View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16047_low_16 (Length: 266)

Name: NF16047_low_16
Description: NF16047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16047_low_16
NF16047_low_16
[»] chr6 (14 HSPs)
chr6 (5-247)||(33271594-33271836)
chr6 (59-250)||(33262422-33262616)
chr6 (59-250)||(31562836-31563036)
chr6 (61-250)||(33057374-33057554)
chr6 (59-250)||(33304280-33304474)
chr6 (56-250)||(33398868-33399047)
chr6 (56-250)||(33644555-33644752)
chr6 (60-250)||(28870188-28870381)
chr6 (62-250)||(33409774-33409959)
chr6 (60-236)||(9166571-9166741)
chr6 (60-250)||(33387950-33388143)
chr6 (65-151)||(33285501-33285581)
chr6 (102-152)||(33358799-33358849)
chr6 (184-242)||(33285398-33285456)
[»] chr2 (1 HSPs)
chr2 (59-250)||(17440898-17441080)
[»] scaffold1408 (1 HSPs)
scaffold1408 (62-250)||(440-631)
[»] scaffold0428 (1 HSPs)
scaffold0428 (62-250)||(6186-6377)
[»] chr4 (9 HSPs)
chr4 (69-237)||(31148106-31148268)
chr4 (62-162)||(31479029-31479123)
chr4 (195-247)||(31472707-31472759)
chr4 (101-169)||(31504247-31504315)
chr4 (62-148)||(31157133-31157213)
chr4 (184-250)||(31499201-31499267)
chr4 (58-152)||(31472564-31472655)
chr4 (201-250)||(31157019-31157068)
chr4 (195-242)||(31479165-31479212)
[»] chr7 (1 HSPs)
chr7 (72-152)||(6785403-6785483)


Alignment Details
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 33271836 - 33271594
Alignment:
Q  5 agagaagaataatactttcataggtttgtatgactttggcattgttagaaagattacaggattggtcattttcaactgtccaaaattggctgactgtgag 104  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33271836 agagaacaataatactttcataggtttgtatgactttggcattgttagaaagattacaggattggtcattttcaactgtccaaaattggctgactgtgag 33271737  T
Q  105 agggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaaacccgcaatcttatttgaatgagtttcatattataactccaggaa 204  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33271736 agggaacgttgcagtagcttgacattttcatggatgatacaattcattatggcaaacccgcaatcttatttgaatgagtttcatattataactccaggaa 33271637  T
Q  205 gtgaaataccaagttggatcaacaatcagagcatgggtgattc 247  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33271636 gtgaaataccaagttggatcaacaatcagagcatgggtgattc 33271594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 59 - 250
Target Start/End: Complemental strand, 33262616 - 33262422
Alignment:
Q  59 tacaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggca 158  Q
    |||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||| || ||||||||||   |||    
T  33262616 tacaggattggtcattttcaactgtccaaaattgg------gtgagagggaacgttgcagtagcatgacattttcatggacgacacaattcattcaagca 33262523  T
Q  159 aacccgcaatc---------ttatttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaa 249  Q
     |||  |||||         ||||||| |||||||||| ||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33262522 taccaacaatcctaccctacttatttggatgagtttcaaattgttagtccaggaaatgaaataccaagttggatcaacaatcagagcatgggtgattcaa 33262423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 250
Target Start/End: Original strand, 31562836 - 31563036
Alignment:
Q  59 tacaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggca 158  Q
    |||||||||||||||||| |||||||| |||||||||||  |||||||||| | |||||| |||||||||||||||||||||  ||||||||||| ||||    
T  31562836 tacaggattggtcatttttaactgtccgaaattggctgagagtgagagggagcattgcaggagcatgacattttcatggatggcacaattcattaaggca 31562935  T
Q  159 aacccgcaat---------cttatttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaa 249  Q
     | || || |         | |||||| |||||||||||||| |   |||||||||||||||||| | ||||||||||||||| ||||||||||||||||    
T  31562936 tatccacactcctaccctgcctatttggatgagtttcatattgttgttccaggaagtgaaataccgaattggatcaacaatcatagcatgggtgattcaa 31563035  T
Q  250 t 250  Q
    |    
T  31563036 t 31563036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 250
Target Start/End: Complemental strand, 33057554 - 33057374
Alignment:
Q  61 caggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaaa 160  Q
    |||||||| ||||||||||||||||||||||||      |||||||||||| |||||| ||||||||| ||| |||||||| ||||||||||| ||||||    
T  33057554 caggattgctcattttcaactgtccaaaattgg------gtgagagggaacattgcaggagcatgacacttttatggatgaaacaattcattaaggcaaa 33057461  T
Q  161 cccgcaatcttatttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    ||| |  || | ||    |||| |||| ||  | | ||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  33057460 cccacgttcctcttc---tgagattcaaatagttaatccaggaagtgaaataccaagttggatcaacaatcagaggatgggttattcaat 33057374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 250
Target Start/End: Complemental strand, 33304474 - 33304280
Alignment:
Q  59 tacaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggca 158  Q
    |||||||||| ||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||| ||| ||||||||||  ||||    
T  33304474 tacaggattgttcattttcaactgtccaaaattgg------gtgagagggaacgttgcagtagcatgacattttcatggttgacacaattcattgaggca 33304381  T
Q  159 aacccgcaatctta----------tttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattca 248  Q
    ||| | ||||| ||          ||||| || | |||| ||| | |||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||    
T  33304380 aactcacaatcctaccctacgtcctttgattg-gattcaaattgttactccaggaaatgaaataccaatttggatcaacaataagagcgtgggtgattca 33304282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 250
Target Start/End: Complemental strand, 33399047 - 33398868
Alignment:
Q  56 gattacaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatg 155  Q
    |||| ||||||||||||||||||||||| |||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33399047 gatttcaggattggtcattttcaactgttcaaaattgg------gtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattctg 33398954  T
Q  156 gcaaacccgcaatcttatttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    || || || |||||             | ||| ||| | | ||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  33398953 gccaatccacaatc---------cacctctcaaattgttattccaggaagtgaaataccaagttggatcaacaatcagtgtgtgggtgattcaat 33398868  T

