View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16056_high_19 (Length: 456)

Name: NF16056_high_19
Description: NF16056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16056_high_19
NF16056_high_19
[»] chr1 (49 HSPs)
chr1 (1-431)||(39219122-39219546)
chr1 (207-431)||(36421630-36421854)
chr1 (194-355)||(48125671-48125832)
chr1 (256-429)||(42728994-42729167)
chr1 (276-361)||(33293590-33293675)
chr1 (199-369)||(8880374-8880544)
chr1 (209-355)||(43513033-43513178)
chr1 (299-429)||(13692510-13692641)
chr1 (209-311)||(29871288-29871390)
chr1 (257-411)||(41477003-41477157)
chr1 (225-371)||(16903439-16903593)
chr1 (206-291)||(23058470-23058555)
chr1 (260-374)||(23719524-23719637)
chr1 (206-291)||(34673282-34673367)
chr1 (171-371)||(5283558-5283758)
chr1 (209-332)||(13798201-13798324)
chr1 (204-362)||(2581506-2581661)
chr1 (209-291)||(44615478-44615560)
chr1 (209-291)||(44793009-44793091)
chr1 (206-295)||(17134947-17135036)
chr1 (206-311)||(19572512-19572617)
chr1 (206-311)||(24236761-24236866)
chr1 (250-311)||(29936400-29936461)
chr1 (250-311)||(34085219-34085280)
chr1 (206-287)||(50426661-50426742)
chr1 (250-310)||(12494995-12495055)
chr1 (250-310)||(28297919-28297979)
chr1 (307-429)||(45460143-45460267)
chr1 (224-331)||(25154845-25154952)
chr1 (206-305)||(36187220-36187319)
chr1 (255-362)||(47644908-47645015)
chr1 (286-372)||(5293490-5293576)
chr1 (249-311)||(42439713-42439775)
chr1 (250-319)||(23490815-23490884)
chr1 (259-291)||(9982943-9982975)
chr1 (259-291)||(49741060-49741092)
chr1 (259-311)||(51421842-51421894)
chr1 (230-305)||(34611063-34611138)
chr1 (225-291)||(10450078-10450144)
chr1 (209-291)||(35069892-35069974)
chr1 (206-288)||(45866185-45866267)
chr1 (204-285)||(3627983-3628064)
chr1 (206-311)||(16408926-16409031)
chr1 (206-311)||(18354080-18354185)
chr1 (159-216)||(20774657-20774714)
chr1 (156-188)||(10450015-10450047)
chr1 (259-311)||(13390397-13390449)
chr1 (169-291)||(16433130-16433249)
chr1 (250-310)||(23966858-23966918)
[»] chr4 (72 HSPs)
chr4 (209-429)||(21956818-21957037)
chr4 (215-429)||(42907758-42907971)
chr4 (256-429)||(8843856-8844028)
chr4 (256-429)||(8856820-8856992)
chr4 (230-429)||(33516097-33516297)
chr4 (300-427)||(33616210-33616337)
chr4 (209-414)||(25941024-25941229)
chr4 (257-373)||(36919050-36919166)
chr4 (251-414)||(4741262-4741424)
chr4 (260-431)||(21714030-21714201)
chr4 (178-367)||(25298806-25298994)
chr4 (225-429)||(12075651-12075855)
chr4 (206-362)||(35304517-35304673)
chr4 (206-293)||(14605926-14606013)
chr4 (223-429)||(37926432-37926636)
chr4 (303-414)||(39086042-39086152)
chr4 (259-429)||(9280943-9281113)
chr4 (257-375)||(9929219-9929337)
chr4 (257-362)||(16575050-16575155)
chr4 (300-429)||(25265242-25265370)
chr4 (210-342)||(36306743-36306875)
chr4 (156-291)||(29527821-29527956)
chr4 (156-291)||(30266281-30266416)
chr4 (156-291)||(30285772-30285907)
chr4 (215-370)||(37384203-37384357)
chr4 (300-429)||(17113098-17113226)
chr4 (209-318)||(19883060-19883169)
chr4 (225-405)||(3505163-3505343)
chr4 (206-310)||(6382273-6382377)
chr4 (204-291)||(31782622-31782709)
chr4 (280-373)||(7334260-7334351)
chr4 (256-362)||(12505581-12505687)
chr4 (307-429)||(30034545-30034667)
chr4 (162-305)||(32585484-32585633)
chr4 (206-311)||(31752445-31752550)
chr4 (249-362)||(43351419-43351532)
chr4 (156-291)||(10574370-10574505)
chr4 (206-343)||(10302040-10302178)
chr4 (206-291)||(1724311-1724396)
chr4 (206-291)||(6482036-6482121)
chr4 (206-291)||(21544588-21544673)
chr4 (300-361)||(40420680-40420741)
chr4 (250-311)||(47550398-47550459)
chr4 (261-362)||(55783442-55783543)
chr4 (261-362)||(55847624-55847725)
chr4 (250-310)||(5902659-5902719)
chr4 (250-310)||(7608960-7609020)
chr4 (206-310)||(11122870-11122974)
chr4 (250-310)||(44317525-44317585)
chr4 (212-288)||(48459493-48459569)
chr4 (269-332)||(43553414-43553477)
chr4 (215-269)||(3516348-3516402)
chr4 (257-426)||(23927693-23927859)
chr4 (206-291)||(11028082-11028167)
chr4 (206-291)||(15987263-15987348)
chr4 (206-291)||(47103747-47103832)
chr4 (250-311)||(53906350-53906411)
chr4 (250-310)||(26564821-26564881)
chr4 (279-355)||(50376425-50376501)
chr4 (250-310)||(55826668-55826728)
chr4 (256-291)||(568426-568461)
chr4 (265-336)||(3514105-3514176)
chr4 (231-310)||(21423851-21423930)
chr4 (231-310)||(31918584-31918663)
chr4 (224-291)||(45065258-45065325)
chr4 (206-288)||(47239386-47239468)
chr4 (224-293)||(1866568-1866637)
chr4 (159-216)||(26564927-26564984)
chr4 (206-311)||(39046941-39047046)
chr4 (276-332)||(54270584-54270640)
chr4 (257-321)||(4237346-4237410)
chr4 (259-295)||(28695196-28695232)
[»] chr6 (34 HSPs)
chr6 (155-429)||(9402454-9402727)
chr6 (165-418)||(8320754-8321007)
chr6 (152-355)||(32959800-32960002)
chr6 (259-419)||(13768947-13769107)
chr6 (209-429)||(20348930-20349149)
chr6 (255-431)||(1947840-1948016)
chr6 (209-355)||(256495-256642)
chr6 (224-414)||(34346023-34346222)
chr6 (157-293)||(29199836-29199972)
chr6 (206-290)||(28079696-28079780)
chr6 (258-371)||(10925495-10925608)
chr6 (209-414)||(29341131-29341341)
chr6 (159-291)||(14410809-14410940)
chr6 (206-311)||(12309555-12309660)
chr6 (206-311)||(32853827-32853932)
chr6 (204-291)||(24602854-24602941)
chr6 (300-361)||(34179102-34179164)
chr6 (212-305)||(15498313-15498406)
chr6 (206-311)||(27738755-27738860)
chr6 (250-310)||(3483967-3484027)
chr6 (206-310)||(5863383-5863487)
chr6 (259-311)||(12141368-12141420)
chr6 (300-368)||(14321793-14321861)
chr6 (206-291)||(2367329-2367414)
chr6 (206-291)||(10142518-10142603)
chr6 (250-311)||(24225681-24225742)
chr6 (206-275)||(34178329-34178398)
chr6 (259-291)||(10188126-10188158)
chr6 (250-310)||(27534668-27534728)
chr6 (212-311)||(32532523-32532622)
chr6 (206-295)||(14254957-14255045)
chr6 (177-293)||(7393858-7393974)
chr6 (259-291)||(12678147-12678179)
chr6 (250-310)||(32053072-32053132)
[»] chr8 (45 HSPs)
chr8 (209-429)||(8545352-8545572)
chr8 (257-429)||(28345356-28345528)
chr8 (258-414)||(29918487-29918643)
chr8 (210-429)||(17084111-17084332)
chr8 (209-427)||(30903911-30904130)
chr8 (224-429)||(27777216-27777422)
chr8 (256-413)||(36274924-36275080)
chr8 (210-355)||(12468223-12468367)
chr8 (159-291)||(17469258-17469390)
chr8 (224-375)||(9476031-9476182)
chr8 (300-429)||(6388599-6388728)
chr8 (224-431)||(5700219-5700426)
chr8 (281-371)||(5793508-5793598)
chr8 (210-315)||(14687378-14687483)
chr8 (209-318)||(30481424-30481533)
chr8 (156-343)||(9642301-9642489)
chr8 (206-310)||(24927933-24928037)
chr8 (256-371)||(17108299-17108414)
