View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16052_low_7 (Length: 405)

Name: NF16052_low_7
Description: NF16052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16052_low_7
NF16052_low_7
[»] chr2 (36 HSPs)
chr2 (17-186)||(16379062-16379231)
chr2 (17-174)||(16379518-16379675)
chr2 (24-171)||(15639866-15640013)
chr2 (17-162)||(24818451-24818595)
chr2 (22-162)||(25337873-25338013)
chr2 (17-171)||(1912649-1912803)
chr2 (17-171)||(25433923-25434077)
chr2 (22-139)||(15620028-15620145)
chr2 (24-162)||(32377592-32377730)
chr2 (24-162)||(32377783-32377921)
chr2 (22-163)||(33771131-33771272)
chr2 (22-162)||(33175088-33175226)
chr2 (17-162)||(30966359-30966504)
chr2 (17-162)||(30966815-30966960)
chr2 (22-171)||(1707171-1707320)
chr2 (17-162)||(5399693-5399838)
chr2 (22-146)||(29259512-29259636)
chr2 (17-139)||(8256651-8256773)
chr2 (17-171)||(33174628-33174781)
chr2 (102-187)||(20502174-20502259)
chr2 (22-146)||(27882818-27882942)
chr2 (17-162)||(8181238-8181379)
chr2 (17-124)||(41754414-41754521)
chr2 (22-162)||(30961759-30961899)
chr2 (22-157)||(30963601-30963736)
chr2 (22-80)||(38898870-38898928)
chr2 (22-146)||(30963155-30963279)
chr2 (17-91)||(11388312-11388386)
chr2 (86-162)||(11389677-11389753)
chr2 (86-162)||(11406338-11406414)
chr2 (85-157)||(36924362-36924434)
chr2 (17-91)||(11394658-11394732)
chr2 (116-162)||(29804871-29804917)
chr2 (21-162)||(13191103-13191244)
chr2 (75-160)||(37552748-37552833)
chr2 (17-54)||(29804807-29804844)
[»] chr4 (53 HSPs)
chr4 (17-171)||(23943103-23943257)
chr4 (17-171)||(21067407-21067561)
chr4 (17-171)||(44470736-44470890)
chr4 (17-155)||(1645626-1645764)
chr4 (17-171)||(44471186-44471340)
chr4 (22-155)||(3169336-3169469)
chr4 (17-162)||(7678492-7678637)
chr4 (17-162)||(35871752-35871897)
chr4 (17-163)||(49998761-49998907)
chr4 (17-174)||(23942647-23942804)
chr4 (17-162)||(50398408-50398553)
chr4 (17-171)||(21067856-21068010)
chr4 (22-162)||(24629306-24629443)
chr4 (17-124)||(12691907-12692014)
chr4 (17-156)||(14351920-14352059)
chr4 (22-162)||(4127288-4127428)
chr4 (17-152)||(9423738-9423873)
chr4 (20-149)||(27578169-27578298)
chr4 (17-162)||(50398864-50399008)
chr4 (22-162)||(51331153-51331291)
chr4 (16-146)||(4127775-4127905)
chr4 (17-127)||(50814730-50814840)
chr4 (22-163)||(23350152-23350293)
chr4 (85-171)||(7381460-7381546)
chr4 (25-155)||(8467690-8467815)
chr4 (17-144)||(13613786-13613913)
chr4 (22-157)||(14571563-14571698)
chr4 (22-171)||(53854708-53854857)
chr4 (87-171)||(4414248-4414332)
chr4 (22-158)||(27578783-27578919)
chr4 (71-162)||(15268043-15268134)
chr4 (24-162)||(13266218-13266356)
chr4 (22-162)||(14572024-14572161)
chr4 (22-162)||(27578327-27578467)
chr4 (17-76)||(29628624-29628683)
chr4 (87-162)||(35477855-35477930)
chr4 (56-162)||(31817008-31817114)
chr4 (109-171)||(53995991-53996053)
chr4 (66-139)||(40607105-40607178)
chr4 (17-65)||(53996082-53996130)
chr4 (22-93)||(11828424-11828495)
chr4 (22-80)||(24628929-24628987)
chr4 (42-100)||(50399273-50399331)
chr4 (116-157)||(13265860-13265901)
chr4 (17-85)||(21220278-21220346)
chr4 (22-114)||(31817770-31817862)
chr4 (122-162)||(50399334-50399374)
chr4 (17-155)||(27026627-27026765)
chr4 (17-53)||(15306070-15306106)
chr4 (17-93)||(17029455-17029531)
chr4 (22-131)||(20306063-20306174)
chr4 (106-162)||(33294762-33294818)
chr4 (106-162)||(52048547-52048603)
[»] scaffold0047 (2 HSPs)
scaffold0047 (9-171)||(18002-18164)
scaffold0047 (22-162)||(17474-17614)
[»] chr8 (40 HSPs)
chr8 (17-171)||(8080209-8080363)
chr8 (17-186)||(2044183-2044352)
chr8 (43-162)||(32292092-32292211)
chr8 (17-162)||(10844491-10844636)
chr8 (17-186)||(41913095-41913264)
chr8 (17-147)||(32292522-32292652)
chr8 (17-162)||(17103206-17103352)
chr8 (17-162)||(22548425-22548570)
chr8 (17-162)||(27022215-27022359)
chr8 (22-162)||(12100821-12100960)
chr8 (22-171)||(27926029-27926177)
chr8 (17-162)||(31283528-31283672)
chr8 (22-162)||(41658981-41659121)
chr8 (17-156)||(34308817-34308956)
chr8 (17-162)||(22548871-22549016)
chr8 (17-162)||(25147661-25147805)
chr8 (17-162)||(28453463-28453608)
chr8 (17-162)||(22026504-22026650)
chr8 (17-162)||(12827130-12827275)
chr8 (17-162)||(25148092-25148236)
chr8 (22-171)||(30527349-30527498)
chr8 (17-162)||(34308355-34308500)
chr8 (22-162)||(21315986-21316125)
chr8 (17-139)||(25307889-25308011)
chr8 (17-139)||(33852157-33852279)
chr8 (17-171)||(15818883-15819036)
chr8 (72-171)||(6463410-6463510)
chr8 (17-145)||(10729748-10729876)
chr8 (17-162)||(27819124-27819267)
chr8 (17-76)||(6464872-6464931)
chr8 (62-139)||(22705345-22705422)
chr8 (17-161)||(29971304-29971446)
chr8 (110-186)||(22840400-22840477)
chr8 (17-80)||(22840488-22840550)
chr8 (105-162)||(9251098-9251155)
chr8 (17-57)||(25144897-25144937)
chr8 (22-61)||(15567533-15567572)
chr8 (102-157)||(29117446-29117501)
chr8 (21-90)||(1297136-1297205)
chr8 (102-171)||(34688046-34688115)
[»] chr1 (40 HSPs)
chr1 (17-171)||(43056932-43057086)
chr1 (17-162)||(20054412-20054557)
chr1 (17-162)||(20054868-20055013)
chr1 (17-162)||(20055324-20055469)
chr1 (17-162)||(20055780-20055925)
chr1 (17-162)||(20056236-20056381)
chr1 (17-162)||(20057139-20057284)
chr1 (17-162)||(20057595-20057740)
chr1 (17-162)||(20845537-20845682)
chr1 (17-162)||(20056692-20056837)
chr1 (22-162)||(46693611-46693751)
chr1 (24-156)||(50002957-50003089)
chr1 (17-171)||(43057390-43057544)
chr1 (17-162)||(38341031-38341176)
chr1 (17-162)||(52250331-52250476)
chr1 (17-162)||(52250668-52250813)
chr1 (17-162)||(52251005-52251150)
chr1 (17-162)||(20053956-20054101)
chr1 (17-162)||(50002583-50002728)
chr1 (17-162)||(16451809-16451954)
chr1 (17-162)||(16460962-16461107)
chr1 (17-171)||(35759475-35759629)
chr1 (17-162)||(20060216-20060361)
chr1 (46-162)||(7547791-7547907)
chr1 (17-161)||(30872824-30872971)
chr1 (17-156)||(2634591-2634730)
chr1 (17-162)||(51372750-51372895)
chr1 (66-156)||(31823001-31823091)
chr1 (17-162)||(35009884-35010017)
chr1 (22-93)||(7548221-7548292)
chr1 (17-171)||(12883649-12883801)
chr1 (105-162)||(49996556-49996613)
chr1 (102-162)||(35759940-35760000)
chr1 (104-186)||(39582553-39582635)
chr1 (97-151)||(8278155-8278209)
chr1 (17-69)||(2635049-2635101)
chr1 (17-157)||(23180855-23180995)
chr1 (17-93)||(12728117-12728197)
chr1 (25-107)||(35760845-35760927)
chr1 (17-77)||(50002246-50002306)
[»] chr3 (43 HSPs)
chr3 (17-171)||(37045160-37045311)
chr3 (17-171)||(25238551-25238705)
chr3 (22-171)||(4067227-4067376)
chr3 (17-162)||(13150430-13150575)
chr3 (17-186)||(20884969-20885138)
chr3 (17-174)||(30529812-30529968)
chr3 (17-157)||(28561871-28562010)
chr3 (17-162)||(25230581-25230726)
chr3 (17-162)||(25238168-25238313)
chr3 (25-162)||(39653297-39653434)
chr3 (17-162)||(50347871-50348016)
chr3 (22-162)||(11179910-11180050)
chr3 (22-162)||(14820284-14820424)
chr3 (17-162)||(13149975-13150120)
chr3 (22-162)||(32227097-32227237)
chr3 (22-162)||(32227630-32227770)
chr3 (10-162)||(32386610-32386762)
chr3 (17-171)||(25230115-25230269)
chr3 (17-171)||(25237702-25237856)
chr3 (22-163)||(27187204-27187346)
chr3 (17-146)||(8067405-8067534)
chr3 (22-162)||(14814079-14814219)
chr3 (17-162)||(16811506-16811649)
chr3 (17-162)||(31284152-31284297)
chr3 (17-171)||(2911220-2911363)
chr3 (17-162)||(25248236-25248382)
chr3 (17-171)||(25802415-25802569)
chr3 (22-171)||(7477321-7477470)
chr3 (17-162)||(16811050-16811195)
chr3 (22-171)||(7494011-7494160)
chr3 (95-171)||(25238994-25239070)
chr3 (22-162)||(53150688-53150828)
chr3 (17-80)||(39641062-39641125)
chr3 (95-162)||(41473744-41473811)
chr3 (17-144)||(41474122-41474249)
chr3 (105-171)||(25230964-25231030)
chr3 (9-92)||(41472417-41472500)
chr3 (22-156)||(3899930-3900064)
chr3 (25-162)||(15405679-15405816)
chr3 (22-78)||(25802964-25803020)
chr3 (25-162)||(15388276-15388413)
chr3 (25-162)||(15392643-15392780)
chr3 (74-146)||(18318837-18318909)
[»] chr5 (36 HSPs)
chr5 (17-171)||(1822031-1822185)
chr5 (17-162)||(10927279-10927424)
chr5 (17-162)||(17445331-17445476)
chr5 (17-162)||(2474530-2474675)
chr5 (17-162)||(3886933-3887078)
chr5 (17-146)||(20039367-20039496)
chr5 (22-171)||(29679974-29680123)
chr5 (17-162)||(34371737-34371882)
chr5 (17-162)||(22557094-22557240)
chr5 (24-162)||(42788522-42788660)
chr5 (17-162)||(3886477-3886622)
chr5 (17-156)||(189193-189332)
chr5 (17-162)||(8641911-8642055)
chr5 (22-157)||(27646716-27646851)
chr5 (17-162)||(22556661-22556807)
chr5 (9-158)||(8391202-8391351)
chr5 (17-162)||(15512888-15513033)
chr5 (17-114)||(10926870-10926967)
chr5 (17-162)||(34372193-34372338)
chr5 (17-162)||(2474084-2474219)
chr5 (24-171)||(1880208-1880355)
chr5 (17-114)||(21886070-21886167)
chr5 (52-144)||(187718-187810)
chr5 (17-162)||(2193941-2194074)
chr5 (63-162)||(38063705-38063803)
chr5 (22-158)||(8366596-8366730)
chr5 (22-162)||(30720136-30720276)
chr5 (17-171)||(39147064-39147211)
chr5 (17-171)||(18750063-18750217)
chr5 (17-162)||(20858418-20858562)
chr5 (33-162)||(24182122-24182251)
chr5 (22-162)||(11757157-11757297)
chr5 (116-162)||(21883961-21884007)
chr5 (22-162)||(30684887-30685027)
chr5 (43-144)||(26341169-26341270)
chr5 (22-114)||(30684480-30684572)
[»] chr7 (41 HSPs)
chr7 (17-171)||(29038887-29039041)
chr7 (17-162)||(28495979-28496124)
chr7 (24-171)||(22529102-22529249)
chr7 (17-171)||(42515217-42515371)
chr7 (17-162)||(34405467-34405612)
chr7 (22-162)||(36422382-36422521)
chr7 (17-171)||(2466049-2466202)
chr7 (17-162)||(2941633-2941778)
chr7 (17-162)||(7646354-7646499)
chr7 (17-162)||(7646540-7646685)
chr7 (22-186)||(3305200-3305364)
chr7 (17-162)||(42515669-42515814)
chr7 (17-162)||(9125084-9125229)
chr7 (17-171)||(679941-680095)
chr7 (17-186)||(2611511-2611673)
chr7 (17-162)||(13122380-13122526)
chr7 (17-162)||(13125011-13125157)
chr7 (17-151)||(35474008-35474142)
chr7 (26-162)||(2193390-2193526)
chr7 (22-162)||(2189274-2189414)
chr7 (9-139)||(18833403-18833533)
chr7 (17-156)||(6718957-6719095)
chr7 (17-146)||(43776182-43776311)
chr7 (72-162)||(43233137-43233227)
chr7 (17-162)||(6747482-6747619)
chr7 (17-112)||(2465858-2465953)
chr7 (17-144)||(9623332-9623459)
chr7 (93-171)||(6747943-6748021)
chr7 (17-174)||(26421624-26421781)
chr7 (17-162)||(28495495-28495629)
chr7 (22-153)||(29357341-29357472)
chr7 (85-162)||(36422575-36422652)
chr7 (17-80)||(46425866-46425929)
chr7 (17-158)||(25182486-25182627)
chr7 (17-82)||(35527077-35527142)
chr7 (102-186)||(31743741-31743825)
chr7 (22-139)||(5406486-5406604)
chr7 (105-162)||(26419111-26419168)
chr7 (106-153)||(11372657-11372704)
chr7 (105-162)||(36015345-36015402)
chr7 (102-162)||(7461258-7461318)
[»] scaffold0499 (1 HSPs)
scaffold0499 (17-162)||(1927-2072)
[»] scaffold0243 (1 HSPs)
scaffold0243 (17-162)||(1345-1490)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-162)||(10425-10569)
[»] chr6 (38 HSPs)
chr6 (27-174)||(3652658-3652805)
chr6 (17-163)||(2890714-2890860)
chr6 (17-162)||(20850446-20850591)
chr6 (22-162)||(17027407-17027547)
chr6 (17-162)||(2720439-2720584)
chr6 (17-171)||(2891161-2891314)
chr6 (9-162)||(13492449-13492603)
chr6 (17-171)||(20126049-20126203)
chr6 (17-162)||(9352187-9352332)
chr6 (17-162)||(17730985-17731130)
chr6 (17-162)||(17851043-17851188)
chr6 (17-162)||(7912003-7912148)
chr6 (17-156)||(13492914-13493054)
chr6 (17-171)||(21311640-21311794)
chr6 (17-162)||(11062410-11062555)
chr6 (17-162)||(7912435-7912580)
chr6 (17-162)||(14771595-14771740)
chr6 (22-162)||(13191389-13191529)
chr6 (22-171)||(21312101-21312250)
chr6 (22-163)||(23986192-23986333)
chr6 (17-162)||(28780235-28780380)
chr6 (17-162)||(17851499-17851644)
chr6 (42-162)||(3653052-3653168)
chr6 (17-154)||(20896571-20896709)
chr6 (17-122)||(33774918-33775023)
chr6 (22-162)||(23776571-23776710)
chr6 (104-162)||(27334305-27334363)
chr6 (104-162)||(27395045-27395103)
chr6 (22-139)||(6330812-6330928)
chr6 (92-157)||(11062029-11062094)
chr6 (78-162)||(2681096-2681180)
chr6 (22-174)||(31415953-31416104)
chr6 (80-162)||(28583152-28583234)
chr6 (17-94)||(16520093-16520170)
chr6 (122-171)||(21312468-21312517)
chr6 (116-162)||(6331244-6331290)
chr6 (105-153)||(3884977-3885025)
chr6 (17-185)||(17205463-17205631)
[»] scaffold0322 (1 HSPs)
scaffold0322 (22-162)||(19096-19236)
[»] scaffold0333 (3 HSPs)
scaffold0333 (21-171)||(4690-4839)
scaffold0333 (22-171)||(5151-5299)
scaffold0333 (90-171)||(5320-5402)
[»] scaffold0277 (1 HSPs)
scaffold0277 (17-162)||(14578-14723)
[»] scaffold0022 (4 HSPs)
scaffold0022 (17-162)||(163196-163341)
scaffold0022 (17-162)||(163010-163155)
scaffold0022 (17-162)||(162553-162699)
scaffold0022 (17-162)||(69691-69836)
[»] scaffold0020 (1 HSPs)
scaffold0020 (17-157)||(107344-107484)
[»] scaffold0024 (1 HSPs)
scaffold0024 (17-163)||(105845-105991)
[»] scaffold0168 (1 HSPs)
scaffold0168 (17-162)||(2867-3012)
[»] scaffold0002 (2 HSPs)
scaffold0002 (17-162)||(154882-155027)
scaffold0002 (93-162)||(154503-154572)
[»] scaffold0389 (1 HSPs)
scaffold0389 (17-162)||(13409-13554)
[»] scaffold0040 (1 HSPs)
scaffold0040 (17-162)||(2086-2231)
[»] scaffold1519 (1 HSPs)
scaffold1519 (33-158)||(1581-1706)
[»] scaffold0217 (1 HSPs)
scaffold0217 (29-162)||(447-580)
[»] scaffold0557 (1 HSPs)
scaffold0557 (23-162)||(2236-2366)
[»] scaffold0005 (2 HSPs)
scaffold0005 (22-157)||(245678-245813)
scaffold0005 (22-162)||(245215-245352)
[»] scaffold0012 (1 HSPs)
scaffold0012 (22-99)||(246704-246781)
[»] scaffold0137 (1 HSPs)
scaffold0137 (22-163)||(7072-7212)
[»] scaffold0391 (1 HSPs)
scaffold0391 (22-132)||(14871-14981)
[»] scaffold0036 (2 HSPs)
scaffold0036 (21-162)||(26199-26338)
scaffold0036 (21-162)||(16174-16314)
[»] scaffold0442 (1 HSPs)
scaffold0442 (118-155)||(1-38)
[»] scaffold0065 (1 HSPs)
scaffold0065 (116-162)||(62983-63029)
[»] scaffold0126 (1 HSPs)
scaffold0126 (102-150)||(37201-37249)


