttgaagccttaagttgcatcccattatgaactgcagcttctggtgattttttggcttctgataaacttgcttctgatga 28711553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 199
Target Start/End: Complemental strand, 22785673 - 22785506
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| |||||||||||||||||||| |||||| | |||| ||| ||||| ||||||||||  | | ||| |||||||||||||||||||||||  |||||    
T  22785673 cctttcaaaatagtcgttgctatacatttccagttttctgcaattttaggcgagtttgaaatcttgaaatagcttttgaagctttaagttgcatctcctg 22785574  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||  | |||||||||||   ||||||||||| ||||||||| ||||||| |||||| ||||||    
T  22785573 atgaactgtagcttctggtgattcacagcttctgatgaacttgcttttgatgaacttgcttctgatga 22785506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 6574163 - 6573978
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa--ctttagacgagtttgaatccgtta 98  Q
    ||||||||| || |||||||||||||  ||||||| |||| |||||||||||  ||||||||| |||||| |||  | ||||||||| || ||||  ||     
T  6574163 tttgaagaacaaacatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcattagacgagattaaatcaattg 6574064  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||| | |||||||||||| ||||||  | |||||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||    
T  6574063 aacaacctttgaagctttatgttgcatcttctgatgaactgcaacttctagtgattttcagcttctgatgaacttgcttctgatga 6573978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 28701269 - 28701083
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||   |||||| |||||||||| |||||| ||| ||| ||||||| |||||||  ||||    
T  28701269 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatatctgttgctttacttttccagtcttctgcaatcttaagacgaggttgaatctattaa 28701170  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtga-tcttcagcttctgataaacttgcttctgatgaa 185  Q
    |||||||||||||| ||||||||||   | ||||||||| || |||||||||| | ||  |||||||||||||||| ||||||||||    
T  28701169 acagcttttgaagccttaagttgcatcccatgatgaactgcagcttctggtgattttttggcttctgataaacttgtttctgatgaa 28701083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 28550936 - 28550784
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| ||||||||| ||| ||||||||||||| |||||| ||| ||||| ||||||||||||| | ||||||||||||| | ||||| |||||  |||||    
T  28550936 cctttcaaaatagttgtttctatacttttccagtcttctgcaattttaggcgagtttgaatccttgaaacagcttttgaggttttaaattgcatctcctg 28550837  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||| || |||||||||||   ||||||||||| ||||||||| ||||||    
T  28550836 atgaactgcagcttctggtgattcacagcttctgatgaacttgcttatgatga 28550784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 23235071 - 23235268
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||||||||||||||||||||  ||| ||| |||||||||||||||| |||| ||||| |||||| |||   ||||||||| || ||||| || |||||    
T  23235071 aagaataagcatccaatgccttcaaattctttcaaaatagtcgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacag 23235170  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||||||||||  |||||  || |||||||||| | ||||||||||| |||||||||||||  |  ||||||||||||| |||||| |||||||    
T  23235171 cctttgaagctttaagtcttgcatctcatgatgaactagagcttctggtgattttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 23235268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 30557360 - 30557145
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-tta 98  Q
    ||||| ||| ||||||||||||  ||  ||| ||| ||||||||||| ||||  |||||| || || ||| ||| | ||||||||| ||||||||  |||    
T  30557360 tttgaggaacaagcatccaatgtgttcaaattctttcaaaatagtcgatgcttcactttttcagtcctctgcaatccttagacgaggttgaatcccatta 30557261  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||||  ||||||||| ||||||||||    |||||||||| || ||||||||||| || |||||||||| ||||||||||||||||| | ||||||||||    
T  30557260 aacaatttttgaagccttaagttgcatcctctgatgaactgcagcttctggtgatatttagcttctgatgaacttgcttctgatgaactcgcttttgatg 30557161  T
Q  199 accttgcttctgatga 214  Q
    | ||||||||||||||    
T  30557160 aacttgcttctgatga 30557145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 22802520 - 22802717
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||||  |||||||  ||||||| |||||||| | ||||| ||| |||| | |||||| ||| |||||||||||||||||||| ||||    
T  22802520 tttgaagaataagcatcatatgccttcaaatcctttcaaaatagccattgctttacctttctagtcttctgcaatctttagacgagtttgaatccattaa 22802619  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    | |||||||||| ||||||||||||  ||||||||||                 || ||| |||||||||||||||||||||||||||| ||| ||||||    
T  22802620 atagcttttgaatctttaagttgcatctcctgatgaa-----------------ctgcaggttctgataaacttgcttctgatgaattttcttctgatga 22802702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 1587051 - 1586898
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    |||| |||||||| |||||  |||||||| || |||||| ||| ||| ||| |||||||||||| ||||||| |||||||||||||||||| ||  ||||    
T  1587051 cctttcaaaatagccgttgtaatactttttcagtcttctgcaatcttcagatgagtttgaatcctttaaacaacttttgaagctttaagttccatctcct 1586952  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||| || |||||||||||  |||||||||||| |||||| |||||||||    
T  1586951 gatgaactccagcttctggtgattctcagcttctgatgaacttgtttctgatga 1586898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20152075 - 20151890
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||  |||||||  ||||||||| |||||| |||   ||||||||| || ||||| || |    
T  20152075 tttgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattga 20151976  T
Q  100 acagcttttgaagctttaa-gttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| ||||||||||||||| ||||||  ||||||||| || || ||||||||||| ||||||||||||| |||||| |||||||||    
T  20151975 acaacttttgaagctttaatgttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatgaacttgtttctgatga 20151890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 31968056 - 31967909
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaa 136  Q
    ||||||||| ||||||||||||||||| |||||| ||| ||||  ||||||||||||| | ||||| ||||||| |||||||||||||  | ||||||||    
T  31968056 caaaatagttgttgctatacttttccagtcttctgcaattttatgcgagtttgaatccttgaaacaacttttgaggctttaagttgcatcttctgatgaa 31967957  T
Q  137 ctacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    || || |||||||||||   || ||||| || ||||||||||||||||    
T  31967956 ctgcagcttctggtgattcacaacttcttatgaacttgcttctgatga 31967909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 22188138 - 22187941
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||  | ||||||||| ||||||  ||| || || |||||| |||   ||||||||| || ||||| || |||||    
T  22188138 aagaacaagcatccaatgccttcaaatctattcaaaatagttgttgcttcactctttcagtcttctgcaatacttagacgagattaaatccattgaacag 22188039  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | |||||||||||||||  ||||  |||||||||||| ||||||||||||||||||||||||||||  |  ||||||||||||| |||||| |||||||    
T  22188038 cctttgaagctttaagtcttgcatgtcctgatgaacttcaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 22187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 3277112 - 3277265
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    ||||||||| ||| ||||| ||||||||| || |||||| ||| ||| |||| ||||||||| | ||||||| |||||||||||||||||| ||  ||||    
T  3277112 ccttccaaattagccgttgttatactttttcagtcttctgcaatcttcagacaagtttgaattctttaaacaacttttgaagctttaagttccatctcct 3277211  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
     ||||||| || ||||| |||||   ||||||||||| ||||||||||| ||||    
T  3277212 aatgaactccagcttctagtgattcccagcttctgatgaacttgcttctaatga 3277265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 40332169 - 40332322
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa-cagcttttgaagctttaagttgcacttcct 130  Q
    |||| |||||||| |||||||||||||||||| |||||| ||| ||||| |||||||||||||   ||| |||||||  |||||||  ||| ||  ||||    
T  40332169 cctttcaaaatagccgttgctatacttttccagtcttctgcaattttaggcgagtttgaatcctagaaagcagctttgaaagctttgggttacatctcct 40332268  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||| || |||||||||||   ||||||||||| ||||||||| ||||||    
T  40332269 gatgaactgcagcttctggtgattcacagcttctgatgaacttgcttatgatga 40332322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 44840516 - 44840665
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| ||||||||||||||| |||||||| || ||| || |||  |||| ||||||||||||| | |||||||||||||||||||||||||||  || ||    
T  44840516 cctttcaaaatagtcgttgccatactttttcagtct-ctgcaatgttaggcgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcttg 44840614  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||| || |||||| |||  ||  ||||||||| | ||||||||||||||    
T  44840615 atgaactgcagcttctgatgaattt--gcttctgatgatcttgcttctgatga 44840665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 22776306 - 22776190
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| |||||||| |||||||||||||||| | |||| | ||| ||||| ||||| |||| || | ||||| |||||||||||||||||||||  |||||    
T  22776306 cctttcaaaatagccgttgctatacttttcaagtcttttgcaattttaggcgagtctgaaaccttgaaacaacttttgaagctttaagttgcatctcctg 22776207  T
Q  132 atgaactacaacttctg 148  Q
    |||||||||| ||||||    
T  22776206 atgaactacagcttctg 22776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 22781684 - 22781568
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| |||||||| |||||||||||||||| | |||| | ||| ||||| ||||| |||| || | ||||| |||||||||||||||||||||  |||||    
T  22781684 cctttcaaaatagccgttgctatacttttcaagtcttttgcaattttaggcgagtctgaaaccttgaaacaacttttgaagctttaagttgcatctcctg 22781585  T
Q  132 atgaactacaacttctg 148  Q
    |||||||||| ||||||    
T  22781584 atgaactacagcttctg 22781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 25037212 - 25037098
Alignment:
Q  87 ttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||| || |||| | |||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||    
T  25037212 ttgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatga 25037114  T
Q  185 atttgcttttgatgac 200  Q
    | |||||| |||||||    
T  25037113 acttgcttctgatgac 25037098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 25041319 - 25041205
Alignment:
Q  87 ttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||| || |||| | |||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||    
T  25041319 ttgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatga 25041221  T
Q  185 atttgcttttgatgac 200  Q
    | |||||| |||||||    
T  25041220 acttgcttctgatgac 25041205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 31800927 - 31800743
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaa 99  Q
    ||||||||  || |||||||||| ||  ||||||| ||||||||| |||| |  ||||||||| |||||| |||    |||||||||||| ||||  |||    
T  31800927 tttgaagatcaaacatccaatgctttcaaatcctttcaaaatagttgttgtttcacttttccagtcttctgcaataaatagacgagtttggatccactaa 31800828  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
     ||||||||||||||||||||||||   | ||||||||| ||  ||||||||||  |  ||||||||||||||||||||||||||    
T  31800827 gcagcttttgaagctttaagttgcatcccatgatgaactgcagtttctggtgattatttgcttctgataaacttgcttctgatga 31800743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 30667059 - 30667250
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttg 109  Q
    ||||||||||||||||  ||||||| ||||||||||||||||  | | ||||| |||||| |||   ||||||||| || ||||| || |||| | ||||    
T  30667059 aagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcattcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttg 30667158  T
Q  110 aagctttaa--gttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||||   |||||  |||||||||||||||||||||| |  |||||||||||||||  |  ||||||||| ||| |||||| |||||||    
T  30667159 aagctttaattcttgcatctcctgatgaactacaacttctgatattcttcagcttctgat-gagatgcttctgacgaacttgcttctgatgac 30667250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 13964014 - 13963832
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||| ||| ||||||||||||||||  ||| || || ||||||||||   ||||||||| || ||||| || ||||     
T  13964014 aagaacaagcatccaatgccttcaaattctttcaaaatagtcgttgcttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacaa 13963915  T
Q  104 cttttgaagctttaa--gttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | |||||||||||||   |||||  | ||||||||||| | ||||| |||||||| | |||||||  ||||||||||||||||    
T  13963914 cctttgaagctttaaatcttgcatctactgatgaactagagcttctagtgatctttaacttctgaggaacttgcttctgatga 13963832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 18376942 - 18376760
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| |||| |  ||| ||  |||||||| |||   ||||||||| || ||||| || |||||    
T  18376942 aagaacaagcatccaatgccttcaaatcctttcaaaatagtagttgattcactattaaaatcttctgcaatgcttagacgagattaaatccattgaacag 18376843  T
Q  104 cttttgaagctttaagttgcacttcctga--tgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | |||||||||||||||  | | || | |  |||||| |||||||||||||||||| ||||||||| ||||| ||||||||||    
T  18376842 cctttgaagctttaagtctctcatcttcaaatgaacttcaacttctggtgatcttctgcttctgatgaacttacttctgatga 18376760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22317653 - 22317856
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaa-tagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgtta 98  Q
    ||||||||| ||||||||||||||||  ||||||| ||||| |||||||||||  ||| ||| | |||| | |||   ||||| ||| || |||||  |     
T  22317653 tttgaagaacaagcatccaatgcctttaaatcctttcaaaaatagtcgttgcttcactcttctagtcttatgcaatgcttagatgagattaaatccaatg 22317752  T
Q  99 aacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttga 196  Q
    || ||| |||||||||||||||  ||||  || ||||||| || | ||||||||||| |||||||||||||  |||||||| ||||||| |||||| |||    
T  22317753 aaaagcctttgaagctttaagtcttgcatctcttgatgaaatagagcttctggtgattttcagcttctgatgtacttgcttatgatgaacttgcttatga 22317852  T
Q  197 tgac 200  Q
    ||||    
T  22317853 tgac 22317856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 38781459 - 38781658
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaac-tttagacgagtttgaatccgttaa 99  Q
    ||||||||| || ||| |||||||||  ||||||| ||||||||| ||||||  ||||||||| |||||||||   |||||||||| || ||||  || |    
T  38781459 tttgaagaacaatcattcaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctacattgtttagacgagattaaatcaattga 38781558  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||| | ||||||||||||||  |||||    |||||||   ||| |||||||||||||||||||||||||  |  ||||||||||||| |||||| ||||    
T  38781559 acaacctttgaagctttaagtcttgcatcctctgatga--gacatcttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgat 38781655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 20568786 - 20568632
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||||| || ||||||  ||| ||||| |||||| |||   ||||||||| || ||||| |  |||||    
T  20568786 aagaacaagcatccaatgccttcaaatcctttcaaaattgttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatggaacag 20568687  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||| |||||||||||  ||||  ||||||||||||||| ||||||||||||||    
T  20568686 cctttaaagctttaagtcttgcatctcctgatgaactacagcttctggtgatctt 20568632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 25829198 - 25829352
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || ||||     
T  25829198 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacat 25829297  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||||||||| ||||  |||||  ||||||||||||  | ||||||||||||||    
T  25829298 cctttgaagctctaagtcttgcatctcctgatgaactttagcttctggtgatctt 25829352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 1084142 - 1084235
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||||||||||||||||||| |||||||||| ||||||  |||| ||||||  | |||||||||||||  |||||||||| | |||||||||||    
T  1084142 ctttagacgagtttgaatcctttaaacagctatttgaaagtttaggttgcatcttctgatgaactacagtttctggtgatatacagcttctgat 1084235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 22260470 - 22260625
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||| | ||||  ||||||||||||||| | ||||||  ||||||||| |||||| |||   ||||||||| || ||||| || ||||     
T  22260470 aagaacaagcatccagttccttcaaatccttccaaaatatttgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaa 22260569  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttc 157  Q
    ||||||| ||||||||  |||||  ||||||||| ||  |||||||||||||||||    
T  22260570 cttttgacgctttaagtcttgcatctcctgatgagctttaacttctggtgatcttc 22260625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 24377265 - 24377347
Alignment:
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||||  ||||  || ||||||||| || |||||||||||||| |||||||||| ||||| ||||||||||    
T  24377265 cttttgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatctttagcttctgatgaactttcttctgatga 24377347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 24576111 - 24576309
Alignment:
Q  17 ccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgag-tttgaatccgttaaacagcttttgaagct 114  Q
    ||||||||||  ||||||| ||||||||| ||||||  ||||||||| |||||| |||   ||||| ||| ||| ||||| || |||| | |||||||||    
T  24576111 ccaatgcctttaaatcctttcaaaatagttgttgcttcacttttccagtcttctgcaatgcttagatgagatttaaatccattgaacaacctttgaagct 24576210  T
Q  115 ttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgat 212  Q
    ||||||  ||||  |||| |||||||  | ||||||||||||||  |||| |||| |  | |||||||||||| | |||| |||||||||||||||||||    
