View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16055_high_6 (Length: 443)

Name: NF16055_high_6
Description: NF16055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16055_high_6
NF16055_high_6
[»] chr2 (1 HSPs)
chr2 (15-425)||(33637647-33638054)
[»] chr4 (3 HSPs)
chr4 (25-423)||(13784358-13784753)
chr4 (354-398)||(10553569-10553613)
chr4 (354-398)||(10571299-10571343)
[»] scaffold0128 (2 HSPs)
scaffold0128 (25-423)||(34021-34416)
scaffold0128 (25-196)||(29236-29404)
[»] chr3 (1 HSPs)
chr3 (35-422)||(3837593-3837980)
[»] scaffold0267 (1 HSPs)
scaffold0267 (35-425)||(13074-13464)
[»] chr8 (6 HSPs)
chr8 (18-283)||(29124533-29124798)
chr8 (51-334)||(31669440-31669720)
chr8 (298-416)||(40794177-40794295)
chr8 (298-419)||(29124849-29124973)
chr8 (351-402)||(29126468-29126519)
chr8 (131-216)||(40794307-40794392)
[»] chr7 (2 HSPs)
chr7 (33-422)||(20475969-20476358)
chr7 (345-397)||(15571919-15571971)


Alignment Details
Target: chr2 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 15 - 425
Target Start/End: Complemental strand, 33638054 - 33637647
Alignment:
Q  15 cacagaaatgggaggggagggttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33638054 cacagaaatgggaggggagggttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgt 33637955  T
Q  115 tggaccatccgtgaatggtagtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgatt 214  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33637954 tggacaattcgtgaatggtagtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgatt 33637855  T
Q  215 ttatcgtttgatatgcggatggaggcgtgtaagtatatgatgttacctgatggttttgttgaagtgcccaaagatgaaccaactcttgttgttttgaggg 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||||||||    
T  33637854 ttatcgtttgatatgcggatggaggcgtgtaagtatatgatgttacctgatggttttgtt---gtacccaaagatgaaccaactcttgttgttttgaggg 33637758  T
Q  315 atcgtttgtgcctttattatgtccacatgagaacctattttgttttgtgggaaatgagagagtttggagttcaagagtcttggactcgattggtgaatgt 414  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33637757 atcgtctgtgcctttattatgtccacatgagaacccatcttgttttgtgagaaatgagagagtttggagttcaagagtcttggactcgattggtgaatgt 33637658  T
Q  415 tagctatgttc 425  Q
    |||||||||||    
T  33637657 tagctatgttc 33637647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 4e-76; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 25 - 423
Target Start/End: Complemental strand, 13784753 - 13784358
Alignment:
Q  25 ggaggggagggttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgttggaccatcc 124  Q
    ||||||||| |||||||| ||||| ||||||||||||||||||||||| | |||||||  |||||||||||||||  ||   |||  |  |||||||| |    
T  13784753 ggaggggagagttcattgtatgggtgatagttgttggagaaagactatcgattgccctacttttccaattctactacga---acttccaatggaccattc 13784657  T
Q  125 gtgaatggtagtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgattttatcgtttg 224  Q
    ||||||||||||||||| |||||||||| ||||||| ||||  || ||   ||||||||| ||||| |||| ||| | ||||||||| |||| ||  |||    
T  13784656 gtgaatggtagtgttaactggttagcacttcacaacttaaacagtgatgattataaatgggaaaatattactatccaacaattagtggttttttcacttg 13784557  T
Q  225 atatgcggatggaggcgtgtaagtatatgatgttacctgatggttttgttgaagtgcccaaagatgaaccaactcttgttgttttgagggatcgtttgtg 324  Q
    || |||||| ||||   |||||||||||  || | ||||||||||||| ||| |||||| ||||||||||| |||||| ||||||||||| |||  | ||    
T  13784556 atctgcggaaggagaaatgtaagtatattttgctgcctgatggttttggtgaggtgccccaagatgaaccagctcttgctgttttgaggggtcgcctctg 13784457  T
Q  325 cctttattatgtccacatgagaacctattttgttttgtgggaaatgagagagtttggagttcaagagtcttggactcgattggtgaatgttagctatgt 423  Q
    |||||||||||  || ||||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| || |||||    
T  13784456 cctttattatgatcaaatgagaacacattttgttttgtgggaaatgagagagtatggagttcaagaatcttggactcggttggtgaatgtcagttatgt 13784358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 10553613 - 10553569