chr8 (206-291)||(20399595-20399680)
chr8 (281-332)||(14155494-14155545)
chr8 (206-285)||(27932422-27932501)
chr8 (209-304)||(37960965-37961060)
chr8 (206-319)||(45236040-45236153)
chr8 (259-295)||(1012618-1012654)
chr8 (259-319)||(14186295-14186355)
chr8 (215-311)||(24870033-24870129)
chr8 (250-310)||(32303045-32303105)
chr8 (230-290)||(34777070-34777130)
chr8 (266-343)||(27056615-27056693)
chr8 (206-271)||(6388516-6388581)
chr8 (206-287)||(15068588-15068668)
chr8 (206-311)||(29108822-29108927)
chr8 (206-311)||(39445576-39445681)
chr8 (315-355)||(11880867-11880907)
chr8 (315-355)||(11898283-11898323)
chr8 (387-431)||(29416359-29416403)
chr8 (250-293)||(40789590-40789633)
chr8 (250-288)||(2075864-2075902)
chr8 (209-291)||(2183609-2183691)
chr8 (300-350)||(35747283-35747332)
chr8 (159-216)||(2075775-2075832)
chr8 (210-291)||(10297461-10297542)
chr8 (257-290)||(36897060-36897093)
chr8 (215-288)||(40248380-40248453)
chr8 (250-290)||(43113670-43113710)
[»] chr2 (42 HSPs)
chr2 (205-431)||(25210241-25210467)
chr2 (209-428)||(30696791-30697010)
chr2 (207-429)||(35248386-35248604)
chr2 (225-429)||(34214676-34214879)
chr2 (257-371)||(13531873-13531987)
chr2 (162-310)||(6027845-6027993)
chr2 (303-430)||(13954610-13954737)
chr2 (303-430)||(14095817-14095944)
chr2 (212-419)||(31600774-31600981)
chr2 (256-414)||(35965215-35965374)
chr2 (250-332)||(4961495-4961577)
chr2 (251-405)||(40359234-40359388)
chr2 (206-304)||(13705361-13705459)
chr2 (206-370)||(17845391-17845556)
chr2 (206-291)||(38342519-38342604)
chr2 (299-429)||(29656828-29656959)
chr2 (300-355)||(34544405-34544460)
chr2 (300-414)||(35409248-35409360)
chr2 (206-311)||(8915938-8916042)
chr2 (272-353)||(11958957-11959038)
chr2 (206-311)||(37999467-37999572)
chr2 (250-310)||(24414176-24414236)
chr2 (206-330)||(34458833-34458956)
chr2 (204-291)||(18485652-18485739)
chr2 (208-291)||(43371557-43371640)
chr2 (1-51)||(15886366-15886416)
chr2 (303-361)||(37309828-37309886)
chr2 (206-311)||(7314648-7314753)
chr2 (206-287)||(24051624-24051705)
chr2 (250-291)||(30846950-30846991)
chr2 (206-287)||(37106700-37106781)
chr2 (250-310)||(36128150-36128210)
chr2 (259-310)||(9632371-9632422)
chr2 (206-288)||(22900801-22900883)
chr2 (323-381)||(33174307-33174365)
chr2 (210-291)||(3547170-3547251)
chr2 (250-291)||(14331531-14331572)
chr2 (230-291)||(42798012-42798073)
chr2 (259-320)||(45256798-45256859)
chr2 (259-311)||(10920629-10920681)
chr2 (156-188)||(39256398-39256430)
chr2 (224-284)||(45115569-45115629)
[»] chr5 (38 HSPs)
chr5 (209-431)||(38972785-38973007)
chr5 (159-371)||(6810081-6810293)
chr5 (250-426)||(29664839-29665015)
chr5 (156-414)||(17153049-17153306)
chr5 (257-429)||(27900453-27900623)
chr5 (209-361)||(16311297-16311448)
chr5 (300-431)||(35583980-35584110)
chr5 (209-419)||(40187661-40187870)
chr5 (159-311)||(35193943-35194095)
chr5 (215-402)||(8020507-8020694)
chr5 (159-310)||(12447365-12447515)
chr5 (213-429)||(18451893-18452109)
chr5 (274-371)||(12457440-12457537)
chr5 (160-291)||(12712512-12712643)
chr5 (212-311)||(30996579-30996678)
chr5 (208-338)||(32574941-32575071)
chr5 (256-429)||(7350458-7350631)
chr5 (159-319)||(38006423-38006583)
chr5 (156-287)||(10822477-10822608)
chr5 (206-311)||(4920809-4920914)
chr5 (284-419)||(16366526-16366663)
chr5 (209-290)||(28569025-28569106)
chr5 (259-311)||(10127064-10127116)
chr5 (206-290)||(20973497-20973581)
chr5 (206-355)||(24207626-24207772)
chr5 (160-291)||(12773776-12773907)
chr5 (212-311)||(15890190-15890288)
chr5 (300-362)||(457467-457529)
chr5 (206-311)||(4583102-4583207)
chr5 (250-311)||(6092563-6092624)
chr5 (250-319)||(12834619-12834688)
chr5 (206-311)||(12866552-12866657)
chr5 (277-362)||(39887173-39887258)
chr5 (263-311)||(22694959-22695007)
chr5 (259-311)||(42987533-42987585)
chr5 (206-288)||(29245952-29246034)
chr5 (250-311)||(1218738-1218799)
chr5 (206-291)||(23044992-23045077)
[»] chr3 (40 HSPs)
chr3 (209-407)||(30904819-30905016)
chr3 (165-371)||(772756-772958)
chr3 (276-429)||(27252433-27252585)
chr3 (300-367)||(37032192-37032259)
chr3 (225-311)||(48305660-48305746)
chr3 (250-311)||(44639257-44639318)
chr3 (250-311)||(52198138-52198199)
chr3 (206-295)||(53631903-53631992)
chr3 (250-310)||(23546986-23547046)
chr3 (281-332)||(42243349-42243400)
chr3 (224-290)||(34119660-34119726)
chr3 (256-362)||(40890279-40890384)
chr3 (206-295)||(4016044-4016133)
chr3 (206-311)||(44172609-44172714)
chr3 (206-311)||(44179309-44179414)
chr3 (206-375)||(3414537-3414702)
chr3 (206-310)||(34154398-34154502)
chr3 (206-305)||(7469778-7469877)
chr3 (225-338)||(3385875-3385988)
chr3 (224-285)||(29842317-29842378)
chr3 (250-291)||(31271301-31271342)
chr3 (206-291)||(39655273-39655358)
chr3 (250-311)||(39728654-39728715)
chr3 (250-291)||(44252750-44252791)
chr3 (206-290)||(4557305-4557389)
chr3 (225-288)||(23580833-23580896)
chr3 (259-310)||(31126848-31126899)
chr3 (204-311)||(49025664-49025770)
chr3 (206-288)||(10043282-10043364)
chr3 (206-288)||(48390817-48390899)
chr3 (250-311)||(22535885-22535946)
chr3 (250-291)||(29284339-29284380)
chr3 (159-216)||(29284426-29284483)
chr3 (206-311)||(49580047-49580152)
chr3 (250-291)||(54317147-54317188)
chr3 (156-192)||(1772337-1772373)
chr3 (265-309)||(2487780-2487824)
chr3 (156-216)||(10043220-10043280)
chr3 (324-368)||(14216406-14216450)
chr3 (206-310)||(44953435-44953539)
[»] chr7 (53 HSPs)
chr7 (154-407)||(23533552-23533806)
chr7 (257-431)||(3773937-3774111)
chr7 (154-375)||(19439958-19440180)
chr7 (251-429)||(3156953-3157131)
chr7 (207-371)||(4101470-4101634)
chr7 (206-367)||(43550417-43550577)
chr7 (159-303)||(24425376-24425520)
chr7 (206-355)||(29292646-29292797)
chr7 (169-375)||(23475226-23475433)
chr7 (206-343)||(8906589-8906727)
chr7 (259-429)||(11472767-11472935)
chr7 (256-429)||(37217874-37218047)
chr7 (206-311)||(16866157-16866262)
chr7 (206-288)||(10072477-10072559)
chr7 (206-296)||(26622954-26623044)
chr7 (206-291)||(18825872-18825957)
chr7 (300-425)||(31345400-31345525)
chr7 (206-291)||(32546200-32546285)
chr7 (206-310)||(35074459-35074563)
chr7 (159-290)||(3920547-3920678)
chr7 (307-405)||(6557827-6557925)
chr7 (206-311)||(27850326-27850431)
chr7 (250-310)||(45380096-45380156)
chr7 (206-285)||(3226946-3227025)
chr7 (208-291)||(31426016-31426099)
chr7 (300-375)||(36251024-36251099)
chr7 (212-295)||(48327449-48327532)
chr7 (209-295)||(16079017-16079103)
chr7 (209-290)||(5377094-5377175)
chr7 (206-291)||(12980385-12980470)
chr7 (206-311)||(17885453-17885558)
chr7 (206-291)||(18683982-18684067)
chr7 (209-286)||(25782910-25782987)