T  24576211 ttaagtattgcatctcctaatgaactttagcttctggtgatctt--gcttatgatgatat-gcttctgatgaactagcttctgatgaccttgcttctgat 24576307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 30621289 - 30621445
Alignment:
Q  14 catccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttgaag 112  Q
    |||||||||||||  ||||||| ||||||||||| ||||  ||| ||||| |||||| |||   ||| ||||| || ||||| || |||| | ||||||     
T  30621289 catccaatgccttcaaatcctttcaaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaac 30621388  T
Q  113 ctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||||| |  ||||  |||||||| |||||||||||| ||||| |||||||||||||    
T  30621389 ctttaattcttgcatctcctgatgcactacaacttctagtgatattcagcttctgat 30621445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 30623910 - 30624066
Alignment:
Q  14 catccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttgaag 112  Q
    |||||||||||||  ||||||| ||||||||||| ||||  ||| ||||| |||||| |||   ||| ||||| || ||||| || |||| | ||||||     
T  30623910 catccaatgccttcaaatcctttcaaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaac 30624009  T
Q  113 ctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||||| |  ||||  |||||||| |||||||||||| ||||| |||||||||||||    
T  30624010 ctttaattcttgcatctcctgatgcactacaacttctagtgatattcagcttctgat 30624066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 9015406 - 9015210
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||||||||||||||||| ||  ||||||| ||||||||| |||| |  ||| ||||| |||||| |||   |||||| || || ||||| || ||||     
T  9015406 aagaataagcatccaatgctttcaaatcctttcaaaatagttgttgtttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaa 9015307  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||||||||||  |||||  ||||||||||||  |  |||||| ||||||| |||||||||  | ||| |||||||||| |||||| |||||||    
T  9015306 cctttgaagctttaagtcttgcatctcctgatgaactttagtttctgg-gatcttctgcttctgat-gagttgtttctgatgaacttgcttctgatgac 9015210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 39037539 - 39037496
Alignment:
Q  141 aacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||| |||||||||||||||||||| ||||||||||||||||    
T  39037539 aacttccggtgatcttcagcttctgatgaacttgcttctgatga 39037496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 14581597 - 14581671
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagctt 106  Q
    |||| ||||||||||||||| ||| ||||||| |||||| ||| ||||| ||||||| ||||| | |||||||||    
T  14581597 cctttcaaaatagtcgttgccatatttttccagtcttctgcaattttaggcgagttttaatccttgaaacagctt 14581671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 10009709 - 10009590
Alignment:
Q  80 gacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgctt 177  Q
    |||||| |||||||| || ||||||  ||||||||||||||  ||||  |||||||||||| || ||||||||||||||   ||||||||  |  |||||    
T  10009709 gacgagattgaatccattgaacagcccttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--tcttctgat-gagatgctt 10009613  T
Q  178 ctgatgaatttgcttttgatgac 200  Q
    |||||||| |||||| |||||||    
T  10009612 ctgatgaacttgcttctgatgac 10009590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 44840625 - 44840665
Alignment:
Q  174 gcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  44840625 gcttctgatgaatttgcttctgatgatcttgcttctgatga 44840665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 23392681 - 23392517
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| ||||||||||| ||||||  || || ||| |||||| || ||| | ||||| |||||||| |||| ||||  | || |||||||    
T  23392681 caaaatagccgttgccatacttttccagtcttctgtaatttctaggcgagttagagtccttgaaacaacttttgaaactttgagttcaatttactgatga 23392582  T
Q  136 actacaacttctggtgatcttcagcttctgataaac-ttgcttctgatgaa-tttgcttttgatgac 200  Q
    |||  | |||||| ||| |||  ||||||||| ||| |||||||||||||| ||||||| |||||||    
T  23392581 actgtagcttctgatgaactt--gcttctgatgaactttgcttctgatgaattttgcttctgatgac 23392517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 23184225 - 23184184
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||| |||||||||||||||| | ||||||||||||||||    
T  23184225 cttctgatgatcttcagcttctggtgaacttgcttctgatga 23184184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 23595482 - 23595441
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||| |||||||||||||||| | ||||||||||||||||    
T  23595482 cttctgatgatcttcagcttctggtgaacttgcttctgatga 23595441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 7609102 - 7609213
Alignment:
Q  80 gacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgctt 177  Q
    |||||| |||||||| || ||||||  |||||||||||||  |||||  ||||||||||||  | ||||||||||||||  |||||||||  |  |||||    
T  7609102 gacgagattgaatccattgaacagcccttgaagctttaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgat-gagatgctt 7609198  T
Q  178 ctgatgaatttgctt 192  Q
    |||||||| ||||||    
T  7609199 ctgatgaacttgctt 7609213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 126; Significance: 4e-65; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 22175 - 21962
Alignment:
Q  2 ttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaa 100  Q
    |||||||||||||||||||||||||  |||||||| || |||||||||||||||||| |||| |||||| ||| |||||||||||||| ||||| |||||    
T  22175 ttgaagaataagcatccaatgccttccaatccttcaaagatagtcgttgctatacttctccagtcttctgcaatctttagacgagttttaatcctttaaa 22076  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    || |||||||| ||||||||||||  | || ||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||| |||||||    
T  22075 caacttttgaacctttaagttgcatcttctaatgaactacaacttctggtgattcacagcttctgataaacttgcttctgatgaacttgcttctgatgac 21976  T
Q  201 cttgcttctgatga 214  Q
    ||||||||||||||    
T  21975 cttgcttctgatga 21962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 9626 - 9809
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||| ||||||||||||||||||| |  ||||||| ||||||||||||||||||||||| ||| |||||| |||  |||||| ||||||||||| | |||    
T  9626 tttgtagaataagcatccaatgcccttcaatcctttcaaaatagtcgttgctatactttcccagtcttctgcaatcttagacaagtttgaatccttgaaa 9725  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    || |||||||||||||||||||||  |||||||||||| || |||||||||||   |||||| |||| ||||||||||||||||    
T  9726 caacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttatgatgaacttgcttctgatga 9809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 19097 - 19283
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa--ctttagacgagtttgaatccgtta 98  Q
    ||||||||| ||||||| ||||||||  |||||||||||||||| |||||||  ||| ||||| |||||| |||  |||| |||||| || ||||| ||     
T  19097 tttgaagaacaagcatcaaatgcctttaaatccttccaaaatagccgttgcttcactcttccagtcttctgcaatgcttt-gacgagattaaatccattg 19195  T
Q  99 aacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||| ||| |||||||||||  || |   ||||||||| || | |||||||||||||||| |||||||||||||||||||||||||    
T  19196 aacagcctttcaagctttaagtcttgtatcacctgatgaaatagagcttctggtgatcttcaacttctgataaacttgcttctgatga 19283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 48570246 - 48570047
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | |||||| |||  ||||||||||||||||||||||||    
T  48570246 tttgaagaataagcatccaatgccttttaatccttccaaaatagtcgttgttatacttttctagtcttctgcaatcttagacgagtttgaatccgttaaa 48570147  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||||||| ||||||||||||  |||||||||| |||| |||||||||||  ||||||||||||||| |||||| ||||||| ||| || |||||||    
T  48570146 cagcttttgaaactttaagttgcatctcctgatgaattacagcttctggtgattctcagcttctgataaaattgcttatgatgaacttgtttctgatgac 48570047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 44821560 - 44821376
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||| ||| |||||  |||||||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||||| ||||    
T  44821560 tttgaagaataagcatacaaagccttcaaatccttccaaaatagtcgttgctatactttttcagtcttctacaaaccttagacgagtttgaatcctttaa 44821461  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||  ||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||    
T  44821460 acaacttttgaagctttaagttgcatctcctgatgaactacagcttatggtgattctcagcttctgataaacttgcttctgatga 44821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 25448581 - 25448365
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||| ||||  ||||||||| |||||| ||| |||||||||||||||||||||||||    
T  25448581 tttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgctgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaa 25448482  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaact--acaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    |||||||||||||||||||||||||  | ||||||||||   || ||||| |||||  |||||||||||||||||||||| ||||||| | |||| | ||    
T  25448481 acagcttttgaagctttaagttgcatcttctgatgaactgcgcagcttctagtgattctcagcttctgataaacttgcttttgatgaactggcttctaat 25448382  T
Q  198 gaccttgcttctgatga 214  Q
    || ||||||||||||||    
T  25448381 gaacttgcttctgatga 25448365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 2327454 - 2327240
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||| ||||||||||||| ||  ||||||| |||||||||  |||||  |||||| || || ||| ||| |||||||||||||||||||  ||||    
T  2327454 tttgaggaacaagcatccaatgcgttcgaatcctttcaaaatagtttttgcttcactttttcagtcatctgcaatctttagacgagtttgaatctattaa 2327355  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||||||||  |||||||||||| || ||||||||||| ||  ||||||||||||||||||||||||||| | |||||||||||    
T  2327354 acaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgatttttggcttctgataaacttgcttctgatgaactcgcttttgatga 2327255  T
Q  200 ccttgcttctgatga 214  Q
     ||||||||||||||    
T  2327254 acttgcttctgatga 2327240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 21702879 - 21703077
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||||||||||||| ||||||| |  ||||||| |||||||| |||||||||||||||| | |||||| |||  |||||||||||||||||| | |||    
T  21702879 tttgaagaataagcattcaatgcccttcaatcctttcaaaatagccgttgctatacttttcaagtcttctgcaatcttagacgagtttgaatccttgaaa 21702978  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||  ||||||||||||||||||||  |||||||||||| || |||||||||||   |||||||||||  |||||||||||||||| |||||| ||||||    
T  21702979 caaattttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgtacttgcttctgatgaacttgcttctgatga 21703077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 10251073 - 10251241
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    ||||||||| ||| ||||| |||||||||||| |||||| |||  |||||||||||||||||| ||||||| |||||||||||||||||||||  |||||    
T  10251073 ccttccaaattagccgttgttatacttttccagtcttctgcaatcttagacgagtttgaatcctttaaacaacttttgaagctttaagttgcatctcctg 10251172  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||| || |||||||||||    |||||||||| |||||||||  |||||| ||||||||||||||    
T  10251173 atgaactgcagcttctggtgattcatagcttctgatgaacttgctttcgatgaacttgcttttgatgac 10251241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 46089076 - 46089245
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaacttt-agacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||| ||| || ||||||||||||| | |||||||||||||||||||||||||||  || |    
T  46089076 cctttcaaaatagtcgttgccatacttttccagtcttctgcaatttttaggcgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcat 46089175  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||| || |||||||||||   || ||| |||| ||||||||||||||||| |||||| |||||||    
T  46089176 gatgaactgcagcttctggtgatacacaacttatgatgaacttgcttctgatgaacttgcttctgatgac 46089245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 30572266 - 30572414
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagc 104  Q
    |||||||| |||||||||| ||  ||||||| |||||||| |||||||||||||||||| |||||| |||  | |||||||||||||||| | |||||||    
T  30572266 aagaataaacatccaatgcttttcaatcctttcaaaatagccgttgctatacttttccagtcttctgcaatctcagacgagtttgaatccttgaaacagc 30572365  T
Q  105 ttttgaagctttaagttgcacttcctgatgaactacaacttctggtgat 153  Q
    | |||||||||||||||| |  |||||||||||| ||||||||||||||    
T  30572366 tattgaagctttaagttgtatctcctgatgaactgcaacttctggtgat 30572414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 35040231 - 35040415
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||  ||||||||||||| ||  ||||||| |||||||||||||||| |||||||| | |||||| ||| ||||||||||| ||| |||| ||||    
T  35040231 tttgaagatcaagcatccaatgctttcaaatcctttcaaaatagtcgttgctttacttttctagtcttctgcaatctttagacgaggttggatccattaa 35040330  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||| ||||||||||   | ||||||| | || ||||||||||| ||  ||||||||||||||||||||||||||    
T  35040331 acaacttttgaagccttaagttgcatcccatgatgaattgcagcttctggtgatttttggcttctgataaacttgcttctgatga 35040415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 2834755 - 2834938
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||| |||||||  |||||| || ||||| ||||   ||||||||| |||||||| || |    
T  2834755 tttgaagaacaagcatccaatgccttcaaatcctttcaaattagccgttgcttcactttttcagtcttcaacaatgcttagacgagattgaatccattga 2834854  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||| ||||||||||||||||  ||| |||||||| || ||||||||||| |||||||||| ||  |||||||||||||||    
T  2834855 acaactttggaagctttaagttgcatctcccgatgaactgcagcttctggtgattttcagcttctaat-gacttgcttctgatga 2834938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 180
Target Start/End: Complemental strand, 22427368 - 22427192
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||| |||||||||||  ||||||||| |||||| |||   ||||||||| || ||||  || |||||    
T  22427368 aagaacaagcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatctattgaacag 22427269  T
Q  104 cttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctg 180  Q
      |||||||||||| ||||||  ||||||||||||  | ||||||||||| ||||||||||||| ||||||||||||    
T  22427268 tctttgaagctttatgttgcatctcctgatgaactggagcttctggtgattttcagcttctgatgaacttgcttctg 22427192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 28492415 - 28492233
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||||||  ||| ||| | |||||| |||   ||||||||  || ||||| || ||||     
T  28492415 aagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgatattaaatccattgaacaa 28492316  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | |||||||||||||||  ||||  ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  28492315 cctttgaagctttaagtcttgcatctcctgatgaactacaacttctgaagatcttcagcttctgatgaacttgcttctgatga 28492233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 29215862 - 29216029
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||| |||||||  ||||||| | |||| | |||   ||||||||| || ||||| ||||    
T  29215862 tttgaagaacaagcatccaatgccttcaaatcctttcaaactagccgttgcttcacttttctagtcttttgcaatgcttagacgagattaaatccattaa 29215961  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||| | |||||||||||||||||||  |||||||||| | |||||||||||||| |||||||||||||    
T  29215962 acaacctttgaagctttaagttgcatctcctgatgaattgcaacttctggtgattttcagcttctgat 29216029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 22600197 - 22600028
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||||||||| | |||| ||||| |||||| |||   |||||| || || ||||| || |    
T  22600197 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgttttactcttccagtcttctgcaatgcttagacaagattaaatccattga 22600098  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||| ||||||||||||||  |||||  ||||||||||||| | |||||||||||||| ||||||||||    
T  22600097 acagcctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgat 22600028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22464824 - 22464623
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  |||| || |||| |||||||||||  ||||||||| |||||| |||   ||||| ||| || |||||||| |    
T  22464824 tttgaagaacaagcatccaatgccttcaaatcatttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccgttga 22464725  T
Q  100 acagc-ttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||| | ||||||||||||| ||| ||  ||||||||||||  | | ||||||||| |||||||||| || |||||||||||| || | |||||| |||||    
T  22464724 acaaccttttgaagctttatgttacatctcctgatgaactgtagcatctggtgattttcagcttcttatgaacttgcttctggtggacttgcttctgatg 22464625  T
Q  199 ac 200  Q
    ||    
T  22464624 ac 22464623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 32785948 - 32785767
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||| |||||||||||  ||||||||| |||||| |||   ||||||||| || ||||| | || ||     
T  32785948 aagaacaagcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccatgaa-caa 32785850  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | |||||||||||||||  ||||  || |||||||||||||||||| ||||| |||||||||| || ||||||||||| ||||    
T  32785849 cctttgaagctttaagtcttgcatctcatgatgaactacaacttctagtgattttcagcttctaatgaacttgcttctaatga 32785767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 35401874 - 35402072
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctaca-actttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| ||||||  |   |||| ||||| || ||||| || |    
T  35401874 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtattgtttaaacgagattaaatccattga 35401973  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||||  ||||||||||||||  |||||  | |||||||   ||| |||||||||||||||||||||||||  |  ||||||||||||| |||||| ||||    
T  35401974 acagtctttgaagctttaagtcttgcatcttctgatga--gacagcttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgat 35402070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 1900410 - 1900579
