View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16040_high_7 (Length: 489)
Name: NF16040_high_7
Description: NF16040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16040_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 16 - 472
Target Start/End: Complemental strand, 30415813 - 30415357
Alignment:
| Q |
16 |
atcaaagaacaaatgctataagagtaaccctgcatccaagagcaggaacttcatctcttccacaactatatgaagctgaaattgttataaactcccattt |
115 |
Q |
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| T |
30415813 |
atcaaagaacaaatgctataagagtaaccctgcatccaagagcaggaacttcatctcttccacaactatatgaagctgaaattgttataaactcccattt |
30415714 |
T |
|
| Q |
116 |
accttgggctaaagagttaattcgaaattggaagtggactttttatgtttgggtgtcattatatgtgtacattgtgctacttatgcttctcttatattgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
30415713 |
accttgggctaaagagttaattcgaaattggaagtggactttctatgtttgggtgtcattatatgtgtacatcgtgctacttatgcttctcttatattgt |
30415614 |
T |
|
| Q |
216 |
tacaggccactcatctttcttgtcacacaagaaacttttagtgagcaaagggtgagggaagtgataagtgaagaacataatgacttacaagttggagatt |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
30415613 |
tacaggccactcatctttcttgtcacacaagaaacttttagtgagcaaagggtgagggaagtgataagtgaagaacataaagacttacaagttggagatt |
30415514 |
T |
|
| Q |
316 |
tatcaggagatgagagtgaggtttctgagttgttgaggaaatggagacttagcagaagcaagagaaagacgatcctgacacatggtagtgttggtgtgcc |
415 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30415513 |
tatcaggagatgagagtgaagtttctgagttgttgaggaaatggagacttagcagaagcaagagaaagacgatcctgacacatggtagtgttggtgtgcc |
30415414 |
T |
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| Q |
416 |
agaagcaattggcgaggcttctagtattagcatgacgactactagagaagatgtaac |
472 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30415413 |
agaagcaattggcgaggcttctagtattagcatgacgactactagagaagatgtaac |
30415357 |
T |
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