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Target: chr6; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 56 - 250
Target Start/End: Original strand, 33644555 - 33644752
Alignment:
Q  56 gattacaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatg 155  Q
    |||| ||||||||||||||||||||||| |||||||||      ||||||||||||||||||| |||||||||||||||||||||||||||||||||  |    
T  33644555 gatttcaggattggtcattttcaactgttcaaaattgg------gtgagagggaacgttgcaggagcatgacattttcatggatgatacaattcattcag 33644648  T
Q  156 gcaaacccgcaatctta----------tttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgat 245  Q
    |||||||  ||||| ||          |||| ||  |  ||| ||| |||||||||||||||||||||||||||||||||||||||| ||  ||||| ||    
T  33644649 gcaaacctacaatcctacccaacctactttg-ataggactcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcaaagtgtgggttat 33644747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 250
Target Start/End: Original strand, 28870188 - 28870381
Alignment:
Q  60 acaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaa 159  Q
    ||||| ||| ||||||||||||||||||| || |      ||||||||||||||||  |||||||| ||||||||||||||| ||||||||||  ||||     
T  28870188 acaggtttgatcattttcaactgtccaaatttag------gtgagagggaacgttgttgtagcatggcattttcatggatgaaacaattcattcgggcat 28870281  T
Q  160 acccgcaatctta---------tttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    |||  ||||| ||         |||| ||| |||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  28870282 accgacaatcctaccttgtctatttggatgcgtttaatattgttactccaggaagtgaaataccaagttggattaacaatcagagcatgggtggttcaat 28870381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 250
Target Start/End: Complemental strand, 33409959 - 33409774
Alignment:
Q  62 aggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaaac 161  Q
    ||||||| |||||||||||||||||||||||| |||      ||||||||||||||||||||| ||| |||||||||||  ||| ||||||  |||||||    
T  33409959 aggattgttcattttcaactgtccaaaattggttga------gagggaacgttgcagtagcatcacaatttcatggatggcacatttcattcaggcaaac 33409866  T
Q  162 ccgcaatcttat---ttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    |  ||| |  |    |||   | | |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  33409865 caacaacccaacaaattgtcggcgcttcaaattgtaactccaggaagtgaaataccaagttggatcaacaatcagagcgtgggtgcttcaat 33409774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 9166741 - 9166571
Alignment:
Q  60 acaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaa 159  Q
    ||||||||||||||||||||||||||| |||||       |||| | ||||| |||||||||||||||||||||||||||||| ||||| |||  |||||    
T  9166741 acaggattggtcattttcaactgtccagaattga------gtgataaggaacattgcagtagcatgacattttcatggatgatgcaatttattcaggcaa 9166648  T
Q  160 acccgcaatcttatttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagc 236  Q
    |||| | |||  | ||  ||  | |||| ||| | || ||||||| |||||||||||||||||||||||||| ||||    
T  9166647 acccaccatcccactttgataggattcaaattgttacgccaggaattgaaataccaagttggatcaacaatcggagc 9166571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 250
Target Start/End: Complemental strand, 33388143 - 33387950
Alignment:
Q  60 acaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaa 159  Q
    ||||||||| || ||||||||||||||||| |||      |||| |||||  |||||||||||||||||||||||||||||| |||||| |||| |||||    
T  33388143 acaggattgatcgttttcaactgtccaaaactgg------gtgatagggagtgttgcagtagcatgacattttcatggatgacacaatttattaaggcaa 33388050  T
Q  160 acccgcaatctta---------tttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    |||  ||| | ||         |||  ||  | |||| ||| | ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33388049 accgacaaacctaccctgcctattttgatacgattcaaattgttactacaggaagtgaaataccgagttggatcaacaatcagagcatgggtgattcaat 33387950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 33285581 - 33285501
Alignment:
Q  65 attggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcat 151  Q
    ||||||||||||||||||||||||||| |      |||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  33285581 attggtcattttcaactgtccaaaattag------gtgaaagggaacgttgcagtagcatggcattttcatggatgatacaattcat 33285501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 33358849 - 33358799
Alignment:
Q  102 gagagggaacgttgcagtagcatgacattttcatggatgatacaattcatt 152  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  33358849 gagagggaacgttgcagtagcatgacactttcatggatgaaacaattcatt 33358799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 33285456 - 33285398
Alignment:
Q  184 ttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggt 242  Q
    |||||||| | ||||||||||||||||||||||||||||| || ||||||||| |||||    
T  33285456 ttcatattgttactccaggaagtgaaataccaagttggattaataatcagagcgtgggt 33285398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 250
Target Start/End: Original strand, 17440898 - 17441080
Alignment:
Q  59 tacaggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggca 158  Q
    |||||||||| |||| |||||||||||||||||||      ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  17440898 tacaggattgttcatcttcaactgtccaaaattgg------gtgagagggaatgttacagtagcatgacattttcatggatgatgcaattcattaaggca 17440991  T
Q  159 aacccgcaatcttatttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    |||||    |  |||||||||  | |||||||| | | ||||||||| |||||||||||||||||||||||| ||||| |||||||||||||    
T  17440992 aaccc---tttctatttgaataggattcatattgttagtccaggaagcgaaataccaagttggatcaacaataagagcgtgggtgattcaat 17441080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1408 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1408
Description:

