View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16041_high_15 (Length: 283)
Name: NF16041_high_15
Description: NF16041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16041_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 11 - 271
Target Start/End: Complemental strand, 43713833 - 43713573
Alignment:
| Q |
11 |
cagagaggtgtgaagagtaaatggctaatgtttcaagcttttttagtagtccaatagttggtggaatgaaacctgagatgcttgtttctgctaagcccaa |
110 |
Q |
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| T |
43713833 |
cagagaggtgtgaagagtaaatggttaatgtttcaagcttttttagtagtccaatagttggtggaatgaaacctgagatgcttgtttctgctaagcccaa |
43713734 |
T |
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| Q |
111 |
catgatcaaattggaacagtgtccaatttcctgtggtataggtccttctagattcttgtttcctccagctcttatcacttgaagattcttcatgttgccg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
43713733 |
catgatcaaattggaacagtgtccaatttcctgtggtataggtccttctagattcttgtttcctccagctcttatcacttgaagattcttcatgttgcgg |
43713634 |
T |
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| Q |
211 |
attgtgtttggaattttgccactgagctgattgtcatatagggtcagctttgttaattttg |
271 |
Q |
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| T |
43713633 |
attgtgtttggaattttgccactgagctgattgtcatatagggtcagctttgttaattttg |
43713573 |
T |
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