Alignment Details
Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 16379062 - 16379231
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  || |||||||| ||||||| ||||||||||||| |    
T  16379062 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatcgggaagtttccgggtaagcgtgcgagtgaggacaa 16379161  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttac 186  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||    
T  16379162 aacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagttgtttggaatgttac 16379231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 16379518 - 16379675
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||||||||||| ||||||||| |||||||||| || ||||||| | |||||| ||||||||||||| |    
T  16379518 attccataagaactccacagttaagcgtgtttgacttggagtaatctttggatgggtgacctaccgggaagtttcactgtaagcgtgcgagtgaggacaa 16379617  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgt 174  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||    
T  16379618 aacacgctgaaaagactcgtgttggtttgtagggtcattcgacaatgcttaaagttgt 16379675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 15639866 - 15640013
Alignment:
Q  24 aagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgc 123  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| || ||||| ||||||||||||| ||||||||    
T  15639866 aagaactccacaattaagcgtgcttgacttggagtagtctttggatgggtgacctactgggaagtttctcgataagcgtgcgagtgaggacaaaacacgc 15639965  T
Q  124 tgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
     ||||||||||||||| ||| ||||||||||||| ||||  |||||||    
T  15639966 agaaaagactcgtgttggttggtagggtcagtcggcaatgcttaaagt 15640013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 24818451 - 24818595
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | ||||||| |||||||||| || |||||||| ||||||| ||||||||||||| |    
T  24818451 attccataagaactccacagttaagcgtgcttgacttggagcaat-tttggatgggtgacctaccgggaagtttcctggtaagcgtgcgagtgaggacaa 24818549  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  24818550 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 24818595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 25338013 - 25337873
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||| ||||||    
T  25338013 ataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacac 25337914  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  25337913 gctgaaaagactcgtgttggtttgtggggtcagtcgacaat 25337873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 1912649 - 1912803
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||||||||||| ||||||||| ||| |||||| || ||||||| |||||||| ||||||||||||| |    
T  1912649 attccataagaactccacagttaagcgtgattgacttggagtactctttggatgggttacctaccgggaagtttctcggtaagcgtgcgagtgaggacaa 1912748  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||| |||||||||||||||| |||||||| |||||||| ||||  |||||||    
T  1912749 aacacgttgaaaagactcgtgttggtttgtagagtcagtcggcaatgcttaaagt 1912803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 25434077 - 25433923
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||| || || |||||| | ||||||| || |||| ||||| |    
T  25434077 attccataagaactccacagttaagcgtgcttgacttggagtggtctttggatgggtgaccaacagggaagttttctggtaagcgtgtgagtaaggacaa 25433978  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||  |||||||    
T  25433977 aacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaatgcttaaagt 25433923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 15620028 - 15620145
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||||| |||| |    
T  15620028 ataagaactccacaattaagcgtgcttgactttgagtagtctttggatgggtgacctactgggaagtttctcggtaagcgtgcgagtgaggacaaaactc 15620127  T
Q  122 gctgaaaagactcgtgtt 139  Q
    ||||||||||||||||||    
T  15620128 gctgaaaagactcgtgtt 15620145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 32377730 - 32377592
Alignment:
Q  24 aagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgc 123  Q
    ||||||||||||||||| | |||||||||||||| | | || |||| |||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||    
T  32377730 aagaactccacagttaagcatgcttgacttggagcaattttgggataggtgacctaccggaaagttttccggtaagcgtgcgagtgaggacaaaacacgc 32377631  T
Q  124 tgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| ||||||||| |||||| |||||||||| ||||    
T  32377630 tgaaaaaactcgtgttggtttgtggggtcagtcggcaat 32377592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 32377921 - 32377783
Alignment:
Q  24 aagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgc 123  Q
    ||||||||||||||||| |||| ||||||||||| | | || |||| ||||| ||||||| |||||| ||||||||| ||||||||||||| ||||||||    
T  32377921 aagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgatctactgggaagttttccggtaagcgtgcgagtgaggacaaaacacgc 32377822  T
Q  124 tgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||| |||||| |||||||||| ||||    
T  32377821 tgaaaagactcgtgttggtttgtggggtcagtcggcaat 32377783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 33771131 - 33771272
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| | |||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  33771131 ataagaactccacagttaagcatgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgcgagtgaggacaaaacac 33771230  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaatt 163  Q
     ||||||||||||||||| |||||| ||||||| || |||||    
T  33771231 actgaaaagactcgtgttggtttgtggggtcagccggcaatt 33771272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 33175088 - 33175226
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||  ||| |||||||||| || || || |||||||||| ||||||||||||| ||||||    
T  33175088 ataagaactccacagttaagcgtg-ttgacttggagtattcttatgatgggtgacctaccgggaaatt-cccggtaagcgtgcgagtgaggacaaaacac 33175185  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  33175186 gctggaaagactcgtgttagtttgtagggtcagtcggcaat 33175226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 30966359 - 30966504
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||| |||||| |||||||||||||||  | | || |||| |||||||||| || ||||||| |||||||| ||||||||||||| |    
T  30966359 attccataagaactccatagttaagcgtgcttgacttggaccaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtgaggacaa 30966458  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| |||||||||||||||| |||||| |||||||||| ||||    
T  30966459 aacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaat 30966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 30966815 - 30966960
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||| |||||||| | | || |||| |||||||||| || ||||||| |||||||| ||||||||||||| |    
T  30966815 attccataagaactccacagttaagcgtgcttaacttggagcaattttgggatgggtgacctaccgggaagtttctcggtaagcgtgcgagtgaggacaa 30966914  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| |||||||||||||||| |||||| | |||||||| ||||    
T  30966915 aacacgttgaaaagactcgtgttggtttgtggagtcagtcggcaat 30966960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 1707171 - 1707320
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||||||||  ||| |||||||| |||||||||||||| ||||||||||  | |||||||||||||||| |||||||||  || ||||||    
T  1707171 ataagaactccacagttaagagtgtttgacttgaagtagtctttggatgggtgacctaccaggaagtttcccggtaagcgtgcgagtgaatacaaaacac 1707270  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||| |||||| ||| |||  ||| |||||||||||| ||||  |||||||    
T  1707271 gctaaaaagattcgcgttgatttatagggtcagtcggcaatgcttaaagt 1707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 5399838 - 5399693
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| || |||||| |||||||||||||||| | | || |||| ||||||||||  | |||||| ||||||||| |||||||||| || |    
T  5399838 attccataagaacttcatagttaagcgtgcttgacttggagaaattttgggatgggtgacctaccaggaagttttccggtaagcgtgcgagtgagaacaa 5399739  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| ||||||| ||||| |||||| |||||||||||||||    
T  5399738 aacacgctggaaagacttgtgttggtttgtggggtcagtcgacaat 5399693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 29259636 - 29259512
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| || |||||| |||||||||||| ||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  29259636 ataagaacttcatagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgcgagtgaggacaaaacac 29259537  T
Q  122 gctgaaaagactcgtgttagtttgt 146  Q
    | |||||||||||||||| ||||||    
T  29259536 gttgaaaagactcgtgttggtttgt 29259512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 8256651 - 8256773
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||| |||| |||||| ||| ||||| ||||||||||||| |    
T  8256651 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgctgggaagttttccgataagcgtgcgagtgaggacaa 8256750  T
Q  117 aacacgctgaaaagactcgtgtt 139  Q
    || ||||||||||||||| ||||    
T  8256751 aatacgctgaaaagactcatgtt 8256773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 33174628 - 33174781
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||  ||| |||||| ||| || || || |||||||||| ||||||| ||||  |    
T  33174628 attccataagaactccgcagttaagcgtgcttgacttggagtagtcttatgatgggtgacataccgggaaatt-cccggtaagcgtgcgagttaggaaaa 33174726  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||| |||  |||||| |||||| ||||||||||||||||||||||  |||||||    
T  33174727 aacatgctagaaagacccgtgtttgtttgtagggtcagtcgacaatgcttaaagt 33174781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 20502174 - 20502259
Alignment:
Q  102 tgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttacg 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  || ||||||||    
T  20502174 tgcgagtgaggacaaaacacgctgaaaagactcgtgttagtttgtagggtcagtcggcaatttttaaagttgtctgggatgttacg 20502259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 27882942 - 27882818
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||||| ||||||||||||  ||||||  |||||||  ||| ||| ||||| ||||||    
T  27882942 ataagaactccacaattaagcgtgtttgacttggagtagtctttggataggtgacctactgagaagtttttcggtaagtgtgcaagtcaggacaaaacac 27882843  T
Q  122 gctgaaaagactcgtgttagtttgt 146  Q
    |||||||||| || |||| ||||||    
T  27882842 gctgaaaagaatcttgttggtttgt 27882818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 8181379 - 8181238
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| |||||||||||||| ||||| |    |||||||||| |||||| ||||||||||||| |||||| ||| ||| | ||| ||||||||| |    
T  8181379 attccataaaaactccacagttaagcgtgcatc---tggagtagtcgttggatgggtgacctactgggaagttttccgataaacgtgcaagtgaggacaa 8181283  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||    
T  8181282 aacacgctgaaaagactcgtgttggtttgca-ggtcagtcgacaat 8181238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 41754414 - 41754521
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| | |||||||| ||||||||||||||||| | ||||||||||||| |    
T  41754414 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggatgacctaccggaaagtttcccggtaaacgtgcgagtgaggacaa 41754513  T
Q  117 aacacgct 124  Q
    ||||||||    
T  41754514 aacacgct 41754521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 30961899 - 30961759
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||| ||| | | || |||| |||||||| ||||  |||||| | | |||| ||||||||||||| ||||||    
T  30961899 ataagaactccacagttaaacgtgcttgacttagagcaattttgggatgggtgaccttctgggtagtttctcagaaagcgtgcgagtgaggacaaaacac 30961800  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
      |||||||||| |||||||||||| |||||| ||| ||||    
T  30961799 agtgaaaagacttgtgttagtttgtggggtcaatcggcaat 30961759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 30963736 - 30963601
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||| |||||||||||||| |||||||||||||| | ||| || |||| |||||||| || | ||||||  ||| || | ||||||||||||| ||||||    
T  30963736 ataataactccacagttaagcgtgcttgacttggcggagttttgggataggtgaccttctaggaagtttgtcggaaaccgtgcgagtgaggacaaaacac 30963637  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
      ||||||||||||| || |||||| || |||||||    
T  30963636 agtgaaaagactcgttttggtttgtgggatcagtcg 30963601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 38898928 - 38898870
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctac 80  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  38898928 ataagaactccacagttaagcgtgcttgacttagagtagtctttggataggtgacctac 38898870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 30963279 - 30963155
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||| || |||||||| |||||||||||||||| | | || ||||  ||||||| || | ||||||| ||| |||| ||||||||||||  ||| ||    
T  30963279 ataagaattcaacagttaagcgtgcttgacttggagcaattttgggatgagtgaccttcttggaagtttctcggaaagcgtgcgagtgaggataaaatac 30963180  T
Q  122 gctgaaaagactcgtgttagtttgt 146  Q
    | |||||||||||||||| ||||||    
T  30963179 gttgaaaagactcgtgttggtttgt 30963155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 11388312 - 11388386
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttc 91  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| ||||||||||| | |||||||    
T  11388312 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactaggaagtttc 11388386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 11389677 - 11389753
Alignment:
Q  86 agtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||| ||||||| |||||||||| |  ||||| |||||||| |||| |||| |||||| |||||||||||||||    
T  11389677 agtttcctggtaagcatgcgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaat 11389753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 11406338 - 11406414
Alignment:
Q  86 agtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||| ||||||| |||||||||| |  ||||| |||||||| |||| |||| |||||| |||||||||||||||    
T  11406338 agtttcctggtaagcatgcgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaat 11406414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 36924434 - 36924362
Alignment:
Q  85 aagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    |||||| | ||| ||| ||||||||||||| |||||||||| ||||||||||||| |||||||| || |||||    
T  36924434 aagttttctggttagcgtgcgagtgaggacaaaacacgctggaaagactcgtgttggtttgtagagttagtcg 36924362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 11394658 - 11394732
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttc 91  Q
    |||| ||||||||| ||||||||| |||||||||||||||| | | || |||| ||||||||||| | |||||||    
T  11394658 attccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactaggaagtttc 11394732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 29804871 - 29804917
Alignment:
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||    
T  29804871 aaacacgctgaaaagactcgtgttggtttgtgggatcagtcgacaat 29804917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 13191103 - 13191244
Alignment:
Q  21 tataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaaca 120  Q
    ||||||||||||| |||||   |||||||||||| || | | ||  ||| |||||||| |||||||||||| |   |||| || || || |||| |||||    
T  13191103 tataagaactccatagttatgtgtgcttgacttgaagaaattttgagataggtgaccttctggaaagtttctcaaaaagcgtgtgaatgcggacaaaaca 13191202  T
Q  121 cgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| |||||||| ||||| |||| | | |||||||||||||    
T  13191203 cgctaaaaagactagtgttggtttatggagtcagtcgacaat 13191244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 37552748 - 37552833
Alignment:
Q  75 acctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgaca 160  Q
    |||| ||| |||||||||||  || | ||||| ||||||  ||||||||| |||| || |||||| ||||||||||||||||||||    
T  37552748 accttctgaaaagtttcccgaaaatcatgcgattgaggaaaaaacacgcttaaaatacccgtgttggtttgtagggtcagtcgaca 37552833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 29804807 - 29804844
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttg 54  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  29804807 attccataagaactccacagttaagcgtgcttgacttg 29804844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 7e-56; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 23943257 - 23943103
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||||||| |    
T  23943257 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgaccaaccgggaagtttcccggtaagcgtgcgagtgaggacaa 23943158  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  23943157 aacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagt 23943103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 21067407 - 21067561
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||||| ||| |||||||| |||| |||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||| |||||||| |||| |    
T  21067407 attctaaaagtactccacaattaagcgtgcttgacttggagtagtctttggaggggtgacctaccggaaagtttctcggtaagcgtgcgagtggggacaa 21067506  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||||  |||||||    
T  21067507 aacacactgaaaagactcgtgttagtttgttgggtcagtccacaatgcttaaagt 21067561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 44470890 - 44470736
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| | |||||||| || |||||||||||||||| ||||||||||||| |    
T  44470890 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggttgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 44470791  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||    
T  44470790 aacacgctggaaagactcgtgttggtttgtagggtcagtcaacaattcttaaagt 44470736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 1645764 - 1645626
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  | |||||||   |||||| ||||||||||||| |    
T  1645764 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaccaggaagtttctttgtaagcgtgcgagtgaggacaa 1645665  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagt 155  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  1645664 aacacgttgaaaagactcgtgttggtttgtagggtcagt 1645626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 44471340 - 44471186
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||| |||||| | | || |||| |||||||||| || || |||||||||||||  |||||||||||| |    
T  44471340 attccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagcgggcgagtgaggacaa 44471241  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||    
T  44471240 aacatgctggaaagactcgtgttggtttgtagggtcagtcgacaattcttaaagt 44471186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 3169336 - 3169469
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||  |||||||||  |||||||||  ||||||| ||||||||||||| ||||||    
T  3169336 ataagaactccacacttaagcgtgcttgacttggagtagtctttggatgagtgacctaccagaaagtttcttggtaagcgtgcgagtgaggacaaaacac 3169435  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagt 155  Q
    | |||||| ||||||||| |||||||||||||||    
T  3169436 gttgaaaatactcgtgttggtttgtagggtcagt 3169469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 7678637 - 7678492
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||||||||  ||||||||||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||| |    
T  7678637 attccataagaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaa 7678538  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||    
T  7678537 aacacgctgaaaagactcgtgtaggtttgtggggtcagtcgacaat 7678492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 35871752 - 35871897
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||  ||||||||||||||||| | ||||||||||||| |    
T  35871752 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcggaaagtttcccggtaaacgtgcgagtgaggacaa 35871851  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| || ||||||| ||||    
T  35871852 aacacgctgaaaagactcgtgttggtttgtgggatcagtcggcaat 35871897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 49998761 - 49998907
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||| |    
T  49998761 attccataagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaa 49998860  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaatt 163  Q
    ||||||||||||||||||||||| |||||| ||| |||||| |||||    
T  49998861 aacacgctgaaaagactcgtgttggtttgtggggacagtcggcaatt 49998907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 23942804 - 23942647
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| |||||||||||   ||||| ||||||||||||| |    
T  23942804 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatggatgacctaccggaaagtttccaaataagcgtgcgagtgaggacaa 23942705  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgt 174  Q
    |||||| ||||| ||| |||||| |||||||||   |||| |||||  ||||||||||    
T  23942704 aacacgttgaaaggacccgtgttggtttgtaggaatagtcaacaatgcttaaagttgt 23942647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 50398553 - 50398408
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||| |||||| |||||||||||||||||| ||||  ||| |||||||||| || |||||| ||||||||| ||||||||||||| |    
T  50398553 attccataagaactccatagttaagcgtgcttgacttggagtattcttatgatgggtgacctaccgggaagtttaccggtaagcgtgcgagtgaggacaa 50398454  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    || || ||| ||||||||||||| ||||||||||||||||| ||||    
T  50398453 aatacactggaaagactcgtgttggtttgtagggtcagtcggcaat 50398408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 21067856 - 21068010
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| || |||||| ||||||| | ||||||||||||| |    
T  21067856 attccataagaacttcacagttaagcgtgcttgacttgaagtagtctttggatgggtgacctaccgggaagtttaccggtaaacgtgcgagtgaggacaa 21067955  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||| ||||||| | ||||||| ||||||||| | ||||| ||||  |||||||    
T  21067956 aacacactgaaaaaattcgtgttggtttgtaggcttagtcggcaatgcttaaagt 21068010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 24629443 - 24629306
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||| ||||||||||| |||||||||||||||| | | || |||| |||||||||| || ||    |||||||||| ||||||||||||| ||||||    
T  24629443 ataagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaaa---cccggtaagcgtgcgagtgaggacaaaacac 24629347  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  24629346 gctgaaaagactcgtgttagtttgtggggtcagtcggcaat 24629306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 12692014 - 12691907
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| ||||||||||||| |||||||||||||||| ||||||||||||| |    
T  12692014 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaa 12691915  T
Q  117 aacacgct 124  Q
    ||||||||    
T  12691914 aacacgct 12691907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 14351920 - 14352059
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||||| ||||||||||||||| | |||||||||| ||||||| || |||||| ||| ||||| ||| |    
T  14351920 attccataagaactccacagttaagcgtgtttgacttcgagtagtctttggatggatgacctactgcaaagttttccagtaagcgtgcaagtgaagacaa 14352019  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    || | ||||||||||||| |||| ||||||| ||||||||    
T  14352020 aatatgctgaaaagactcatgttggtttgtatggtcagtc 14352059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 4127428 - 4127288
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| | || ||| ||||||| | | || |||| ||||| |||  || |||||||||||||||| || |||||||||| ||||||    
T  4127428 ataagaactccacagttaagcatgattggcttggagcaattttgggatgggtgagctatcgggaagtttcccggtaagcgtgtgagtgaggacaaaacac 4127329  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||| ||||    
T  4127328 gctgaaaagactcgtgttggtttgtggggtcagtcggcaat 4127288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 9423873 - 9423738
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||| | |||| ||||  |||||||| ||||||||||||| |||| |||||||||| || || ||||||| ||||| ||||||||||||| |    
T  9423873 attccataagaatttcacaattaagtgtgcttgaattggagtagtcttaggatgggtgacctaccgggaaatttcccgttaagcatgcgagtgaggacaa 9423774  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtc 152  Q
    ||||||||||||||||||||||| || |||| ||||    
T  9423773 aacacgctgaaaagactcgtgttggtgtgtacggtc 9423738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 27578298 - 27578169
Alignment:
Q  20 ctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaac 119  Q
    ||||||||||| ||||||||| |||||||||||||||| ||| || ||||  |||||||  ||| ||||||||| | || | ||||||||||||| ||||    
T  27578298 ctataagaacttcacagttaagcgtgcttgacttggagcagttttgggatgagtgaccttatgggaagtttccctgaaaacgtgcgagtgaggacaaaac 27578199  T
Q  120 acgctgaaaagactcgtgttagtttgtagg 149  Q
    |||||||||||||||||||| | |||||||    
T  27578198 acgctgaaaagactcgtgttgggttgtagg 27578169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 50399008 - 50398864
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||||||||||| ||||  ||| |||||||||| ||  |  |||||||||| | ||| ||||||||| |    
T  50399008 attccataagaactccacagttaagcgtgtttgacttggagtattcttatgatgggtgacctaccgggga-attcccggtaaacgtgcaagtgaggacaa 50398910  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| || ||||||||||||| ||||||||||||||||| ||||    
T  50398909 aacacgttggaaagactcgtgttggtttgtagggtcagtcggcaat 50398864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 51331291 - 51331153
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||||| ||||  ||| |||||||||| || || |||  || ||||| ||||| ||||||| ||||||    
T  51331291 ataagaactccacagttaagcgtgcttgacttggagtattcttatgatgggtgacctaccgggaaattt-tcgataagcgtgcgaatgaggacaaaacac 51331193  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
     ||| |||||||||| |||||||||||||||||||| ||||    
T  51331192 actg-aaagactcgtattagtttgtagggtcagtcggcaat 51331153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 4127905 - 4127775
Alignment:
Q  16 aattctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacg 115  Q
    ||||| ||||||||| || |||||| |||||||| ||| ||| | | || |||| |||||||||| | ||||||| ||||||||| || ||||||||||     
T  4127905 aattccataagaacttcagagttaagcgtgcttggcttagagcaattttgggatgggtgacctaccgaaaagttttccggtaagcgtgtgagtgaggaca 4127806  T
Q  116 aaacacgctgaaaagactcgtgttagtttgt 146  Q
    |||||||||||||||||||||||| ||||||    
T  4127805 aaacacgctgaaaagactcgtgttggtttgt 4127775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 50814840 - 50814730
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| | |||||||| || |||||||||||||| | ||||||||||||| |    
T  50814840 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggatgacctaccgggaagtttcccggtaaacgtgcgagtgaggacaa 50814741  T
Q  117 aacacgctgaa 127  Q
    |||||||||||    
T  50814740 aacacgctgaa 50814730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 23350293 - 23350152
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| || |||||| |||||||||||||||| | | || |||| | |||||||| |  ||||||| | |||||| || |||||||||| ||||||    
T  23350293 ataagaacttcatagttaagcgtgcttgacttggagcaattttgggatggatgacctaccgagaagtttctctgtaagcgtgtgagtgaggacaaaacac 23350194  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaatt 163  Q
     ||||||||||||||||| |||||| |||||||||| |||||    
T  23350193 actgaaaagactcgtgttggtttgtggggtcagtcggcaatt 23350152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 7381460 - 7381546
Alignment:
Q  85 aagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||  |||||||    
T  7381460 aagttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtagggtcagtcggcaatgcttaaagt 7381546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 155
Target Start/End: Complemental strand, 8467815 - 8467690
Alignment:
Q  25 agaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgct 124  Q
    |||||||||||||||| |||||||||||||||| | | |||||    |||||||  ||| ||||||| ||| |||| ||||||||||||| ||||||| |    