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||| |||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  1900410 tttgaagaacaagcattcaatgcctttaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattga 1900509  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | | | ||||||||||||||  |||||  ||||||||||||| | ||||||| |||||| ||||||||||    
T  1900510 ataacctttgaagctttaagtcttgcatctcctgatgaactagatcttctggcgatctttagcttctgat 1900579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 39201007 - 39200823
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||||||||| |||  ||||||| |||| ||| |||||||  ||| || || |||||| |||   ||| | ||| || ||||| || |    
T  39201007 tttgaagaacaagcatccaatgtcttcaaatcctttcaaactagccgttgcttcactctttcagtcttctgcaatgcttacatgagattaaatccattga 39200908  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||||| ||||||  |||| ||||||| || ||| ||||||| |||||||| |||| ||||||||| ||||||    
T  39200907 acagcttttgaagctttatgttgcatctcctaatgaactgcagcttttggtgattttcagcttttgatgaacttgcttttgatga 39200823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16235311 - 16235127
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaac-tttagacgagtttgaatccgttaa 99  Q
    |||| |||| |||||| |||||||||  ||||||| ||||||||||||||||  ||||||||| |||||| ||   |||||||||| || ||||  || |    
T  16235311 tttggagaacaagcattcaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcattgtttagacgagattaaatcaattga 16235212  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | ||||||| ||||| |  ||||  |  ||||||   ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  16235211 acaacctttgaagttttaaatcttgcatcttatgatgag--acaacttctggtgatcttcagcttctgatgaacttacttctgatga 16235127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 20954484 - 20954319
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    |||||||||| |||||||| ||  ||||||| |||||| | | |||||  ||| ||||  |||||| |||   ||||||||| || ||||| || ||||     
T  20954484 aagaataagcctccaatgctttcaaatcctttcaaaatggccattgcttcactcttcctgtcttctgcaatgcttagacgagattaaatccattgaacaa 20954385  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | |||||||||||||||  ||||  ||||||||||||| | |||||||||||||||||||||||||    
T  20954384 cctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgat 20954319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 34255453 - 34255343
Alignment:
Q  87 ttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaat 186  Q
    |||||||| | |||||||||||||||||||| ||||  |||  |||| | || || |||||||||| |||  |||||||||||||||||||||||||||     
T  34255453 ttgaatccttgaaacagcttttgaagctttaggttgatctta-tgataatctgcagcttctggtgaactt--gcttctgataaacttgcttctgatgaac 34255357  T
Q  187 ttgcttttgatgac 200  Q
    |||||| |||||||    
T  34255356 ttgcttctgatgac 34255343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 33256362 - 33256170
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  |||||||  |||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || ||||     
T  33256362 aagaacaagcatccaatgccttcaaatccttttaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaa 33256263  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    | ||||||||||||||  |||||  ||||| ||||||  | ||||||||||||||  |||||||||  |  ||||||||||||| |||||| ||||    
T  33256262 cctttgaagctttaagtcttgcatctcctgttgaactttagcttctggtgatctt--gcttctgat-gagatgcttctgatgaacttgcttctgat 33256170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 33276534 - 33276342
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  |||||||  |||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || ||||     
T  33276534 aagaacaagcatccaatgccttcaaatccttttaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaa 33276435  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    | ||||||||||||||  |||||  ||||| ||||||  | ||||||||||||||  |||||||||  |  ||||||||||||| |||||| ||||    
T  33276434 cctttgaagctttaagtcttgcatctcctggtgaactttagcttctggtgatctt--gcttctgat-gagatgcttctgatgaacttgcttctgat 33276342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 42284739 - 42284867
Alignment:
Q  57 ttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatct 155  Q
    ||||||| |||||| ||| |||||| |||||| || ||| | ||||||||||||||  ||||||||  |  | |||||||||| || |||||||||||      
T  42284739 ttttccagtcttctgcaatctttaggcgagttagagtccttgaaacagcttttgaaaatttaagttcaatcttctgatgaactgcagcttctggtgatac 42284838  T
Q  156 tcagcttctgataaacttgcttctgatga 184  Q
     ||||||||||| ||||||||||||||||    
T  42284839 acagcttctgatgaacttgcttctgatga 42284867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 7745030 - 7744891
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttg 174  Q
    ||||||| |||||||||||| ||||||| |||||||| || || ||||||  | |||||||||| || ||||||||||| |   ||||||||| ||   |    
T  7745030 ctttagatgagtttgaatccattaaacaacttttgaaactgtaggttgcatcttctgatgaactgcagcttctggtgatatatggcttctgatgaaacag 7744931  T
Q  175 cttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    ||||| || || |||||| |||||| ||| ||||||||||    
T  7744930 cttctaataaacttgcttctgatgaacttacttctgatga 7744891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 23036542 - 23036344
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaac-tttagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||||||||| |||  ||||||| ||||||||| |||| |  ||||||  | |||||| ||   |||||||||| || ||||| || |    
T  23036542 tttgaagaacaagcatccaatgtcttcaaatcctttcaaaatagttgttgtttcacttttttagtcttctgcattatttagacgagattaaatccattga 23036443  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    | ||| |||||||||||||||  ||||  | |||||||   ||| |||||||||||||||||||||||||  |  ||||||||||||| |||||| ||||    
T  23036442 atagcctttgaagctttaagtcttgcatcttctgatgag--acagcttctggtgatcttcagcttctgat-gagatgcttctgatgaaattgcttctgat 23036346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2267154 - 2267292
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||||||||||  ||| ||| |||| |||| ||||||  ||||||||| |||||| |||   ||||||||| || ||||| || |    
T  2267154 tttgaagaacaaacatccaatgccttcaaattctttcaaactagttgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattga 2267253  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaact 138  Q
    ||| | |||||||||||| ||||||  ||||||||||||    
T  2267254 acaacctttgaagctttatgttgcatctcctgatgaact 2267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 21121049 - 21120903
Alignment:
Q  40 aatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaag-ctttaagttgcacttcctgatgaac 137  Q
    |||||||||||| ||| ||||||| |||||| | | || |||  ||||| || ||| | ||||||||||||||  ||||||||| ||  |||||||||||    
T  21121049 aatagtcgttgccatatttttccagtcttctgcgatttctaggtgagttagagtccttgaaacagcttttgaaaactttaagttccatctcctgatgaac 21120950  T
Q  138 tacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | || |||||||||||   ||||||||||| || |||||||||||||    
T  21120949 tgcagcttctggtgatacacagcttctgatgaatttgcttctgatga 21120903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 21204911 - 21204745
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaag-ctttaagttgcacttcctgatg 134  Q
    |||||||| |||||| ||||||||||| |||||| ||| || ||| |||||| || ||| | ||||| ||||| ||  ||||||||| ||  || |||||    
T  21204911 caaaatagccgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttttaaaaactttaagttccatctcttgatg 21204812  T
Q  135 aactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaa-tttgcttttgatgac 200  Q
    |||| || |||||||||||   || |||||||| ||||||||||||| ||| ||||||| |||||||    
T  21204811 aactgcagcttctggtgatacacaacttctgatgaacttgcttctgacgaactttgcttctgatgac 21204745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 26702063 - 26701958
Alignment:
Q  81 acgagtttgaatccgttaaacagcttttgaagctttaagttgcacttc--ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttc 178  Q
    ||||| |||||||| |  |||||| |||||||||||||||  | | ||  ||||||||||  | ||||||||||||||||| ||||||| ||||||||||    
T  26702063 acgagattgaatccatataacagcctttgaagctttaagtctcccatcttctgatgaactttagcttctggtgatcttcagtttctgatgaacttgcttc 26701964  T
Q  179 tgatga 184  Q
    ||||||    
T  26701963 tgatga 26701958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 38282631 - 38282800
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| |||||| |||||||||  ||||||| |||||||  |||||||  ||| ||||| |||||| | |   ||||||||| || ||||| || |    
T  38282631 tttgaagaacaagcattcaatgcctttaaatcctttcaaaatacccgttgcttcactcttccagtcttctgcgatgcttagacgagattaaatccattga 38282730  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||| | |||||||||||||||  ||||  ||||||||||||| | ||| |||||||||| ||| ||||||    
T  38282731 acaacctttgaagctttaagtcttgcatctcctgatgaactagagcttttggtgatctttagcatctgat 38282800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 214
Target Start/End: Original strand, 12284568 - 12284704
Alignment:
Q  80 gacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt--gc 175  Q
    |||||| |||||||| || |||| | ||||||||| |||||  ||||  | |||||||||| || ||||||||||||||  ||||||||| |||||  ||    
T  12284568 gacgagattgaatccattgaacaacctttgaagctctaagtcttgcatcttctgatgaacttcagcttctggtgatctt--gcttctgatgaacttcagc 12284665  T
Q  176 ttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    ||||| |||  |||||| |||||| ||||||||||||||    
T  12284666 ttctggtgatcttgcttctgatgaacttgcttctgatga 12284704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 17371221 - 17371290
Alignment:
Q  130 tgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||  | ||||||||||| | |||||||||||| |||||||||||||||| |||||| ||||||    
T  17371221 tgatgaactgtagcttctggtgatatgcagcttctgatagacttgcttctgatgaacttgcttctgatga 17371290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 22153926 - 22154081
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| || |||||||||| ||  ||||||| |||| |||| ||||||  ||| ||| | |||||| |||   ||||||||| || ||||| || |||||    
T  22153926 aagaacaatcatccaatgctttcaaatcctttcaaattagttgttgcttcactattctagtcttctgcaatgcttagacgagattaaatccattgaacag 22154025  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttc 157  Q
    | ||||||||||||||  |||||  |||||||||||| || |||||||||||||||    
T  22154026 cctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttc 22154081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 21135070 - 21134999
Alignment:
Q  113 ctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||| ||  |||||||||||| ||||||||||||||   || |||||||| ||||||||||||||||    
T  21135070 ctttaagttccatctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgcttctgatga 21134999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 7309971 - 7310052
Alignment:
Q  88 tgaatccgttaaacagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||||| || |||||||||||||||||||||  |||||  ||||||||| ||  | ||| |||||||||||||||||||||    
T  7309971 tgaatccattgaacagcttttgaagctttaagtcttgcatctcctgatgagctttagcttatggtgatcttcagcttctgat 7310052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 34255406 - 34255344
Alignment:
Q  152 atcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||| ||||||||| | |||||||||||||| || |||||| |||||| ||||||||||||||    
T  34255406 atctgcagcttctggtgaacttgcttctgataaacttgcttctgatgaacttgcttctgatga 34255344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 48704273 - 48704482
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||| ||||||  ||||||| ||||||||| |||| |  ||| ||||| |||||| ||    ||| ||||| || ||||| || ||||     
T  48704273 aagaacaagcatccagtgccttcaaatcctttcaaaatagttgttgtttcactcttccagtcttctgcattgcttaaacgagattaaatccattgaacaa 48704372  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgacc 201  Q
    | |||||||||||||||  ||||  | ||||||||||  | |||||||||||||  |||||||||| |  | |||||||||||| | |||| ||||||||    
T  48704373 cctttgaagctttaagtcttgcatcttctgatgaactttagcttctggtgatct--agcttctgatgagat-gcttctgatgaactagcttctgatgacc 48704469  T
Q  202 ttgcttctgatga 214  Q
    ||| |||||||||    
T  48704470 ttgtttctgatga 48704482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 19215792 - 19215849
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||| |||||| ||||||||| | || ||||||||||||||||||||| |||||||    
T  19215792 cttctgatgatctgcagcttctggtgaatttgcttctgatgaatttgcttctgatgac 19215849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 21029003 - 21029044
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  21029003 cttctggtgatcttcagcttctgatgaacttgcttttgatga 21029044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 22201746 - 22201682
Alignment:
Q  6 agaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttct 70  Q
    |||| ||||||||||||||||  ||||||| ||||||||| |||||| ||||||| || ||||||    
T  22201746 agaacaagcatccaatgccttcaaatcctttcaaaatagttgttgctttactttttcagtcttct 22201682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 37642402 - 37642477
Alignment:
Q  98 aaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt 173  Q
    |||||||||||||| |||| ||||  | ||||||||||||| || ||||||||||| |  |||||||||| |||||    
T  37642402 aaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtgatatatagcttctgatgaactt 37642477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 19170236 - 19170163
Alignment:
Q  129 ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaa--tttgcttttgatgac 200  Q
    ||||||||||  | ||||||||||| |  |||||||||| |||||||||||||||||  ||||||| |||||||    
T  19170236 ctgatgaactgtagcttctggtgatataaagcttctgatgaacttgcttctgatgaacttttgcttctgatgac 19170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 21984750 - 21984836
Alignment:
Q  98 aaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||| |||||||  ||||||||| |   ||||||||||||  | |||||||||||   ||||||||||| ||||||||||||||||    
T  21984750 aaacaacttttgacactttaagttccctctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgcttctgatga 21984836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 10757490 - 10757671
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| || |||||||||| ||  ||||||| ||||||||| ||||||  ||| |||  || |||| |||   ||||||||| || ||||| || ||||     
T  10757490 aagaacaatcatccaatgctttcaaatcctttcaaaatagttgttgcttcactcttctgattttctgcaatgcttagacgagattaaatccattgaacaa 10757589  T
Q  104 c-ttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | |||||||||||||||  |||||  |||||||||||| || ||| || |||||||  ||||||||| |||||||| |||||||    
T  10757590 ccttttgaagctttaagtcttgcatctcctgatgaacttcagcttttgatgatctt--gcttctgatgaacttgctcctgatga 10757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 12284648 - 12284705
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||| ||| |||||||||||| | | ||||||||||||||| |||||| |||||||    
T  12284648 cttctgatgaacttcagcttctggtgatcttgcttctgatgaacttgcttctgatgac 12284705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Complemental strand, 17024852 - 17024795
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||| |||||||||||||||| | |  |||||||||||||| |||||| |||||||    
T  17024852 cttctgatgatcttcagcttctggtgatgttgcttctgatgaacttgcttctgatgac 17024795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36134255 - 36134323
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttct 70  Q
    ||||||||| |||||||||||| |||  ||||||| ||||||||| ||||||  ||||||||| ||||||    
T  36134255 tttgaagaacaagcatccaatg-cttcaaatcctttcaaaatagttgttgctccacttttccagtcttct 36134323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 6785 - 6571
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  |||| || ||||||||||| ||||  ||||||||| |||||| ||| | |||||| ||||||||||||||||    
T  6785 tttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcggtgcttcacttttccagtcttctgcaatccttagacaagtttgaatccgttaa 6686  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||| | |||||||||||    
T  6685 acagcttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgaactagcttttgatga 6586  T
Q  200 ccttgcttctgatga 214  Q
     |||||| |||||||    
T  6585 acttgctcctgatga 6571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 9e-60; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 6517545 - 6517729
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||||  |||| ||  ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||||    
T  6517545 tttgaagaataagcatctcatgctttccaatccttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaa 6517644  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | | |||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  6517645 ataacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttctgatga 6517729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 10692911 - 10693095
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||| ||||||  ||||||||| |||||| ||| |||||||||||||||||||||||||    
T  10692911 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaa 10693010  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||  ||||||||||||||| |||||||||||  |||||||||||| ||||||||||||||||    
T  10693011 acaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgatgaacttgcttctgatga 10693095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 10906677 - 10906861
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||| ||||||  ||||||||| |||||| ||| |||||||||||||||||||||||||    
T  10906677 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaa 10906776  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||  ||||||||||||||| |||||||||||  |||||||||||| ||||||||||||||||    