chr7 (250-311)||(30650619-30650680)
chr7 (206-311)||(38152875-38152980)
chr7 (206-311)||(41103644-41103749)
chr7 (209-305)||(10995837-10995933)
chr7 (250-310)||(18125272-18125332)
chr7 (250-310)||(21702648-21702708)
chr7 (212-311)||(43507433-43507532)
chr7 (259-305)||(7780002-7780048)
chr7 (206-291)||(2630574-2630658)
chr7 (159-216)||(17851947-17852004)
chr7 (206-291)||(22973396-22973481)
chr7 (301-362)||(24903354-24903415)
chr7 (162-291)||(28309500-28309629)
chr7 (300-377)||(40335734-40335811)
chr7 (259-291)||(17851862-17851894)
chr7 (259-311)||(37196051-37196103)
chr7 (250-290)||(37579271-37579311)
chr7 (263-291)||(44794084-44794112)
chr7 (259-311)||(45885818-45885870)
chr7 (257-361)||(48708656-48708759)
[»] scaffold0005 (1 HSPs)
scaffold0005 (206-293)||(211365-211452)
[»] scaffold0036 (1 HSPs)
scaffold0036 (206-295)||(33392-33481)
[»] scaffold0244 (1 HSPs)
scaffold0244 (225-429)||(4600-4803)
[»] scaffold0157 (1 HSPs)
scaffold0157 (256-362)||(14790-14896)
[»] scaffold1322 (1 HSPs)
scaffold1322 (300-368)||(1037-1105)
[»] scaffold0264 (1 HSPs)
scaffold0264 (250-367)||(17499-17616)
[»] scaffold0184 (1 HSPs)
scaffold0184 (209-291)||(2972-3054)
[»] scaffold0022 (1 HSPs)
scaffold0022 (206-311)||(90580-90685)
[»] scaffold0013 (2 HSPs)
scaffold0013 (250-291)||(105513-105554)
scaffold0013 (256-291)||(128171-128206)
[»] scaffold0294 (1 HSPs)
scaffold0294 (259-311)||(14758-14810)
[»] scaffold0198 (1 HSPs)
scaffold0198 (256-321)||(20789-20854)
[»] scaffold0015 (1 HSPs)
scaffold0015 (250-291)||(55941-55982)
[»] scaffold0009 (1 HSPs)
scaffold0009 (258-323)||(107443-107508)
[»] scaffold0008 (2 HSPs)
scaffold0008 (206-291)||(67752-67837)
scaffold0008 (206-291)||(75595-75680)


Alignment Details
Target: chr1 (Bit Score: 308; Significance: 1e-173; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 431
Target Start/End: Complemental strand, 39219546 - 39219122
Alignment:
Q  1 actccatgaattaattttcttccatatcttatccttgataaagctaaaagtggttttttcgcttctctgtatcatagaaagtagtatcaaatatttataa 100  Q
    ||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||      
T  39219546 actccatgaattaattttcttccatatctt------gataaagctaaaagtggttttttcgcttccctgtatcatagaaagtagtaccaaatatttatcg 39219453  T
Q  101 gtaccaagaacaacatgtacattgtgtattaaatagcaacaaaacctattaatgcgggtacccgcccaaaccaatcccaatttgacggatttccttcgct 200  Q
    ||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39219452 gtaccaagaacaacatgtacattgtgtatcaagtagcaacaaaacccattcatgcgggtacccgcccaaaccaatcccaatttgacgggtttccttcgct 39219353  T
Q  201 tttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaa 300  Q
    ||||  |||||||||||||| | |||||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||    
T  39219352 tttatcgggtttgggttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaacccatacccaaactcgttctaa 39219253  T
Q  301 atgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacact 400  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| | ||||||||||||||||    
T  39219252 atgtagaaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcatttcgctcacacagtcacagtctcattttttcatatgacact 39219153  T
Q  401 cacttatcatagttatctcatttctcctttc 431  Q
    ||||||||||||||||||| |||||||||||    
T  39219152 cacttatcatagttatctcctttctcctttc 39219122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 207 - 431
Target Start/End: Complemental strand, 36421854 - 36421630
Alignment:
Q  207 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 306  Q
    |||| |||||||||||  ||| ||||| |||||||||  | ||||||  ||||||||||||| ||||||||||  ||||||||||||||    ||| |||    
T  36421854 gggtatgggttttctccaattataaaatacgggtacgggataagtaatagggatataggtactcaccccgaacttatacccaaactcgtctcgaatatag 36421755  T
Q  307 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactta 406  Q
    ||||||||||||||| |||| ||||| ||||| |||||| ||| ||||| ||||||  ||||||||||| | ||| ||| ||||| ||| || |||||||    
T  36421754 aaaatcaatttattatccctcttatataaataaaaactcgaactctaaatcatttcattcacacagtcagagtctcaatctttcagatggcaatcactta 36421655  T
Q  407 tcatagttatctcatttctcctttc 431  Q
    |||||||| |||| |||||||||||    
T  36421654 tcatagttctctcttttctcctttc 36421630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 194 - 355
Target Start/End: Original strand, 48125671 - 48125832
Alignment:
Q  194 cttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 293  Q
    ||||| ||| |||| |||||| ||||  ||||||||||||||||||||||  ||  |||||  ||||||||||| |||||||||||||||||||||||||    
T  48125671 cttcgttttgactgagtttggatttttcctgattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaactc 48125770  T
Q  294 gttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    ||    ||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||    
T  48125771 gtcgcgaatgtagaaaatcaatttactaccgcttttatataaatagaaactcaaactctaaa 48125832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 256 - 429
Target Start/End: Original strand, 42728994 - 42729167
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    ||||||| |||| | ||||||||| ||||||||||| |||||| |||||||||||| ||||||| | |||||||||| ||||||||||| | || |||||    
T  42728994 gggatatgggtaactaccccgaactcatacccaaacacgttctgaatgtagaaaataaatttatcatcccttttatataaatagaaacttatacactaaa 42729093  T
Q  356 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
     |||||| |||||||||||| | ||| | | ||||| || |||| |||||||||||||| |||| | |||||||    
T  42729094 tcatttcactcacacagtcagagtctcagtctttcagataacacccacttatcatagttctctcttgtctcctt 42729167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 33293590 - 33293675
Alignment:
Q  276 gaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccattt 361  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||| |||||    
T  33293590 gaacccatacccaaactcgttccgaatgtagaaaatcaatttagtacccattttatatcaatagaaactcaaaccctaaatcattt 33293675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 369
Target Start/End: Complemental strand, 8880544 - 8880374
Alignment:
Q  199 cttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttct 298  Q
    |||| ||| ||||||||||||||  ||||| |||||||| ||||   ||| ||||  |||||| ||||| |||||| | |||||||||||||| ||| |     
T  8880544 ctttgacttggtttgggttttcttcgatttaaaaacacgagtacaggacaggtaatggggataaaggtatccaccctggacccatacccaaacccgtccc 8880445  T
Q  299 aaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcaca 369  Q
    |||||   ||||| ||||||||||||||||| || ||||||||||||||||  |||| |||||| ||||||    
T  8880444 aaatgctaaaaataaatttattaccccttttttataaatagaaactcaaactttaaatcatttcactcaca 8880374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 355