T  8467815 agaactccacagttaagcgtgcttgacttggagcaat-tttgg----gtgaccttatgggaagtttctcggaaagcatgcgagtgaggacaaaacacgtt 8467721  T
Q  125 gaaaagactcgtgttagtttgtagggtcagt 155  Q
    ||||||||||||||| |||||| ||||||||    
T  8467720 gaaaagactcgtgttggtttgtggggtcagt 8467690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 13613913 - 13613786
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| |||||| | |||  |||||| | |  |||| | ||||||||||| |    
T  13613913 attctataagaactccacagttaagcgtgtttgacttggactagtctttggatgggtgacgttctgagaagttttctgaaaagccttcgagtgaggacaa 13613814  T
Q  117 aacacgctgaaaagactcgtgttagttt 144  Q
    | ||||||| |||||||| |||| ||||    
T  13613813 agcacgctgtaaagactcatgttggttt 13613786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 14571698 - 14571563
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | |   ||| ||||| ||  ||| ||||||| ||| |||  || |||||||||| ||||||    
T  14571698 ataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaacac 14571599  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    | |||||||||||||||| |||||| ||||||||||    
T  14571598 gttgaaaagactcgtgttggtttgtggggtcagtcg 14571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 53854857 - 53854708
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||| |||||| | || | |||||| |||||| |||||||  |||||||||   ||||||| ||||||| | ||||||||| ||| ||| ||    
T  53854857 ataagaactccatagttaagcatgttagacttgaagtagtttttggatgtgtgacctaccaaaaagtttaccggtaaacgtgcgagtgatgacaaaatac 53854758  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    | ||||||||||||||||  |||||||||| ||||| ||||  |||||||    
T  53854757 gttgaaaagactcgtgttgatttgtagggttagtcggcaatgcttaaagt 53854708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 87 - 171
Target Start/End: Complemental strand, 4414332 - 4414248
Alignment:
Q  87 gtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||| ||||||| ||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||  |||||||    
T  4414332 gtttcctggtaagcgtgcgagtcaggacaaaacacactgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagt 4414248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 27578919 - 27578783
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| ||||||||| ||||||| ||||||||   | || ||||  ||||||| |||| ||||||||| | |||| ||||||||||||| || ||     
T  27578919 ataagaactacacagttaagcgtgcttaacttggagcgattttgggatgcgtgaccttctgggaagtttcccagaaagcgtgcgagtgaggacaaatcat 27578820  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcga 158  Q
    |||||||||||| |||||  |||||||||||| ||||    
T  27578819 gctgaaaagacttgtgttgatttgtagggtcaatcga 27578783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 15268134 - 15268043
Alignment:
Q  71 ggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||| |||| || || |||| |||||||  ||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  15268134 ggtgagctaccgggaaatttctcggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 15268043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 13266218 - 13266356
Alignment:
Q  24 aagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgc 123  Q
    |||||| |||||||||| |||||||||||| ||| | | || |||| ||||||||  ||| |||||| |||  |||  ||||||||||||  ||||| |     
T  13266218 aagaaccccacagttaagcgtgcttgactttgagaaattttaggatgggtgaccttttgggaagttttccgaaaagtgtgcgagtgaggagaaaacatgt 13266317  T
Q  124 tgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| ||||| |||||| |||||||||||||||    
T  13266318 tgaaaagacttgtgttggtttgtggggtcagtcgacaat 13266356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 14572161 - 14572024
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||   || |||||||||||| ||| | | ||  ||| |||||||| |||| ||||||| ||| |||| || |||||||||| ||||||    
T  14572161 ataagaactccaca---aagcgtgcttgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaacac 14572065  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    | |||||||||||||||| |||||  |||||||||| ||||    
T  14572064 ggtgaaaagactcgtgttggtttgcggggtcagtcggcaat 14572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 27578467 - 27578327
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||| |||||| |||||||||||| ||  | | || ||||  | ||||| |||| |||||| |||  |||| ||||||||||||| ||||||    
T  27578467 ataagaactccatagttaagcgtgcttgacttcgaacaattttgggatgagcgaccttctgggaagttttccgacaagcgtgcgagtgaggacaaaacac 27578368  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    || ||||||||||||| | |||||| || |||||| |||||    
T  27578367 gcagaaaagactcgtgatggtttgtgggatcagtcaacaat 27578327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 29628683 - 29628624
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgac 76  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  29628683 attccataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgac 29628624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 35477855 - 35477930
Alignment:
Q  87 gtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||| |||||| | |||||| |||||| |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  35477855 gtttctcggtaaacgtgcgagagaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 35477930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 31817114 - 31817008
Alignment:
Q  56 agtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagt 155  Q
    |||||||||||||| |||||| | |||| ||||||||| | |||| | ||||||||||| ||||| | |||||||||||||| | |||||| ||| || |    
T  31817114 agtagtctttggatgggtgacattctgggaagtttcccagaaagcgtacgagtgaggacaaaacatgttgaaaagactcgtgctggtttgtggggccaat 31817015  T
Q  156 cgacaat 162  Q
    |||||||    
T  31817014 cgacaat 31817008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 53996053 - 53995991
Alignment:
Q  109 gaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||  |||||||    
T  53996053 gaggacaaaacacgttgaaaagactcgtgttggtttgtagggtcagtggacaatgtttaaagt 53995991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 40607105 - 40607178
Alignment:
Q  66 ggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgtt 139  Q
    |||| |||||||||| |||||||||  |||||||| | ||||||||||| ||| |||||||||| |||||||||    
T  40607105 ggatgggtgacctaccggaaagtttatcggtaagcgttcgagtgaggacaaaatacgctgaaaaaactcgtgtt 40607178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 53996130 - 53996082
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtcttt 65  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||    
T  53996130 attccataagaactccacagttaagtgtgcttgacttggagtagtcttt 53996082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 11828495 - 11828424
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttccc 93  Q
    ||||||||||||||||||| ||||||| |||||||| | | || |||| |||||||| ||||||| ||||||    
T  11828495 ataagaactccacagttaagcgtgctttacttggagcatttttgggatgggtgaccttctggaaaatttccc 11828424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 24628987 - 24628929
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctac 80  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| ||||||||||    
T  24628987 ataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctac 24628929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 50399273 - 50399331
Alignment:
Q  42 cgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagc 100  Q
    ||||| |||||||||||| ||||  ||| ||||||||||||| ||||||||||||||||    
T  50399273 cgtgcctgacttggagtattcttatgatgggtgacctactgggaagtttcccggtaagc 50399331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 13265860 - 13265901
Alignment:
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  13265860 aaacacgctgaaaagactcgtgttagtttgtgcggtcagtcg 13265901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 21220346 - 21220278
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaa 85  Q
    |||||||||||||| ||||||||| |||| ||||||||||| | | || |||  |||||||||||||||    
T  21220346 attctataagaactacacagttaagcgtgtttgacttggagcaattttgggacgggtgacctactggaa 21220278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 31817862 - 31817770
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac 114  Q
    ||||||||| || |||||| ||||||||||||| |||||| || |||| || ||||| | |  ||||||| ||| |||| |||||||||||||    
T  31817862 ataagaacttcatagttaagcgtgcttgacttgtagtagttttaggatgggcgaccttcggtgaagtttcgcggaaagcgtgcgagtgaggac 31817770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 50399334 - 50399374
Alignment:
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  50399334 gctgaaaagactcgtgttggtttgtagggtcagtcggcaat 50399374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 27026627 - 27026765
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| |  |||||| ||||||||||||| || | | || |||  |||||||| || | |||||| ||   |||| || || ||||||  |    
T  27026627 attccataagaactacgtagttaagcgtgcttgacttgaagcaattttgggaagggtgaccttctaggaagtttaccaaaaagcgtgtgactgaggaaaa 27026726  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagt 155  Q
    ||||||||||||||||||||||| |||||| ||| ||||    
T  27026727 aacacgctgaaaagactcgtgtttgtttgtggggccagt 27026765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 15306106 - 15306070
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgactt 53  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  15306106 attccataagaactccacagttaagcgtgcttgactt 15306070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 17029455 - 17029531
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttccc 93  Q
    |||| |||||||||||||||||||  |||||| |||||||| | | || || | |||||||| |||| |||||||||    
T  17029455 attccataagaactccacagttaagagtgcttaacttggagcatttttgggttgggtgaccttctgggaagtttccc 17029531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 20306174 - 20306063
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctac--tggaaagtttcccggtaagcttgcgagtgaggacgaaac 119  Q
    ||||||||| ||| ||||| |||||||||||||||| | | ||| ||| |||| |||||  | | ||||||||||  || | ||| ||||||||| ||||    
T  20306174 ataagaactacacggttaagcgtgcttgacttggagcaatttttagatgggtgccctactataggaagtttcccgaaaaacgtgcaagtgaggacaaaac 20306075  T
Q  120 acgctgaaaaga 131  Q
    || |||||||||    
T  20306074 actctgaaaaga 20306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 33294818 - 33294762
Alignment:
Q  106 agtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| || |||||||||||||||||||||||| | |||||| |||| || |||||    
T  33294818 agtgagaacaaaacacgctgaaaagactcgtgttgggttgtagcgtcaatctacaat 33294762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 52048603 - 52048547
Alignment:
Q  106 agtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| |||||||||||||||| || |||| ||||||  | ||||||||||||    
T  52048603 agtgaggacaaaacacgctgaaaagattcatgttggtttgtgagatcagtcgacaat 52048547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 99; Significance: 9e-49; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 18164 - 18002
Alignment:
Q  9 ggtagataattctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagt 108  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||| | |||||||    
T  18164 ggtagctaattccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctattggaaagtttttcggtaaacgtgcgagt 18065  T
Q  109 gaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||  |||||||||||||||||||||||  |||||||||||| ||||||||  |||||||    
T  18064 gaggacacaacacgctgaaaagactcgtgttgatttgtagggtcaatcgacaatgcttaaagt 18002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 17614 - 17474
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||  |||||||| ||||||||||||| ||||||    
T  17614 ataagaactccacagttaagcgtgcttgacttggagtactctttggatgggtgacctactcgaaagtttttcggtaagcgtgcgagtgaggacaaaacac 17515  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||  |||||||||||| ||||    
T  17514 gctgaaaagactcgtgttggttcatagggtcagtcggcaat 17474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 9e-49; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 8080363 - 8080209
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||| | ||||||| |||||||| ||||||||||||| |    
T  8080363 attccataagaacttcacagttaagcgtgcttgacttggagtagtctttggatgggtaacctactaggaagtttctcggtaagcgtgcgagtgaggacaa 8080264  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||  |||||||    
T  8080263 aacacgctgaaaagactcgtgttggtttgtagggccagtcgacaatgcttaaagt 8080209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 2044183 - 2044352
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||| ||||||||||||| |    
T  2044183 attccataataactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaatgggaagttttccggtaagcgtgcgagtgaggacaa 2044282  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttac 186  Q
    |||||||||||||||||||| || ||||||||||||||||  ||||  ||||||| ||| || |||||||    
T  2044283 aacacgctgaaaagactcgtattggtttgtagggtcagtcaccaatgcttaaagtcgtttgggatgttac 2044352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 32292092 - 32292211
Alignment:
Q  43 gtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagt 142  Q
    ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||    
T  32292092 gtgcttgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggt 32292191  T
Q  143 ttgtagggtcagtcgacaat 162  Q
    ||||||||||||||| ||||    
T  32292192 ttgtagggtcagtcggcaat 32292211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 10844636 - 10844491
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||| || | | || |||| |||||||||| || ||||||| |||||||| ||||||||||||| |    
T  10844636 attccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtgaggacaa 10844537  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  10844536 aacacgctgaaaagactcgtgtttgtttgtagggtcagtcgacaat 10844491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 41913095 - 41913264
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||  |||||||||| |||||||||  ||||||| ||| ||||||||| |    
T  41913095 attccataagaactccgcagttaagcgtgcttgacttgaagtagtctttggatgagtgacctactagaaagtttcttggtaagcgtgcaagtgaggacaa 41913194  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttac 186  Q
    |||||| |||||| |||||||||||||| |||||||||||||||||  ||||||| ||| | ||||||||    
T  41913195 aacacgttgaaaaaactcgtgttagtttatagggtcagtcgacaatgtttaaagtcgtttgcaatgttac 41913264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 32292522 - 32292652
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| || |||||| ||||||||| || |||||||||| |    
T  32292522 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgatctaccgggaagttttccggtaagcgtgtgagtgaggacaa 32292621  T
Q  117 aacacgctgaaaagactcgtgttagtttgta 147  Q
    ||||||||||||||||||||||| |||||||    
T  32292622 aacacgctgaaaagactcgtgttggtttgta 32292652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 17103206 - 17103352
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggt-gacctactggaaagtttcccggtaagcttgcgagtgaggacg 115  Q
    |||| ||||||||||||| ||||| |||||||||||||||| | | || |||| ||| ||||||| || |||||||||||||||| |||||||||||||     
T  17103206 attccataagaactccacggttaagcgtgcttgacttggagcaattttgggatgggttgacctaccgggaagtttcccggtaagcgtgcgagtgaggaca 17103305  T
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||    
T  17103306 aaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 17103352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 22548570 - 22548425
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| |||||||||||||| |||||||||||||||| | | || |||| |||||||||| || ||||||||| |||||| ||||||||||||| |    
T  22548570 attccataataactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaa 22548471  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  22548470 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 22548425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 27022359 - 27022215
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| ||||||||||||||||||||   ||||||| ||||||||||||| |    
T  27022359 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactggaaagttttt-ggtaagcgtgcgagtgaggacaa 27022261  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||    
T  27022260 aacacgctaaaaagactcgtgttggtttgtggggtcagtcgacaat 27022215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 12100821 - 12100960
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| ||||||||| |||||||||||||||| | | ||||||| |||||||||| || ||||||||  |||||| ||||||||||||| ||||||    
T  12100821 ataagaacttcacagttaagcgtgcttgacttggagcaat-tttggatgggtgacctaccgggaagtttcctcgtaagcgtgcgagtgaggacaaaacac 12100919  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  12100920 gctgaaaagactcgtgttggtttgtggggtcagtcgacaat 12100960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 27926029 - 27926177
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| |||||  ||| || |||||||||||||||  ||||||||||||| |||||     
T  27926029 ataagaactccacagttaagcgtgcttgacttggagcaat-ttgggatgggtgaggtaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacat 27926127  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  27926128 gctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagt 27926177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 31283672 - 31283528
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||||||||  ||||||||||| ||| | | ||||||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  31283672 attccataagaactccacagttaagtgtgcttgactttgagcaat-tttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 31283574  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||| || |||||||||||||||| |||||| |||||||||||||||    
T  31283573 aacgcgttgaaaagactcgtgttggtttgtggggtcagtcgacaat 31283528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 41659121 - 41658981
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||| ||||||||||| | | || |||| |||||||||| || ||||||||| |||||  ||||||||||||| ||||||    
T  41659121 ataagaactccacagttaagcgtgtttgacttggagcaattttgggataggtgacctaccgggaagtttccctgtaagtgtgcgagtgaggacaaaacac 41659022  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||| ||||    
T  41659021 gctgaaaagactcgtgttggtttgtggggtcagtcggcaat 41658981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 34308956 - 34308817
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||| ||||||| | | ||  ||| |||||||||| || |||||||||||||||| || |||||||||| |    
T  34308956 attccataagaactccacagttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaa 34308857  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  34308856 aacacgctgaaaagactcgtgttggtttgtggggtcagtc 34308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 22549016 - 22548871
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| |||||||||||||| |||||||||||||||| | | || |||| |||||||||| || ||||||||| |||||| ||||||||||||  |    
T  22549016 attccataaaaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggataa 22548917  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||| ||||||||||| |||||| |||||||||| ||||    
T  22548916 aacacgctgaacagactcgtgttggtttgtggggtcagtcggcaat 22548871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 25147661 - 25147805
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||| ||||||||||||||||||||||| | | || |||| |||||||||| || |||||||| | ||||| |||||||||| || |    
T  25147661 attccataagaactccatagttaatcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcctgataagcgtgcgagtgagtacaa 25147760  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  25147761 aacacgctgaaaagactcgtgttggtttgt-gggtcagtcggcaat 25147805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 28453463 - 28453608
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||||||||| | ||||||||| | ||||||||   ||||  ||||||||||||| |    
T  28453463 attccataagaactctacagttaagcgtgcttgacttggagtagtctttggatggatgacctactcggaagtttcctaataagactgcgagtgaggacaa 28453562  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| |||||||||| ||||||| ||||||| | ||||||||||||    
T  28453563 aacatgctgaaaagagtcgtgtttgtttgtaagatcagtcgacaat 28453608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 22026504 - 22026650
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac-g 115  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| ||| |||||  || |||||||||||||||| |||||||||||||      
T  22026504 attccataagaactccacagttaagcgtgcttgacttggagcaatattgggatgggtaacctatcgggaagtttcccggtaagcgtgcgagtgaggacaa 22026603  T
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| ||||||||||||||||| |||||| |||||||||| ||||    
T  22026604 aaacacactgaaaagactcgtgttggtttgtggggtcagtcggcaat 22026650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 12827275 - 12827130
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||  |||||||||||   |    
T  12827275 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggttaa 12827176  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||  | |||||||||||||| |||||| |||||||||||||||    
T  12827175 aacacttttaaaagactcgtgttggtttgtggggtcagtcgacaat 12827130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 25148092 - 25148236
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||| ||| | | || |||| |||||||||| || |||||||| | ||| | ||||||||||| | |    
T  25148092 attccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcc-gataaacgtgcgagtgaggtcaa 25148190  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  25148191 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 25148236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 30527498 - 30527349
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||||||||   || ||||||| ||||| ||||||||| ||||| ||||  ||||  |||||||||||| ||||||||||||  ||||||    
T  30527498 ataagaactccacagttaagattgtttgactttgagtaatctttggatgggtgatctacctgaaaacttcccggtaagcgtgcgagtgaggataaaacac 30527399  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||  |||||||| ||||||||||||  |||||||    
T  30527398 gctgaaaagactcgtgttgatttgtaggatcagtcgacaatgcttaaagt 30527349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 34308500 - 34308355
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||| |||| |||||||| ||||||| | | ||  ||| |||||||||| || |||||||||||||||| || |||||||||| |    
T  34308500 attccataagaactccacacttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaa 34308401  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||| | |||||| |||||||||| ||||    
T  34308400 aacacgctgaaaagactcgtgctggtttgtggggtcagtcggcaat 34308355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 21316125 - 21315986
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||||||||  ||||||||||||||||| | || | |  |||||||||| |  |||||||| ||||||| ||||||||||||| ||||||    
T  21316125 ataagaactccacagttaagtgtgcttgacttggagtaattttggtaagggtgacctaccgcgaagtttcc-ggtaagcgtgcgagtgaggacaaaacac 21316027  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||| ||||||||    
T  21316026 gctgaaaagactcgtgttggtttgtggggtcaatcgacaat 21315986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 25307889 - 25308011
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||| |||||||||||||||||| | |||||||||||| ||||||||||||| |||||| |||| ||||||||  ||| |||| ||||||||||||| |    
T  25307889 attctgtaagaactccacagttaagcttgcttgacttggtgtagtctttggatgggtgacgtacttgaaagtttttcggcaagcgtgcgagtgaggacaa 25307988  T
Q  117 aacacgctgaaaagactcgtgtt 139  Q
    |  ||||||||||||||||||||    
T  25307989 agtacgctgaaaagactcgtgtt 25308011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 33852279 - 33852157
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| |||| |||| |||||||||||||||||||||||||||| |||||||||  ||||||||||  | ||||| ||||||||||||| |    
T  33852279 attccataagaacttcacaattaagcgtgcttgacttggagtagtctttggatgggtgacctatcggaaagtttcatgataagcgtgcgagtgaggacaa 33852180  T
Q  117 aacacgctgaaaagactcgtgtt 139  Q
    |||||||| ||||||||| ||||    
T  33852179 aacacgctaaaaagactcatgtt 33852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 15819036 - 15818883
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||| ||||||||   ||||||||||||||||| |||||||| || ||||| |||| ||||||||||  |||  ||||||||||||| |    
T  15819036 attccataagaactc-acagttaaatttgcttgacttggagtaggctttggatgggcgaccttctgggaagtttcccgaaaagtgtgcgagtgaggacaa 15818938  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    | ||| ||||||||||| ||||| |||||| ||| |||||| ||||  |||||||    
T  15818937 agcacactgaaaagacttgtgttggtttgtggggccagtcggcaatacttaaagt 15818883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 6463510 - 6463410
Alignment:
Q  72 gtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttag-tttgtagggtcagtcgacaattattaaag 170  Q
    |||||||||  ||||  ||| |||||||| ||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||  ||||||    
T  6463510 gtgacctaccagaaaacttctcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttttttagggtcagtcgacaatgcttaaag 6463411  T
Q  171 t 171  Q
    |    
T  6463410 t 6463410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 10729748 - 10729876
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||| |||| |||| | ||||||||||||||||| ||| ||||||||  ||| || | |||  | |||| |||||||| |||| |    
T  10729748 attccataagaactccacaattaagcgtgatagacttggagtagtcttttgatgggtgaccttatgggaaatatcctagaaagcgtgcgagtgtggacaa 10729847  T
Q  117 aacacgctgaaaagactcgtgttagtttg 145  Q
    | |||||||||||||||||||||| ||||    
T  10729848 agcacgctgaaaagactcgtgttattttg 10729876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 27819267 - 27819124
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| ||||||||||||||  ||| ||||||| ||||||| ||||||| |||||||| |||  |||||| || | |||| || |||||||||| |    
T  27819267 attccataaaaactccacagttaagtgtgtttgactttgagtagtatttggatgggtgaccttctgataagttttccagaaagcgtgtgagtgaggac-a 27819169  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    | ||| |||||||||| |||||| | |||| |||||||||||||||    
T  27819168 agcacactgaaaagacccgtgtt-gattgtggggtcagtcgacaat 27819124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 6464931 - 6464872
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgac 76  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  6464931 attccataacaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgac 6464872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 22705345 - 22705422
Alignment:
Q  62 ctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgtt 139  Q
    |||||||  |||||||||| || |||||| || |||||| ||| ||||||||| ||||||||||||||||||||||||    
T  22705345 ctttggacgggtgacctaccgggaagttttccagtaagcgtgccagtgaggacaaaacacgctgaaaagactcgtgtt 22705422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 29971446 - 29971304
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| |||| ||||||||| |||| |||||||||| ||||||||| || ||||||||||||  || |||| |  ||| | ||| ||||||||| |    
T  29971446 attccataaaaacttcacagttaaacgtgtttgacttggaatagtctttgtatgggtgacctactg--aaatttctcaataaacatgcaagtgaggacaa 29971349  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaa 161  Q
    |||| |||||||| ||||||||| || | ||  ||||||||||||    
T  29971348 aacatgctgaaaaaactcgtgttggtctataaagtcagtcgacaa 29971304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 22840477 - 22840400
Alignment:
Q  110 aggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat-tattaaagttgttcggaatgttac 186  Q
    ||||| |||||| ||||||||||||||||| ||||||| |||||||||||||| | ||||||| ||  ||||||||||    
T  22840477 aggacaaaacacactgaaaagactcgtgttggtttgtatggtcagtcgacaatattttaaagtcgtctggaatgttac 22840400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 22840550 - 22840488