T  10906777 acaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgatgaacttgcttctgatga 10906861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 17398703 - 17398551
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| ||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||| | ||||| |||||||||||||||||||||  |||||    
T  17398703 cctttcaaaatagtcgttgctatacttttccagtcttctgcaattttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctg 17398604  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||  || |||||||||||    |||||||||| ||||||||||||||||    
T  17398603 atgaaccgcagcttctggtgattcatagcttctgatgaacttgcttctgatga 17398551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 54679990 - 54680155
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||||||||||  ||||||| ||||||||| ||||||  ||||||||| |||||| ||| | ||||||||||||||  || ||||    
T  54679990 tttgaagaacaaacatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctgcaatcattagacgagtttga--ccattaa 54680087  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||||||||||||||||||||||||  |||||||||||| || ||||||||||| |||||||||||||    
T  54680088 acagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgat 54680155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 3483781 - 3483963
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| |||||| |||   ||||||||| || ||||| || |    
T  3483781 tttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattga 3483880  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctg 180  Q
    | || |||||||||||||||  |||||  || | |||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  3483881 atagtttttgaagctttaagtcttgcatctcttaatgaactataacttctggtgatcttcagcttctgatgaacttgcttctg 3483963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17247304 - 17247503
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| || ||| |||||||||  ||||||| |||| |||||||||||  ||||| |||||||||| |||   ||||||||| |||||||| || |    
T  17247304 tttgaagaacaaacattcaatgccttcaaatcctttcaaattagtcgttgcttcacttt-ccaatcttctgcaatgcttagacgagattgaatccattga 17247402  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||| |||||||||||||||| | ||  |||||||||||| || ||||||||||| ||||||||||||| ||||||||||||||||| | |||| ||||||    
T  17247403 acaacttttgaagctttaagattcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgaactcgcttctgatga 17247502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 29121434 - 29121633
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||| ||||||  ||||||| ||||||||||||||||  |||||| || |||||| ||| ||||||||||| |||||||| ||||||||    
T  29121434 aagaacaagcatccagtgccttcaaatcctttcaaaatagtcgttgcttcactttttcagtcttctgcaatctttagacgaggttgaatccattaaacag 29121533  T
Q  104 cttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgacctt 203  Q
    |||||||||| |||||||||           | ||||||||||||||||| || || ||||||||||||||||||||||||| | |||| |||||| |||    
T  29121534 cttttgaagccttaagttgc-----------atctacaacttctggtgatttttagattctgataaacttgcttctgatgaactcgcttctgatgaactt 29121622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 413062 - 413246
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| || ||| |||||||||  ||||||| |||| ||| |||||||  ||||||| | |||||| |||   ||||||||| |||||||| || |    
T  413062 tttgaagaacaaacattcaatgccttcaaatcctttcaaattagccgttgcttcacttttcgagtcttctgcaatgcttagacgagattgaatccattga 413161  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| ||||||||||||||||||| |  |||||||||||| || ||||||||||| ||||||||||||| ||||||||||||||||    
T  413162 acaacttttgaagctttaagttgaatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 413246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 3105470 - 3105323
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||||||||| |||||||| | ||  ||||||| |||||||| |||||  ||||||||||| |||||| |||  |||||||||||||||||| | |||    
T  3105470 tttgaagaataaccatccaatacttttcaatcctttcaaaatagccgttggaatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa 3105371  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctg 148  Q
    ||||||||||||||||||||||||  |||||||||||| || ||||||    
T  3105370 cagcttttgaagctttaagttgcatctcctgatgaactgcagcttctg 3105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 37435586 - 37435373
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| |||||||||||| |||   || |||||| || ||||| || |    
T  37435586 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcttggacgagattaaatccattga 37435487  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||| | ||||||||||||||  |||||  |||||||||||| || ||||||||||||||  || ||||||  |  ||||||||||||| |||||| ||||    
T  37435486 acaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcctctgat-gagatgcttctgatgaacttgcttctgat 37435390  T
Q  198 gaccttgcttctgatga 214  Q
    |||||||||||||||||    
T  37435389 gaccttgcttctgatga 37435373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 55731840 - 55732036
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||| ||||  ||||||| |||||||||||||| | ||| | |||| |||| | ||| | |||||||||||||||||| ||||    
T  55731840 tttgaagaataagcatccaat-ccttcaaatcctttcaaaatagtcgttgatttacctctccagtcttttgcaattgttagacgagtttgaatccattaa 55731938  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||| ||||||||| |||||||||||  |||||||||||| || |||| ||||||  ||||||||| | ||||||| |||||||||  |||||| |||||    
T  55731939 acaacttttgaagttttaagttgcatctcctgatgaactgcagcttccggtgattctcagcttct-aaaaacttgtttctgatgaccttgcttctgatg 55732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 8105698 - 8105913
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-tta 98  Q
    ||||| ||| ||||||||||||| ||  ||||||| |||||||| |||||||  | ||||||| |||||| ||| | ||||||||  ||||||||  |||    
T  8105698 tttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagccgttgcttcaattttccagtcttctgcaatccttagacgaagttgaatcccatta 8105797  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    |||| |||||||||| ||||||||||    || ||||||  |||||||||||||| || | |||||||||||||||||||||||||| |  ||| |||||    
T  8105798 aacaacttttgaagccttaagttgcatcctctaatgaacggcaacttctggtgatttttaacttctgataaacttgcttctgatgaactcacttctgatg 8105897  T
Q  199 accttgcttctgatga 214  Q
    | ||||||||||||||    
T  8105898 aacttgcttctgatga 8105913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 19884762 - 19884947
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||  ||||||||| |||||| |||   ||||||||| || ||||| | ||    
T  19884762 tttgaagaacaagcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccatgaa 19884861  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
     || | |||||||||||||||  ||||  ||||||||||||||| |||||||||||  |||||||||||| ||||||||||||||||    
T  19884862 -catcctttgaagctttaagtcttgcatctcctgatgaactacagcttctggtgattgtcagcttctgatgaacttgcttctgatga 19884947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 16940077 - 16940183
Alignment:
Q  2 ttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaac 101  Q
    ||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||| |||| |    
T  16940077 ttgaagaataagcattcaatgcctttcaatcctttcaaaatagtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccattaagc 16940176  T
Q  102 agctttt 108  Q
    |||||||    
T  16940177 agctttt 16940183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 3395661 - 3395868
Alignment:
Q  12 agcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttga 110  Q
    |||||||||||| ||  ||||||| ||||||||||||||||  |||||| || | |||| |||   ||||||||  || ||||| || |||| |||||||    
T  3395661 agcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactttttcagttttctgcaatgcttagacgatatttaatccattgaacaacttttga 3395760  T
Q  111 agctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaattt--gcttttgatgaccttgct 206  Q
    || |||||||  ||||  ||||||||||||| | ||||| |||||||||| |||||||||||||||||||||||||| ||  ||||||||| | ||||||    
T  3395761 agatttaagtcttgcatctcctgatgaactatagcttctagtgatcttcaacttctgataaacttgcttctgatgaacttcagcttttgataaacttgct 3395860  T
Q  207 tctgatga 214  Q
    ||||||||    
T  3395861 tctgatga 3395868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 14571161 - 14571268
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgct 176  Q
    |||| ||||||||||||| | ||||| |||||||||||||||||||||  |||||||||||| ||||||||||||||   ||||||||||| ||||||||    
T  14571161 ttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgct 14571260  T
Q  177 tctgatga 184  Q
    ||||||||    
T  14571261 tctgatga 14571268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 14833460 - 14833625
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| |||||||  || ||||     
T  14833460 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacat 14833559  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | |||||||||||||||  ||||  |||||||||| |||||||||||| |||||||||||||||||    
T  14833560 cctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgat 14833625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 13576165 - 13575998
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||| ||||||||  ||||||| |||| ||| |||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  13576165 tttgaagaacaagcatctaatgccttcaaatcctttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattga 13576066  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||  |||||||||||| ||||||  |||||||||||| || ||||||||||| |||||||||||||    
T  13576065 acaggctttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgat 13575998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 16853620 - 16853727
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgct 176  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||||  |  |||| ||||||||||| |||||||   ||||||||||||||||||||    
T  16853620 ttagacgagtttgaatctgttaaacaacttttgaaccttgaagttgcatcttttgatcaactacaacttatggtgattcacagcttctgataaacttgct 16853719  T
Q  177 tctgatga 184  Q
    ||||||||    
T  16853720 tctgatga 16853727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 14904403 - 14904246
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacag 103  Q
    |||||||||||||||||| |||  ||||||| |||||| | |||||||  ||||||||| |||||| |||    |||||||| || ||||| || || ||    
T  14904403 aagaataagcatccaatgtcttcaaatcctttcaaaatggacgttgcttcacttttccagtcttctgcaatgcctagacgagattaaatcctttgaatag 14904304  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcag 159  Q
    |||||||||||||| ||  ||||  |||||||||||||||||||||||||||||||||    
T  14904303 cttttgaagctttaggtcttgcatctcctgatgaactacaacttctggtgatcttcag 14904246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 25651155 - 25651046
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctac-aactttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||| |||||||||  |||||||||||||||| |||||||  ||||||| | |||||| | | |||||||| ||||||||||||||||    
T  25651155 tttgaagaataagcattcaatgccttcaaatccttccaaaatagccgttgcttcacttttcaagtcttctgcgatctttagacaagtttgaatccgttaa 25651056  T
Q  100 acagcttttg 109  Q
    ||| ||||||    
T  25651055 acaacttttg 25651046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 9140976 - 9141092
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||||||||||||||| |||||||||| ||||||||||   ||||||||| |||||||| || ||||     
T  9140976 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgctttacttttccagtcttctacaatgcttagacgagattgaatccattgaacaa 9141075  T
Q  104 cttttgaagctttaagt 120  Q
    |  ||||||||||||||    
T  9141076 cccttgaagctttaagt 9141092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 22675571 - 22675404
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||| ||||||||  ||||||| |||| |||||||||||  ||||||| | |||||| |||   ||||||||| || ||||| || |    
T  22675571 tttgaagaacaagcatcaaatgccttcaaatcctttcaaactagtcgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattga 22675472  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||| |||||||||||| ||||||  |||| ||||||| || ||||||| ||| ||  |||||||||    
T  22675471 acagcctttgaagctttatgttgcatctcctaatgaactgcagcttctggggattttttgcttctgat 22675404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 3499624 - 3499514
Alignment:
Q  87 ttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaat 186  Q
    |||||||| | ||||||||||||||||| || ||||  |||| |||||| || || |||||||||| |||  |||||||||||||||||||||||||||     
T  3499624 ttgaatccttgaaacagcttttgaagctctaggttgatcttc-tgatgatctgcagcttctggtgaactt--gcttctgataaacttgcttctgatgaac 3499528  T
Q  187 ttgcttttgatgac 200  Q
    |||||| |||||||    
T  3499527 ttgcttctgatgac 3499514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 56034634 - 56034816
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||||||||||  |||  || ||||||||||||||||  ||| ||||| |||||| |||   || |||||| || ||||| || |    
T  56034634 tttgaagaacaaacatccaatgccttcaaattatttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttggacgagattaaatccattga 56034733  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgat 182  Q
    ||||  ||||||||||||||  |||||  | |||||||||| || ||||||||||||||  ||||||||| ||||||||||||||    
T  56034734 acagtctttgaagctttaagtcttgcatcttctgatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgat 56034816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 15475167 - 15475018
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| ||||||||| | |||||| ||| |||||||||||||  ||||| | |||||||||||||| |||| ||||  | ||||||||||    
T  15475167 caaaatagccgttgccatacttttctactcttctgcaatctttagacgagttaaaatccttgaaacagcttttgaaactttgagttcaatttcctgatga 15475068  T
Q  136 actacaacttctggtgatcttcagcttctgataaac-ttgcttctgatga 184  Q
    |||  | |||||||||||   |||||| |||| ||| |||||||||||||    
T  15475067 actgtagcttctggtgatacacagcttttgatgaactttgcttctgatga 15475018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 22190933 - 22191082
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaag-ctttaagttgcacttcctgatg 134  Q
    ||||||||| ||||| ||||||||||| |||||| ||| || ||  | |||| || ||| | ||||||||||||||  ||||||||| ||| || |||||    
T  22190933 caaaatagttgttgccatacttttccagtcttctgcaatttctaagcaagttagagtccttgaaacagcttttgaaaactttaagttccacctcttgatg 22191032  T
Q  135 aactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||| || |||||||||||   ||||||||||| ||||||||||||||||    
T  22191033 aactgcagcttctggtgatacacagcttctgatgaacttgcttctgatga 22191082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 3793287 - 3793367
Alignment:
Q  104 cttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||||||||  |||||||||||| || ||||| ||||| ||||||||||| | ||||||||| ||||||    
T  3793287 cttttgaagctttaagttgcatctcctgatgaactgcagcttctagtgattttcagcttctggtgaacttgcttttgatga 3793367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 12811224 - 12811028
Alignment:
Q  6 agaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagc 104  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| || || |||||| |||   ||||||||   | ||||| || |||| |    
T  12811224 agaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgaaactaaatccattgaacaac 12811125  T
Q  105 ttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
     ||||||||||||||  |||||  |||| |||||||| | |||||||||||||||  || |||||  |  ||||||||||||| ||||||||||||||    
T  12811124 ctttgaagctttaagtcttgcatctcctaatgaactagagcttctggtgatcttctactactgat-gagatgcttctgatgaacttgcttttgatgac 12811028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 19911927 - 19911762
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||||||||||||||||| ||  ||||||| ||||||||||||||||  |||  ||   |||| | |||   || |||||| |||||||  || ||||     
T  19911927 aagaataagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactgctctggtcttttgcaatgcttggacgagattgaatctattgaacaa 19911828  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | ||| |||||||||||  ||||  |||||||||||||||||||||| ||||||||||||||||||    
T  19911827 cctttaaagctttaagtcttgcatctcctgatgaactacaacttctgatgatcttcagcttctgat 19911762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 29680591 - 29680426
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   |||||| || || ||||| || ||||     
T  29680591 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaa 29680492  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | |||| |||||||||  |||||  ||||| | ||||| | |||||||||||||||||||||||||    
T  29680491 cctttggagctttaagtcttgcatctcctggtaaactagagcttctggtgatcttcagcttctgat 29680426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 45833458 - 45833623
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||| ||| ||||||||  ||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || ||||     
T  45833458 aagaaaaagcatccaatgcattcaaatactttcaaaatagaagttgcttaactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaa 45833557  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | |||||||||||||||  ||||  ||||||||||||| | |||||||||||||| ||||||||||    
T  45833558 cctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgat 45833623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 3499586 - 3499515
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||||| |||||| ||||||||| | |||||||||||||| || |||||| |||||| ||||||||||||||    
T  3499586 cttctgatgatctgcagcttctggtgaacttgcttctgataaacttgcttctgatgaacttgcttctgatga 3499515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 200
