View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16042_low_7 (Length: 388)
Name: NF16042_low_7
Description: NF16042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16042_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 4846055 - 4845713
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||||| ||||| |
|
|
| T |
4846055 |
aaaatgtaaccttaccatataagtaaaactagaatcaacttcgaaattccaagttacattataatcctctgtcacatactttccataacttcttgcagtt |
4845956 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
4845955 |
aagtatacagcttctggtgcagtgtaatttggaatagtattgtttaaatagtttagatgatcacttccataaaaacttgatacactaagtggatattctt |
4845856 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4845855 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
4845756 |
T |
|
| Q |
301 |
ctccaaatctttatcatttcgaatttcgtattcgctgttgtca |
343 |
Q |
| |
|
||||||| |||||||||| |||||||||||||| ||||||||| |
|
|
| T |
4845755 |
ctccaaagctttatcattacgaatttcgtattctctgttgtca |
4845713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 4630982 - 4631275
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |
|
|
| T |
4630982 |
aaaatgtaatcttaccatataagtaaaagaagaatcaacttcaaaattccaagttacattgtaatcctttgttgcatccattccataacttctcgcagtt |
4631081 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||| |
|
|
| T |
4631082 |
aagtaaacagcttctggtgcagtgtaatttgaaatggtattgtttaaatagtttagatgat---gtccaaaataacttgatacactaagtggatattctt |
4631178 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaac |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
4631179 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcataatttggtggaacttgattttcaccagcgttgactctataaac |
4631275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 4712115 - 4711773
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
4712115 |
aaaatgtaaccttaccatataagtaaaactagaatcaactttgaaattccaagttacattataatcctctgtcacatccattccataacttcttgcagta |
4712016 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||| |
|
|
| T |
4712015 |
aagtatacagcttctggtgcagtgtaattgggaatggtattgtttaaatagtttggatgatcacttccataaacagttgatacactttgtggatattctt |
4711916 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
| |||| |||| ||||||||||| |||||||||| ||||||||||||||||| | ||||| |||||||||||| |||||| ||||||||||| ||||| |
|
|
| T |
4711915 |
tttccaggtaaagaggaaaatcactgtcccaattacgaaacatacctgtatcttggtttggtggaacttgattttgaccaacgttgactctatataccat |
4711816 |
T |
|
| Q |
301 |
ctccaaatctttatcatttcgaatttcgtattcgctgttgtca |
343 |
Q |
| |
|
|||||| |||| || || |||||| |||||| |||||||| |
|
|
| T |
4711815 |
ttccaaagctttgtcgttatgaatttggtattccgtgttgtca |
4711773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 4663046 - 4663301
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||||||||||||||| || || |||||||||||||| |||||||||||||||||||| ||||||||||| ||| | |||||||| |||| ||||| |
|
|
| T |
4663046 |
aaaatgtaaccttaccatgtatgtaaaagaagaatcaacctcaaaattccaagttacattataatcctctgtcacatactttccataatttcttgcagtt |
4663145 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||||||| | |||||||||| |
|
|
| T |
4663146 |
aagtatacagtttctggtgcagtgtaatttggaatggtattgtttaaatagtttagatgatc---tccaaaatcacttgatacactttgtggatattcta |
4663242 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcactt |
259 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
4663243 |
tctccaagtaacgaggagaatcattttcccaataacgaaacatacctgtatcatcactt |
4663301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 4666993 - 4667297
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||| ||||||||||||||||| ||| ||||||||||| ||||||||| || ||||| |||| |||| |||||||||||||||||||||| ||||| |
|
|
| T |
4666993 |
aaaatgcaaccttaccatataagtaaaaatagaatcaactttaaaattccatgtcacattataattctctttggcatccattccataacttcttgcagtt |
4667092 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||| ||| ||||||||||| ||||||| ||||| ||||| | |||||||||| |||||||| |||| || |||||||| || | |||||||| || |
|
|
| T |
4667093 |
aagtacacaacttctggtgcagtgtaatttggaatagtattttgtaaatagtttggatgatcaggtccaaaataacttgatatgctttgtggatattgtt |
4667192 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||| |||||||| |||||||||| |||||||||||||| | |
|
|
| T |
4667193 |
tctccaagtaacgaggaaaatcattgtcccaattacgaaacataccagtatcgtcaccaggtggaacttgactttcaccaacgctgactctataaaccgt |
4667292 |
T |
|
| Q |
301 |
ctcca |
305 |
Q |
| |
|
||||| |
|
|
| T |
4667293 |
ctcca |
4667297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 4636912 - 4637220
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||| ||| ||| |||||| |||||||| ||||| |
|
|
| T |
4636912 |
aaaatgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattataatcctttgtctcatacattccgtaacttcttgcagtt |