Target Start/End: Original strand, 43513033 - 43513178
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    ||||| |||||||| ||||| |||||||||||| ||||||||||||  ||||||||  ||  ||| | ||| ||||| ||||| ||||   |||||| ||    
T  43513033 gtttgagttttctccgattt-aaaacacgggtatgaaacaagtaacatggatatagacactaacctcaaactcatactcaaacccgtttcgaatgtaaaa 43513131  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    ||||||||||| || | ||||||| ||||||||||||||||||||||    
T  43513132 aatcaatttataactctttttatataaatagaaactcaaaccctaaa 43513178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 429
Target Start/End: Complemental strand, 13692641 - 13692510
Alignment:
Q  299 aaatgtagaaaatcaattt-attaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgac 397  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||  |||||||||| |||||| | |||||| | | | ||| | | ||||| | |||    
T  13692641 aaatgtagaaaatcaattttattatcccttttatataaatagaaaccaaaaccctaaatcatttcacccacacaattagagtcttactctttcagacgac 13692542  T
Q  398 actcacttatcatagttatctcatttctcctt 429  Q
    |||||||||| |||||| |||| |||||||||    
T  13692541 actcacttattatagttctctcttttctcctt 13692510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 29871288 - 29871390
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||||| ||||| |||||| ||||| |  ||| |||||||| |||||||||||||||| |||| ||||||||||| ||| |  |||||||||    
T  29871288 gtttgggttttctccgatttcaaaacatgggtatgggacaggtaactggtatataggtacccaccctgaactcatacccaaacccgtcccgaatgtagaa 29871387  T
Q  309 aat 311  Q
    |||    
T  29871388 aat 29871390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 411
Target Start/End: Original strand, 41477003 - 41477157
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||| |||||||||||||| |||||||||||| ||| |  || | ||||||||||||| |||||| ||||||| ||| |||||   ||||||||||     
T  41477003 ggatatatgtacccaccccgaatccatacccaaacccgtcccgaaagcagaaaatcaatttgttaccctttttatataaagagaaatggaaaccctaaat 41477102  T
Q  357 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcata 411  Q
     |||||  ||||||||||| | |||   | ||||| ||||||| |||||||||||    
T  41477103 tatttcattcacacagtcaaagtctccgtctttcagatgacacccacttatcata 41477157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 225 - 371
Target Start/End: Complemental strand, 16903593 - 16903439
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa--------tcaatt 316  Q
    ||||||||||||| |||||  | | ||||  |||||||||||||||||||||||| ||||||||||| ||| |  |||||| ||||        ||||||    
T  16903593 attttaaaacacgagtacgggataggtaatggggatataggtacccaccccgaactcatacccaaacccgtcccgaatgtaaaaaaaaaaaaaatcaatt 16903494  T
Q  317 tattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacaca 371  Q
    |||| ||| ||||||| ||||| ||||||||||||||||  ||||| ||||||||    
T  16903493 tattgccctttttatataaatataaactcaaaccctaaattatttcactcacaca 16903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 23058555 - 23058470
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||| |||||||| ||||| ||||  || |||||| ||  ||||| ||||||||||||||||||||||||||||||||||||    
T  23058555 tgggtttgagttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccaccccgaacccatacccaaac 23058470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 374
Target Start/End: Complemental strand, 23719637 - 23719524
Alignment:
Q  260 tataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccat 359  Q
    |||||||| ||| ||||||| ||||| ||||||||| |  |||||| ||| |||||||| ||||| ||||||| ||||||||||||||||  |||| |||    
T  23719637 tataggtatccatcccgaactcatactcaaactcgtcccgaatgtacaaa-tcaatttactaccctttttatataaatagaaactcaaactataaatcat 23719539  T
Q  360 ttcgctcacacagtc 374  Q
    ||| || ||||||||    
T  23719538 ttcactaacacagtc 23719524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 34673282 - 34673367
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||  |  |||| |||||||||||| || ||  ||||| || |||||||||||||||||||||||||||||||||    
T  34673282 tgggtttgggtttttcccaatttcaaaacacgggtatgagactggtaacgggtatataggtacccaccccgaacccatacccaaac 34673367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 371
Target Start/End: Original strand, 5283558 - 5283758
Alignment:
Q  171 ccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtaccc 270  Q
    |||| ||||| |||| ||||||  |||| ||| |||| |||||||| |||| |||| | |||||| | |||||  ||  ||||  |||||| | ||||||    
T  5283558 ccaaacccaaattgatggatttttttcggtttgactgagtttgggtattctttgatctcaaaacatgagtacgggacgggtaatggggatagaagtaccc 5283657  T
Q  271 accccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacac 370  Q
    ||| ||||| |||||| |||| |||    | |||||||||||||||||| | ||||||| || |||||| |||||||||  |||| |||||| |||||||    
T  5283658 acctcgaactcatacctaaacccgtctggattgtagaaaatcaatttatcatcccttttgtataaataggaactcaaactttaaatcatttctctcacac 5283757  T
Q  371 a 371  Q
    |    
T  5283758 a 5283758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 332
Target Start/End: Complemental strand, 13798324 - 13798201
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||  | ||||| |||||||||||| || |   |||||  |||||||  || ||||||| ||  |||||| |||| | | ||||||||||||    
T  13798324 gtttgggtttttcccgatttcaaaacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacctaaacccatcctaaatgtagaa 13798225  T
Q  309 aatcaatttattaccccttttata 332  Q
    ||||||||||||||||||||||||    
T  13798224 aatcaatttattaccccttttata 13798201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 362
Target Start/End: Complemental strand, 2581661 - 2581506
Alignment:
Q  204 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatg 303  Q
    |||| ||||| ||||||||||||||||||||| ||||| |  ||  ||||| ||||||||| | ||||||   |||||||||  ||||  |||  ||| |    
T  2581661 actgagtttgagttttctctgattttaaaacatgggtaagggacgggtaac-gggatatagatgcccacctacaacccatacttaaacctgtttcaaa-g 2581564  T
Q  304 tagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 362  Q
    ||||||||||||||| || || ||||||| |||||||||||||||| ||||| ||||||    
T  2581563 tagaaaatcaatttaatatcc-ttttatataaatagaaactcaaactctaaatcatttc 2581506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 44615478 - 44615560
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||| ||||||| |||||||||||| |  ||  ||||| || ||||||||||||||||| ||| |||||||||||    
T  44615478 gtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaac 44615560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 44793091 - 44793009
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||| ||||||| |||||||||||| |  ||  ||||| || ||||||||||||||||| ||| |||||||||||    
T  44793091 gtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaac 44793009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 17135036 - 17134947
