View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16047_low_13 (Length: 327)
Name: NF16047_low_13
Description: NF16047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16047_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 9 - 311
Target Start/End: Original strand, 48330451 - 48330753
Alignment:
| Q |
9 |
acatcatcatggagttcaaatatagtcactatttcccaccatctcatgtcaaactgttcatctgtccaagacttaaaaatgcaattcttaaactttggca |
108 |
Q |
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| T |
48330451 |
acatcatcatggagttcaaatatagtcactatttcccaccatctcatgtcaaactgttcatctgtccaagacttaaaaatgcaattcttaaactttggca |
48330550 |
T |
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| Q |
109 |
agaagttcttatactgtttgatcacaaaagacagattttcaggtatcttttccattatgtgcgaaagagaaaagcaatgacgtacacttgggaagacttc |
208 |
Q |
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| T |
48330551 |
agaagttcttatactgtttgatcacaaaagacagattttcaggtatcttttccattatgtgcgaaagagaaaagcaatgacgtacacttgggaagacttc |
48330650 |
T |
|
| Q |
209 |
ttcaattgcttccttcaaggctttgtcttgatcagtgactataactttgggagcttgccctcccatcgctctaagccatgtcttcagtaaccaaacaaaa |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48330651 |
ttcaattgcttccttcaaggctttgtcttgatcagtgactataactttgggagcttgccctcccatcgctctaagccatgtcttcagtaaccaaacaaaa |
48330750 |
T |
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| Q |
309 |
gtt |
311 |
Q |
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||| |
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| T |
48330751 |
gtt |
48330753 |
T |
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