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctac 80  Q
    |||| |||||||||||||||| |||| |||||||||| || |||||||||||| ||||||||||    
T  22840550 attccataagaactccacagt-aatcatgcttgacttagattagtctttggatgggtgacctac 22840488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 9251098 - 9251155
Alignment:
Q  105 gagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| |||||||||||||| ||| ||||| |||||| |||||| ||||||||    
T  9251098 gagtgaggacaaaacacgctgaaaaaacttgtgttggtttgtggggtcaatcgacaat 9251155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 25144897 - 25144937
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggag 57  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  25144897 attccataagaactccacagttaagcgtgcttgacttggag 25144937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 15567572 - 15567533
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagt 61  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  15567572 ataagaactccgcagttaatcgtgtttgacttggagtagt 15567533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 29117446 - 29117501
Alignment:
Q  102 tgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    ||||||||||||| || ||  ||||||||||||||||| |||||||||||| ||||    
T  29117446 tgcgagtgaggacaaatcatcctgaaaagactcgtgttggtttgtagggtcggtcg 29117501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 1297136 - 1297205
Alignment:
Q  21 tataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagttt 90  Q
    ||||||||||||| ||||||  ||| |||||||| |||| |||||||||  ||||||| ||| |||||||    
T  1297136 tataagaactccatagttaagtgtgtttgacttgaagtaatctttggatgagtgaccttctgaaaagttt 1297205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 34688046 - 34688115
Alignment:
Q  102 tgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||| ||||||| ||||||| ||||||||||| |||| |||||||||  |||| ||||||  |||||||    
T  34688046 tgcgaatgaggacaaaacacgttgaaaagactcatgttggtttgtaggaccagtggacaatacttaaagt 34688115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 9e-49; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 43057086 - 43056932
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||||| |||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |    
T  43057086 attccataagaactccacagttaagcgtgattgacttagagtggtctttggatgggtgacctactgggaagtttcccggtaagcatgcgagtgaggacaa 43056987  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||| |||||||||||||    
T  43056986 aacacactgaaaaaacttgtgttggtttgtagggtcagtcggcaattattaaagt 43056932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20054557 - 20054412
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20054557 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20054458  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20054457 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20054412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20055013 - 20054868
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20055013 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20054914  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20054913 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20054868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20055469 - 20055324
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20055469 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20055370  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20055369 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20055324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20055925 - 20055780
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20055925 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20055826  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20055825 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20055780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20056381 - 20056236
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20056381 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20056282  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20056281 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20057284 - 20057139
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20057284 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20057185  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20057184 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20057139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20057740 - 20057595
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20057740 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20057641  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20057640 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20057595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20845682 - 20845537
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20845682 attccataagaactccacagttaagcgtgcttgacttggagaaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20845583  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20845582 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20056837 - 20056692
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20056837 attccataagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20056738  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20056737 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20056692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 46693751 - 46693611
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||| |||||||||||||| |||||||||||||||| | | || |||| |||||||||| |||||||||||||||| || ||||||||||||| ||||||    
T  46693751 ataataactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagtttcccggtatgcgtgcgagtgaggacaaaacac 46693652  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||| |||||| |||||| |||||||||||||||    
T  46693651 gctgaaaagacccgtgttggtttgtggggtcagtcgacaat 46693611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 50003089 - 50002957
Alignment:
Q  24 aagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgc 123  Q
    ||||||| ||||||||| |||||||||||||||| | | ||||||| |||||||||| || |||||||||||||||| ||||||||||||| ||||||||    
T  50003089 aagaacttcacagttaagcgtgcttgacttggagcaatttttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgc 50002990  T
Q  124 tgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    |||||||||||||||| |||||| |||||||||    
T  50002989 tgaaaagactcgtgttggtttgtggggtcagtc 50002957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 43057544 - 43057390
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||| |||||||||||||||| || ||||||| || |    
T  43057544 attccataagaactccacagttaagcgtgattgacttggagtggtctttggatcggtgacctactgggaagtttcccggtaagcatgtgagtgagaacaa 43057445  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||||| |||||||| ||||| |||||||  |||||||  ||||| |||||||    
T  43057444 aacacgctaaaaagacttgtgttggtttgtattgtcagtcagcaattcttaaagt 43057390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 38341031 - 38341176
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| ||||||||| |||||||||||||||| | | || |||| ||||||||||||| |||||||||||||||| ||||||||||||| |    
T  38341031 attccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaa 38341130  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||| ||||||||||||||| |||| | |||||||||| ||||    
T  38341131 aacacgcggaaaagactcgtgttggtttatggggtcagtcggcaat 38341176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 52250331 - 52250476
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||| || | | || | || |||||||||| || |||||||||||||||  ||||||||||||| |    
T  52250331 attccataagaactccacagttaagcgtgcttgacttgaagcaattttggaatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaa 52250430  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  52250431 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 52250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 52250668 - 52250813
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||| || | | || |||| |||||||||| || |||||||||||||||  ||||||||| ||| |    
T  52250668 attccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaagacaa 52250767  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  52250768 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 52250813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 52251005 - 52251150
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||| || | | || |||| |||||||||| || |||||||||||||||  ||||||||| ||| |    
T  52251005 attccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaagacaa 52251104  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  52251105 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 52251150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20054101 - 20053956
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||| |||| | | || |||| |||||||||| || |||||| | ||||||| ||||||||||||| |    
T  20054101 attccataagaactccacagttaagcgtgcttgactaggagcaattttgggatgggtgacctaccgggaagttttctggtaagcgtgcgagtgaggacaa 20054002  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||    
T  20054001 aacatgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 20053956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 50002728 - 50002583
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||| ||||||||||| |||||| |||| ||||||||||| | | || |||| | |||||||| || ||||| |||||||||| ||||||||||||| |    
T  50002728 attctttaagaactccatagttaagcgtgtttgacttggagcaattttgggatggatgacctaccgggaagttccccggtaagcgtgcgagtgaggacaa 50002629  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  50002628 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 50002583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 16451954 - 16451809
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| ||||||||| ||  ||||| |||| |||| ||| |    
T  16451954 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccaataagcgtgcgcgtgatgacaa 16451855  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  16451854 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 16451809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 16461107 - 16460962
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| ||||||||| ||  ||||| |||| |||| ||| |    
T  16461107 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccaataagcgtgcgcgtgatgacaa 16461008  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  16461007 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 16460962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 35759629 - 35759475
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| || |||||| ||||||||||||||||   | || ||||||||||||||| || ||||||  |||||||| ||||||||||||| |    
T  35759629 attccataagaacttcatagttaaacgtgcttgacttggagctattttgggattggtgacctaccgggaagtttttcggtaagcgtgcgagtgaggacaa 35759530  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||| |||| | |||||||||| |||| || |||||    
T  35759529 aacacgctgaaaagactcgtgttggtttttggggtcagtcggcaatcatgaaagt 35759475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20060361 - 20060216
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||||||||  ||||||||||||||  | | || |||| |||||||||| || |||||| ||||||||| ||||||||||||| |    
T  20060361 attccataagaactccacagttaagtgtgcttgacttggatcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaa 20060262  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| || ||||||||||||| |||||| |||||||||| ||||    
T  20060261 aacacgatggaaagactcgtgttggtttgtggggtcagtcggcaat 20060216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 7547791 - 7547907
Alignment:
Q  46 cttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttg 145  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||  || ||||| ||||||| ||||| |||||| |||||||| ||||||||  ||||    
T  7547791 cttgacttggagtagtgtttggatgggtgacctaccggaaagtttttcgataagcgtgcgagtaaggacaaaacacactgaaaagtctcgtgttgatttg 7547890  T
Q  146 tagggtcagtcgacaat 162  Q
    |||||||||||||||||    
T  7547891 tagggtcagtcgacaat 7547907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 30872971 - 30872824
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttg---cgagtgagga 113  Q
    ||||||||||||||||||| |||| | ||||||||||| |||||||||||||| |||||||||||| |||||||| ||  ||   ||   ||||||||||    
T  30872971 attctataagaactccacaattaagcatgcttgacttgcagtagtctttggatgggtgacctactgaaaagtttcacgaaaaatatgtgacgagtgagga 30872872  T
Q  114 cgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaa 161  Q
    | ||||| | |||||||| || ||||| ||||||||||||||||||||    
T  30872871 caaaacatgttgaaaagattcatgttaatttgtagggtcagtcgacaa 30872824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 2634591 - 2634730
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| ||| ||||| |||||||||||||||||||||||||||| | |||| | |||| |||||| ||   |||| ||||| |||||| ||    
T  2634591 attcaataagaacttcactgttaaacgtgcttgacttggagtagtctttggatggatgacattctgggaagttttccaaaaagcatgcgaatgaggatga 2634690  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    | |||||||||||||||| |||| ||||||| ||||||||    
T  2634691 agcacgctgaaaagactcttgtttgtttgtaaggtcagtc 2634730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 51372895 - 51372750
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||| ||| | | || |||| |||||||||   | ||||||  |||||||| ||||||||||||| |    
T  51372895 attccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctatcaggaagtttttcggtaagcgtgcgagtgaggacaa 51372796  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||  ||||||||||||||||||| |||||| |||||| ||| ||||    
T  51372795 aatccgctgaaaagactcgtgttggtttgtggggtcaatcggcaat 51372750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 31823091 - 31823001
Alignment:
Q  66 ggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    |||| ||||||||||||| ||||||| |||||||| ||||||||||||| ||||| ||||||||||||||||||  ||||| |||||||||    
T  31823091 ggatgggtgacctactgggaagtttctcggtaagcatgcgagtgaggacaaaacatgctgaaaagactcgtgttgatttgtggggtcagtc 31823001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 35010017 - 35009884
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||| |  || |||||||            |||||||| |    
T  35010017 attccataagaactccacggttaagcgtgcttgacttggagtagtctttggatgggtgacctaccgagaattttcccg------------gtgaggacaa 35009930  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||| ||||||| |||| |||| ||||||||||||||||| ||||    
T  35009929 aacacactgaaaaaactcatgttcgtttgtagggtcagtcggcaat 35009884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 7548221 - 7548292
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttccc 93  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||||| |  |||||||||    
T  7548221 ataagaactccacaattaagcgtacttgacttggagtagtctttggatgggtgacctaccgagaagtttccc 7548292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 12883649 - 12883801
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| ||||||||||||||  ||| |||||||| |||||| ||||||| | ||||||||||| ||||||||| |||||| ||    || |||| |    
T  12883649 attccataaaaactccacagttaagtgtgtttgacttgaagtagtttttggatggatgacctactgggaagtttcccagtaagcatg-ttttgtggacaa 12883747  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||| |||||||| |||||||||  |||||| ||||| ||||||||  |||||||    
T  12883748 aacatgctgaaaa-actcgtgttgatttgtaaggtcaatcgacaatgcttaaagt 12883801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 49996613 - 49996556
Alignment:
Q  105 gagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| ||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  49996613 gagtgaggacaaaacacgctgaaaagactcttgttagtttgtggggtcagtcggcaat 49996556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 35760000 - 35759940
Alignment:
Q  102 tgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| |||||| |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  35760000 tgcgagcgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 35759940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 39582553 - 39582635
Alignment:
Q  104 cgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttac 186  Q
    ||||||||||| ||||||||||| ||||||||| || ||||||||| ||||||| ||||  ||||||| ||| || |||||||    
T  39582553 cgagtgaggacaaaacacgctgagaagactcgttttggtttgtaggatcagtcggcaatgcttaaagtagtttgggatgttac 39582635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 8278155 - 8278209
Alignment:
Q  97 aagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggt 151  Q
    |||||||| ||||||||| ||||||| | ||||||||||||||||| ||||||||    
T  8278155 aagcttgcaagtgaggacaaaacacgttaaaaagactcgtgttagtctgtagggt 8278209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 2635049 - 2635101
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggat 69  Q
    |||| ||||||||||||||||||| |||| ||| ||||||||| |||||||||    
T  2635049 attcaataagaactccacagttaagcgtgtttggcttggagtaatctttggat 2635101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 23180855 - 23180995
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||| |||||| |||| |||||||||||||||| | | || |||| ||| |||| |||||||||||  |   ||   ||||||||| ||| |    
T  23180855 attccataagaattccacaattaagcgtgcttgacttggagaaattttgggatgggttaccttctggaaagtttttcaaaaaatgtgcgagtgacgacaa 23180954  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    |||| ||||||||||||  |||| |||||| |||| |||||    
T  23180955 aacatgctgaaaagactaatgttggtttgtcgggttagtcg 23180995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 12728117 - 12728197
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtag----tctttggattggtgacctactggaaagtttccc 93  Q
    |||| ||||||||||||||||||| | |||||||||||||||||    ||||||||| |||| ||| |||  |||||||||    
T  12728117 attccataagaactccacagttaagcatgcttgacttggagtagctagtctttggatgggtggccttctgagaagtttccc 12728197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 35760927 - 35760845
Alignment:
Q  25 agaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgag 107  Q
    ||||||||  |||||| |||||||||||||||| | | || |||| ||| |||||  || |||||||||||||||| ||||||    
T  35760927 agaactccgtagttaagcgtgcttgacttggagcaattttgggatgggtaacctatcgggaagtttcccggtaagcgtgcgag 35760845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 50002306 - 50002246
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacc 77  Q
    |||| ||||||||||||||||| |  ||||||||||||||| | | || ||||||||||||    
T  50002306 attccataagaactccacagttgagtgtgcttgacttggagcaattttgggattggtgacc 50002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 37045160 - 37045311
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| || |   |||||| ||||| ||||||||||||| |    
T  37045160 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaccggga---ttcccgataagcatgcgagtgaggacaa 37045256  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  37045257 aacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagt 37045311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 25238705 - 25238551
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  || ||||||   ||||||| ||||||||||||| |    
T  25238705 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggattggtgacctatcgggaagttttttggtaagcatgcgagtgaggacaa 25238606  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||| ||||||| |||| |||| ||||  |||||||    
T  25238605 aacacgctgaaaagactcgtgttggtttgtatggtcggtcggcaatggttaaagt 25238551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 4067376 - 4067227
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| ||||||||| | ||||||| ||| ||||||||| ||||||    
T  4067376 ataagaactccacagttaagcgtgcttgacttggagtagtctttggatggatgacctaccggaaagttttctggtaagcgtgcaagtgaggacaaaacac 4067277  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||||||||  ||||| ||||||||||||||||| ||||  |||||||    
T  4067276 gctgaaaagaccagtgttggtttgtagggtcagtcggcaatgcttaaagt 4067227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 13150575 - 13150430
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||| |    
T  13150575 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaa 13150476  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||    
T  13150475 aacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 13150430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 20885138 - 20884969
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||| || || ||||||| ||||| ||| ||| ||||| |    
T  20885138 attccataagaactccacaattaagcgtgcttgacttggagtagtatttggatgggtgacctaccgggaaatttcccgttaagcgtgcaagttaggacaa 20885039  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttac 186  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||||  ||||||| ||| || |||||||    
T  20885038 aacacgctgaaaagactcgtgttggtttgtagggtcagtctgcaatgcttaaagtcgtttgggatgttac 20884969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 30529812 - 30529968
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| || |||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||||||||| |    
T  30529812 attccataagaacttcatagttaagcgtgcttgacttggagtagtctttggatgggtgacctactgg-aagtttcccagtaagcatgcgagtgaggacaa 30529910  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgt 174  Q
    |||||||| |||||||| ||||| ||||| ||||| ||||| ||||  ||||||||||    
T  30529911 aacacgctaaaaagacttgtgttggtttgcagggttagtcggcaatgcttaaagttgt 30529968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 28561871 - 28562010
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  28561871 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggat-ggtgacctacggggaagtttcccggtaagcgtgcgagtgaggacaa 28561969  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  28561970 aacacgctgaaaagactcgtgttggtttgtggggtcagtcg 28562010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 25230726 - 25230581
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||| ||| |||| |||||||||||||||||||||||  ||| |||| |||||||| |||||||||||||||| ||||||||||  | |    
T  25230726 attccataagaactcaacaattaagcgtgcttgacttggagtagtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtgagatcaa 25230627  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  25230626 aacacgctggaaagactcgtgttggtttgtagggtcagtctacaat 25230581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 25238313 - 25238168
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||| ||| |||| |||||||||||||||||||||||  ||| |||| |||||||| |||||||||||||||| ||||||||||  | |    
T  25238313 attccataagaactcaacaattaagcgtgcttgacttggagtagtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtgagatcaa 25238214  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||    
T  25238213 aacacgctggaaagactcgtgttggtttgtagggtcagtctacaat 25238168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 39653297 - 39653434
Alignment:
Q  25 agaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgct 124  Q
    ||||||||||||||||  ||||||||||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||| |||||||||    
T  39653297 agaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgct 39653396  T
Q  125 gaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  39653397 gaaaagactcgtgttggtttgtggggtcagtcgacaat 39653434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 50347871 - 50348016
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| |  |||||||||| ||||  ||||||||||||| |    
T  50347871 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttcccgataagtgtgcgagtgaggacaa 50347970  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  50347971 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 50348016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 11180050 - 11179910
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || | |||||||||||||  || |||||||||| ||||||    
T  11180050 ataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggatgtttcccggtaagtgtgtgagtgaggacaaaacac 11179951  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  11179950 gctgaaaagactcgtgttggtttgtggggtcagtcgacaat 11179910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 14820284 - 14820424
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||  | | || |||| |||||||||  ||||||||||||||||||| ||| ||||||||| ||||||    
T  14820284 ataagaactccacagttaagcgtgcttgacttggaacaattttgggatgggtgacctatcggaaagtttcccggtaagcatgcaagtgaggacaaaacac 14820383  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||| ||||    
T  14820384 gctgaaaagactcgtgttggtttgtggggtcagtcggcaat 14820424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 13150120 - 13149975
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || | || |||||||||| || ||||||| |||||||  ||| ||||||||| |    
T  13150120 attccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaagtgtgcaagtgaggacaa 13150021  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  13150020 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 13149975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 32227237 - 32227097
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||  ||||||    
T  32227237 ataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggaaaaaacac 32227138  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
      |||||||||||||||| |||||| |||||||||||||||    
T  32227137 attgaaaagactcgtgttggtttgtggggtcagtcgacaat 32227097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 32227630 - 32227770
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||| ||||  ||||||||||||  ||||||    
T  32227630 ataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagtgtgcgagtgaggaaaaaacac 32227729  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
      |||||||||||||||| ||||||||||||||||||||||    
T  32227730 attgaaaagactcgtgttggtttgtagggtcagtcgacaat 32227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 32386762 - 32386610
Alignment:
Q  10 gtagataattctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtg 109  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||||| | | || |||| ||||||| || ||||||||||  ||||||| | ||||||    
T  32386762 gtagctaattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacccaccggaaagtttcttggtaagcgtccgagtg 32386663  T
Q  110 aggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||| ||||||||| |||||||||||||| |||||| |||||||||| ||||    
T  32386662 aggacaaaacacgctaaaaagactcgtgttggtttgtggggtcagtcggcaat 32386610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 25230269 - 25230115
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||  ||| |||||||||   | |||||| |||||||||  |||||||||||| |    
T  25230269 attcaataagaactccacagttatgcgtgcttgacttggagtagtcttatgatgggtgacctatcaggaagttttccggtaagcgagcgagtgaggacaa 25230170  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||| || ||||||| ||||| ||||||||||||||||||||||  |||||||    
T  25230169 aacacgttggaaagactagtgttggtttgtagggtcagtcgacaatgcttaaagt 25230115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 25237856 - 25237702
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||  ||| |||||||||   | |||||| |||||||||  |||||||||||| |    
T  25237856 attcaataagaactccacagttatgcgtgcttgacttggagtagtcttatgatgggtgacctatcaggaagttttccggtaagcgagcgagtgaggacaa 25237757  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||| || ||||||| ||||| ||||||||||||||||||||||  |||||||    
T  25237756 aacacgttggaaagactagtgttggtttgtagggtcagtcgacaatgcttaaagt 25237702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 27187346 - 27187204