Target Start/End: Complemental strand, 17700777 - 17700662
Alignment:
Q  82 cgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctga 181  Q
    |||| |||||||| | ||||| |||||||||||||| ||||  |||| |||||| || || |||||||||| |||  ||||||||| |||||||||||||    
T  17700777 cgagcttgaatccttgaaacaacttttgaagctttaggttgatcttc-tgatgatctgcagcttctggtgaactt--gcttctgatgaacttgcttctga 17700681  T
Q  182 tgaatttgcttttgatgac 200  Q
    | || |||||| |||||||    
T  17700680 taaacttgcttctgatgac 17700662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 17700734 - 17700663
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||||| |||||| ||||||||| | ||||||||||||||||| |||||| |||| | ||||||||||||||    
T  17700734 cttctgatgatctgcagcttctggtgaacttgcttctgatgaacttgcttctgataaacttgcttctgatga 17700663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 39419697 - 39419611
Alignment:
Q  98 aaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||| |||| ||||  | ||||||||||||| || |||||||||||   || |||||||| |||| |||||||||||    
T  39419697 aaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtgatacacaacttctgatgaactagcttctgatga 39419611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 200
Target Start/End: Original strand, 40860765 - 40860918
Alignment:
Q  48 ttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttc 146  Q
    |||| ||||||||||| |||||| ||| || ||| ||||||  | ||| | ||||| |||||||| ||||||||| ||  ||||||||||||  | ||||    
T  40860765 ttgccatacttttccagtcttctgcaatttctaggcgagttatagtccttgaaacaacttttgaaactttaagttccatctcctgatgaactgtagcttc 40860864  T
Q  147 tggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||   || |||||||| ||| ||||| ||||||| | |||| |||||||    
T  40860865 tggtgatacacaacttctgatgaacctgcttatgatgaactagcttctgatgac 40860918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 12601165 - 12601281
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||||||||||||| |  ||| ||| | |||||| |||   ||||||||| || ||||| || |||||    
T  12601165 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgattcactattcaagtcttctgcaatgcttagacgagattaaatccattgaacag 12601264  T
Q  104 cttttgaagctttaagt 120  Q
    | ||||| |||||||||    
T  12601265 cctttgacgctttaagt 12601281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 14153910 - 14153874
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttct 179  Q
    ||||||||||||||||||||||||| |||||||||||    
T  14153910 cttctggtgatcttcagcttctgatgaacttgcttct 14153874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 23123597 - 23123660
Alignment:
Q  106 tttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    |||||||||||||||  ||||  |||||||||||| || ||||||||||||||| |||||||||    
T  23123597 tttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgat 23123660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 14904241 - 14904190
Alignment:
Q  130 tgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctga 181  Q
    |||||| || ||||||||| ||| |||||||||||||| |||||||||||||    
T  14904241 tgatgatcttcaacttctgatgaccttcagcttctgatgaacttgcttctga 14904190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 37985659 - 37985594
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttct 70  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||||||  |||||| || ||||||    
T  37985659 aagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactttttcagtcttct 37985594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 7201 - 7001
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||| ||| ||| ||||| |||||||||| | ||    
T  7201 tttgaagaataagcatccaatgctttccaatccttccaaaatagtcgttgctatacttttccagtcttctgcaatcttcagacgggtttgaatccttcaa 7102  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||   ||||||||||| |||||||||||||| |  |||||| ||||||    
T  7101 acagcttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattcacagcttctgatgaacttgcttctgataacattgcttctgatga 7002  T
Q  200 c 200  Q
    |    
T  7001 c 7001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15704595 - 15704445
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||    
T  15704595 tttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttaa 15704496  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggt 150  Q
    |||||||||||||||||||||| ||  | ||||||||||||||||||||||    
T  15704495 acagcttttgaagctttaagtttcatcttctgatgaactacaacttctggt 15704445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 2265615 - 2265448
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||  ||| ||||  |||||||||||||||| ||||||||||||||| || |||||| ||| ||||||||||||||||||| |||||    
T  2265615 tttgaagaataagcattaaataccttcaaatccttccaaaatagccgttgctatactttttcagtcttctgcaatctttagacgagtttgaatctgttaa 2265516  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||    
T  2265515 acagcttttaaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgat 2265448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 35952784 - 35952585
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccg-tta 98  Q
    ||||| ||| || |||||||||||||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| | ||||||||| ||||||||  |||    
T  35952784 tttgatgaacaaacatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttcttcaatccttagacgaggttgaatcccatta 35952685  T
Q  99 aacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    ||||||||||||||| ||||||||||    |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||    
T  35952684 aacagcttttgaagccttaagttgcatcctctgatgaactgcaacttctggtgatttttagcttctgataaacttgcttctgatgaatttgcttctgatg 35952585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 4821536 - 4821735
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  |||| ||| ||||||| |||||||  ||||||| | ||||||  || ||||||||||||||||||  |||||    
T  4821536 tttgaagaacaagcatccaatgccttcaaatctttc-aaaatagccgttgctccacttttctagtcttctgtaatctttagacgagtttgaatttgttaa 4821634  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||||||||||||||||||||||| |  ||| |||||||| || ||||||||||| ||||||||||||  ||||||||||||||||  |||||||||||||    
T  4821635 acagcttttgaagctttaagttgtatctccggatgaactgcagcttctggtgattttcagcttctgacgaacttgcttctgatgaccttgcttttgatga 4821734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16543116 - 16542932
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  |||| || ||||||||||||||||  ||||||||| |||||| ||| | ||| |||||||||||||| ||||    
T  16543116 tttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccagtcttctgcaatcattaaacgagtttgaatccattaa 16543017  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||| ||| ||||||  |||||||||||| || ||| ||||||| ||||| ||||||| ||||| ||||||||||    
T  16543016 acagcttttgaagcattatgttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatgaactttcttctgatga 16542932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 16622546 - 16622730
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  |||| || ||||||||||||||||  ||||||||| |||||| ||| | ||| |||||||||||||| ||||    
T  16622546 tttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccagtcttctgcaatcattaaacgagtttgaatccattaa 16622645  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||| ||| ||||||  |||||||||||| || ||| ||||||| ||||| ||||||| ||||| ||||||||||    
T  16622646 acagcttttgaagcattatgttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatgaactttcttctgatga 16622730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 12174436 - 12174236
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||| ||||||||||||| ||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| | ||||||||| ||||||||  |||    
T  12174436 tttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccataa 12174337  T
Q  100 a-cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    | ||||||||||||||| ||||||||    |||||||||| || ||||||||||| || |||||||||||||||||||||||||||| | ||||||||||    
T  12174336 aacagcttttgaagctt-aagttgcatcctctgatgaactgcagcttctggtgatttttagcttctgataaacttgcttctgatgaactcgcttttgatg 12174238  T
Q  199 ac 200  Q
    ||    
T  12174237 ac 12174236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 14426609 - 14426757
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| ||||||| |||||||||||| ||||    
T  14426609 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccattaa 14426708  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctg 148  Q
    ||||||| |||||||||||||||||  |||||||||||| || ||||||    
T  14426709 acagcttctgaagctttaagttgcatctcctgatgaactgcaccttctg 14426757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 8182992 - 8183191
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    ||||||||||||||||| | || |||  ||||||| ||||||||| ||||||||||||||||| |||||| |||  ||||||||||||||| |  ||| |    
T  8182992 tttgaagaataagcatcaagtgtctttcaatcctttcaaaatagttgttgctatacttttccagtcttctgcaatcttagacgagtttgaaacttttata 8183091  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    || ||||| ||||||| |||||||  |||||||||||| || |||||||||||   |||||| |||| ||||||||||| ||||| |||||| |||||||    
T  8183092 caactttttaagctttgagttgcatctcctgatgaactgcagcttctggtgattcacagcttttgatgaacttgcttctaatgaacttgcttctgatgac 8183191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 48236998 - 48236814
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    |||||||||||||||||  |||||||  ||||||| |||| | |||||||||  || ||| || |||| | |||   ||||||||| |||||||| || |    
T  48236998 tttgaagaataagcatctgatgccttcaaatcctttcaaacttgtcgttgcttcaccttttcagtcttatgcaatgcttagacgagattgaatccattga 48236899  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||  |||||||||||| || ||||||||||| ||||||||||||| ||||||||||||||||    
T  48236898 acaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 48236814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 48062894 - 48062727
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcct 130  Q
    |||| ||||||||||||||| ||||||||||| ||||| |||| || ||| ||||||||||| | | ||||| |||||||||||||||||||||  || |    
T  48062894 cctttcaaaatagtcgttgccatacttttccagtcttcgacaatttctaggcgagtttgaattcttgaaacaacttttgaagctttaagttgcatctctt 48062795  T
Q  131 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    |||||||| || |||||||||||   |||||||||||  |||||||||||||||| |||||| |||||    
T  48062794 gatgaactgcagcttctggtgatacacagcttctgatggacttgcttctgatgaacttgcttctgatg 48062727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 30944419 - 30944271
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| ||||||  |||||||||||||||| |||   ||||||||| || |||||||| |    
T  30944419 tttgaagaataagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccaatcttctgcaatacttagacgagattaaatccgttga 30944320  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctg 148  Q
    ||| | |||||||||||||||||||  |||||||||||| || ||||||    
T  30944319 acaacctttgaagctttaagttgcatctcctgatgaactgcagcttctg 30944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 21283469 - 21283256
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    |||||| || ||||||||||||||||  ||||||| |||||| | ||||||| |||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  21283469 tttgaataacaagcatccaatgccttcaaatcctttcaaaatggacgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattga 21283370  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||| | ||||||||||||||  |||||  |||||||||||| |||||||||||||||||  ||||||||| |  || ||||||||||| ||| || ||||    
T  21283369 acaacctttgaagctttaagtcttgcatatcctgatgaacttcaacttctggtgatctt--gcttctgatgagatt-cttctgatgaacttgattctgat 21283273  T
Q  198 gaccttgcttctgatga 214  Q
    |||||||||||||||||    
T  21283272 gaccttgcttctgatga 21283256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16111980 - 16111796
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  | | ||||||||| ||||||||||  |||||| |  |||||| ||  ||||||||||| |||||||| | ||    
T  16111980 tttgaagaacaagcatccaatgccttcaatttcttccaaaaaagtcgttgcttcactttttccgtcttctgcactctttagacgaggttgaatccataaa 16111881  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||    ||||| |||| || ||||||||||| || | ||||| |||||||||||||||||||    
T  16111880 acaacttttgaagctttaagttgcatcctctgatcaactgcagcttctggtgatttttatcttctaataaacttgcttctgatga 16111796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28622452 - 28622268
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    |||||| || || |||||||||||||  ||||||| |||| ||| |||||||  ||||||| | | |||| |||   ||||||||| |||||||| || |    
T  28622452 tttgaaaaacaaacatccaatgccttcaaatcctttcaaattagccgttgcttcacttttctagtattctgcaatgcttagacgagattgaatccattga 28622353  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| |||||||||||||||||||||  |||||||||||| || ||||||||||| || ||||| |||| ||||||||||||||||    
T  28622352 acaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgatttttagcttatgatgaacttgcttctgatga 28622268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 30945452 - 30945304
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||| ||| ||||||||||||||||  ||||||| ||||||||| ||||||  ||||||||||||||||||||   ||||||||| || |||||||| |    
T  30945452 tttgaggaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccaatcttctacaatacttagacgagattaaatccgttga 30945353  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctg 148  Q
    ||| | |||||||||||||||||||  |||||||||||| || ||||||    
T  30945352 acaacctttgaagctttaagttgcatctcctgatgaactgcagcttctg 30945304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 44467130 - 44467312
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| ||| | |||||| |||   ||||||||| || ||||| || ||||     
T  44467130 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacaa 44467229  T
Q  104 c-ttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatg 183  Q
    | ||||||||||||||||  ||||  |||||||||||| || ||| ||||||||||||||||||||| |||||||||||||||    
T  44467230 ccttttgaagctttaagtcttgcatctcctgatgaacttcagcttttggtgatcttcagcttctgatgaacttgcttctgatg 44467312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 9069625 - 9069826
Alignment:
Q  2 ttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaa 100  Q
    |||||||| |||||| |||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||  || ||||| || ||    
T  9069625 ttgaagaacaagcatacaatgcctttaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgatattaaatcccttgaa 9069724  T
Q  101 cagcttttgaagctttaagtt--gcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg 198  Q
    || | ||||||||||||||||  |||  |||||||||| || | ||||||||||| ||||||||||||| |||||| ||||||| || |||||| |||||    
T  9069725 caacctttgaagctttaagttttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgtttctgataaacttgcttctgatg 9069824  T
Q  199 ac 200  Q
    ||    
T  9069825 ac 9069826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 27871808 - 27871956
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| ||||| |||||  ||||| ||| || |||  || ||||||||| | ||||| ||||||||||||||||||||| ||||||||||    
T  27871808 caaaatagccgttgccatactattccagacttctgcaatttctaggtgaatttgaatccttgaaacaacttttgaagctttaagttgcatttcctgatga 27871907  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| || |||||||||||   ||||||||||| ||||||||||||||||    
T  27871908 actgcagcttctggtgattcacagcttctgatgaacttgcttctgatga 27871956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 2913700 - 2913518
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaac-tttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||||||| | |||||| ||   |||||| ||| || ||| | || |||||    
T  2913700 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgctccacttttctagtcttctgcattgtttagatgagattaaattcattgaacag 2913601  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | ||||||| |||||||  ||||  |||||||||||||||  ||||||||||||||| |||||||| ||||||||| ||||||    
T  2913600 cctttgaagatttaagtcttgcatctcctgatgaactacagtttctggtgatcttcatcttctgatgaacttgcttttgatga 2913518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 15088586 - 15088768
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| |||||||||||| |||  ||||||| ||||||||||||||||  ||| || || |||||| |||   ||||||||| || ||||| || |||||    
T  15088586 aagaacaagcatccaatgtcttcaaatcctttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacag 15088685  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | |||||||||||| ||  ||||  |||||||||| || | |||||||||||||||||||| |||| ||||||||||||||||    
T  15088686 cctttgaagctttacgtcttgcatctcctgatgaattagagcttctggtgatcttcagcttatgatgaacttgcttctgatga 15088768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 23280054 - 23279875
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||| |||||||  ||||||||| ||||||||||   |||||| || || ||||| | ||    
T  23280054 tttgaagaacaagcatccaatgccttcaaatcctttcaaactagccgttgctccacttttccagtcttctacaatgcttagacaagattaaatccatgaa 23279955  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttc 178  Q
      ||| |||||||||||||||  ||||  ||||||||||||||||||||||||||| |||| |||||||  ||||||||||    
T  23279954 t-agcctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgattttcaccttctgacgaacttgcttc 23279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 33605747 - 33605932
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||||| |||||  | ||||||| || ||| ||    ||||||||| || |||||||| |    
T  33605747 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcattgcttcaattttccagtcatctgcattgcttagacgagattaaatccgttga 33605846  T