Alignment:
Q  354 ttgttttgtgggaaatgagagagtttggagttcaagagtcttgga 398  Q
    ||||||| ||| |||||| ||| ||||||||||||||||||||||    
T  10553613 ttgttttatggaaaatgacagattttggagttcaagagtcttgga 10553569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 10571343 - 10571299
Alignment:
Q  354 ttgttttgtgggaaatgagagagtttggagttcaagagtcttgga 398  Q
    ||||||| ||| |||||| ||| ||||||||||||||||||||||    
T  10571343 ttgttttatggaaaatgacagattttggagttcaagagtcttgga 10571299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 25 - 423
Target Start/End: Complemental strand, 34416 - 34021
Alignment:
Q  25 ggaggggagggttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgttggaccatcc 124  Q
    ||||||||| ||||| || ||||| ||||||||||||||||||||| | | |||||||  |||||||||||||||  ||   | |  |  |||||||| |    
T  34416 ggaggggagagttcactgtatgggtgatagttgttggagaaagactctcgattgccctacttttccaattctactacga---atttccaatggaccattc 34320  T
Q  125 gtgaatggtagtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgattttatcgtttg 224  Q
    |||||||| |||||||| |||||||||| ||||||| ||||  || ||   ||||||||| |||||||||||||| | ||||||||| |||| ||  |||    
T  34319 gtgaatggcagtgttaactggttagcacttcacaacttaaacagtgatgattataaatgggaaaatgttaccatccaacaattagtggttttttcacttg 34220  T
Q  225 atatgcggatggaggcgtgtaagtatatgatgttacctgatggttttgttgaagtgcccaaagatgaaccaactcttgttgttttgagggatcgtttgtg 324  Q
    || |||||| |||| | |||||||||||  |||| ||   |||||||| |||  ||||| ||||||||||| |||||| ||||||||||| |||  | ||    
T  34219 atctgcggaaggagacatgtaagtatattttgttgcccattggttttggtgagctgcccgaagatgaaccagctcttgctgttttgaggggtcgcctctg 34120  T
Q  325 cctttattatgtccacatgagaacctattttgttttgtgggaaatgagagagtttggagttcaagagtcttggactcgattggtgaatgttagctatgt 423  Q
    |||||||||||  || ||||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| || |||||    
T  34119 cctttattatgatcatatgagaacacattttgttttgtgggaaatgagagagtatggagttcaagaatcttggactcggttggtgaatgtcagttatgt 34021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 29404 - 29236
Alignment:
Q  25 ggaggggagggttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgttggaccatcc 124  Q
    ||||||||| |||||||| ||| | |||||||||||||||||||||   | |||||||  |||||||||||||||  ||   |||  |  |||||||| |    
T  29404 ggaggggagagttcattgtatgagtgatagttgttggagaaagactcccgattgccctacttttccaattctactacga---acttgcaatggaccattc 29308  T
Q  125 gtgaatggtagtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttacc 196  Q
    ||||||||||||||||| |||||||||| ||| ||| |||| ||| |||  ||||||||| |||||||||||    
T  29307 gtgaatggtagtgttaactggttagcacttcaaaacgtaaactgtgataattataaatgggaaaatgttacc 29236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 35 - 422
Target Start/End: Original strand, 3837593 - 3837980
Alignment:
Q  35 gttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgttggaccatccgtgaatggta 134  Q
    |||||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||   | | ||| |||||||||||| |||||||||||    
T  3837593 gttcattgcatgggcgatagttcttggagaaatactcttgcttgccatgattttccaattttactacaaaggactatcgttggaccattcgtgaatggta 3837692  T
Q  135 gtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgattttatcgtttgatatgcggat 234  Q
    ||||||| |||||| |   ||| ||| ||||||||||| ||||| || || ||||||||||||||||||| ||| ||||||| ||| ||||| |||| |     
T  3837693 gtgttaactggttaacgtatcataacttaaattgtcatttgtatgaaagggaaaatgttaccatcaaccagttattgattttttcgcttgatttgcgaaa 3837792  T
Q  235 ggaggcgtgtaagtatatgatgttacctgatggttttgttgaagtgcccaaagatgaaccaactcttgttgttttgagggatcgtttgtgcctttattat 334  Q
    |||||| |||||||||||  |||| || |||| |      | |||| || |||||  |  ||  |||| ||||||||| | | | |||||  ||||||||    
T  3837793 ggaggcatgtaagtatattttgttgccagatgctacaaccgtagtgtcccaagatctattaaaacttgctgttttgagaggttgcttgtgtttttattat 3837892  T