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac-gaaaca 120  Q
    ||||||||||||||||||| |||||||||||| ||| | | || |||| |||||||||| || |||||||||| ||||| |||||||||||||  |||||    
T  27187346 ataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgagtgaggacaaaaaca 27187247  T
Q  121 cgctgaaaagactcgtgttagtttgtagggtcagtcgacaatt 163  Q
    ||||||||||||||||||| |||||| |||||||||| |||||    
T  27187246 cgctgaaaagactcgtgttggtttgtggggtcagtcggcaatt 27187204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 8067405 - 8067534
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||| |||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||| ||||| ||||||||||||| |    
T  8067405 attccataagaactccatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgagtgaggacaa 8067504  T
Q  117 aacacgctgaaaagactcgtgttagtttgt 146  Q
    ||||||||||||||||||||||| ||||||    
T  8067505 aacacgctgaaaagactcgtgttggtttgt 8067534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 14814079 - 14814219
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | ||  ||| |||||||||| | || |||||||||||||| ||||||||| ||| ||||||    
T  14814079 ataagaactccacagttaagcgtgcttgacttggagcaattttgtgatgggtgacctaccgaaaggtttcccggtaagcgtgcgagtgaagacaaaacac 14814178  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||| ||||| ||||    
T  14814179 gctgaaaagactcgtgttggtttgtggggttagtcggcaat 14814219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 16811506 - 16811649
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||| ||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||| ||||| |||||||||||||      
T  16811506 attccataagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcatgcgagtgaggac-- 16811603  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    || |||||||||||||||||||| |||||| |||||||||| ||||    
T  16811604 aaaacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 16811649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 31284297 - 31284152
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||| | || |||||| |||  |||| |||||||| |||| |    
T  31284297 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgccgggaagttttccgacaagcgtgcgagtggggacaa 31284198  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||| ||||||||||||||| |||||| |||||||||| ||||    
T  31284197 aacacgccgaaaagactcgtgttggtttgtggggtcagtcggcaat 31284152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 2911220 - 2911363
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||           |||||||| ||||||||||||| |    
T  2911220 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgagtgaccttct-----------cggtaagcgtgcgagtgaggacaa 2911308  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||| |||||||||||||||| ||||||||| ||| ||||||||  |||||||    
T  2911309 aacacgttgaaaagactcgtgttggtttgtaggatcaatcgacaatgcttaaagt 2911363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 25248236 - 25248382
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| |||||||| ||| | |||||||||||||||||||||||  ||| | |||||||| || ||||||| |||||||| ||||||||||||| |    
T  25248236 attccataataactccacggttcagcgtgcttgacttggagtagtcttatgatggatgacctaccgggaagtttcacggtaagcgtgcgagtgaggacaa 25248335  T
Q  117 aacacgctg-aaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| || ||||||||||||||  |||||  ||| ||||||||||    
T  25248336 aacacgttgaaaaagactcgtgttgatttgtgaggttagtcgacaat 25248382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 25802569 - 25802415
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||| ||||||||||| |||| |||||||||||||||||| |||  |||||||| || | ||||||| ||  |||  ||||||| ||| | |    
T  25802569 attccataagaaatccacagttaagcgtgtttgacttggagtagtcttaggacgggtgaccttctaggaagtttctcgaaaagagtgcgagtaaggtcaa 25802470  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||  ||||| |||||||||||||||| |||||  |||||||    
T  25802469 aacacgctgaaaagacgtgtgttggtttgtagggtcagtcaacaatgcttaaagt 25802415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 7477321 - 7477470
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||| |||| | |||||||||| |||||||||| |||| | ||||||  ||| || |||| ||| |||| |||||||||| || || |||    
T  7477321 ataagaactccacatttaagcatgcttgacttagagtagtcttaggatggctgaccttatgggaaatttctcggaaagcgtgcgagtgagaacaaagcac 7477420  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    | ||||||||||| |||| || ||| |||||||||||||||| |||||||    
T  7477421 gttgaaaagactcatgttggtatgtggggtcagtcgacaattcttaaagt 7477470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 16811050 - 16811195
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| |||| ||||  |||||||||||| || | | || |||| |||||||||| || ||||||||| |||||| ||||||||||||| |    
T  16811050 attccataagaacttcacatttaagtgtgcttgacttgtagcaattttgggatgggtgacctaccgggaagtttccccgtaagcgtgcgagtgaggacaa 16811149  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    || |||||||||||| ||||||| |||||| ||||| |||| ||||    
T  16811150 aatacgctgaaaagattcgtgttggtttgtggggtcggtcggcaat 16811195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 7494011 - 7494160
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||| |||| | ||||||||||||||| ||||| | || | |||||| || | || |||||||  |||| |||||||||| || || |||    
T  7494011 ataagaactccacatttaagcatgcttgacttggagttgtcttagcatggctgaccttctaggaaatttcccgtaaagcgtgcgagtgagaacaaagcac 7494110  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    | ||||||||||| |||| || ||| |||||||||||||||| |||||||    
T  7494111 gttgaaaagactcatgttggtatgtggggtcagtcgacaattcttaaagt 7494160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 25239070 - 25238994
Alignment:
Q  95 gtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  25239070 gtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagt 25238994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 53150828 - 53150688
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| ||||||||| ||||||| |||||||| | | || |||| ||||||||  ||  |||||||||   ||||  |||||||||||| |||||     
T  53150828 ataagaacttcacagttaaccgtgcttaacttggagcaattttgggatgggtgaccttatgagaagtttcccaaaaagcgggcgagtgaggacaaaacat 53150729  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    | ||||||||||| ||||||||||| ||||||||| |||||    
T  53150728 gttgaaaagactcatgttagtttgtggggtcagtcaacaat 53150688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 39641062 - 39641125
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctac 80  Q
    |||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  39641062 attccataagaactccacagttaagcgtgtttgacttggagcagtctttggattggtgacctac 39641125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 41473744 - 41473811
Alignment:
Q  95 gtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||| |||||| |||||||||| ||||    
T  41473744 gtaagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgccaat 41473811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 41474122 - 41474249
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||||||| ||||||||||| || |||||||||||||||  | | || |||| |||||| |||  ||||||||||| |||| | |||| ||||  || |    
T  41474122 attctataaaaactccacagtcaagcgtgcttgacttggaacaattttgggatgggtgacataccagaaagtttcccagtaatcgtgcgggtgaatacaa 41474221  T
Q  117 aacacgctgaaaagactcgtgttagttt 144  Q
    |||| | ||||||||||| |||||||||    
T  41474222 aacatgttgaaaagactcatgttagttt 41474249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 25231030 - 25230964
Alignment:
Q  105 gagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||||||| |||||||||||||||||||||||| ||||||| |||| |||| ||||  |||||||    
T  25231030 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtatggtcggtcggcaatggttaaagt 25230964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 41472417 - 41472500
Alignment:
Q  9 ggtagataattctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcc 92  Q
    ||||||| |||| ||||||||||||| ||||| ||||||||||||| |  | | || |||| |||||||||| |||||||||||    
T  41472417 ggtagatcattccataagaactccacggttaaacgtgcttgacttgaaacaattttgggatgggtgacctaccggaaagtttcc 41472500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 3899930 - 3900064
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||| | || | |||||||||||||| | | || | || |||||||| ||||||||||||||   |||| || ||||  |||| |||||     
T  3899930 ataagaactccacaataaagcatgcttgacttggagcaattttggtatgggtgaccttctggaaagtttcccaaaaagcgtgtgagtatggacaaaacaa 3900029  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    | ||||||||||||||||  | ||| |||||||||    
T  3900030 ggtgaaaagactcgtgttgatctgtggggtcagtc 3900064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 15405679 - 15405816
Alignment:
Q  25 agaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgct 124  Q
    ||||||||| ||||||  ||||||||||||||  | | || |||| |||||||| |||| |||||| ||   |||  ||| ||||||||| || ||||||    
T  15405679 agaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacaaagcacgct 15405778  T
Q  125 gaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||  || |||||| ||||||| |||||| |||||||    
T  15405779 gaaagaacccgtgttggtttgtaaggtcaggcgacaat 15405816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 25803020 - 25802964
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacct 78  Q
    |||||||||||  |||||| ||||||||||||||| ||||||| |||| ||||||||    
T  25803020 ataagaactccgtagttaagcgtgcttgacttggactagtcttaggatgggtgacct 25802964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 15388276 - 15388413
Alignment:
Q  25 agaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgct 124  Q
    ||||||||| ||||||  ||||||||||||||  | | || |||| |||||||| |||| |||||| ||   |||  ||| |||||||||  | ||||||    
T  15388276 agaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacatagcacgct 15388375  T
Q  125 gaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||  ||||||||| ||||||| ||| || |||||||    
T  15388376 gaaagaactcgtgttggtttgtaaggtaaggcgacaat 15388413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 15392643 - 15392780
Alignment:
Q  25 agaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgct 124  Q
    ||||||||| ||||||  ||||||||||||||  | | || |||| |||||||| |||| |||||| ||   |||  ||| |||||||||  | ||||||    
T  15392643 agaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacatagcacgct 15392742  T
Q  125 gaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||  ||||||||| ||||||| ||| || |||||||    
T  15392743 gaaagaactcgtgttggtttgtaaggtaaggcgacaat 15392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 18318837 - 18318909
Alignment:
Q  74 gacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgt 146  Q
    ||||| ||| |||||||| ||  |||| |||||||||| || |||||||||||||||| ||| ||| ||||||    
T  18318837 gaccttctgaaaagtttctcgcaaagcgtgcgagtgagaacaaaacacgctgaaaagattcgggttggtttgt 18318909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 1822031 - 1822185
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| || || ||||||| |    
T  1822031 attccataagaactccacatttaagcgtgcttgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagcgtgtgaatgaggacaa 1822130  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||  |||||||    
T  1822131 aacacgctgaaaagactcgtgttggtttgtagggtcggtcaacaatgcttaaagt 1822185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 10927424 - 10927279
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || || ||||||  |||||||| || || ||||||| |    
T  10927424 attccataagaactccacagttaaacgtgcttgacttggagtagtctttggatgggtgaccgaccgggaagtttttcggtaagcgtgtgaatgaggacaa 10927325  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  10927324 aacacgctgaaaagactcgtgttggtttgtagggtcggtcgacaat 10927279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 17445476 - 17445331
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||| ||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  17445476 attccataagaaatccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 17445377  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  17445376 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 17445331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 2474530 - 2474675
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | ||  ||| |||||||||| ||||||||||||||||||| ||||||||||||  |    
T  2474530 attccataagaactccacagttaagcgtgcttgacttggagcaattttgagatgggtgacctaccggaaagtttcccggtaagcatgcgagtgaggaaaa 2474629  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  2474630 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 2474675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 3887078 - 3886933
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| ||||||||| |||||||||||||||| | | ||||||| ||||||||||||| ||||||||| |||||| ||||||||||||| |    
T  3887078 attccataagaacttcacagttaagcgtgcttgacttggagcaatttttggatgggtgacctactgggaagtttcccagtaagcgtgcgagtgaggacaa 3886979  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| |||||||||||| |||||| |||||||||| ||||    
T  3886978 aacacgctgacaagactcgtgttggtttgtggggtcagtcggcaat 3886933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 20039496 - 20039367
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||| |    
T  20039496 attccataagaactctacagttaagtgtgcttgacttagagtagtctttggattggtgacctattgggaagtttcccggtaagcgtgcgagtgaggacaa 20039397  T
Q  117 aacacgctgaaaagactcgtgttagtttgt 146  Q
    |||||||||||||||||| |||| ||||||    
T  20039396 aacacgctgaaaagactcatgttggtttgt 20039367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 29680123 - 29679974
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| | |  |||||||||| ||||| ||| | ||||||| ||||||    
T  29680123 ataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgaccttccgagaagtttcccgataagcgtgcaaatgaggacaaaacac 29680024  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||||||||||||||| ||||||||||||||||| ||||  |||||||    
T  29680023 gctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagt 29679974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 34371737 - 34371882
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||| |||||||||| |||||||||||||||| | | || |||| ||||||||||||| |||||||||||||||| ||||||||||||| |    
T  34371737 attccataagaacaccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaa 34371836  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| |||||||||||||||| |||||| |||||||||| ||||    
T  34371837 aacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaat 34371882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 22557094 - 22557240
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||| |||||||| ||||||||| ||||| |||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  22557094 attctttaagaacttcacagttaagcgtgcctgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 22557193  T
Q  117 aacacgctg-aaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  22557194 aacacgctgtaaaagactcgtgttggtttgtagggtcagtcgacaat 22557240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 42788660 - 42788522
Alignment:
Q  24 aagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgc 123  Q
    ||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || ||||||| |||||||||||||||||||||| ||||||||    
T  42788660 aagaactccacagttaagcgtgcttgacttggagcaattttgggataggtgacctaccgggaagtttctcggtaagcttgcgagtgaggacaaaacacgc 42788561  T
Q  124 tgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| |||||| |||||| | |||||||||||||    
T  42788560 tgaaaagacccgtgttggtttgtggagtcagtcgacaat 42788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 3886622 - 3886477
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||| ||||| | | ||||||| |||||||||| || ||||||||| |||||| ||||||||||||| |    
T  3886622 attccataagaactccacagttaagcgtgtttgacgtggagcaatttttggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaa 3886523  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  3886522 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 3886477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 189193 - 189332
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| | |||||||||||||| | | || |||| |||||||||| ||||||||||||||||| | ||||||||||||| |    
T  189193 attccataagaactccacagttaagcatgcttgacttggagcaattttgggatgggtgacctaccggaaagtttcccggtaaacgtgcgagtgaggacaa 189292  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    ||||||||||||||||||||||| |||||| || ||||||    
T  189293 aacacgctgaaaagactcgtgttggtttgtgggatcagtc 189332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 8642055 - 8641911
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | ||  ||| |||||||||| |||| ||||| |||||||| ||||||||||||| |    
T  8642055 attccataagaactccacagttaagcgtgcttgacttggagcaattttaagatgggtgacctacgggaa-gtttctcggtaagcgtgcgagtgaggacaa 8641957  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  8641956 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 8641911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 27646851 - 27646716
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| || |||||||||| || |||||||||  ||| | ||||||||||||| |||||     
T  27646851 ataagaactccacagttaagcgtgcttgtcttggagtagtctttgcatgggtgacctaccgggaagtttcccaataaacgtgcgagtgaggacaaaacat 27646752  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    ||||||||||||| |||| ||||||| |||||||||    
T  27646751 gctgaaaagactcatgttggtttgtatggtcagtcg 27646716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 22556661 - 22556807
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||| |||||||| ||||||||| ||||  |||||||||| | | || |||| ||||||||||  | ||||||| |||||||| ||||||||||||| |    
T  22556661 attctttaagaacttcacagttaagcgtggctgacttggagcaattttgggatgggtgacctaccaggaagtttctcggtaagcgtgcgagtgaggacaa 22556760  T
Q  117 aacacgctg-aaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  22556761 aacacgctgtaaaagactcgtgttggtttgtagggtcagtcgacaat 22556807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 8391351 - 8391202
Alignment:
Q  9 ggtagataattctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagt 108  Q
    ||||| |||||| |||||||||||| |||||| |||||||||||||||| | | || |||| |||||||||| || ||||||| || ||| | |||||||    
T  8391351 ggtagctaattccataagaactccatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctcgataaacgtgcgagt 8391252  T
Q  109 gaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcga 158  Q
    |||||| ||||||||||| ||||||||||||  ||||| |||||||||||    
T  8391251 gaggacaaaacacgctgagaagactcgtgttgatttgtggggtcagtcga 8391202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 15513033 - 15512888
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||| |||| ||||||||||||| || | | || |||| | |||||||| || |||||||||||||||| ||||||||||||| |    
T  15513033 attccataagaactccacaattaaacgtgcttgacttgaagcaattttgggatggatgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 15512934  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    || ||| |||||||||||||||| |||||| |||||||||| ||||    
T  15512933 aatacgttgaaaagactcgtgttggtttgtggggtcagtcggcaat 15512888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 10926967 - 10926870
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac 114  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||| || ||||||||||    
T  10926967 attccataagaactccacagttaaacgtgcttgacttggagtagtctttggatgggtgacctaccgggaagtttcctggtaagcgtgtgagtgaggac 10926870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 34372193 - 34372338
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| ||||||||| |||||||||||||||| | | || ||||||||||||||| || |||||| ||| ||||| ||||||||||||  |    
T  34372193 attccataagaacttcacagttaagcgtgcttgacttggagcaattttgggattggtgacctaccgggaagttttccgataagcgtgcgagtgaggaaaa 34372292  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||| ||||||||| |||| | | |||||||| ||||    
T  34372293 aacacgctgaaaatactcgtgttggtttatggcgtcagtcggcaat 34372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 2474084 - 2474219
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||          ||||||||||| ||||||||||||| |    
T  2474084 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgaccta----------tcccggtaagcgtgcgagtgaggacaa 2474173  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  2474174 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 2474219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 1880208 - 1880355
Alignment:
Q  24 aagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgc 123  Q
    |||||||| |||||||| ||||| ||| |||| ||| | ||||||| | |||| |||| | ||||||   |||||||  |||||||||||| ||||||||    
T  1880208 aagaactctacagttaagcgtgcatgagttggtgtaatatttggatagatgacttactaggaagttttatggtaagcgagcgagtgaggacaaaacacgc 1880307  T
Q  124 tgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||||||||||||| ||||||| |||| |||||||||  |||||||    
T  1880308 tgaaaagactcgtgttggtttgtaaggtccgtcgacaatgcttaaagt 1880355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 21886167 - 21886070
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac 114  Q
    |||| |||||||||||| ||||||  ||||||||||||||| | | || |||| ||||||||||||| |||||||||||||||| |||||||||||||    
T  21886167 attccataagaactccaaagttaagtgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggac 21886070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 187718 - 187810
Alignment:
Q  52 ttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagttt 144  Q
    ||||||||||||||| ||  ||||| |||||  |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  187718 ttggagtagtctttgaatgtgtgacatactgagaagttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttt 187810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 2193941 - 2194074
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| ||||||||||            |||||||  ||||||||||||| |    
T  2193941 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctac------------cggtaagtgtgcgagtgaggacaa 2194028  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||    
T  2194029 aacacgctgaaaagacccgtgttggtttgtggggtcagtcgacaat 2194074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 38063803 - 38063705
Alignment:
Q  63 tttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||| ||||||||||||| |||||| ||||||||| ||||| ||||||| ||| |||||||||| ||||||||| || |||||||||| ||||||||    
T  38063803 tttggatgggtgacctactgggaagttttccggtaagcgtgcgaatgaggacaaaatacgctgaaaa-actcgtgttggtgtgtagggtcattcgacaat 38063705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 158
Target Start/End: Original strand, 8366596 - 8366730
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||| | |||||| |||| |||| ||| |||||| ||||||| ||||||||||||| |||||| ||  |||||  | |||||| ||| ||||||    
T  8366596 ataagaactctatagttaagcgtgtttgatttgaagtagtatttggatgggtgacctactgggaagttttccaataagc-ggtgagtgacgacaaaacac 8366694  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcga 158  Q
    | |||||||||||||||| ||||||| ||||||||||    
T  8366695 gttgaaaagactcgtgttggtttgta-ggtcagtcga 8366730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 30720276 - 30720136
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||| ||||||||||||||||||||||||  | | || |||| | |||| | || ||||| || |||  |||| |||||| |||||| ||||||    
T  30720276 ataagaactctacagttaatcgtgcttgacttggaacaattttgggatggatgactttcttgaaagctttccgaaaagcgtgcgagcgaggacaaaacac 30720177  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||| |||| |||||| | |||| ||||||||    
T  30720176 gctgaaaagactcctgttggtttgtggagtcaatcgacaat 30720136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 39147064 - 39147211
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |  ||| ||||||||||||| ||        |||||| |||||| |||||| |    
T  39147064 attccataagaactccacagttaagcgtgcttgacttggagtagtcgtatgatgggtgacctactgggaa-------agtaagcgtgcgagagaggacaa 39147156  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    || |||||  |||||||| |||| ||||||||||||| ||| ||||  |||||||    
T  39147157 aaaacgctagaaagactcatgttggtttgtagggtcaatcggcaatgcttaaagt 39147211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 18750217 - 18750063
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||| | |||||||| |||||||||||| | | || |||| |||||||| || | ||||||    | |||  ||||||||||||| |    
T  18750217 attccataagaactccataattaatcgtacttgacttggagcaattttaggatgggtgaccttctaggaagttttttagaaagtgtgcgagtgaggacaa 18750118  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||| ||||||||||||| ||| |||||| ||||||||| |||||  |||||||    
T  18750117 aacacactgaaaagactcgagttggtttgtggggtcagtcaacaatacttaaagt 18750063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 20858562 - 20858418
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||| ||||||   |||||||||||||| |  ||||||  ||||||||| |||| |||||| | |  |||| ||| ||||||||| |    
T  20858562 attccataagaactccatagttaaggttgcttgacttggagcaa-ctttgggatggtgaccttctgggaagttttctgaaaagcatgctagtgaggacaa 20858464  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||| |||||||||  |||||  ||||||||||||||    
T  20858463 aacacgctgaaaatactcgtgttgatttgttaggtcagtcgacaat 20858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 162
Target Start/End: Complemental strand, 24182251 - 24182122
Alignment:
Q  33 acagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagac 132  Q
    |||||||| |||| ||||||||||| | | || |||| |||||||| ||  |||||||| ||| |||  ||||||||||||  ||||||| ||||||||     
T  24182251 acagttaagcgtggttgacttggagcaattttgggatgggtgaccttctaaaaagtttctcggaaagtgtgcgagtgaggataaaacacgttgaaaagat 24182152  T
Q  133 tcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||| |||||| |||| ||||||||||    
T  24182151 tcgtgttggtttgtggggttagtcgacaat 24182122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 11757297 - 11757157
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| ||||||||||||  || | | |   ||| |||||||||| || || |||  |||||||| || ||||||||||||||  |    
T  11757297 ataagaactccacagttaagcgtgcttgacttacagcaatttcgagatgggtgacctaccgggaaatttttcggtaagcgtgtgagtgaggacgaaatcc 11757198  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||| ||||||||| |||| |||||  |||||||||| ||||    
T  11757197 gcttaaaagactcttgttggtttgcggggtcagtcggcaat 11757157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 21884007 - 21883961
Alignment:
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||    
T  21884007 aaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 21883961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 30685027 - 30684887
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||| || |||||  ||||||||||||||  | | ||  ||| | |||| | || |||||||| |||  |||| ||| || |||||| ||||||    
T  30685027 ataagaactctacggttaagtgtgcttgacttggaacaattttgagatggatgactttcttgaaagttttccgaaaagcgtgcaagcgaggacaaaacac 30684928  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||| ||| ||||    
T  30684927 gctgaaaagactcgtgttggtttgtggggtcaatcggcaat 30684887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 144
Target Start/End: Complemental strand, 26341270 - 26341169
Alignment:
Q  43 gtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagt 142  Q
    |||||||| |||||||||||||||||| ||||||||  || ||| |||||| | || | || |||||||||| |||||||   |||||||| ||||| ||    
T  26341270 gtgcttgatttggagtagtctttggatgggtgaccttttgaaaaatttcccagaaaacatgtgagtgaggacaaaacacgtctaaaagactggtgttggt 26341171  T
Q  143 tt 144  Q
    ||    
T  26341170 tt 26341169  T