Target: scaffold1408; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 62 - 250
Target Start/End: Complemental strand, 631 - 440
Alignment:
Q  62 aggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaaac 161  Q
    ||||||||||||||||||||||||||||||||      ||||||||||| |||| |||||||| |||||||||||||||| ||||||||||  |||||||    
T  631 aggattggtcattttcaactgtccaaaattgg------gtgagagggaatgttgtagtagcataacattttcatggatgaaacaattcattcaggcaaac 538  T
Q  162 ccgcaatctta---------tttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    |  ||||| ||         |||| ||||| |||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  537 caacaatcctacggtccgtatttgtatgagcttcaaattgttactccaggaagtgaaataccaagctggatcaacaatcagagcatgggtggttcaat 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 62 - 250
Target Start/End: Complemental strand, 6377 - 6186
Alignment:
Q  62 aggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaaac 161  Q
    ||||||||||||||||||||||||||||||||      ||||||||||| |||| |||||||| |||||||||||||||| ||||||||||  |||||||    
T  6377 aggattggtcattttcaactgtccaaaattgg------gtgagagggaatgttgtagtagcataacattttcatggatgaaacaattcattcaggcaaac 6284  T
Q  162 ccgcaatctta---------tttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    |  ||||| ||         |||| ||||| |||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  6283 caacaatcctacggtccgtatttgtatgagcttcaaattgttactccaggaagtgaaataccaagctggatcaacaatcagagcatgggtggttcaat 6186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 31148268 - 31148106
Alignment:
Q  69 gtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaaacccgcaat 168  Q
    ||||||||||||||||| |||||||      ||||||||||| |||| | |||||||| ||||||||||||||||||| |||||  ||| ||||| ||||    
T  31148268 gtcattttcaactgtcctaaattgg------gtgagagggaatgttggaatagcatgatattttcatggatgatacaactcattcgggcgaacccacaat 31148175  T
Q  169 ctt-atttgaatgagtttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagca 237  Q
    | | || ||| || | |||| ||| | ||||| ||||||||||||||||||||| |||||||||||||||    
T  31148174 cctcatctga-tgtgattcaaattgttactccgggaagtgaaataccaagttggttcaacaatcagagca 31148106  T