Q  335 gtccacatgagaacctattttgttttgtgggaaatgagagagtttggagttcaagagtcttggactcgattggtgaatgttagctatg 422  Q
      ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3837893 aaccacatgagaacccattttgttttgtgggaaatgaaagagtttggagttcaagagtcttggactcagttggtgaatgttagctatg 3837980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 35 - 425
Target Start/End: Original strand, 13074 - 13464
Alignment:
Q  35 gttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgttggaccatccgtgaatggta 134  Q
    |||||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||   | | ||| ||||||||||||   |||||||||    
T  13074 gttcattgcatgggcgatagttcttggagaaatactcttgcttgccatgattttccaattttactacaaaggactatcgttggaccatttctgaatggta 13173  T
Q  135 gtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgattttatcgtttgatatgcggat 234  Q
    ||||||| |||||| |   ||| ||| ||||||||||| ||||| || || ||||||||||||| ||||| ||| ||||||| ||| ||||| |||| |     
T  13174 gtgttaactggttaacgtatcataacttaaattgtcatttgtatgaaagggaaaatgttaccattaaccagttattgattttttcgcttgatttgcgaaa 13273  T
Q  235 ggaggcgtgtaagtatatgatgttacctgatggttttgttgaagtgcccaaagatgaaccaactcttgttgttttgagggatcgtttgtgcctttattat 334  Q
    |||| | |||||||||||  |||| || ||| ||      | |||| || |||||  || ||  |||| ||||||||||| | | |||||  ||||||||    
T  13274 ggagacatgtaagtatattttgttgccagatagtacaaccgtagtgtcccaagatctactaaaacttgctgttttgaggggttgcttgtgtttttattat 13373  T
Q  335 gtccacatgagaacctattttgttttgtgggaaatgagagagtttggagttcaagagtcttggactcgattggtgaatgttagctatgttc 425  Q
      ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  13374 aaccacatgagaacccattttgttttgtgggaaatgaaagagtttggagttcaagagtcttggactcagttggtgaatgttagctatgttc 13464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 29124533 - 29124798
Alignment:
Q  18 agaaatgggaggggagggttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgttgg 117  Q
    |||||||||| ||||| |||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||    ||||||||| |||||    
T  29124533 agaaatgggaagggagagttcattgcatgggtgaaagttgttggagaaagactcttgcttgccctgattttccaattctaccaaaaggcactcttgttgg 29124632  T
Q  118 accatccgtgaatggtagtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgatttta 217  Q
    ||||| ||||||||||||| |||| | |||||||||||| | | |||||||||||||| || ||| |||||||||||   || | || ||| | ||||||    
T  29124633 accattcgtgaatggtagtattaactagttagcacgtcatagcttaaattgtcatatgaatgaattgaaaaatgttattgtcgatcagttaataatttta 29124732  T
Q  218 tcgtttgatatgcggatggaggcgtgtaagtatatgatgttacctgatggttttgttgaagtgccc 283  Q
    ||  ||||||||||| ||||||| |||||||||||| ||||  || |||||||| ||||| |||||    
T  29124733 tcacttgatatgcggctggaggcatgtaagtatatgttgttgtctaatggttttattgaaatgccc 29124798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 51 - 334
Target Start/End: Original strand, 31669440 - 31669720
Alignment:
Q  51 atagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgttggaccatccgtgaatggtagtgttaattggttagc 150  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| ||||   || | || | |||||||||| ||||||||||||| |||| | ||||||    
T  31669440 atagatgttggagaaagacttttgcttgccctgattttccaattttactaaaagacgcttttgttggaccattcgtgaatggtagtattaacttgttagc 31669539  T
Q  151 acgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgattttatcgtttgatatgcggatggaggcgtgtaagtat 250  Q
    || ||| | | ||||||  |||||| || |||   ||||||||| | || |||| ||||| ||||||||| ||||||||  |||| || | | |||||||    
T  31669540 acatcatagcttaaatttccatatgaatgaatttcaaaatgttatcgtcgaccacttagtaattttatcgcttgatatgaagatgaagacatataagtat 31669639  T
Q  251 atgatgttacctgatggttttgttgaagtgcccaaagatgaaccaactcttgttgttttgagggatcgtttgtgcctttattat 334  Q
    ||| ||   ||| |||||||||||||| ||||| || |||  |||| ||||| |||||| |||  |||  ||||||||||||||    
T  31669640 atgctg---cctaatggttttgttgaaatgccccaaaatgggccaaatcttgatgttttaaggagtcgcatgtgcctttattat 31669720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 298 - 416