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Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 30684572 - 30684480
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac 114  Q
    ||||||||||||||||||| ||||||  |||||||| | | || |||| |||||||| ||| |||||||| ||  |||| ||||||| |||||    
T  30684572 ataagaactccacagttaagcgtgctcaacttggagcaattttgggatgggtgaccttctgaaaagtttctcgaaaagcgtgcgagtaaggac 30684480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 6e-44; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 29039041 - 29038887
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||| ||| |||| |||||||||||||||||||||||||||| | |||||||| || |||||||||||||||| || || ||||||| |    
T  29039041 attccataagaactctacatttaagcgtgcttgacttggagtagtctttggatggatgacctaccggtaagtttcccggtaagcgtgtgactgaggacaa 29038942  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||    
T  29038941 aacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagt 29038887  T

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Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 28495979 - 28496124
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| ||||||||| ||| |||||||||||||||| ||||||||||||| |    
T  28495979 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctattgggaagtttcccggtaagcgtgcgagtgaggacaa 28496078  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  28496079 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 28496124  T

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Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 171
Target Start/End: Complemental strand, 22529249 - 22529102
Alignment:
Q  24 aagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgc 123  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||  ||||||| |||||||| || |||||||||| ||| ||||    
T  22529249 aagaacttcacagttaagcgtgtttgacttggagtagtctttggatgggtgacctactgagaagtttctcggtaagcgtgtgagtgaggacaaaatacgc 22529150  T
Q  124 tgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||| |||| ||||||||||||||||||||||  |||||||    
T  22529149 tgaaaagactcatgttggtttgtagggtcagtcgacaatgcttaaagt 22529102  T