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Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 31479029 - 31479123
Alignment:
Q  62 aggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaaac 161  Q
    ||||||| |||||||||||||||| |||||||      |||| | ||||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  31479029 aggattgttcattttcaactgtcctaaattgg------gtgaaacggaacgttggagtagcatgacattttcatggatgatacaattcattcaggcaaac 31479122  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 31472707 - 31472759
Alignment:
Q  195 actccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattc 247  Q
    ||||||||||||||||||||||||||| |||||||||||| || |||||||||    
T  31472707 actccaggaagtgaaataccaagttggttcaacaatcagaacaagggtgattc 31472759  T

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Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 31504247 - 31504315
Alignment:
Q  101 tgagagggaacgttgcagtagcatgacattttcatggatgatacaattcattatggcaaacccgcaatc 169  Q
    |||||||||| | | || ||| ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  31504247 tgagagggaatgctacattagaatgacattttcatggatgatacaattcattaaggcaaacccacaatc 31504315  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 31157213 - 31157133
Alignment:
Q  62 aggattggtcattttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaatt 148  Q
    |||||||||||||||||||||||| |||||||      ||||||| |||  ||||| ||||||| ||||||||||||||||||||||    
T  31157213 aggattggtcattttcaactgtcctaaattgg------gtgagagtgaagattgcaatagcatggcattttcatggatgatacaatt 31157133  T

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Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 31499201 - 31499267
Alignment:
Q  184 ttcatattataactccaggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    |||||||| | |||||||||||||||||| |||||||| | || |||||||||| ||||||||||||    
T  31499201 ttcatattgttactccaggaagtgaaatatcaagttggtttaagaatcagagcaagggtgattcaat 31499267  T

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Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 31472564 - 31472655
Alignment:
Q  58 ttacaggattggtcattttcaactgtccaaaattggctgactgtgagagggaac---gttgcagtagcatgacattttcatggatgatacaattcatt 152  Q
    ||||||||||| |||||||||||||||| || ||||      ||||||||||||   |||||| || ||||||||||||||||||||||||| |||||    
T  31472564 ttacaggattgctcattttcaactgtcctaatttgg------gtgagagggaacattgttgcactaacatgacattttcatggatgatacaactcatt 31472655  T

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Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 31157068 - 31157019
Alignment:
Q  201 ggaagtgaaataccaagttggatcaacaatcagagcatgggtgattcaat 250  Q
    |||||||||||||||| |||| ||||||||||||||  ||||||||||||    
T  31157068 ggaagtgaaataccaatttggttcaacaatcagagcgagggtgattcaat 31157019  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 31479165 - 31479212
Alignment:
Q  195 actccaggaagtgaaataccaagttggatcaacaatcagagcatgggt 242  Q
    |||||||| |||||||| ||||||||| ||||||||||||||| ||||    
T  31479165 actccaggtagtgaaatgccaagttggttcaacaatcagagcaagggt 31479212  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 6785403 - 6785483
Alignment:
Q  72 attttcaactgtccaaaattggctgactgtgagagggaacgttgcagtagcatgacattttcatggatgatacaattcatt 152  Q
    ||||||||||||||  |||||  |||  |||||| |||||||||||||  ||| || ||||||||||||| ||||||||||    
T  6785403 attttcaactgtcctgaattgcatgagggtgagacggaacgttgcagtgacataactttttcatggatgaaacaattcatt 6785483  T

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