Q  100 acagc-ttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | ||| ||||||||||||| ||||||  |||||||||||| || ||||||||||| ||||||||||||| || | | |||||||||    
T  33605847 aaagccttttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaattcgattctgatga 33605932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 9709898 - 9709731
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||| ||||||||  ||||||| |||| ||| |||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  9709898 tttgaagaacaagcatctaatgccttcaaatcctttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattga 9709799  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||  |||||||||||| ||||||  |||||||||||| || ||||||||||| |||||||||||||    
T  9709798 acaggctttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgat 9709731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 14425536 - 14425683
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaa 136  Q
    |||||||| |||||| |||||| |||| |||||| |||  |||| ||||||||||||| | ||||| |||||||||||||||||||||  ||||||||||    
T  14425536 caaaatagccgttgccatacttntccagtcttctgcaatgttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 14425635  T
Q  137 ctacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||  | ||||||||||    || ||| || | ||||||||||||||||    
T  14425636 ctntagcttctggtgaaacacancttttgntgaacttgcttctgatga 14425683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 10883257 - 10883100
Alignment:
Q  13 gcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttgaa 111  Q
    ||||||||||||||  ||||||| ||||||||||||||||  ||| ||||| ||||||  ||   ||||||||| || ||||| || |||| | ||||||    
T  10883257 gcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgaaatgattagacgagattaaatccattgaacaacctttgaa 10883158  T
Q  112 gctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
     ||||||||  ||||  ||||||||||||||| |||||||||||||||||||||||||    
T  10883157 actttaagtcttgcatctcctgatgaactacagcttctggtgatcttcagcttctgat 10883100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 181
Target Start/End: Complemental strand, 19339319 - 19339174
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    ||||||||||||||| | ||||||||| |||||| ||| |||||| |||||| || ||| | |||||| ||||||| |||||||||  |  |||||||||    
T  19339319 caaaatagtcgttgccacacttttccagtcttctgcaatctttaggcgagttagagtccttgaaacaggttttgaaactttaagttcaatctcctgatga 19339220  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctga 181  Q
    ||| || |||||||||||   ||||||||||| |||||||||||||    
T  19339219 actgcagcttctggtgatacacagcttctgatgaacttgcttctga 19339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 33691808 - 33691624
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||| || |||||  ||| ||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |    
T  33691808 tttgaagaacaagcatctaacgcctttaaattctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattta 33691709  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgat 182  Q
    ||||| |||||||||||| ||  ||||  ||||||||||||| | ||||||||||| |||| ||||| || ||||||||||||||    
T  33691708 acagcctttgaagctttatgtcttgcatctcctgatgaactagagcttctggtgattttcaacttctaatgaacttgcttctgat 33691624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 4429107 - 4428964
Alignment:
Q  76 tttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgc 175  Q
    ||||| |||||| || ||| | |||||||||||||| |||||||||  |  ||| |||||||| || |||||||||||   ||||||||||| || ||||    
T  4429107 tttaggcgagttagagtccttgaaacagcttttgaaactttaagttcaatctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgc 4429008  T
Q  176 ttctgatgaatttgcttttgatg-accttgcttctgatgatgtc 218  Q
    |||||||||| |||||| ||||| || |||||||||||||||||    
T  4429007 ttctgatgaacttgcttctgatgaactttgcttctgatgatgtc 4428964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 21695467 - 21695649
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  |||| ||   ||||||||||||||  ||| |||   |||||| |||   ||||||||| || ||||| || ||||     
T  21695467 aagaacaagcatccaatgccttcaaatcattttgaaatagtcgttgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaa 21695566  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||||  ||||  || ||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||    
T  21695567 cttttgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatcttcagcttctgatgaacttgcttatgatga 21695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 13880170 - 13880366
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||||||||||| ||||||||  ||||||| ||||||||||||||||  |||  || | |||||| |||   ||||||||| || | ||| || |||||    
T  13880170 aagaataagcatctaatgccttcaaatcctttcaaaatagtcgttgcttcactcgtcgagtcttctgcaatgcttagacgagattaagtccattgaacag 13880269  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    | |||||||||||| ||  |||| |||||||||||||| | |||||  ||||||||||||||||||  |  ||||||||||||| |||||| ||||||    
T  13880270 cctttgaagctttatgtcttgcaattcctgatgaactagagcttctcatgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 13880366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 32264786 - 32264669
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| ||||||||||| |||||| ||| || ||| ||||||||||||| | ||| | ||||||||||||||||| |||  |||||||||    
T  32264786 caaaatagccgttgccatacttttccagtcttctgcaatttctaggcgagtttgaatccttgaaataacttttgaagctttaagtcgcatctcctgatga 32264687  T
Q  136 actacaacttctggtgat 153  Q
    ||| || |||||||||||    
T  32264686 actgcagcttctggtgat 32264669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19711109 - 19710907
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttc--caatcttctacaa-ctttagacgagtttgaatccgtt 97  Q
    ||||||| ||||||||||||||||||  ||||||| |||| |||||||||| |  ||||||  || ||||  ||   |||||||||||||||||||| ||    
T  19711109 tttgaaggataagcatccaatgccttcaaatcctttcaaattagtcgttgccac-cttttcttcagtctttcactctctttagacgagtttgaatccatt 19711011  T
Q  98 aaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttga 196  Q
    |||||||| |||||| ||||| ||||||  | |||||||||||||  |||||||||| | ||| ||||||| || | |||||||||  | |||||| |||    
T  19711010 aaacagctatttgaaactttaggttgcatcttctgatgaactacagtttctggtgatatacagtttctgatgaaatagcttctgatagacttgcttctga 19710911  T
Q  197 tgac 200  Q
    ||||    
T  19710910 tgac 19710907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 2500108 - 2500286
Alignment:
Q  9 ataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttt 107  Q
    ||||||||||||||| ||  ||||||| ||||||||| ||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |||| | ||    
T  2500108 ataagcatccaatgctttcaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacatt 2500207  T
Q  108 tgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||  ||||  ||||||  ||| | | |||||||||||| |||||||||||| ||||||||| ||||||    
T  2500208 tgaagctttaagtcttgcatctcctgaaaaacaagagcttctggtgatcctcagcttctgatgaacttgcttatgatga 2500286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 13302876 - 13303033
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||| ||||||||  ||||||| ||||||||||||||||  ||| ||| | ||||||||||   ||||||||  || ||||| || ||||     
T  13302876 aagaacaagcatctaatgccttcaaatcctttcaaaatagtcgttgcttcactcttctagtcttctacaatgcttagacgatattaaatccattgaacaa 13302975  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcag 159  Q
    | ||||||||||||||  |||||  |||| |||||||||| |||||||||||||||||    
T  13302976 cctttgaagctttaagtcttgcatctcctaatgaactacagcttctggtgatcttcag 13303033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 30026068 - 30026153
Alignment:
Q  101 cagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||| |||||||||||||||  ||||  || |||||||||| | ||||||||||||||||||||||||| ||||||||||||||||    
T  30026068 cagcgtttgaagctttaagtcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatga 30026153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 21381497 - 21381349
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| | ||||||||| |||||| ||| |||||| |||||| || ||| | ||||| |||||||| || ||||||  |  |||||||||    
T  21381497 caaaatagccgttgccacacttttccagtcttctgcaatctttaggcgagttagagtccttgaaacaacttttgaaactataagttcaatctcctgatga 21381398  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| || |||||||||||   ||||||||||| |||| |||||||||||    
T  21381397 actgcagcttctggtgatacacagcttctgatgaactagcttctgatga 21381349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 7339893 - 7339821
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctgg 149  Q
    |||||||||||| ||||| |||||||  ||||||||||||||||||||  |||||||||||| || |||||||    
T  7339893 ttagacgagtttaaatccattaaacaatttttgaagctttaagttgcatctcctgatgaactgcagcttctgg 7339821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 11319479 - 11319668
Alignment:
Q  13 gcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttgaa 111  Q
    ||||||||||| ||  ||||||| ||||||||| ||| ||  ||| || || |||||| |||   |||||| || || ||||| || |||| | ||||||    
T  11319479 gcatccaatgcattcaaatcctttcaaaatagttgttacttcactctttcagtcttctgcaatgcttagacaagattaaatccattgaacatcctttgaa 11319578  T
Q  112 gctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||| ||||  ||||  || |||||| |||||||||||||||||||||||||||||||  |  ||||||||||||| |||||||| |||||    
T  11319579 gcttgaagtcttgcatctcttgatgacctacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttttaatgac 11319668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 15467978 - 15468147
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactt---tagacgagtttgaatccgtt 97  Q
    ||||||||| ||||||||||||||||  |||||||  ||||||||||||| |  ||| ||||| |||||| ||  ||   |||||||| || ||||  ||    
T  15467978 tttgaagaacaagcatccaatgccttcaaatccttttaaaatagtcgttgattcactcttccagtcttctgca--ttgcctagacgagattaaatctatt 15468075  T
Q  98 aaacagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
     |||| | ||||||||||||||  |||||  ||||||||||||| | |||||||| ||||||||| ||||||    
T  15468076 gaacaccctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtaatcttcagcatctgat 15468147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 39284530 - 39284475
Alignment:
Q  129 ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||| || || ||||||||||||||||||||||||| ||||||||||||||||    
T  39284530 ctgatgatcttcagcttctggtgatcttcagcttctgatgaacttgcttctgatga 39284475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 331713 - 331894
Alignment:
Q  8 aataagcatccaatgccttgtaatccttccaaaa-tagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagct 105  Q
    |||||||||||||||||||   |||||| ||||| |||  ||||||  ||| ||||| |||||| |||   || |||||  |||||||| | ||||| |     
T  331713 aataagcatccaatgccttcagatcctttcaaaaatagctgttgcttcactcttccagtcttctgcaatgcttggacgaccttgaatccataaaacaacc 331812  T
Q  106 tttgaagctttaagtt-gcacttcctgatgaactacaacttctggtgatcttcagcttctgataaac--ttgcttctgatga 184  Q
    |||||||||||||||  |||  |||||||| ||| || ||||||||||||||||||||||||| |||  |||||||||||||    
T  331813 tttgaagctttaagtccgcatctcctgatggacttcagcttctggtgatcttcagcttctgatgaacttttgcttctgatga 331894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 1293114 - 1293188
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagctt 106  Q
    |||| ||||||||| ||||||||||||||||| |||| | ||| ||||| ||||||||||||| | |||||||||    
T  1293114 cctttcaaaatagttgttgctatacttttccagtcttttgcaattttagtcgagtttgaatccttgaaacagctt 1293188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 4412015 - 4411870
Alignment:
Q  53 atacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtg 151  Q
    |||||| |||| |||||| ||| || ||| |||||| || ||| | |||||||||||||| |||||||||  |  ||| |||||||| || |||||||||    
T  4412015 atacttctccagtcttctgcaatttctaggcgagttagagtccttgaaacagcttttgaaactttaagttcaatctccagatgaactgcagcttctggtg 4411916  T
Q  152 atcttcagcttctgataaacttgcttctgatgaatttgcttttgat 197  Q
    ||   ||||||||||| || |||||||| ||||| |||||| ||||    
T  4411915 ataaacagcttctgatgaatttgcttctaatgaacttgcttctgat 4411870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 16316649 - 16316454
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| |||||||||||| |||  ||||||| ||||||||  ||||||  ||| |||   |||||| ||| | ||||||| | || ||||| || ||||     
T  16316649 aagaacaagcatccaatggcttcaaatcctttcaaaatagctgttgcttcactcttctggtcttctgcaattcttagacgtgattaaatccattgaacaa 16316550  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | |||||||||||||||  ||||   ||||||||||| |||||||||||||||||  |||||||||  |  ||||||||||||| |||||| |||||||    
T  16316549 cctttgaagctttaagtcttgcatcccctgatgaacttcaacttctggtgatctt--gcttctgat-gagatgcttctgatgaacttgcttctgatgac 16316454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 138
Target Start/End: Complemental strand, 24794783 - 24794681
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    |||||||| |||||| ||||||||||| |||||| ||| || ||| |||||| || ||| | ||||| |||||||| |||| |||| || ||||||||||    
T  24794783 caaaatagccgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttttgaaactttgagttccaattcctgatga 24794684  T
Q  136 act 138  Q
    |||    
T  24794683 act 24794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19237139 - 19237022
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||| |||||||  ||| |||   |||||| |||   |||||||| || ||||| || ||    
T  19237139 tttgaagaacaagcatccaatgccttcaaatcctttcaaagtagccgttgcttcactcttctggtcttctgcaatgctagacgagattaaatcctttgaa 19237040  T
Q  101 cagcttttgaagctttaa 118  Q
    |||| |||||||||||||    
T  19237039 cagcctttgaagctttaa 19237022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 48805854 - 48805769
Alignment:
Q  130 tgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatg-accttgcttctgatga 214  Q
    ||||||||| || |||||||||||    |||||||||| ||||| ||||||||||| |||||| ||||| || |||||||||||||    
T  48805854 tgatgaactgcagcttctggtgatacatagcttctgatgaactttcttctgatgaacttgcttctgatgaactttgcttctgatga 48805769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14193176 - 14193227
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgct 52  Q
    ||||||||| |||||| |||||||||  ||||||| ||||||||||||||||    
T  14193176 tttgaagaacaagcattcaatgccttcaaatcctttcaaaatagtcgttgct 14193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 12366831 - 12366690
Alignment:
Q  14 catccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagcttttgaag 112  Q
    |||||||||| ||  ||||||| ||||||||| ||||||  ||| | ||| |||||| |||   ||| ||||| || ||||| || ||||||  ||||||    
T  12366831 catccaatgctttcaaatcctttcaaaatagttgttgcttcactctcccagtcttctgcaatgcttaaacgagattaaatccattgaacagcccttgaag 12366732  T
Q  113 ctttaagtt--gcacttcctgatgaactacaacttctggtga 152  Q
    |||||||||  |||| |||||||||||| || ||||||||||    
T  12366731 ctttaagttttgcacctcctgatgaacttcagcttctggtga 12366690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 11793046 - 11793138
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||||||| || | ||| || |||| | ||| |||||||||||  ||||  |||||||||||| || |||||||||||||| ||||||||||    
T  11793046 ttagacgagattaagtccattgaacaacctttaaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctttagcttctgat 11793138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 14193242 - 14193337
Alignment:
Q  106 tttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||||||||||  ||||  || |||||||||| | ||| ||||||||||| ||||||||| ||  ||||| ||||||| |||||| |||||||    
T  14193242 tttgaagctttaagtcttgcatctcttgatgaactagagcttatggtgatcttctgcttctgat-aagatgcttatgatgaacttgcttctgatgac 14193337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 12366705 - 12366642
Alignment:
Q  154 cttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatgatgtc 218  Q
    |||||||||||| | | ||||||||||||||  | ||||||||||| |||| |||||||||||||    
T  12366705 cttcagcttctggtgaccttgcttctgatgagat-gcttttgatgaacttgattctgatgatgtc 12366642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 60869 - 61053
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaacttt-agacgagtttgaatccgttaa 99  Q
    ||||||||| |||||| |||||||||  |||||||||||||||| |||||||||||||||||| |||||| ||| ||| |||||||||| ||||| ||||    
T  60869 tttgaagaacaagcattcaatgccttccaatccttccaaaatagccgttgctatacttttccagtcttctgcaatttttagacgagtttaaatcctttaa 60968  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| ||||||||| |||||||||||  |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  60969 acaacttttgaagttttaagttgcatctcctgatgaactacaacttctggtgattctcaacttctgataaacttgcttctgatga 61053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 215542 - 215342
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||| |||||||  ||||||| | |||||| ||| |||||||||||||||||||| ||||    
T  215542 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagccgttgcttcacttttctagtcttctgcaatctttagacgagtttgaatccattaa 215443  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatga 199  Q
    ||||||||||||| |||||||||||  ||||||| |||| || ||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||    
T  215442 acagcttttgaagttttaagttgcatctcctgataaactgcagcttctggtgattttcggcttctgataaacttgcttctgatgaacttgcttctgatga 215343  T
Q  200 c 200  Q
    |    
T  215342 c 215342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 108; Significance: 2e-54; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 65473 - 65290
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| |||  |||||||||||||||||| | |||    