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Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 42515217 - 42515371
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||  | || |||  |||||||| |||| |||||||| |    
T  42515217 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacataccaggaactttttcggtaagcgtgcgggtgaggacaa 42515316  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||    
T  42515317 aacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagt 42515371  T

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Target: chr7; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 34405612 - 34405467
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  34405612 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 34405513  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||||    
T  34405512 aacacgctgaaaagacccgtgttgatttgtggggtcagtcgacaat 34405467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 36422382 - 36422521
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||| ||||||    
T  36422382 ataagaactccacagttaagcgtgcttgacttggagcaat-ttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacac 36422480  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  36422481 gctgaaaagactcgtgttggtttgtggggtcagtcgacaat 36422521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 2466049 - 2466202
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | |  |||| |||||||||| || || ||||||||||||| ||| ||||||||| |    
T  2466049 attccataagaactccacagttaagcgtgcttgacttggagcaatttcgggatgggtgacctaccgggaaatttcccggtaagcatgcaagtgaggacaa 2466148  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  2466149 aacacgctgaaaagactcgtgttagtttgta-ggtcagtcgacaatgcttaaagt 2466202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 2941778 - 2941633
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||  |    
T  2941778 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggagaa 2941679  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| ||||||  ||||||||| ||||    
T  2941678 aacacgctgaaaagactcgtgttggtttgtgcggtcagtcggcaat 2941633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 7646499 - 7646354
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| ||||||||| |||||||||||||||| | | || |||| |||||||||| || ||||||| |||||||  ||||||||||||| |    
T  7646499 attccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctcggtaagtgtgcgagtgaggacaa 7646400  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  7646399 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 7646354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 7646540 - 7646685
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| ||||||||| ||| ||||| ||||||||||||| |    
T  7646540 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccgataagcgtgcgagtgaggacaa 7646639  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||| ||||||||||||||||| |||||| |||| ||||||||||    
T  7646640 aacacactgaaaagactcgtgttggtttgtggggttagtcgacaat 7646685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 3305364 - 3305200
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||| |||| ||||||||| ||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||  |||||||||| || ||||||    
T  3305364 ataaaaacttcacagttaagcgtgcttgatttggagtagtctttggatgggtgacctaccggaaagtttcctggtaagagtgcgagtgagaacaaaacac 3305265  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttac 186  Q
    ||||||||||||||||||  |||||||| ||||||  ||||  ||||||| ||  ||||||||||    
T  3305264 gctgaaaagactcgtgttgatttgtaggatcagtcagcaatacttaaagtcgtctggaatgttac 3305200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 42515669 - 42515814
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctac-tggaaagtttcccggtaagcttgcgagtgaggacg 115  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| |||||| ||| ||||||||| |||||||||||||     
T  42515669 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacatggaaa-ttttccggtaagcgtgcgagtgaggaca 42515767  T
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  42515768 aaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 42515814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 9125084 - 9125229
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||| |||| | | || |||| |||||||||| || |||||| ||||||||| ||||||||||||| |    
T  9125084 attccataagaactccacagttaagcgtgcttgactcggagcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaa 9125183  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| |||||||||||||||||| |||||| |||||||||| ||||    
T  9125184 aacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 9125229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 679941 - 680095
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac-g 115  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | || ||||||| |||||| | |||||||||| ||      
T  679941 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctgccgggaagtttcgcggtaaacatgcgagtgagaacaa 680040  T
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||| |||| ||||||| |||||||| |||||  |||||||    
T  680041 aaacacgctgaaaagactcatgttggtttgta-ggtcagtctacaatgcttaaagt 680095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 2611673 - 2611511
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||||||||| ||   ||  |    ||||| ||||||||||||| |    
T  2611673 attctataagaactccatagttaagcgtgctttacttggagtagtctttggatgggtgacctaccgg---gtaac----taagcgtgcgagtgaggacaa 2611581  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttac 186  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||  ||||||| ||  ||||||||||    
T  2611580 aacactctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtatggaatgttac 2611511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 13122526 - 13122380
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac-g 115  Q
    |||| ||||||||||||||||||| ||||||||| |||||| | | || |||| |||||||||| || |||||||||||||||| |||||||||||||      
T  13122526 attccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 13122427  T
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||||||||| |||||| |||||| ||| ||||    
T  13122426 aaacacgctgaaaagactcgtgttggtttgtggggtcaatcggcaat 13122380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 13125157 - 13125011
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac-g 115  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || ||||||||| |||||| |||||||||||||      
T  13125157 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaa 13125058  T
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||| |||||||||| |||||| |||||||||| ||||    
T  13125057 aaacacgctgaaaggactcgtgttggtttgtggggtcagtcggcaat 13125011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 35474142 - 35474008
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| ||| || || |||| |||||||  ||||||||||||| |    
T  35474142 attccataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgacgtaccgggaattttctcggtaagtgtgcgagtgaggacaa 35474043  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggt 151  Q
    |||||||||||| |||| ||||| |||||||||||    
T  35474042 aacacgctgaaatgacttgtgttggtttgtagggt 35474008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 26 - 162
Target Start/End: Original strand, 2193390 - 2193526
Alignment:
Q  26 gaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctg 125  Q
    ||||||||||||||| ||||||||| |||||| | | || |||| |||||||||| || |||||||||||||||| || |||||||||| ||||||||||    
T  2193390 gaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctg 2193489  T
Q  126 aaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||  ||||| |||||||||| ||||    
T  2193490 aaaagactcgtgttgatttgtggggtcagtcggcaat 2193526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 2189274 - 2189414
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || ||||  ||||||||| || |||||||||||||||| || |||||||||| ||||||    
T  2189274 ataagaactccacagttaagcgtgcttgacttggagcaattttgggatgagtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacac 2189373  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||| ||||||||||||  ||||| ||| |||||| ||||    
T  2189374 gctgagaagactcgtgttgatttgtggggacagtcggcaat 2189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 18833403 - 18833533
Alignment:
Q  9 ggtagataattctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagt 108  Q
    ||||| |||||  ||||||||||||||||||| |||| ||||||| ||| | | || |||| |||||||||| || |||||||||||||| | |||||||    
T  18833403 ggtagctaattacataagaactccacagttaagcgtgtttgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaaacgtgcgagt 18833502  T
Q  109 gaggacgaaacacgctgaaaagactcgtgtt 139  Q
    |||||| ||||||||||||||||||||||||    
T  18833503 gaggacaaaacacgctgaaaagactcgtgtt 18833533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 6719095 - 6718957
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||| |||||| |||||||||||||||||| | || |||| |||||| ||  || || ||||||||||||| ||||||||||||| |    
T  6719095 attccataagaactccagagttaagcgtgcttgacttggagtaat-ttgggatgggtgacatatcgggaactttcccggtaagcgtgcgagtgaggacaa 6718997  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    ||||| ||||||||| ||||||| |||||| |||||||||    
T  6718996 aacacactgaaaagaatcgtgttggtttgtggggtcagtc 6718957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 43776311 - 43776182
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || | || |||||||| | || |||||| || |||||| ||||| ||| ||| |    
T  43776311 attccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctgcggggaagttttccagtaagcgtgcgaatgaagacaa 43776212  T
Q  117 aacacgctgaaaagactcgtgttagtttgt 146  Q
    ||||||||||||||||||||||| ||||||    
T  43776211 aacacgctgaaaagactcgtgttggtttgt 43776182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 43233137 - 43233227
Alignment:
Q  72 gtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| |  |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  43233137 gtgacctaccgagaagttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 43233227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 6747619 - 6747482
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| |||||||||||||| ||||||||||||   ||||||||||||| |||||||||  || ||||||        |||||||||||||||| |    
T  6747619 attccataaaaactccacagttaagcgtgcttgacttatcgtagtctttggatgggtgacctatcgggaagttt--------gcttgcgagtgaggacaa 6747528  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| | |||||||||| ||||| ||||||||||||||||| ||||    
T  6747527 aacaagttgaaaagacttgtgttggtttgtagggtcagtcggcaat 6747482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 2465858 - 2465953
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgagg 112  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || || ||||||||||||| |||||||||||    
T  2465858 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagcatgcgagtgagg 2465953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 9623332 - 9623459
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| |||||| | |||  |||||| | |  |||| | ||||||||||| |    
T  9623332 attctataagaactccacagttaagcgtgtttgacttggactagtctttggatgggtgacgttctgagaagttttctgaaaagccttcgagtgaggacaa 9623431  T
Q  117 aacacgctgaaaagactcgtgttagttt 144  Q
    | ||||||| |||||||| |||| ||||    
T  9623432 agcacgctgtaaagactcatgttggttt 9623459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 6748021 - 6747943
Alignment:
Q  93 cggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||    
T  6748021 cggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagt 6747943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 26421781 - 26421624
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| ||||||||| |||| ||| ||| ||||||||||||||||||||||||  ||| |||||||  || || | || |||||||||| |    
T  26421781 attccataagaactacacagttaagcgtgtttggcttcgagtagtctttggattggtgaccttatgggaagtttcttggaaaacatgtgagtgaggacaa 26421682  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgt 174  Q
    |  | || ||||| ||||||||| || |||||||||||||| || |  ||||||||||    
T  26421681 agaatgccgaaaatactcgtgttggtatgtagggtcagtcgtcattgcttaaagttgt 26421624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 28495629 - 28495495
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || ||           ||| ||||||||||||| |    
T  28495629 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaa-----------agcgtgcgagtgaggacaa 28495541  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||| ||||||||||||||||||| |||||| |||||||||| ||||    
T  28495540 aacccgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 28495495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 29357472 - 29357341
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| ||||||||| |||| ||||||| ||||||||||  ||| | |||||| | || ||||| | ||  |||| |||||||||| || || |||    
T  29357472 ataagaactacacagttaaccgtgtttgacttagagtagtcttaagatggatgaccttccggtaagttcctcgaaaagcgtgcgagtgagaacaaagcac 29357373  T
Q  122 gctgaaaagactcgtgttagtttgtagggtca 153  Q
    | |||||||||||||||| |||||||||||||    
T  29357372 gttgaaaagactcgtgttggtttgtagggtca 29357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 36422575 - 36422652
Alignment:
Q  85 aagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||| |||  ||||||||||||| |||||| |||||||||||||||||  ||||| |||||||||||||||    
T  36422575 aagtttcccggcaagtgtgcgagtgaggacaaaacacactgaaaagactcgtgttgatttgtggggtcagtcgacaat 36422652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 46425866 - 46425929
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctac 80  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||||    
T  46425866 attccataagaactccacagttaagcgtgcttgacttggagtagtcttatgatgggtgacctac 46425929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 25182486 - 25182627
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||| |||||||||  ||| ||||||||||||||||||||||| |  ||||| |||| ||||||| |   |||| | ||||||||| | |    
T  25182486 attccataagaacttcacagttaagtgtgtttgacttggagtagtctttggatggaggaccttctgggaagtttctcaaaaagcgttcgagtgagggcaa 25182585  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcga 158  Q
    |||||||| |||| |||||| || | |||| |||||| ||||    
T  25182586 aacacgctaaaaaaactcgtattgggttgtggggtcaatcga 25182627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 35527142 - 35527077
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactg 82  Q
    |||| ||| ||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||    
T  35527142 attccataggaactccacagttaagcatgcttgacttggagtagtctttgcatgggtgacctactg 35527077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 31743825 - 31743741
Alignment:
Q  102 tgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgttac 186  Q
    ||||||||||| | |  ||||||||||||||||||||| ||||||||||| ||||||||||  ||||||| ||| || |||||||    
T  31743825 tgcgagtgaggtcaacgcacgctgaaaagactcgtgttggtttgtagggttagtcgacaatgcttaaagtcgtttgggatgttac 31743741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 5406604 - 5406486
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccg-gtaagcttgcgagtgaggacgaaaca 120  Q
    ||||||||||||||||||| |||||||||||| ||| | | || |||| | |||| | ||||||||||| |||   || | ||||||||||||| |||||    
T  5406604 ataagaactccacagttaagcgtgcttgactttgagcaattttgggatggatgactttctggaaagttttccgaaaaaacgtgcgagtgaggacaaaaca 5406505  T
Q  121 cgctgaaaagactcgtgtt 139  Q
    | ||||||| |||||||||    
T  5406504 cactgaaaacactcgtgtt 5406486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 26419168 - 26419111
Alignment:
Q  105 gagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| ||||| | |||||||||||||||| |||||| |||||||||||||||    
T  26419168 gagtgaggacaaaacatgttgaaaagactcgtgttggtttgtggggtcagtcgacaat 26419111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 11372657 - 11372704
Alignment:
Q  106 agtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtca 153  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||||    
T  11372657 agtgaggacaaaacatgctgaaaagactcgtgttggtttgtagggtca 11372704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 36015402 - 36015345
Alignment:
Q  105 gagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| || ||||| ||||    
T  36015402 gagtgaggacaaaatacgctaaaaagactcgtgttagtttgtagagttagtcggcaat 36015345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 7461318 - 7461258
Alignment:
Q  102 tgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| ||  ||||||||||||||||||||||||  ||||| || ||| ||||||||    
T  7461318 tgcgagtgaagataaaacacgctgaaaagactcgtgttgatttgtgggatcaatcgacaat 7461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 2072 - 1927
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  2072 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 1973  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    || |||||||||||||||||||| |||||| |||||||||||||||    
T  1972 aatacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 1345 - 1490
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  1345 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 1444  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||    
T  1445 aacacgctgaaaagactcgtgttggtttgtggcgtcagtcgacaat 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 10425 - 10569
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | ||||||| |||||||||| || |||||||| ||||||| ||||||||||||| |    
T  10425 attccataagaactccacagttaagcgtgcttgacttggagcaat-tttggatgggtgacctaccgggaagtttcctggtaagcgtgcgagtgaggacaa 10523  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  10524 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 10569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 3652658 - 3652805
Alignment:
Q  27 aactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctga 126  Q
    |||||||||||||| | |||||||||||||||||||||||||| |||||||||| || ||| |||||||||||| ||||||||||||| ||| | |||||    
T  3652658 aactccacagttaagcttgcttgacttggagtagtctttggatgggtgacctaccgggaagcttcccggtaagcgtgcgagtgaggacaaaaaaagctga 3652757  T
Q  127 aaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgt 174  Q
    |||||||| |||| ||||||||||||||| ||||||  ||||||||||    
T  3652758 aaagactcttgttggtttgtagggtcagttgacaatgcttaaagttgt 3652805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 2890860 - 2890714
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| ||||||||||||| | ||||  | |||| ||||||||||||  |||||||||| ||||| ||||||||||||| |    
T  2890860 attccataagaactccacagttaagcgtgcttgacttgaaatagtactaggatgggtgacctactgagaagtttcccgataagcgtgcgagtgaggacaa 2890761  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaatt 163  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  2890760 aacacgctaaaaagactcgtgttggtttgtagggtcagtcgacaatt 2890714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 20850446 - 20850591
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||| |||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| ||||||||||||| |    
T  20850446 attccataagaactctacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 20850545  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  20850546 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20850591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 17027547 - 17027407
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| || |||||||||| ||||||    
T  17027547 ataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacac 17027448  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||| ||||    
T  17027447 gctgaaaagactcgtgttggtttgtggggtcagtcggcaat 17027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 2720584 - 2720439
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||| || ||| |||||||||| ||||| |||||||||| || |    
T  2720584 attccataagaactccacagttaagtgtgcttgacttggagtagtctttggatgggtgacatattgggaagtttcccgataagcgtgcgagtgagaacaa 2720485  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| |||||||||||  ||||| ||||||||||| ||||    
T  2720484 aacacgctgagaagactcgtgtcggtttgcagggtcagtcggcaat 2720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 2891314 - 2891161
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||| ||||||||||||||  |||||||| |||||||||||||||||| |||||||||||   | |||||| ||||||| ||||||||||||| |    
T  2891314 attccataaaaactccacagttaaatgtgcttgatttggagtagtctttggatgggtgacctactacgatgtttcc-ggtaagcgtgcgagtgaggacaa 2891216  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||  |||||||    
T  2891215 aacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaatgcttaaagt 2891161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 13492449 - 13492603
Alignment:
Q  9 ggtagataattctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagt 108  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || ||||||||| |||||| |||||||    
T  13492449 ggtagctaattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagt 13492548  T
Q  109 gagg-acgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| |  |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  13492549 gaggaaaaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 13492603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 171
Target Start/End: Complemental strand, 20126203 - 20126049
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||| |||||| |||| ||||||||||||||||||||||||| || || |||||||    ||||||||| |||||| ||||||||||||| |    
T  20126203 attccataagaattccacaattaagcgtgcttgacttggagtagtctttgaatgggcgacctacctagaagtttcccagtaagcgtgcgagtgaggacaa 20126104  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||  |||||||    
T  20126103 aacacactgaaaagactcgtgttggtttgtagggtccgtcgacaatgcttaaagt 20126049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 9352187 - 9352332
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| ||||||||||  | ||||||| |||||||| ||||||||||||| |    
T  9352187 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacctggaagtttctcggtaagcgtgcgagtgaggacaa 9352286  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| |||||||||||||||||| |||||| |||||||||| ||||    
T  9352287 aacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 9352332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 17731130 - 17730985
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||| ||||||||||||| |||| |||||||||||||||| | | ||  ||| |||||||||| |||||||||  |||||||| ||| ||||||||| |    
T  17731130 attctttaagaactccacatttaagcgtgcttgacttggagcaattttgagataggtgacctaccggaaagtttatcggtaagcgtgcaagtgaggacaa 17731031  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||    
T  17731030 aacacgctaaaaagactcgtgttggtttgtagggtcagtcgacaat 17730985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 17851043 - 17851188
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||| || |||||||||| ||||||||  ||| || ||||||| ||||| |    
T  17851043 attctataagaactccacagttaagcgtgcttgacttggagtagtcttcggatgggagacctactgggaagtttcctagtacgcgtgcgagttaggacaa 17851142  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| |  ||||||||||||||| ||||||||||||| ||| ||||    
T  17851143 aacaagtcgaaaagactcgtgttggtttgtagggtcaatcggcaat 17851188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 7912003 - 7912148
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||  | |||||||||||||| | | || |||| |||||||||| || ||| ||| |||||||| ||||||||||||| |    
T  7912003 attccataagaactccacagttatgcttgcttgacttggagcaattttgggatgggtgacctaccgggaagattctcggtaagcatgcgagtgaggacaa 7912102  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||    
T  7912103 aacacgctgaaaagacttgtgttggtttgtggggtcagtcgacaat 7912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 13492914 - 13493054
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggac-g 115  Q
    |||| ||||||||||||||||||| |||||||||||| ||| | | || |||| |||||||||| |||||||| |||||||||| |||||||||||||      
T  13492914 attccataagaactccacagttaagcgtgcttgacttagagcaattttgggatgggtgacctaccggaaagttacccggtaagcgtgcgagtgaggacaa 13493013  T
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtc 156  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  13493014 aaacatgctgaaaagactcgtgttgatttgtagggtcagtc 13493054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 21311640 - 21311794
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||| ||||||| |||||||||||| ||||||||||  ||| |||||||||| || | |||| ||||||||  ||||||||| ||| |    
T  21311640 attccataagaactccgcagttaagcgtgcttgactttgagtagtcttatgatgggtgacctaccgggatgttttccggtaagtgtgcgagtgaagacaa 21311739  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||| || |||||||||| ||||||||||||| ||||||||  |||||||    
T  21311740 aacacgctgtaaggactcgtgttggtttgtagggtcaatcgacaatgcttaaagt 21311794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 11062410 - 11062555
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||| ||| |  | |||||||||| |    
T  11062410 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatcggaaagtttcccgataaacccgtgagtgaggacaa 11062509  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||| | | |||||  ||| ||| |||||||| ||||    
T  11062510 aacacgctgaaaaaatttgtgttgatttatagagtcagtcggcaat 11062555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 7912435 - 7912580
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||| |||||| |||||||||||||||| | | || | || |||||||| |||| |||||||||| ||||| | ||||||||||| |    
T  7912435 attccataagaactccatagttaaacgtgcttgacttggagcaattttggaatgggtgacctgctgggaagtttcccgttaagcgtacgagtgaggacaa 7912534  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||| |||||| |||| ||||| ||||    
T  7912535 aacacgctgaaaagactcatgttggtttgtggggttagtcggcaat 7912580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 14771740 - 14771595
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||||||||  ||||| ||| |||||||||||||||||  |||||||||| | |||||| || |||| | | |||| |||||| |    
T  14771740 attccataagaactccacagttaagtgtgctagacgtggagtagtctttggatgagtgacctactcggaagtttaccagtaaacgtacgagcgaggacaa 14771641  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| ||||||| |||| |||||||| |||||||||||||    
T  14771640 aacacgctgataagactcatgttggtttgtagagtcagtcgacaat 14771595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 13191529 - 13191389
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| ||||||||| |||||||||||||||| | | ||  ||| ||||||| || || |||||||||| ||||| ||||||||||||| ||| ||    
T  13191529 ataagaacttcacagttaagcgtgcttgacttggagcaattttgagatgggtgaccaaccgggaagtttcccgataagcgtgcgagtgaggacaaaatac 13191430  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
     ||||||||||||||||| |||||| |||||||||| ||||    
T  13191429 actgaaaagactcgtgttggtttgtggggtcagtcggcaat 13191389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 21312101 - 21312250
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||| |||| |||||| |||||||||||||||| ||||||  |||  ||||||||| || |||||||||||||||  ||  ||||| ||| ||||||    
T  21312101 ataagaaatccatagttaaacgtgcttgacttggagcagtcttatgatgagtgacctaccgggaagtttcccggtaagtgtgtaagtgaagacaaaacac 21312200  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
      |||||||||| ||||| ||||||||||||||||||||||  |||||||    
T  21312201 attgaaaagactggtgttggtttgtagggtcagtcgacaatgcttaaagt 21312250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 23986333 - 23986192
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| |||||||||  ||||||||||||||| | | || |||| |||||||| |||| ||||||| ||| |||| ||||||||||||  | ||||    
T  23986333 ataagaacttcacagttaagtgtgcttgacttggagcaattttgggatgggtgaccttctgggaagtttcacggaaagcgtgcgagtgaggagaagacac 23986234  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaatt 163  Q
    |||||||||||| ||||| |||||| |||||||||| |||||    
T  23986233 gctgaaaagacttgtgttggtttgtggggtcagtcggcaatt 23986192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 28780235 - 28780380
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||| | ||||||  ||||||||||||  |    
T  28780235 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttctggtaagtgtgcgagtgaggataa 28780334  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||   |||||||||||||||| |||||| ||||||| |||||||    
T  28780335 aacattttgaaaagactcgtgttggtttgtggggtcagccgacaat 28780380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 17851499 - 17851644
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||| ||| ||| | |||| || || ||| |||||| |||| | |    
T  17851499 attctataagaactccacaattaagcgtgcttgacttggagtagtcttcggatgggtgatctattgggaggttttcccgttagcgtgcgagcgagggcaa 17851598  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| | |||||| |||| || ||||||| |||||||| |||||    
T  17851599 aacacggtaaaaagaatcgtattggtttgtaaggtcagtcaacaat 17851644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 3653052 - 3653168
Alignment:
Q  42 cgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttag 141  Q
    |||||||||||||||||||||||||||| |||||||||  |  |||||||||| ||||| |||    |||||| ||||||||||||||||||||| || |    
T  3653052 cgtgcttgacttggagtagtctttggatgggtgacctatcgagaagtttcccgataagcgtgc----gaggacaaaacacgctgaaaagactcgtattgg 3653147  T
Q  142 tttgtagggtcagtcgacaat 162  Q
    |||||||||||| ||| ||||    
T  3653148 tttgtagggtcaatcggcaat 3653168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 20896709 - 20896571
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgagga-cg 115  Q
    |||| ||||||||||||| ||||| |||||||| ||||||| | | || |||| |||||||||| || || ||||||||||||  ||||||||||||       
T  20896709 attccataagaactccacggttaagcgtgcttggcttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagtgtgcgagtgaggagaa 20896610  T
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcag 154  Q
    |||||| ||||||||||||||||| |||||| |||||||    
T  20896609 aaacacactgaaaagactcgtgttggtttgtggggtcag 20896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 33775023 - 33774918
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||||||||||||  ||| |||||||| |||||||||||||| ||||||||||||  ||||||  |||||||| ||||||||||||  |    
T  33775023 attccataagaactccacagttaagtgtgtttgacttgcagtagtctttggatgggtgacctactgagaagtttttcggtaagcgtgcgagtgaggaaaa 33774924  T
Q  117 aacacg 122  Q
    ||||||    
T  33774923 aacacg 33774918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 23776571 - 23776710
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| |||| |||| ||| |||||||||||| | | || |||| | ||||||||||| ||||||||  |||| | ||||||||| ||| ||||||    
T  23776571 ataagaacttcaca-ttaagcgtacttgacttggagcaattttgggatggatgacctactgggaagtttcctagtaaacgtgcgagtgacgacaaaacac 23776669  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||| ||||||| |||||| | |||||||| ||||    
T  23776670 gctgaaaagattcgtgttggtttgtggagtcagtcggcaat 23776710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 27334305 - 27334363
Alignment:
Q  104 cgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  27334305 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 27334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 27395045 - 27395103
Alignment:
Q  104 cgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  27395045 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 27395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 6330928 - 6330812
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||  ||||||||||||||  ||||  ||| | |||||| ||| ||||| ||| ||||||    
T  6330928 ataagaactccacagttaagcgtgcttgactttgagtattcttatgattggtgacctac-cgaaaaattctcagtaagcgtgcaagtgatgacaaaacac 6330830  T
Q  122 gctgaaaagactcgtgtt 139  Q
    ||   |||||||||||||    
T  6330829 gcgagaaagactcgtgtt 6330812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 11062029 - 11062094
Alignment:
Q  92 ccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    ||||||||| ||||||||||||| ||||||||| |||| ||||||||| ||||||||||| |||||    
T  11062029 ccggtaagcgtgcgagtgaggacaaaacacgctaaaaaaactcgtgttggtttgtagggttagtcg 11062094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 2681180 - 2681096
Alignment:
Q  78 tactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||| ||||||||  |||||| ||| ||||||||| ||||||| ||| |||||||||||| |||||| |||||||||| ||||    
T  2681180 tactgggaagtttcctagtaagcgtgcaagtgaggacaaaacacgttgagaagactcgtgttggtttgtggggtcagtcggcaat 2681096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 31416104 - 31415953
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    |||||||||||||| |||| |||| ||||||| || |||| || |||| |  || ||  ||||||||||| ||  || | || |||||||||| ||||||    
T  31416104 ataagaactccacaattaagcgtgtttgacttagattagttttgggatggacgatcttatggaaagtttctcgaaaaacgtgtgagtgaggacaaaacac 31416005  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgt 174  Q
    |||||||||| ||||||| |||||| || ||||||| ||||  ||||||||||    
T  31416004 gctgaaaaga-tcgtgttggtttgtgggatcagtcggcaatacttaaagttgt 31415953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 28583152 - 28583234
Alignment:
Q  80 ctggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||| | |||| || ||||| |||| |||||  |||||||||||| ||||||||||| |||||||||| ||||    
T  28583152 ctggaaagtttcccagaaagcgtgtgagtggggacaaaacatactgaaaagactcatgttagtttgtggggtcagtcggcaat 28583234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 16520093 - 16520170
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccg 94  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | ||  ||| |||||||| | || ||||||||||    
T  16520093 attccataagaactccacagttaagcgtgcttgacttggagcaattttgagatgggtgacctgccgggaagtttcccg 16520170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 21312468 - 21312517
Alignment:
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    |||||||||||| ||||| ||||||||||||||||||||||  |||||||    
T  21312468 gctgaaaagactggtgttggtttgtagggtcagtcgacaatggttaaagt 21312517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 6331290 - 6331244
Alignment:
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||| |||| ||||||||||||| ||||||||||||||||| ||||    
T  6331290 aaacatgctggaaagactcgtgttggtttgtagggtcagtcggcaat 6331244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 3885025 - 3884977
Alignment:
Q  105 gagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtca 153  Q
    |||||||||| ||||||| || ||||||| ||||| |||||||||||||    
T  3885025 gagtgaggacaaaacacgatgtaaagacttgtgttggtttgtagggtca 3884977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 17205463 - 17205631
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||  ||||| | ||||||| |||||||| | || |||| || |||||    ||||||||  ||| || | |||||||||| || |    
T  17205463 attccataagaactccattgttaaacatgcttgatttggagtaattttgggatgggagacctttatgaaagtttttcggaaaacatgcgagtgagaacaa 17205562  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagttgttcggaatgtta 185  Q
    ||||| | ||||||||||| |||  ||||  || | ||||| ||||| | ||||||||| |||||||||    
T  17205563 aacacaccgaaaagactcgcgttgatttgcgggattagtcggcaattctcaaagttgtttggaatgtta 17205631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 19096 - 19236
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| || |||||||||| ||||||    
T  19096 ataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacac 19195  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||| |||||| |||||||||| ||||    
T  19196 gctgaaaagactcgtgttggtttgtggggtcagtcggcaat 19236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 4690 - 4839
Alignment:
Q  21 tataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaaca 120  Q
    ||||||||||||||||||||  |||||| |||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||| |||||    
T  4690 tataagaactccacagttaagtgtgcttaacttggagcaat-ttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaaca 4788  T
Q  121 cgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  4789 cgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagt 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 5151 - 5299
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctac-tggaaagtttcccggtaagcttgcgagtgaggacgaaaca 120  Q
    ||||||||||||||||||| ||||||| |||||||| | | || |||| |||||||||| |||||| ||||||||||||  ||||||||||||| |||||    
T  5151 ataagaactccacagttaagcgtgcttaacttggagcaat-ttgggatgggtgacctacctggaaa-tttcccggtaagtgtgcgagtgaggacaaaaca 5248  T
Q  121 cgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  5249 cgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagt 5299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 5320 - 5402
Alignment:
Q  90 tcccggtaagcttgcgagtgaggacgaaa-cacgctgaaaagactcgtgttagtttgtagggtcagtcgacaattattaaagt 171  Q
    ||||||||||  ||||||||||||| ||| ||||||||||||||||||||| ||||||||||| ||||||||||  |||||||    
T  5320 tcccggtaagtgtgcgagtgaggacaaaaacacgctgaaaagactcgtgttggtttgtagggtaagtcgacaatgcttaaagt 5402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 14723 - 14578
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||  ||||||||||||| |    
T  14723 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaa 14624  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||| |||||||||||||||||| |||||| ||||||| |||||||    
T  14623 aacatgctgaaaagactcgtgttggtttgtggggtcagccgacaat 14578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 163196 - 163341
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    ||||| |||||| ||||||||||| |||||||||||||||| | | || |||| |||||||||| |  ||||||||| |||||| ||||||||||||| |    
T  163196 attctttaagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttcccagtaagcgtgcgagtgaggacaa 163295  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||    
T  163296 aacacgctgaaaagactcgtgttggtttgtagggtctgtcgacaat 163341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 163155 - 163010
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||||||  || ||||||| |||||||| | ||||||||||| |    
T  163155 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcgggaagtttctcggtaagcgttcgagtgaggacaa 163056  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| ||| |||||| ||||    
T  163055 aacacgctgaaaagactcgtgttggtttgtggggccagtcggcaat 163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 162699 - 162553
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||| ||||||| |||||||||||||||| |   || ||||  |||||||||  | ||||||| || ||||| ||||||||||||| |    
T  162699 attccataagaactccgcagttaagcgtgcttgacttggagcaactttgggatgagtgacctacctggaagtttcgcgataagcgtgcgagtgaggacaa 162600  T
Q  117 aacacgctg-aaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||| |||||||||||||| |||||| |||||||||| ||||    
T  162599 aacacgctgaaaaagactcgtgttggtttgtggggtcagtcggcaat 162553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 69836 - 69691
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||  || |||||||| |||||||||||||||| |||||||| | || ||||||   || |||| || |||||| ||| |    
T  69836 attccataagaactccacagttatgcgggcttgactaggagtagtctttggatgggtgaccttcagggaagtttatgggaaagcgtgtgagtgatgacaa 69737  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    | |||||| |||||||||||||| |||||| || ||||||| ||||    
T  69736 accacgctaaaaagactcgtgttggtttgttggttcagtcggcaat 69691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 107484 - 107344
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| |||||| ||| || |||||||||||||||| ||||||||||||| |    
T  107484 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacgtaccgggaagtttcccggtaagcgtgcgagtgaggacaa 107385  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    |||| |||||||||||||||||| |||||| ||||||||||    
T  107384 aacatgctgaaaagactcgtgttggtttgtggggtcagtcg 107344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 105845 - 105991
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || ||||  ||||||||| |  |||||||| ||||||| ||||||||||||| |    
T  105845 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgtgtgacctaccgagaagtttcctggtaagcgtgcgagtgaggacaa 105944  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaatt 163  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||    
T  105945 aacacgctgaaaagactcgtgttggtttatagggtcagtcggcaatt 105991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 2867 - 3012
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || |||| || ||||||| || |||||||||||||||  ||||||||||||| |    
T  2867 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggagacctaccgggaagtttcccggtaagtgtgcgagtgaggacaa 2966  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||    
T  2967 aacacgctgaaaagactcgtgttgatttgtggggtcagtcggcaat 3012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 154882 - 155027
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||||||| | | || | || |||||||||| || ||||||| |||||||  ||| ||||||||| |    
T  154882 attccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaagtgtgctagtgaggacaa 154981  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  154982 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 155027  T