4637011 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||| ||| ||||||||||| ||||||| |||||| ||||||| ||| |||| | || | | | |||||||||||||| ||| || |||| |
|
|
| T |
4637012 |
aagtacacaacttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttatgtgt---aaagtcacttgatacactagatgggtactctt |
4637108 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
4637109 |
tctccaagtaaagaggaaaatcattgccccaattgcgaaacatacctgtatcatcacttggtggaacttgattttgaccaacgttgactctataaaccat |
4637208 |
T |
|
| Q |
301 |
ctccaaatcttt |
312 |
Q |
| |
|
||||||| |||| |
|
|
| T |
4637209 |
ctccaaagcttt |
4637220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 4863977 - 4864276
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||| ||||| |
|
|
| T |
4863977 |
aaaatgtaaccttaccatataagtaaaattagaatcaacttcaaaattccaagttacattgtactcctctgtggcatactgtccgtaacttcttgcagtt |
4864076 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||| ||| ||||||||||| ||||||| ||||||| |||||| |||||| ||||||| | | || ||||||||| || | |||||||| || |
|
|
| T |
4864077 |
aagtacacaacttctggtgcagtgtaattttgaatggtgttgttttcatagttaagatgat---gtttaaaatcacttgatatgctttgtggatattgtt |
4864173 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||| ||||||| |||||||||||||||||| | |
|
|
| T |
4864174 |
tctccaagtaacgaggaaaatcattgtcccaattacgaaacataccagtatcatcacccggtggaacttgactttcaccgacattgactctataaaccgt |
4864273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 4816304 - 4815959
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
4816304 |
aaaatgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattgtaatcctctgtctcatacattccataacttcttgcagtt |
4816205 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||||||| ||||||||||| ||||||| |||||| ||||||| ||| |||| | || | | | |||||||||||||| ||| || |||| |
|
|
| T |
4816204 |
aagtaaacaccttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttat---gtgtaaagtcacttgatacactagatgggtactctt |
4816108 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||| |||||||| | ||| | |||||||||||| |||||| ||||||||||||||| | |
|
|
| T |
4816107 |
tctccaagtaacgaggagaatcattgtcccaattacgaaacatgcctgtatcttggtttgctggaacttgattttgaccaacgttgactctataaaccgt |
4816008 |
T |
|
| Q |
301 |
ctccaaatctttatcatttcgaatttcgtattcgctgttgtcagaacca |
349 |
Q |
| |
|
||| ||| |||| | || ||| || |||||| |||||||||||||| |
|
|
| T |
4816007 |
ctctaaagctttgttgttaagaacttggtattccgtgttgtcagaacca |
4815959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 4783875 - 4783567
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
4783875 |
aaaatgtaaccttaccatataagtaaaagcagaatcaacttcaaagttccaagttacattgtaatcctctgtctcatacattccataacttcttgcagtt |
4783776 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||||||| ||||||||||| ||||||| |||||| ||||||| ||| |||| | || | | | |||||||||||||| ||| || |||| |
|
|
| T |
4783775 |
aagtaaacaccttctggtgcaatgtaatttggaatgacattgtttttatatgttaggttat---gtgtaaagtcacttgatacactagatgggtactctt |
4783679 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||| |||||||| | ||| | |||||||||||| |||||| ||||||||||||||| | |
|
|
| T |
4783678 |
tctccaagtaacgaggagaatcattgtcccaattacgaaacatgcctgtatcttggtttgctggaacttgattttgaccaacgttgactctataaaccgt |
4783579 |
T |
|
| Q |
301 |
ctccaaatcttt |
312 |
Q |
| |
|
||| ||| |||| |
|
|
| T |
4783578 |
ctctaaagcttt |
4783567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 4653575 - 4653868
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||||||||| ||||||||||| || | || |||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
4653575 |
aaaatgtaacctgaccatataagtaaatgttgagtcaacttcgaaattccaagttacattgtaatcctctgtgacattcattccataacttctcgcagtt |
4653674 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
| ||| |||||||||||||| ||||||| ||||| ||||||||| |||||| ||||||| || || || ||||||||||||| |||||||| || |
|
|
| T |
4653675 |
aggtatacagcttctggtgcgatgtaatttggaattgtattgtttttatagttgagatgat---ttacaaaatcacttgatacacttagtggatattgtt |
4653771 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaac |
297 |
Q |
| |
|
|||| |||||||||||| |||| || |||||||| ||||||| ||| ||||| ||||| ||||||||||||||||||| ||||| |||||||| |
|
|
| T |
4653772 |
tctctaagtaacgaggataatcgttatcccaattacgaaacaaaccagtatctaggtttggtggaacttgattttcaccaacgttgacactataaac |
4653868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 80 - 342
Target Start/End: Original strand, 4672837 - 4673096
Alignment:
| Q |
80 |
attccataacttctggcagtaaagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttg |
179 |
Q |
| |
|
|||||||||||||| ||||| | ||||||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||| | ||| |||||| |
|
|
| T |
4672837 |
attccataacttcttgcagttacgtaaacagcttctggtgcagtgtaatttggaatggtattgtttaaaaagttgagatgatgcat---atactcacttg |
4672933 |
T |
|
| Q |
