View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16051_low_17 (Length: 250)
Name: NF16051_low_17
Description: NF16051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16051_low_17 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 42452154 - 42452394
Alignment:
| Q |
10 |
agatgaatgtaagagacgatataggggagagcttatgatgtgttgttggataggaaatcaagctgatgaagcatttcatgaagcttcgcatttacaatta |
109 |
Q |
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| T |
42452154 |
agatgaatgtaagagacgatataggggagagcttatgatgtgttgttggataggaaatcaagctgatgaagcatttcatgaagcttcgcatttacaatta |
42452253 |
T |
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| Q |
110 |
ggtcatgcgctaattagttctcgtcatactcttaatacttgctcaagggtatatatcatgcctagggtttggtgtcttagacttaatttgcttcaagttg |
209 |
Q |
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| T |
42452254 |
ggtcatgtgctaattagtgctcgtcatactcttaatacttgctcaagggtatatattatgcctagggtttggtgtcttagacttaatttgcttcaagttg |
42452353 |
T |
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| Q |
210 |
agggacttatacttgaaattgatgacccatctgaaagctct |
250 |
Q |
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| T |
42452354 |
agggacttatacttgaaattgatgacccatctgaaagctct |
42452394 |
T |
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