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 295  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||  ||||| || |||||||||||  ||||||||||||||||| ||||||    
T  17135036 tgggtatgggttttccccgatttcaaaacacgggtatgagacgggtaacgggtatataggtaccatccccgaacccatacccatactcgt 17134947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 19572512 - 19572617
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||  | ||||| |||||||||||| |  ||| ||||| || ||||||||||||||||||||||||||| || || ||| | |||||||    
T  19572512 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgta 19572611  T
Q  306 gaaaat 311  Q
     |||||    
T  19572612 aaaaat 19572617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 24236761 - 24236866
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| | |||  | ||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  24236761 tgggtatgggttttccccgatctcaaaacacgggtatggaacggggaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 24236860  T
Q  306 gaaaat 311  Q
     |||||    
T  24236861 aaaaat 24236866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 29936461 - 29936400
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  29936461 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 29936400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 34085280 - 34085219
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| ||| |||| |||||||||||||||||||||||| |||||| ||||||||| |||||    
T  34085280 gtaacggggttatatgtacccaccccgaacccatacccatactcgtcctaaatgtaaaaaat 34085219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 50426661 - 50426742
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 287  Q
    ||||| |||| |||| ||||||| |||||||||||| || ||   |||| || |||||||||||||||||||||||||||||    
T  50426661 tgggtatgggctttccctgatttcaaaacacgggtatgagacggataacgggtatataggtacccaccccgaacccataccc 50426742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 12495055 - 12494995
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||| ||||||||||||||||| ||| | ||||||||||||    
T  12495055 gtaacgggtatataggtacccacctcgaacccatacccaaacccgtcccaaatgtagaaaa 12494995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 28297979 - 28297919
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  28297979 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 28297919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 429
Target Start/End: Original strand, 45460143 - 45460267
Alignment:
Q  307 aaaatcaatttattacccctttt-atagaaatagaaactcaaaccc-taaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcact 404  Q
    |||||||  |||||||||||||| ||| ||||||||||  |||||| |||| |||||| |||||||| || || | | ||| ||||| ||||||||||||    
T  45460143 aaaatcacgttattacccctttttatataaatagaaacataaacccctaaatcatttcactcacacaatcgcagtttcaatctttcagatgacactcact 45460242  T
Q  405 tatcatagttatctcatttctcctt 429  Q
    |||| || || |||| |||||||||    
T  45460243 tatcgtaattttctcttttctcctt 45460267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 331
Target Start/End: Original strand, 25154845 - 25154952
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 323  Q
    ||||| |||||||| |||||  || |||||  |||||||| ||||||||  ||||| ||| ||||||| ||| || ||| ||||||||||||| | ||||    
T  25154845 gatttcaaaacacgagtacgggacgagtaatggggatataagtacccacttcgaactcatgcccaaacccgtcctgaatttagaaaatcaattcactacc 25154944  T
Q  324 ccttttat 331  Q
    ||||||||    
T  25154945 ccttttat 25154952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 36187220 - 36187319
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||||||||| |||||||||||||||| ||| | |||||||    
T  36187220 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaacccatacccaaacccgtcccaaatgta 36187319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 362
Target Start/End: Original strand, 47644908 - 47645015
Alignment:
Q  255 tgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaa 354  Q
    ||||||| | ||||| ||||||||| |||| ||| |||||| |  |||||| || |  ||||||||| |||||||||| ||||||||||||| | |||||    
T  47644908 tgggatagaagtacctaccccgaactcatatccatactcgtcccgaatgtaaaataataatttattatcccttttatataaatagaaactcagatcctaa 47645007  T
Q  355 accatttc 362  Q
    | ||||||    
T  47645008 atcatttc 47645015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 5293490 - 5293576
Alignment:
Q  286 ccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacag 372  Q
    |||||||||| |  ||||| |||| ||||||||||| | |||||||| |||||||||||||||| | |||| |||||  ||||||||    
T  5293490 ccaaactcgtcccgaatgttgaaagtcaatttattatcacttttatataaatagaaactcaaactcaaaactatttcaatcacacag 5293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 42439713 - 42439775
Alignment:
Q  249 agtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    |||||| || |||||||||||||||||||||||||| |||||||| | | ||||||| |||||    
T  42439713 agtaacgggtatataggtacccaccccgaacccatatccaaactcatcccaaatgtaaaaaat 42439775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 23490815 - 23490884
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 319  Q
    ||||| || |||||||||||||||||||||||||||| |||| ||| | ||||||| ||||  |||||||    
T  23490815 gtaacgggtatataggtacccaccccgaacccataccaaaacccgtcccaaatgtaaaaaactaatttat 23490884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 9982943 - 9982975
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||||||||||||||||||||||    
T  9982943 atataggtacccaccccgaacccatacccaaac 9982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 49741060 - 49741092
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||||||||||||||||||||||    
T  49741060 atataggtacccaccccgaacccatacccaaac 49741092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 51421894 - 51421842
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| ||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  51421894 atatatgtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 51421842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 34611138 - 34611063
Alignment:
Q  230 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    |||||||||||| |  ||| |||||  | |||||||||| |||||||||||||||||||||| ||| | |||||||    
T  34611138 aaaacacgggtatgggacatgtaacgtgtatataggtactcaccccgaacccatacccaaacccgtcccaaatgta 34611063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 10450078 - 10450144
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||| |||||||||   |  ||||| |||||||| ||||||||||||||| |||||||||||    
T  10450078 attttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcatacccaaac 10450144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 35069892 - 35069974