T  65473 tttgaagaataagcatccaatgccctttaatcctttcaaaatagtcgtttctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa 65374  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
     |||||||||||||||||||||||  |||||||||||| || |||||||||||   ||||||||||| ||||||||||||||||    
T  65373 tagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatga 65290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 144518 - 144335
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||| |||||| |||  |||||||||||||||||| | |||    
T  144518 tttgaagaataagcatccaatgccctttaatcctttcaaaacagtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa 144419  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
     |||||||||||||||||||||||  |||||||||||| || |||||||||||   ||||||||||| ||||||||||||||||    
T  144418 tagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatga 144335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 164916 - 164776
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt 173  Q
    |||||||||||||||||||| |||||||||| |||||| ||||| ||||||  | |||||||||||||  |||| ||||| | ||||||||||  || |     
T  164916 ctttagacgagtttgaatccattaaacagctatttgaaactttaggttgcatctactgatgaactacagtttctagtgatatacagcttctgaggaaata 164817  T
Q  174 gcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||||||||  | ||| || |||||| ||||||||||||||    
T  164816 gcttctgatagacttggttctgatgaacttgcttctgatga 164776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 164991 - 164939
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgcta 53  Q
    ||||||| ||||||||||||||||||  ||||||| |||| |||| |||||||    
T  164991 tttgaaggataagcatccaatgccttcaaatcctttcaaattagttgttgcta 164939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 184
Target Start/End: Complemental strand, 78407 - 78227
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| ||||||||||||||||||||| |||| ||    
T  78407 aagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgataaatag 78308  T
Q  104 cttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||||||||| ||||  || |||||||||||| |||||||||||  |||| ||||||| ||||||||||||||||    
T  78307 cttttgaagctttaagctgcatctcatgatgaactacagcttctggtgattctcagattctgatgaacttgcttctgatga 78227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 211464 - 211643
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||| ||||| ||  ||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||    
T  211464 tttgaagaataagcatcaaatgcattaaaatccttacaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttaa 211563  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctga 181  Q
    ||| |||||||||||||||| ||||  ||||||||| ||||| |||||| | | |||  ||||||||| ||||||| |||||    
T  211564 acaacttttgaagctttaagctgcatctcctgatgagctacagcttctgataaactt--gcttctgatgaacttgcgtctga 211643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 377600 - 377403
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||| ||||||||||||  ||| ||||  |||||| |||   ||||||||| || ||||| || ||||     
T  377600 aagaacaagcatccaatgccttcaaatcctttcaatatagtcgttgcttcactcttccggtcttctgcaatgcttagacgagattaaatccattcaacaa 377501  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||| |||||||  ||||  ||||||||||||| |||||||||||||||||||||||||||  |  ||||||||||||| |||||| |||||||    
T  377500 catttgaagttttaagtcttgcatctcctgatgaactataacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 377403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 220432 - 220504
Alignment:
Q  127 tcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    |||||||||||| || |||||||||||||||||||||||||  |  ||||||||||||| |||||| |||||||    
T  220432 tcctgatgaacttcagcttctggtgatcttcagcttctgat-gaggtgcttctgatgaacttgcttctgatgac 220504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 5647 - 5446
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||| |||||| |||||||||| |||||| ||| |||||||||||||||||||| ||||    
T  5647 tttgaagaataagcatcaaatgccttcaaatcctttcaaaatagttgttgctttacttttccagtcttctgcaatctttagacgagtttgaatccattaa 5548  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaa---ctacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttga 196  Q
    ||| |||||||| |||||| |||||  | ||||||||   |  || |||||||||||  |||||||||||||||||||||||||||||  |||||| |||    
T  5547 acaacttttgaatctttaaattgcatcttctgatgaacagcagcagcttctggtgattctcagcttctgataaacttgcttctgatgaccttgcttctga 5448  T
Q  197 tg 198  Q
    ||    
T  5447 tg 5446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 2720 - 2573
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaa 136  Q
    |||||||| |||||||||||||||||| |||||| ||| ||||| ||||||||||||| | |||||||||||||| ||||| |||||| |||||||||||    
T  2720 caaaatagccgttgctatacttttccagtcttctgcaattttaggcgagtttgaatccttgaaacagcttttgaaactttaggttgcatttcctgatgaa 2621  T
Q  137 ctacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    || ||  |||||||||| | ||||||||||| ||||||||||||||||    
T  2620 ctgcagtttctggtgatttacagcttctgatgaacttgcttctgatga 2573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 22742 - 22924
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| |||||| |||   ||||||||| || ||||| || |    
T  22742 tttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattga 22841  T
Q  100 acagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctg 180  Q
    ||| | ||||||||||||||  |||||  ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  22842 acaacctttgaagctttaagtcttgcatctcctgatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctg 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 700 - 552
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| |||||||||||||||||||| | ||    
T  700 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccatcaa 601  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctg 148  Q
    ||||||| |||||||||||||||||  |||||||||||| || ||||||    
T  600 acagcttctgaagctttaagttgcatctcctgatgaactgcaccttctg 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 1773 - 1626
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaa 136  Q
    |||||||| |||||| ||||||||||| |||||| |||  |||| ||||||||||||| | ||||| |||||||||||||||||||||  ||||||||||    
T  1773 caaaatagccgttgccatacttttccagtcttctgcaatgttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 1674  T
Q  137 ctacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||  | ||||||||||    |||||| || | ||||||||||||||||    
T  1673 ctgtagcttctggtgaaacacagcttttggtgaacttgcttctgatga 1626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 7998 - 8150
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaa 100  Q
    ||||||||||||||||| |||||  |  ||||||| ||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||| | |||    
T  7998 tttgaagaataagcatcgaatgcaattcaatcctttcaaaatagtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaa 8097  T
Q  101 cagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgat 153  Q
    ||||||||||||||||||||| ||  | |||||||||| || |||||||||||    
T  8098 cagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgat 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 11 - 87
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgat 153  Q
    |||||||||||||||||| | |||||||||||||||||||||||| ||  | |||||||||| || |||||||||||    
T  11 ttagacgagtttgaatccttgaaacagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgat 87  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 17788 - 17636
Alignment:
Q  32 ccttccaaaatagtcgttgctatacttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctg 131  Q
    |||| |||||||| |||||||||||||||  | |||||| |||  |||||||||||||||||| | ||||||||||||||||||||||||| |  |||||    
T  17788 cctttcaaaatagacgttgctatacttttgtagtcttctgcaatcttagacgagtttgaatccttgaaacagcttttgaagctttaagttgtatctcctg 17689  T
Q  132 atgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||| |  | |||||||||||   ||||||||||| ||||||||||||||||    
T  17688 atgaattgaagcttctggtgattcacagcttctgatgaacttgcttctgatga 17636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 184
Target Start/End: Complemental strand, 23551 - 23424
Alignment:
Q  57 ttttccaatcttctacaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    ||||||| |||||| |||  |||||||||||||||||| | |||||||||||||||||||||||||||  |||||||||||| || |||||||||||       
T  23551 ttttccagtcttctgcaatcttagacgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattca 23452  T
Q  157 cagcttctgataaacttgcttctgatga 184  Q
    ||||||||||| ||||||||| ||||||    
T  23451 cagcttctgatgaacttgcttttgatga 23424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25444 - 25384
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttc 61  Q
    ||||||||||||  |||||||||| |  ||||||| |||||||||||||||||||||||||    
T  25444 tttgaagaataactatccaatgcccttcaatcctttcaaaatagtcgttgctatacttttc 25384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 7769 - 7948
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    |||||||||||| ||| |||||||||  |||||||||||||||||||| |||  ||| ||||| |||| | |||   ||||||||| || ||||| || |    
T  7769 tttgaagaataaacatacaatgcctttaaatccttccaaaatagtcgtggcttcactcttccagtcttttgcaatgcttagacgagattaaatccattga 7868  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgctt 177  Q
    ||||| |||||||||||||||  ||||  |||||||||| || | ||||||||||||||||||||||||| |||||||||    
T  7869 acagcctttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgatcttcagcttctgatgaacttgctt 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 90100 - 89916
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||| ||||| |  ||| ||||| ||||||  ||   ||||||||| || ||| | || |    
T  90100 tttgaagaacaagcatccaatgccttcaaatcctttcaaaatagccgttggttcactcttccagtcttctgtaatacttagacgagattaaatacattga 90001  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
     || | |||||||||||||||||||  |||||||||||| || ||||||||||| ||||||||||||| ||||||||||||||||    
T  90000 tcaacctttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 89916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 246215 - 246108
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgct 176  Q
    |||| ||||||||||||| | ||||| |||||||||||||||||||||  |||||||||||| ||||||||||||||   ||||||||||| ||||||||    
T  246215 ttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgct 246116  T
Q  177 tctgatga 184  Q
    ||||||||    
T  246115 tctgatga 246108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 6239 - 6074
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| |||||||  || ||||     
T  6239 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacat 6140  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | |||||||||||||||  ||||  |||||||||| |||||||||||| |||||||||||||||||    
T  6139 cctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgat 6074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1744 - 1606
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaac-tttagacgagtttgaatccgttaa 99  Q
    ||||||||| || |||||| ||||||  ||||||| ||||||||||||||||  ||||||| | |||||| |||  |||| |||||||||||||| ||||    
T  1744 tttgaagaacaatcatccagtgccttcaaatcctttcaaaatagtcgttgcttcacttttcaagtcttctgcaatatttaaacgagtttgaatccattaa 1645  T
Q  100 acagcttttgaagctttaagttgcacttcctgatgaact 138  Q
    ||||||||||||||||| |||||||  ||||||||||||    
T  1644 acagcttttgaagctttgagttgcatctcctgatgaact 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 513 - 472
Alignment:
Q  143 cttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  513 cttctggtgattttcagcttctgatgaacttgcttctgatga 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 49402 - 49567
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| ||||||  ||| ||| |||||||| |||   ||||||||| || ||||| || ||||     
T  49402 aagaacaagcatccaatgccttcaaatcctttcaaaatagtagttgcttcactcttcaaatcttctgcaatgcttagacgagattaaatccattgaacaa 49501  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
      ||||||||||||||  |||||  |||||||||||||||||||||||||||||||||||||||||    
T  49502 actttgaagctttaagacttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat 49567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 315 - 189
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt 173  Q
    |||||||||||||||||||| |||||||||| |||||| ||||| ||||||  | |||||||| ||||  |||||||||| | |||||||||||| ||||    
T  315 ctttagacgagtttgaatccattaaacagctatttgaaactttaggttgcatcttctgatgaagtacagtttctggtgatatacagcttctgatagactt 216  T
Q  174 gcttctgatgaatttgcttttgatgac 200  Q
    ||||||||| || |||||| |||||||    
T  215 gcttctgataaacttgcttctgatgac 189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 32555 - 32737
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||| ||||| ||  ||||||| ||||||||||||| ||  ||| ||||| |||||| |||   ||||||||| || ||||| || |||||    
T  32555 aagaacaagcatcaaatgcattcaaatcctttcaaaatagtcgttacttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacag 32654  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
      |||||||||||||||  ||||  |||||||||||||||| || |||||||||| |||||||||| ||||| ||||||||||    
T  32655 tctttgaagctttaagtcttgcatctcctgatgaactacaagttgtggtgatctttagcttctgatgaacttacttctgatga 32737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 390 - 338
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgcta 53  Q
    ||||||| ||||||||||||||||||  ||||||| |||| ||| ||||||||    
T  390 tttgaaggataagcatccaatgccttcaaatcctttcaaattagccgttgcta 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 143154 - 143340
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa--ctttagacgagtttgaatccgtta 98  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||||||  ||| ||||| |||||| |||  |||| |||||| || ||||| ||     
T  143154 tttgaagaacaagcatccaatgcctttaaatccttccaaaatagtcgttgcttcactcttccagtcttctgcaatgcttt-gacgagattaaatccattg 143252  T
Q  99 aacagcttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    || ||| ||| ||||||| ||  |||||  || ||||||| || | ||||| ||||||||||||||||||| ||||||||||||||||    
T  143253 aatagcctttcaagctttgagtcttgcatctcgtgatgaaatagagcttctagtgatcttcagcttctgatgaacttgcttctgatga 143340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 34822 - 34674
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    ||||||| ||||||| ||||||||||| |||||| ||| || ||| ||||||||||||| | ||||| |||||||| ||||||||||||  |||||| ||    
T  34822 caaaatattcgttgccatacttttccagtcttctgcaatttctaggcgagtttgaatccttgaaacaacttttgaaactttaagttgcatctcctgaaga 34723  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| || ||||| |||||   ||||||||||| ||||||||||||||||    
T  34722 actgcagcttctagtgatacacagcttctgatgaacttgcttctgatga 34674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 25673 - 25519
Alignment:
Q  47 gttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaactt 145  Q
    ||||| ||||||||||| |||| | ||| || ||| ||||||||||||| | ||||| |||||||| ||||||||||||  |||||||||||| || |||    
T  25673 gttgccatacttttccagtcttttgcaatttctaggcgagtttgaatccttgaaacaacttttgaaactttaagttgcatctcctgatgaactgcagctt 25574  T
Q  146 ctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||||    |||||||||| || |||||||||||||| |||||| |||||||    
T  25573 ctggtgatacatagcttctgatgaagttgcttctgatgaacttgcttctgatgac 25519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 30294 - 30459
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||| ||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| |||||||  || ||||     
T  30294 aagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacat 30393  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | |||||||||||||||  ||||  |||||||||| |||||||||||| |||||||||||||||||    
T  30394 cctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgat 30459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 10039 - 10219
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    |||| |||||||||||||| ||  ||||||| ||||||||||||| ||  ||| ||| | |||||| |||   ||||||||| |||||||| || || ||    
T  10039 aagagtaagcatccaatgctttcaaatcctttcaaaatagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatag 10138  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    | ||||||||||||||  |||||  |||||||||||| |||||||| ||||||||  ||||||||| ||||||||||||||||    
T  10139 cctttgaagctttaagtcttgcatctcctgatgaacttcaacttcttgtgatctt--gcttctgatgaacttgcttctgatga 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 4988 - 4791
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| || |||||||||||||  ||||||| |||||||||||| |||  ||| || || ||||||||||   ||||||||| || ||||| || |||||    
T  4988 aagaacaaacatccaatgccttcaaatcctttcaaaatagtcgtcgcttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacag 4889  T
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | |||||||||||||||  ||||  | ||||||||||| | |||||||||||||||||||| ||||  |  ||||||||||||| |||||| |||||||    
T  4888 cctttgaagctttaagtcttgcatcttctgatgaactagagcttctggtgatcttcagcttatgat-gagatgcttctgatgaacttgcttctgatgac 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 17089 - 17197
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt 173  Q
    |||||||||||||||||||| ||||||| || |||||| ||||| |||||| || |||||||||||||| |||||||||| | ||||||||||| || |     
T  17089 ctttagacgagtttgaatccattaaacaactatttgaaactttaggttgcattttctgatgaactacaatttctggtgatatacagcttctgatgaaata 17188  T
Q  174 gcttctgat 182  Q
    |||||||||    
T  17189 gcttctgat 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 39569 - 39676