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Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 154503 - 154572
Alignment:
Q  93 cggtaagcttgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  154503 cggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 154572  T

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Target: scaffold0389 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 13554 - 13409
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| ||||||||||||||||||| |||||||||||| ||| | | || |||| |||||||||| || |||||||   |||||| ||||||||||||| |    
T  13554 attccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttctttgtaagcgtgcgagtgaggacaa 13455  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  13454 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 13409  T

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Target: scaffold0040 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 2231 - 2086
Alignment:
Q  17 attctataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacga 116  Q
    |||| |||||||||| | |||||| |||||||||||||||| | | || |||| |||||||||| || |||||| ||||||||| ||||||||||||| |    
T  2231 attccataagaactcaatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaa 2132  T
Q  117 aacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||  |||||||||||||||| |||||| |||||||||||||||    
T  2131 aacacattgaaaagactcgtgttggtttgtggggtcagtcgacaat 2086  T

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Target: scaffold1519 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 1706 - 1581
Alignment:
Q  33 acagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaaagac 132  Q
    |||||||| |||||||||||||||| | | || |||| |||||||||| || |||||||||||||||| || |||||||||| ||||||||| |||||||    
T  1706 acagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaacacgctaaaaagac 1607  T
Q  133 tcgtgttagtttgtagggtcagtcga 158  Q
    ||||||| |||||| |||||||||||    
T  1606 tcgtgttggtttgtggggtcagtcga 1581  T

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Target: scaffold0217 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 447 - 580
Alignment:
Q  29 ctccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacgctgaaa 128  Q
    ||||| |||||| |||||||||| ||||| | | || |||| |||||||||| || |||||||||| ||||| || |||||||||| |||||||||||||    
T  447 ctccatagttaagcgtgcttgacatggagcaattttgggatgggtgacctaccgggaagtttcccgataagcatgtgagtgaggacaaaacacgctgaaa 546  T
Q  129 agactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||| |||||| |||||||||| ||||    
T  547 agactcgtgttggtttgtggggtcagtcggcaat 580  T

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Target: scaffold0557 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 2236 - 2366
Alignment:
Q  23 taagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacacg 122  Q
    |||||||||||||||||| | |||||||| ||||||||||||  ||| ||||||||||          | |||||||| ||||||||||||  |||||||    
T  2236 taagaactccacagttaagcatgcttgacatggagtagtcttatgatgggtgacctacc---------ctcggtaagcgtgcgagtgaggagaaaacacg 2326  T
Q  123 ctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  2327 ctgaaaagactcgtgttggtttgtaggatcagtcgacaat 2366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 245678 - 245813
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| |||||||||||||||| | | |   ||| ||||| ||  ||| ||||||| ||| |||  || |||||||||| ||||||    
T  245678 ataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaacac 245777  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcg 157  Q
    | |||||||||||||||| |||||| ||||||||||    
T  245778 gttgaaaagactcgtgttggtttgtggggtcagtcg 245813  T

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Target: scaffold0005; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 245215 - 245352
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||   || |||||||||||| ||| | | ||  ||| |||||||| |||| ||||||| ||| |||| || |||||||||| ||||||    
T  245215 ataagaactccaca---aagcgtgcttgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaacac 245311  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    | |||||||||||||||| |||||  |||||||||| ||||    
T  245312 ggtgaaaagactcgtgttggtttgcggggtcagtcggcaat 245352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 246781 - 246704
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaag 99  Q
    |||||||||| | | |||||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  246781 ataagaactctataattaatcgtgcttaatttggagtagtctttggatgggtgacctactggtaagtttcccggtaag 246704  T

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Target: scaffold0137 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 7072 - 7212
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||||||||||||| | |||||||||||||| | | || | || ||||||||  ||||||||||||||  |||| || ||||| |||| |||||     
T  7072 ataagaactccacagttaagcatgcttgacttggagcaattttggtatgggtgaccttttggaaagtttcccgaaaagcatgtgagtggggac-aaacaa 7170  T
Q  122 gctgaaaagactcgtgttagtttgtagggtcagtcgacaatt 163  Q
    | |||||||||||||||| |  ||| |||||| |||||||||    
T  7171 ggtgaaaagactcgtgttggcctgtggggtcaatcgacaatt 7212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 14871 - 14981
Alignment:
Q  22 ataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaacac 121  Q
    ||||||||| ||||||||| | || |||||||||||| |||||||||| |||||||   ||| |||||| |||  || | ||||||||| ||| ||||||    
T  14871 ataagaacttcacagttaagcatgtttgacttggagtggtctttggatgggtgaccatatgggaagttttccgaaaaacgtgcgagtgatgacaaaacac 14970  T
Q  122 gctgaaaagac 132  Q
    ||| |||||||    
T  14971 gctaaaaagac 14981  T

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Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 26199 - 26338
Alignment:
Q  21 tataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaaca 120  Q
    |||||||||||||  |||||  ||||||||||||||||| | || ||||  |||| ||  | ||||||||| ||  ||||||||||| ||| ||  ||||    
T  26199 tataagaactcca--gttaagtgtgcttgacttggagtatttttaggatgagtgagcttatagaaagtttctcgaaaagcttgcgagggagaacataaca 26296  T
Q  121 cgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    |||||||||||||||||||  |||||||| ||| ||| ||||    
T  26297 cgctgaaaagactcgtgttgatttgtaggatcaatcggcaat 26338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 16174 - 16314
Alignment:
Q  21 tataagaactccacagttaatcgtgcttgacttggagtagtctttggattggtgacctactggaaagtttcccggtaagcttgcgagtgaggacgaaaca 120  Q
    ||||| |||| || |||||| ||||||||||||| |  ||| || ||||  |||||||  |  ||||||| |||| |||||||| ||||| ||| |||||    
T  16174 tataaaaacttcatagttaaacgtgcttgacttgaaacagttttaggatgagtgaccttatataaagttttccggaaagcttgcaagtgatgacaaaaca 16273  T
Q  121 cgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
     ||||||| | |||||||| ||||||||||||||||| ||||    
T  16274 tgctgaaagg-ctcgtgttggtttgtagggtcagtcggcaat 16314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 1 - 38
Alignment:
Q  118 acacgctgaaaagactcgtgttagtttgtagggtcagt 155  Q
    |||||||||||||||||||||| |||||||||||||||    
T  1 acacgctgaaaagactcgtgttggtttgtagggtcagt 38  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 63029 - 62983
Alignment:
Q  116 aaacacgctgaaaagactcgtgttagtttgtagggtcagtcgacaat 162  Q
    ||||||||||||||||||||| || |||||| |||||||||| ||||    
T  63029 aaacacgctgaaaagactcgtattggtttgtggggtcagtcggcaat 62983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 37249 - 37201
Alignment:
Q  102 tgcgagtgaggacgaaacacgctgaaaagactcgtgttagtttgtaggg 150  Q
    |||||||||||   |||||||||||||||| ||||||| ||||||||||    
T  37249 tgcgagtgagggaaaaacacgctgaaaagattcgtgttggtttgtaggg 37201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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