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| |||||| | ||||| | || |||||||| | ||  ||||| |||||||| ||||||||||||||||||||| |||||    
T  35069892 gtttgagttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccatactcaaac 35069974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 45866185 - 45866267
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||| ||||   | ||||||||||||||||| ||| ||||||||    
T  45866185 tgggtatgggttttccccgatttcaaaacacgggtatgagacaggtaatgagtatataggtacccaccccaaactcataccca 45866267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 3627983 - 3628064
Alignment:
Q  204 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 285  Q
    ||||||| | ||||||| | ||||| |||||||||||| |  ||  ||||| || || ||||||||||||||||||||||||    
T  3627983 actgggtataggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccatac 3628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 16409031 - 16408926
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| |  |||| |||||||||||| |  ||  ||||| || ||||||||||| |||||||||||||| | |||| || || |||||||    
T  16409031 tgggtatgggttttccccaatttcaaaacacgggtatgggacgggtaacaggtatataggtaccgaccccgaacccatagctaaacccgctccaaatgta 16408932  T
Q  306 gaaaat 311  Q
     |||||    
T  16408931 aaaaat 16408926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 18354080 - 18354185
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||| ||||| |  ||  ||||| || ||||| || ||||||||||||| ||||||| |||||| | |||||||    
T  18354080 tgggtatgggttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataagttcccaccccgaaccgatacccatactcgtcccaaatgta 18354179  T
Q  306 gaaaat 311  Q
     |||||    
T  18354180 aaaaat 18354185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 20774714 - 20774657
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 216  Q
    ||||||||| |||||| ||||||||||||||||| |  || ||| |||||||||||||    
T  20774714 tacccgcccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggt 20774657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 10450015 - 10450047
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacgg 188  Q
    ||||||||||||||||||| |||||||||||||    
T  10450015 gggtacccgcccaaaccaaccccaatttgacgg 10450047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 13390449 - 13390397
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||||||||||||||| |||||||| || ||| | ||||||| |||||    
T  13390449 atataggtacccaccccgaactcatacccatacccgtcccaaatgtaaaaaat 13390397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 291
Target Start/End: Original strand, 16433130 - 16433249
Alignment:
Q  169 aaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtac 268  Q
    |||||| | ||||||||||||||| |  |  ||| | |||||||| |||||||| ||||| |||||||||||| |  ||  ||||| |  ||||||||||    
T  16433130 aaccaaactcaatttgacggattttccccattttgattgggtttgagttttctccgatttcaaaacacgggtatgggacgggtaacggatatataggtac 16433229  T
Q  269 ccaccccgaacccatacccaaac 291  Q
       ||||||||||||||||||||    
T  16433230 ---ccccgaacccatacccaaac 16433249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 23966918 - 23966858
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||| || || ||| | ||||||| ||||    
T  23966918 gtaacgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaa 23966858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 209 - 429
Target Start/End: Original strand, 21956818 - 21957037
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    ||||||||||| || |||||||||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||||||||||||   |||||||||    
T  21956818 gtttgggttttttccgattttaaaacacgggtacggaatgagtaacggggatataggtgcccaccccgaacccatacccaaactcgttacgaatgtagaa 21956917  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 408  Q
    ||||||||||||| |||||||||| ||||| |||| ||||||||||| ||||||  || |||||||| | | | | | ||| | |||||||||| |||||    
T  21956918 aatcaatttatta-cccttttatataaataaaaacccaaaccctaaatcatttcattcgcacagtcagagtgtcagtcttttagatgacactcatttatc 21957016  T
Q  409 atagttatctcatttctcctt 429  Q
    |||||||| || |||||||||    
T  21957017 atagttatatcttttctcctt 21957037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 215 - 429
Target Start/End: Complemental strand, 42907971 - 42907758
Alignment:
Q  215 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaa 314  Q
    |||||||| || || ||||||||| ||||  || |||||  |||||||||||||||||||||| ||||||||||||||||| |  |||||||||||||||    
T  42907971 gttttctccgaattcaaaacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaactcgtcccgaatgtagaaaatcaa 42907872  T
Q  315 tttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 414  Q
    |||| || | |||||||| |||||||||||||||||||||| |||||| |||| ||||| | | ||| | | ||||| ||||||| ||||||||||||||    
T  42907871 tttacta-ctcttttatataaatagaaactcaaaccctaaatcatttcactcatacagttagagtcttagtctttcagatgacacacacttatcatagtt 42907773  T
Q  415 atctcatttctcctt 429  Q
     | || |||||||||    
T  42907772 ctatcttttctcctt 42907758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 256 - 429
Target Start/End: Original strand, 8843856 - 8844028
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    ||||||||| ||||||||| |||| ||||||||||| |||  | |||||||||||| |||||||||||||||| ||| ||||||||||| ||| ||||||    
T  8843856 gggatatagatacccaccc-gaactcatacccaaacccgtcgtgaatgtagaaaattaatttattacccctttcatataaatagaaacttaaatcctaaa 8843954  T
Q  356 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
     |||||| |||||||||||||| ||| |   ||||| |||||||||||||||||||||| |||| |||||||||    
T  8843955 tcatttcactcacacagtcacagtcttagactttcagatgacactcacttatcatagttctctcttttctcctt 8844028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 256 - 429
Target Start/End: Original strand, 8856820 - 8856992
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    ||||||||| ||||||||| |||| ||||||||||| |||  | |||||||||||| |||||||||||||||| ||| ||||||||||| ||| ||||||    
T  8856820 gggatatagatacccaccc-gaactcatacccaaacccgtcgtgaatgtagaaaattaatttattacccctttcatataaatagaaacttaaatcctaaa 8856918  T
Q  356 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
     |||||| |||||||||||||| ||| |   ||||| |||||||||||||||||||||| |||| |||||||||    
T  8856919 tcatttcactcacacagtcacagtcttagactttcagatgacactcacttatcatagttctctcttttctcctt 8856992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 230 - 429
Target Start/End: Original strand, 33516097 - 33516297
Alignment:
Q  230 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacccctttt 329  Q
