View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16043_low_3 (Length: 299)
Name: NF16043_low_3
Description: NF16043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16043_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 15 - 283
Target Start/End: Complemental strand, 26578537 - 26578270
Alignment:
| Q |
15 |
tctcacaaacctttatgactcactgtattaatccatccatatttaaacaaatttttctttatatgtataaagttaattattaaaatgtacaaactatgtg |
114 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
26578537 |
tctcacaaacctttatgactcactgtattaatccatccatatttaaacaaatttttctttatatatataaagttaattattaaaatgtacaaactatgtg |
26578438 |
T |
|
| Q |
115 |
aacatttatttccatttcaaatttgtctataatactatgannnnnnnnnaatgattgtatataatgaaatgtaacagatggagatgagaatttcatgtcc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26578437 |
aacatttatttccatttcaaatttgtctataatactatga-ttttttttaatgattatatataatgaaatgtaacagatggagatgagaatttcatgtcc |
26578339 |
T |
|
| Q |
215 |
ctaacacaacctcatgatcaaaataagaactataatgcatctctagatcatgatattggctacacttcc |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
26578338 |
ctaacacaacctcatgatcaaaataagaactataatgcatctctagaacatgatattggctacacttcc |
26578270 |
T |
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