View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16052_low_18 (Length: 263)
Name: NF16052_low_18
Description: NF16052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16052_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 38057036 - 38056797
Alignment:
| Q |
9 |
aatatgaatgaatgaatgtcgtcgtcttcgtcttcttcacgttccaaatcaaatgctgctaattctgaaatgaccaaagctaataacaacatttccctca |
108 |
Q |
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| T |
38057036 |
aatatgaatgaatgaatgtcgtcgtcttcgtcttcttcacgttccaaatcaaatgctgctaattctgaaatgaccaaagctaataacaacatttccctca |
38056937 |
T |
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| Q |
109 |
tcccaatccaccactcctacaacactacaaacacctcgcctgacaatagtgtcaagaatgagaaaaagaaaaaggttcttttgctatatacactttcttt |
208 |
Q |
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| T |
38056936 |
tcccaatccaccactcctacaacactacaaacacctcgcctgacaatagtgtcaagaatgagaaaaagaaaaaggttcttttgctatatacactttcttt |
38056837 |
T |
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| Q |
209 |
ctttctttgtaattttcctcatgcattgcattgttattga |
248 |
Q |
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| T |
38056836 |
ctttctttgtaattttcctcatgcattgcattgttattga |
38056797 |
T |
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