View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16052_low_17 (Length: 282)
Name: NF16052_low_17
Description: NF16052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16052_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 15 - 265
Target Start/End: Complemental strand, 32886895 - 32886645
Alignment:
| Q |
15 |
tatagaagaatcctgaccatttgatcagcatagaacatgcaccataattcactactggtccatggccagtgtgaatattttaaggtaaaatatgttctac |
114 |
Q |
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| T |
32886895 |
tatagaagaatcctgaccatttgatcagcatagaacatgcaccataattcactactggtccatggccagtgtgaatattttaaggtaaaatatgttctac |
32886796 |
T |
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| Q |
115 |
cgtggtgtgtactatgcattgggtaaaagtgtgacactgcctaatgcctattcatacattaataattgggtgggaaataggacttgtttgattgattatt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32886795 |
cgtggtgtgtactatgcattgggtaaaagtgtgacactgcctaatgcctattcatacattaataattgggtgggaaataggacttgtttgattgattatt |
32886696 |
T |
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| Q |
215 |
cctagaagtccccaactgtttttgacttaaatgcaccattttttctctaac |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32886695 |
cctagaagtccccaactgtttttgacttaaatgcaccattttttctctaac |
32886645 |
T |
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