Alignment:
Q  78 tagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgc 175  Q
    |||||||| || ||||| || |||||| ||||||||||||| |  ||||  ||||||||||||| | ||||||||||||||||||||||||| |||||||    
T  39569 tagacgagattaaatccattgaacagcctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgc 39668  T
Q  176 ttctgatg 183  Q
    ||||||||    
T  39669 ttctgatg 39676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 137629 - 137736
Alignment:
Q  78 tagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgc 175  Q
    |||||||| || ||||| || |||||| ||||||||||||| |  ||||  ||||||||||||| | ||||||||||||||||||||||||| |||||||    
T  137629 tagacgagattaaatccattgaacagcctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgc 137728  T
Q  176 ttctgatg 183  Q
    ||||||||    
T  137729 ttctgatg 137736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 18662 - 18465
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||| ||||||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |||||    
T  18662 aagaacaagtatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacag 18563  T
Q  104 cttttgaagctttaa--gttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | |||||||||||||   |||    |||||||||||| || |||||||||||||||||||| ||||  |  ||||||||||||| |||||| |||||||    
T  18562 cctttgaagctttaaatcttgtgtctcctgatgaactgcagcttctggtgatcttcagcttatgat-gagatgcttctgatgaacttgcttctgatgac 18465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 26016 - 25851
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||||||||| |||| | |||   ||||||||| || ||||| || ||||     
T  26016 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttttgcaatgcttagacgagattaaatccattgaacaa 25917  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    | ||||| ||||||||  |||||  ||||||||| ||  | |||||||||||||||||||||||||    
T  25916 cctttgacgctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgat 25851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 545 - 742
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||||  ||| ||||| |||||| |||   ||||||||| || ||||  || ||||     
T  545 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacat 644  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||| ||||||||  |||||  ||||||||| ||  | |||||||||||||||||||||||||  |  |||||||||| || |||||| |||||||    
T  645 cctttgacgctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgat-gagatgcttctgataaacttgcttctgatgac 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 184
Target Start/End: Complemental strand, 839 - 691
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    ||||||||  ||||| ||||||||| | |||||| ||| || |||||||||| || ||| | |||||||||||||| ||||||||| ||  |||||||||    
T  839 caaaatagctgttgccatacttttctagtcttctgcaatttatagacgagttagagtccttgaaacagcttttgaaactttaagtttcatctcctgatga 740  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| ||  |||||||||    ||||||||||| ||||||||||| ||||    
T  739 actgcagtttctggtgaaacacagcttctgatgaacttgcttctaatga 691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 12279 - 12476
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||||||||||||||||| ||  ||| ||| ||||||||| ||||||  ||| ||||| |||||| |||   ||||||||| || ||| | || |||||    
T  12279 aagaataagcatccaatgctttcaaattctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaattcattgaacag 12378  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||||||||||  |||    ||||||||||||| | |||||||||||| ||| ||||||||  |  ||||||||||||| |||||| |||||||    
T  12379 cctttgaagctttaagtcttgtgtctcctgatgaactagagcttctggtgatcctcaacttctgat-gagatgcttctgatgaacttgcttctgatgac 12476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 1730 - 1884
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    |||| |||||||||||||| ||  ||||||| |||||||||||||| |  ||| ||| | |||||| |||   ||||||||| |||||||| || ||||     
T  1730 aagagtaagcatccaatgctttcaaatcctttcaaaatagtcgttgtttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaacaa 1829  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||||||||||||||  |||||  |||||||||||| || ||||||||||||||    
T  1830 cctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 21016 - 20850
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||||||||||||||||||||  ||||||| ||||||   |||||||  ||| ||| | |||||| |||   ||||||||| || ||||  || |    
T  21016 tttgaagaataagcatccaatgccttcaaatcctttcaaaatgaccgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatcaattga 20917  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttct 164  Q
    ||| | |||||||||||||||  ||||  || ||||||||| |||||| ||||||||||||||||||    
T  20916 acaacctttgaagctttaagtcttgcatctcttgatgaacttcaacttttggtgatcttcagcttct 20850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 60086 - 60240
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacag 103  Q
    ||||| |||||||||||| |||  ||||||| ||||||||||||||||  ||||||||| |||||| ||| | || |||||| || ||||| || ||||     
T  60086 aagaacaagcatccaatggcttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaattcttggacgagattaaatccattgaacat 60185  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||||||||||||||  |||||  | ||||||||||  | ||||||||||||||    
T  60186 cctttgaagctttaagtcttgcatcttctgatgaactttagcttctggtgatctt 60240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 7996 - 8150
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||  ||  ||||||| ||||||||||||||||  |||||| || ||||||||||   || |||||| || ||||| || ||||     
T  7996 aagaacaagcatccaatgaattcaaatcctttcaaaatagtcgttgcttcacttttacagtcttctacaatgcttggacgagattaaatccattgaacaa 8095  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||||||||||||||  |||||  ||||||||||||  | |||||||| |||||    
T  8096 cctttgaagctttaagttttgcatctcctgatgaactttagcttctggttatctt 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10143 - 9983
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaaacagc-tttt 108  Q
    ||||||||||||||||  ||||||| ||||||||||||||||  ||| ||| | |||||| |||   ||||| ||| || ||||| || |||| | ||||    
T  10143 aagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactcttctagtcttctgcaaagcttagatgagattaaatccattgaacaacctttt 10044  T
Q  109 gaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgat 167  Q
    ||||||||||||  ||||  |||||||||||| || ||||||||||| ||||| |||||||    
T  10043 gaagctttaagtcttgcatctcctgatgaacttcagcttctggtgattttcagtttctgat 9983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 14724 - 14927
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttg 109  Q
    ||||||||||||||||  ||||||| ||||||||| ||||||  ||| ||||| |||||| |||   ||||||||| || ||||| || |||| | ||||    
T  14724 aagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttg 14823  T
Q  110 aagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgctt 207  Q
    ||||||||||  ||||| ||||| ||||  |  | ||||||||||||||  |||||||||  |  || |||| ||||| | |||| ||||||||||||||    
T  14824 aagctttaagtcttgcatttcctaatgatttttagcttctggtgatctt--gcttctgat-gagatgtttctaatgaactagcttctgatgaccttgctt 14920  T
Q  208 ctgatga 214  Q
    |||||||    
T  14921 ctgatga 14927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 27474 - 27290
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaact-ttagacgagtttgaatccgttaa 99  Q
    ||||||||  ||||||||||||||||  ||||||  ||||||||  ||||||  ||| || || |||||| |||   ||||||||| || ||| | || |    
T  27474 tttgaagagcaagcatccaatgccttcgaatcctatcaaaatagctgttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattga 27375  T
Q  100 acagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    ||| | |||||||||||||||  ||||  |||||||||||| || | ||||||||||||  ||||||||| ||||||||||||||||    
T  27374 acaacctttgaagctttaagtcttgcatctcctgatgaacttcagcatctggtgatctt--gcttctgatgaacttgcttctgatga 27290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 36816 - 36619
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||| |||||||||||  ||||||| | || ||| |||   ||||||||| || ||| | || | |||    
T  36816 aagaacaagcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcag 36717  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||||||||||  |||||  || ||||||||| || ||||| ||||||||| |||||||||  |  ||||||| ||||| |||||| |||||||    
T  36716 cctttgaagctttaagtcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgat-gagatgcttctaatgaacttgcttctgatgac 36619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 42189 - 42386
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| |||| |||||||||||  ||||||| | || ||| |||   ||||||||| || ||| | || | |||    
T  42189 aagaacaagcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcag 42288  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    | ||||||||||||||  |||||  || ||||||||| || ||||| ||||||||| |||||||||  |  ||||||| ||||| |||||| |||||||    
T  42289 cctttgaagctttaagtcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgat-gagatgcttctaatgaacttgcttctgatgac 42386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2775 - 2707
Alignment:
Q  1 tttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttct 70  Q
    ||||||||||| ||||||||||| ||  || |||||||||||||||||||| ||||||||||| ||||||    
T  2775 tttgaagaatacgcatccaatgctttccaa-ccttccaaaatagtcgttgcaatacttttccagtcttct 2707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 200
Target Start/End: Complemental strand, 87618 - 87456
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaactt-tagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    ||||||||||||||| |||||||| || |||||| ||| || ||| | |||| || ||| | |||||||||||||| |||||||||  |  ||||||| |    
T  87618 caaaatagtcgttgccatactttttcagtcttctgcaatttctaggcaagttagagtccttgaaacagcttttgaaactttaagttcaatctcctgataa 87519  T
Q  136 actacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||  ||||| ||| |||  |||| |||| ||||||||| ||||||| | |||| |||||||    
T  87518 actacagtttctgatgaactt--gcttttgatgaacttgcttatgatgaactagcttctgatgac 87456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 87510 - 87457
Alignment:
Q  161 ttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    ||||||| ||||||||| ||||||| |||||| |||||| || |||||||||||    
T  87510 ttctgatgaacttgcttttgatgaacttgcttatgatgaactagcttctgatga 87457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 1649 - 1521
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaac-t 172  Q
    |||| ||||||  |||||||  ||||||||| |||||| ||||| ||||||  | ||||||||||| | |||||||||||   ||||||||||| ||| |    
T  1649 ctttggacgaggctgaatccaataaacagctatttgaaactttaggttgcatcttctgatgaactatagcttctggtgatacacagcttctgatgaactt 1550  T
Q  173 tgcttctgatgaa-tttgcttttgatgac 200  Q
    ||||||||||||| ||||||| |||||||    
T  1549 tgcttctgatgaactttgcttctgatgac 1521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 9322 - 9238
Alignment:
Q  127 tcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||||||||||| || ||||||||||||||  ||||||||| |  | |||||||||||| || ||| |||||||||||||||||||||    
T  9322 tcctgatgaacttcagcttctggtgatctt--gcttctgatgagat-gcttctgatgaactttcttctgatgaccttgcttctgatga 9238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 5880 - 5801
Alignment:
Q  104 cttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctga 181  Q
    |||||||||||||||||  ||||  |||| ||||||| || |||||||||||||| |||||||||| ||||| |||||||    
T  5880 cttttgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatctttagcttctgatgaacttacttctga 5801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 5731 - 5577
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||   |||||| ||||||||  ||||||  ||| ||||||||||||||||   || |||||| || ||||| || ||||     
T  5731 aagaacaagcatccaatgccttcatatcctttcaaaatagatgttgctccactcttccaatcttctacaatacttggacgagattaaatccattgaacaa 5632  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatctt 156  Q
    | ||||||||| ||||  |||||  |||||||||||| || |||| |||||||||    
T  5631 cctttgaagctctaagtcttgcatctcctgatgaacttcagcttcaggtgatctt 5577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 4961 - 4837
Alignment:
Q  77 ttagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttg 174  Q
    ||||||||| || ||||| || |||| | |||||||||||||||  ||||  || ||||||| || ||||| ||||||||| |||||||| ||||  | |    
T  4961 ttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcttgatgaattaaaacttttggtgatctccagcttctaataagat-g 4863  T
Q  175 cttctgatgaatttgcttttgatgac 200  Q
    ||| ||||||| ||||||||||||||    
T  4862 cttttgatgaacttgcttttgatgac 4837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 192
Target Start/End: Complemental strand, 827 - 640
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacag 103  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||  ||||  ||| ||||| |||||| |||   ||||||||| || ||| | || |||||    
T  827 aagaacaagcatccaatgccttcaaatcctttcaaaatagtcagtgcttcactattccagtcttctgcaatgcttagacgagattaaattcattgaacag 728  T
Q  104 cttttgaagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgctt 192  Q
      ||||||| ||||||  |||||  ||||||||||||  | ||||||||||||||  |||||||||  |  ||||||||||||| ||||||    
T  727 tctttgaagttttaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgat-gagatgcttctgatgaacttgctt 640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 11557 - 11641
Alignment:
Q  130 tgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    ||||||||| || |||||||||||    ||||| |||| ||||||||| ||||||| |||||| |||||| || |||||||||||    
T  11557 tgatgaactgcagcttctggtgatacatagcttatgatgaacttgcttttgatgaacttgcttctgatgaactagcttctgatga 11641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 38055 - 37947
Alignment:
Q  75 ctttagacgagtttgaatccgttaaacagct-tttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaactt 173  Q
    |||||||||| ||||||||| ||||| |||| ||| || ||||| ||||||  ||||||||||||| |  |||||||||| | ||||||| ||| || |     
T  38055 ctttagacgaatttgaatcctttaaatagctatttaaaactttaggttgcatctcctgatgaactatagtttctggtgatatacagcttccgatgaaata 37956  T
Q  174 gcttctgat 182  Q
    |||||||||    
T  37955 gcttctgat 37947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 1766 - 1969
Alignment:
Q  11 aagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttg 109  Q
    ||||||||||||||||  ||||||| ||||||||| ||||||  |||  |||| |||||| |||   ||||||||| || ||||| || |||| | ||||    
T  1766 aagcatccaatgccttcaaatcctttcaaaatagttgttgcttcactcctccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttg 1865  T
Q  110 aagctttaag--ttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgctt 207  Q
    ||||||||||  ||||| ||||| ||||  |  | ||||| ||||||||  |||||||||  |  || |||| ||||| | |||| ||||||||||||||    
T  1866 aagctttaagtcttgcatttcctaatgatttttagcttctagtgatctt--gcttctgat-gagatgtttctaatgaactagcttctgatgaccttgctt 1962  T
Q  208 ctgatga 214  Q
    |||||||    
T  1963 ctgatga 1969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 167
Target Start/End: Complemental strand, 5342 - 5211
Alignment:
Q  37 caaaatagtcgttgctatacttttccaatcttctacaa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatga 135  Q
    ||||||||  ||||| | || |||||| |||||| ||| |||||| |||||| || ||| | |||||||||||||| || ||||||  |  |||||||||    
T  5342 caaaatagctgttgccacacatttccagtcttctgcaatctttaggcgagttagagtccttaaaacagcttttgaaactataagttcaatctcctgatga 5243  T
Q  136 actacaacttctggtgatcttcagcttctgat 167  Q
    ||| || |||||||||||   |||||||||||    
T  5242 actgcagcttctggtgatacacagcttctgat 5211  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 864 - 963
Alignment:
Q  82 cgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctga 181  Q
    |||| |||||||| | |||||||||||||||||||| ||||  |||  |||||| || || |||||||||| |||  |||| |||| |||||||||||||    
T  864 cgagcttgaatccttgaaacagcttttgaagctttaggttgatctt-ttgatgatctgcagcttctggtgaactt--gcttatgatgaacttgcttctga 960  T

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Target: scaffold0211 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 15504 - 15462
Alignment:
Q  158 agcttctgataaacttgcttctgatgaatttgcttttgatgac 200  Q
    ||||||||||| |||||||||||||||| |||||| |||||||    
T  15504 agcttctgatagacttgcttctgatgaacttgcttctgatgac 15462  T

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Target: scaffold0211; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 15533 - 15463
Alignment:
Q  144 ttctggtgatcttcagcttctgataaacttgcttctgatgaatttgcttttgatgaccttgcttctgatga 214  Q
    |||||||||| | ||||||||||| || | |||||||||  | |||||| |||||| ||||||||||||||    
T  15533 ttctggtgatatacagcttctgatgaaatagcttctgatagacttgcttctgatgaacttgcttctgatga 15463  T

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Target: scaffold0426 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 13641 - 13706
Alignment:
Q  5 aagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccaatcttct 70  Q
    ||||| || |||||||||||||  ||||||| ||||||||| ||||||  ||| ||||||||||||    
T  13641 aagaacaaacatccaatgccttcaaatcctttcaaaatagttgttgcttcactattccaatcttct 13706  T

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Target: scaffold0364 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 6203 - 6256
Alignment:
Q  129 ctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 184  Q
    |||||||||| |||||||| ||||| ||  ||||||||| ||||||||||||||||    
T  6203 ctgatgaacttcaacttctagtgatatt--gcttctgatgaacttgcttctgatga 6256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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