    ||||||||||||||| |   ||||| |||||||| |||||||||||||||| |||||||||| |||   ||||||| ||||||||| |||||||||||||    
T  33516097 aaaacacgggtacgagatgggtaacagggatataagtacccaccccgaacctatacccaaacccgtctcaaatgtaaaaaatcaatgtattacccctttt 33516196  T
Q  330 atagaaatagaaactcaaaccctaaaccatttcgctcaca-cagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcct 428  Q
    ||| ||||| |||||||||||||||| |||||| |||||| | || | | |||   | ||||| ||||||||||||||||||| || |||| ||||||||    
T  33516197 atataaataaaaactcaaaccctaaatcatttcactcacacccgttagagtcttggtctttcagatgacactcacttatcataattctctcttttctcct 33516296  T
Q  429 t 429  Q
    |    
T  33516297 t 33516297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 300 - 427
Target Start/End: Original strand, 33616210 - 33616337
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 399  Q
    ||||||||||||||||||||||||||||||||| ||||| |||   |||||||||| |||||| |||||||||||| | ||| ||| |||||||||||||    
T  33616210 aatgtagaaaatcaatttattaccccttttatataaataaaaatcaaaaccctaaatcatttcactcacacagtcagagtcttaatatttcatatgacac 33616309  T
Q  400 tcacttatcatagttatctcatttctcc 427  Q
    ||||||||||||||| |||| |||||||    
T  33616310 tcacttatcatagttctctcttttctcc 33616337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 209 - 414
Target Start/End: Complemental strand, 25941229 - 25941024
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||  | ||||| ||||||||||||||  ||| ||||| || | |||||||||||||||||||||||||||||||  ||     ||||||||    
T  25941229 gtttgggtttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaacatgtctcggatgtagaa 25941130  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 408  Q
    ||||||||||| |||||||||||| |||||||||| |||  |||||| || ||| |||||||  ||| | ||| | | ||||| |||||| |||||||||    
T  25941129 aatcaatttataaccccttttatataaatagaaacccaaggcctaaatcaattcactcacacgatcatagtcttagtctttcagatgacattcacttatc 25941030  T
Q  409 atagtt 414  Q
    ||||||    
T  25941029 atagtt 25941024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 257 - 373
Target Start/End: Complemental strand, 36919166 - 36919050
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||||||| ||| ||  |||||||||||||||||||||   ||||||||||||| ||||||||| |||||||| |||||||||||||||| |||||     
T  36919166 ggatataggtatccatccttaacccatacccaaactcgttccggatgtagaaaatcagtttattaccacttttatataaatagaaactcaaactctaaat 36919067  T
Q  357 catttcgctcacacagt 373  Q
    |||||| ||||||||||    
T  36919066 catttcactcacacagt 36919050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 251 - 414
Target Start/End: Original strand, 4741262 - 4741424
Alignment:
Q  251 taactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaacc 350  Q
    |||| |||||||| |||||||||||||||||||||  |||| |||||  |||||| ||| ||||||||||| || ||||||| |||||||||||||||||    
T  4741262 taacagggatataagtacccaccccgaacccatacaaaaacccgttccgaatgtataaa-tcaatttattatccattttatataaatagaaactcaaacc 4741360  T
Q  351 ctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 414  Q
    ||||| | || | |||||||| ||| | ||| ||||| ||| ||||||||||||| ||| ||||    
T  4741361 ctaaatcgttcctctcacacaatcatagtctcaatttctcagatgacactcacttctcaaagtt 4741424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 260 - 431
Target Start/End: Original strand, 21714030 - 21714201
Alignment:
Q  260 tataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccat 359  Q
    |||| ||||||||||  ||| |||||| ||||||||   ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |||    
T  21714030 tatatgtacccaccctaaactcatacctaaactcgtctcaaatgtagaaaattaatttattacctcttttatataaatagaaactcaaaccctaaatcat 21714129  T
Q  360 ttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctttc 431  Q
    ||| || ||||| | | | ||| | | | ||| ||||||||||||| |||||||| |||| |||||| ||||    
T  21714130 ttcacttacacaattagagtctcagtctctcaaatgacactcacttctcatagttctctcttttctcttttc 21714201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 367
Target Start/End: Original strand, 25298806 - 25298994
Alignment:
Q  178 caatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccga 277  Q
    |||||||||||||||    | |||| ||||||||||||||||  | ||||| ||||||||||||||  |   ||||  ||||||||| |  |||||||||    
T  25298806 caatttgacggatttttcccactttgactgggtttgggtttttccggatttcaaaacacgggtacgggatgggtaatggggatatagctgtccaccccga 25298905  T
Q  278 acccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctca 367  Q
    |||||||||||||| ||| | |||||| |||||||||||||| ||||||||| || |||||| ||||||||| ||||| |||||| ||||    
T  25298906 acccatacccaaacccgtaccaaatgttgaaaatcaatttatcaccccttttttataaatag-aactcaaactctaaatcatttcactca 25298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 225 - 429
Target Start/End: Original strand, 12075651 - 12075855
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 324  Q
    |||| ||||||||||||||  ||| ||||  |||| ||| ||||||||||| ||| | ||| ||||||||| |  |||||||||||||||||||||||||    
T  12075651 atttcaaaacacgggtacgtgacaggtaatagggagatatgtacccaccccaaactcgtactcaaactcgtccggaatgtagaaaatcaatttattaccc 12075750  T
Q  325 cttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttc 424  Q
     ||||||| ||||||||||| |||| || || |||||| | |||||||| | | | | | ||||| | ||||||  ||||||| |||||| |||| ||||    
T  12075751 attttatataaatagaaactaaaactctgaatcatttcacccacacagttagagtttcagttttttagatgacatccacttattatagttctctcttttc 12075850  T
Q  425 tcctt 429  Q
    |||||    
T  12075851 tcctt 12075855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 206 - 362
Target Start/End: Original strand, 35304517 - 35304673
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttcta-aatgt 304  Q
    |||||||||||||||||| |||||||||||   |||||  ||  ||||| |||||||||||||| ||||| ||| ||||||||||||| |   | |||||    
T  35304517 tgggtttgggttttctctaattttaaaacataagtacgggacgggtaacggggatataggtacctaccccaaactcatacccaaactcatcaaagaatgt 35304616  T
Q  305 agaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 362  Q
    || |||||||||||||| |||||||||| ||| |||||||||||| ||||| ||||||    
T  35304617 aggaaatcaatttatta-cccttttatataaaaagaaactcaaactctaaatcatttc 35304673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 293
Target Start/End: Original strand, 14605926 - 14606013
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 293  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||  ||||| |||||||| |||||||||||||||||||||||||||||    
T  14605926 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactc 14606013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 223 - 429
Target Start/End: Complemental strand, 37926636 - 37926432
Alignment:
Q  223 tgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattac 322  Q