Target Start/End: Complemental strand, 40794295 - 40794177
Alignment:
Q  298 tcttgttgttttgagggatcgtttgtgcctttattatgtccacatgagaacctattttgttttgtgggaaatgagagagtttggagttcaagagtcttgg 397  Q
    ||||| ||||||||||| |||  | |||||||||||||   ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  40794295 tcttgctgttttgaggggtcgcctttgcctttattatgattacatgagaacacattttgttttgtgggaaatgagagagtttggagttcaagaatcttgg 40794196  T
Q  398 actcgattggtgaatgtta 416  Q
    ||||| ||| || ||||||    
T  40794195 actcggttgatggatgtta 40794177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 419
Target Start/End: Original strand, 29124849 - 29124973
Alignment:
Q  298 tcttgttgttttgagggatcgtttgtgcctttattat---gtccacatgagaacctattttgttttgtgggaaatgagagagtttggagttcaagagtct 394  Q
    ||||| ||||||||||| ||| |||||||||||||||   | ||| ||||||||| ||||   |||||||| ||||||||||||||||||||||||||||    
T  29124849 tcttgctgttttgaggggtcgattgtgcctttattattatgaccagatgagaacccatttcactttgtggggaatgagagagtttggagttcaagagtct 29124948  T
Q  395 tggactcgattggtgaatgttagct 419  Q
    ||||| |  ||||||||| ||||||    
T  29124949 tggacccacttggtgaatattagct 29124973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 402
Target Start/End: Original strand, 29126468 - 29126519
Alignment:
Q  351 attttgttttgtgggaaatgagagagtttggagttcaagagtcttggactcg 402  Q
    ||||| ||||| | ||||||||||||||||||||| ||||||||||||||||    
T  29126468 attttattttgggtgaaatgagagagtttggagtttaagagtcttggactcg 29126519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 40794392 - 40794307
Alignment:
Q  131 ggtagtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgatttt 216  Q
    ||||||||||| | |||||||| ||||||| ||||  || ||   ||||||||| |||||||||||||| | ||||||||| ||||    
T  40794392 ggtagtgttaactagttagcacttcacaacttaaacagtaatgattataaatgggaaaatgttaccatccaacaattagtggtttt 40794307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 422
Target Start/End: Complemental strand, 20476358 - 20475969
Alignment:
Q  33 gggttcattgcatgggagatagttgttggagaaagactattgcttgccctgattttccaattctacttggaggcactctcgttggaccatccgtgaatgg 132  Q
    |||||||||||||||| |||| ||||||||| |||| ||| | ||||||   ||||||||||||||| |    || ||   ||||| |||  |||| |||    
T  20476358 gggttcattgcatgggtgataattgttggaggaagattatagtttgccccacttttccaattctactggattacaatcagattggatcatttgtgagtgg 20476259  T
Q  133 tagtgttaattggttagcacgtcacaacataaattgtcatatgtataaatggaaaaatgttaccatcaaccaattagtgattttatcgtttgatatgcgg 232  Q
    || |||||| |||||||||   ||||||  ||| | ||||   ||| ||||| |||||||||||||||| || ||||  ||||| ||  ||||| | |      
T  20476258 taatgttaactggttagcattgcacaactcaaaatttcatgaatatgaatgggaaaatgttaccatcaatcagttagctattttttcacttgatctacaa 20476159  T
Q  233 atggaggcgtgtaagtatatgatgttacctgatggttttgttgaagtgcccaaagatgaaccaactcttgttgttttgagggatcgtttgtgcctttatt 332  Q
    | |||| | || ||||||| | |||| ||||||||||||  |||| | ||| ||||||||||||  |||  |||||||||||   |  | ||| ||||||    
T  20476158 aaggagacatgcaagtatacgttgttgcctgatggttttagtgaacttcccgaagatgaaccaaggcttactgttttgaggggctgcctatgcttttatt 20476059  T
Q  333 atgtccacatgagaacctattttgttttgtgggaaatgagagagtttggagttcaagagtcttggactcgattggtgaatgttagctatg 422  Q
    |||   | ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  20476058 atgattatatgagaacccattttgttttgtgggaaatgagagagtttggggttcaagagtcttggactcggttggtgaatgttagctatg 20475969  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 15571971 - 15571919
Alignment:
Q  345 gaacctattttgttttgtgggaaatgagagagtttggagttcaagagtcttgg 397  Q
    ||||| |||||||  ||||| ||||||| |||||||||||| |||||||||||    
T  15571971 gaacccattttgtcatgtggcaaatgagggagtttggagttgaagagtcttgg 15571919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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