180 |
atacactatttggatattctttctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcacc |
279 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| | ||||||||||||||||||| ||||||||||| ||||| |||| ||| |||||||| ||||||| |
|
|
| T |
4672934 |
atacactaagtggatattgtttctccaagtaaccatgaaaatcattgtcccaattacgaaacataccagtatcgtcacccggtggaacttgactttcacc |
4673033 |
T |
|
| Q |
280 |
aacattgactctataaaccatctccaaatctttatcatttcgaatttcgtattcgctgttgtc |
342 |
Q |
| |
|
||| ||||||||||||||||| |||||| |||| || || |||||| |||||| ||||||| |
|
|
| T |
4673034 |
aacgttgactctataaaccatttccaaagctttttcgttatgaatttggtattccgtgttgtc |
4673096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 4697230 - 4696931
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||| ||||||||||||||||| ||| | ||||||||| |||||||||||||||||| |||||||||| |||||| |||| |||||| ||||| |
|
|
| T |
4697230 |
aaaatgcaaccttaccatataagtaaaaccaacatcaacttcgaaattccaagttacattgaaatcctctgtctcatccaatccacgacttcttgcagtt |
4697131 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||| ||||||||||||||| ||||||| ||||||| |||||| |||||| ||||||| | | || ||||||||| || | |||||||| || |
|
|
| T |
4697130 |
aagtacacagcttctggtgcagtgtaattttgaatggtgttgttttcatagttaagatgat---gtttaaaatcacttgatatgctttgtggatattgtt |
4697034 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||||||| ||||| | ||||| |||||||||| |||| |||||||||||||||||| | |
|
|
| T |
4697033 |
tctccaagtaacgaggaaaatcattgtcccagttacgaaacataccagtatcttggtttggtggaacttgattgccacccacattgactctataaaccgt |
4696934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 87 - 331
Target Start/End: Original strand, 4643848 - 4644089
Alignment:
| Q |
87 |
aacttctggcagtaaagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacact |
186 |
Q |
| |
|
||||||| ||||| || |||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||| | ||||| || ||||||| || |
|
|
| T |
4643848 |
aacttcttgcagttaaataaacagcttctggtgcagtgtaatttggaatggcattttttaaatagtttagatgatg---ttcataatcatttgatacgct |
4643944 |
T |
|
| Q |
187 |
atttggatattctttctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattg |
286 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| | ||||| |||||||| || |||||| ||| |
|
|
| T |
4643945 |
tagcggatattgtttctccaagtaacgaggataatcattgtcccaattacgaaacatacctgtatcttggtttggtggaacttgaattcgaccaacgttg |
4644044 |
T |
|
| Q |
287 |
actctataaaccatctccaaatctttatcatttcgaatttcgtat |
331 |
Q |
| |
|
||||||||||||||||||||| |||| ||||| |||||| |||| |
|
|
| T |
4644045 |
actctataaaccatctccaaagctttgtcattaagaatttggtat |
4644089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4672731 - 4672790
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacatt |
60 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4672731 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacctcaaaattccaagttacatt |
4672790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4643726 - 4643791
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatc |
66 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
4643726 |
aaaatgtaaccttaccatataagtaaaaccagaatcaacctcaaaattccaagttacattgaaatc |
4643791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 4647584 - 4647625
Alignment:
| Q |
6 |
gtaaccttaccatataagtgaaagaagaatcaacttcaaaat |
47 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
4647584 |
gtaaccttaccatataagtaaaaccagaatcaacttcaaaat |
4647625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 18925782 - 18925483
Alignment:
| Q |
1 |
aaaatgtaaccttaccatataagtgaaagaagaatcaacttcaaaattccaagttacattgtaatcctctgtggcatccattccataacttctggcagta |
100 |
Q |
| |
|
|||||| || ||||||| |||||| || | |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| ||||| |
|
|
| T |
18925782 |
aaaatgcaatcttaccaaataagtaaaggcagaatcaacttcaaaattccaagttacattataatcctttgtcgcatccattccataacttcttgcagtt |
18925683 |
T |
|
| Q |
101 |
aagtaaacagcttctggtgcactgtaattgggaatggtattgtttaaatagtttagatgatcacttccataaacacttgatacactatttggatattctt |
200 |
Q |
| |
|
||||| ||| |||||||||| |||| || |||||||||||||||| |||||| |||| || | | || || |||||||||| |||||||| || |
|
|
| T |
18925682 |
aagtatacaacttctggtgccgtgtagtttggaatggtattgtttatatagttgagattat---gtgtaaaatcatttgatacacttagtggatattgtt |
18925586 |
T |
|
| Q |
201 |
tctccaagtaacgaggaaaatcattgtcccaattgcgaaacatacctgtatcatcacttggttgaacttgattttcaccaacattgactctataaaccat |
300 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |||||||||||||| |||| |||| || |||||||||| |||||||| |||||||||||||| | |
|
|
| T |
18925585 |
tctccaagtaacgaggaaaatcgttgtcccaataacgaaacatacctgtgtcattacttcgtggaacttgattatcaccaacgctgactctataaaccgt |
18925486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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