    ||||||||||||| |||||| | ||||||||| |||||||| ||||||   | |||||||||||||||||| | || ||||||| |||| |||||||||     
T  37926636 tgattttaaaacatgggtaccagacaagtaacagggatataagtacccggtctgaacccatacccaaactcatcctgaatgtagtaaattaatttattat 37926537  T
Q  323 cccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatt 422  Q
    |||||| |||  ||| |||||||||||  |||| |||||  |||||||||| | | ||| | | |||   |||||| ||||||||||||||| |||  ||    
T  37926536 ccctttcatatcaattgaaactcaaactttaaatcatttaactcacacagttaaagtctcagtcttt--gatgacagtcacttatcatagttctctattt 37926439  T
Q  423 tctcctt 429  Q
    |||||||    
T  37926438 tctcctt 37926432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 303 - 414
Target Start/End: Complemental strand, 39086152 - 39086042
Alignment:
Q  303 gtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactca 402  Q
    |||||||||||||||| ||||  ||||||| ||||||||||| |||||||||| |||||| |||||||||||| | ||| | ||||||| |||||||| |    
T  39086152 gtagaaaatcaatttactacct-ttttatataaatagaaacttaaaccctaaatcatttcactcacacagtcagactctcagtttttcagatgacactta 39086054  T
Q  403 cttatcatagtt 414  Q
    ||||||||||||    
T  39086053 cttatcatagtt 39086042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 429
Target Start/End: Original strand, 9280943 - 9281113
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacca 358  Q
    ||||||||||||||||||||| ||||| |||||| || || ||| |||||||| ||||||||| |||||||||| | ||||||| |||||||||||| ||    
T  9280943 atataggtacccaccccgaactcatactcaaacttgtcctgaatatagaaaataaatttattatcccttttatatagatagaaattcaaaccctaaatca 9281042  T
Q  359 tttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
    || |  | ||| | | | | ||| ||| ||||| || ||| ||||||||||||||  |||| |||||||||    
T  9281043 ttacattgacaaaattagagtctcaatctttcagataacattcacttatcatagtactctcttttctcctt 9281113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 375
Target Start/End: Original strand, 9929219 - 9929337
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||||||||||||||||||| | |||||||| |||| || || ||||||||||||||||||||| |||  ||| ||||| ||||| |||| |||||     
T  9929219 ggatataggtacccaccccgaactcttacccaaaatcgtcctgaaagtagaaaatcaatttattacctcttccatataaatataaactgaaactctaaat 9929318  T
Q  357 catttcgctcacacagtca 375  Q
     ||||| ||||||||||||    
T  9929319 aatttcactcacacagtca 9929337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 362
Target Start/End: Complemental strand, 16575155 - 16575050
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||| |||||||| ||||||| ||||||||||||||  |||||||| ||||| |||||||||||| ||| ||| ||||||||||||||| | ||||     
T  16575155 ggatataagtacccactccgaacctatacccaaactcgtcttaaatgtaaaaaattaatttattacccttttaatataaatagaaactcaaatcataaat 16575056  T
Q  357 catttc 362  Q
    ||||||    
T  16575055 catttc 16575050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 25265242 - 25265370
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 399  Q
    |||||||||||||||||||||| || || |||| |||||||||||||||  ||||| |||||  |||||||| ||| | ||| ||||||||| ||||||     
T  25265242 aatgtagaaaatcaatttattatcc-ttctatataaatagaaactcaaattctaaatcattttactcacacaatcagagtctcaatttttcagatgacag 25265340  T
Q  400 tcacttatcatagttatctcatttctcctt 429  Q
    || |||||||||||| |||| |||||||||    
T  25265341 tcgcttatcatagttctctcttttctcctt 25265370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 342
Target Start/End: Complemental strand, 36306875 - 36306743
Alignment:
Q  210 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 309  Q
    ||||| ||||||| ||||| |||||||||||| || ||   |||| |||||||||||||| | |||||| | | || ||||| ||| |  ||||||||||    
T  36306875 tttggattttctccgatttcaaaacacgggtatgagacggttaacggggatataggtacctaacccgaagctacactcaaacccgtcccgaatgtagaaa 36306776  T
Q  310 atcaatttattaccccttttatagaaatagaaa 342  Q
    ||||||||||||||||||||||| |||||||||    
T  36306775 atcaatttattaccccttttatataaatagaaa 36306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 29527956 - 29527821
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 255  Q
    |||||||||||||||||||   | ||||||||| ||| |  |||||| |  |||||||||||||| | ||||| |||| |||||||||  ||  |||||     
T  29527956 gggtacccgcccaaaccaacttcgatttgacgggttttccccgctttgatagggtttgggttttccccgatttcaaaatacgggtacgtgacgggtaacg 29527857  T
Q  256 gggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||| |||||||||||||||||||||||||||    
T  29527856 gggatatatgtacccaccccgaacccatacccaaac 29527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 30266281 - 30266416
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 255  Q
    ||||||||||||||||||| ||| ||||||||| ||| || || ||| ||||||||||| |||| || ||||| | || ||||||||   ||  |||||     
T  30266281 gggtacccgcccaaaccaaccccgatttgacgggttttctccgatttgactgggtttggtttttttccgatttcataatacgggtacaggacgggtaacg 30266380  T
Q  256 gggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||| ||| |||||||||||||||||||||||    
T  30266381 gggatatatgtatccaccccgaacccatacccaaac 30266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 30285907 - 30285772
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 255  Q
    ||||||||||||||||||| ||| ||||||||| ||| || || ||| ||||||||||| |||| || ||||| | || ||||||||   ||  |||||     
T  30285907 gggtacccgcccaaaccaaccccgatttgacgggttttctccgatttgactgggtttggtttttttccgatttcataatacgggtacaggacgggtaacg 30285808  T
Q  256 gggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||| ||| |||||||||||||||||||||||    
T  30285807 gggatatatgtatccaccccgaacccatacccaaac 30285772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 370
Target Start/End: Complemental strand, 37384357 - 37384203
Alignment:
Q  215 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaa 314  Q
    ||||||||  |||||||||||||||||||  ||| | |||  |||||||   | ||||||| ||||||||| ||||| ||| | |||| |||||| ||||    
T  37384357 gttttctccaattttaaaacacgggtacgtgacatgcaacgaggatatattcatccaccccaaacccatacacaaacccgtcccaaatatagaaa-tcaa 37384259  T
Q  315 tttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacac 370  Q
    ||||||| |||||||||| ||||||||  |||||||||||| |||||| |||||||    
T  37384258 tttattatcccttttatataaatagaagttcaaaccctaaatcatttcactcacac 37384203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 17113098 - 17113226
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 399  Q
    ||||||||||||||||||||||| | ||| ||| ||||| |||| |||| | |||| |||||| ||| || ||||| | ||| | | ||||| |||||||    
T  17113098 aatgtagaaaatcaatttattactc-tttcatataaataaaaacccaaatcttaaatcatttcactcccaaagtcagagtctcagtctttcagatgacac 17113196  T
Q  400 tcacttatcatagttatctcatttctcctt 429  Q
    |||||||||||||||||||| ||| |||||    
T  17113197 tcacttatcatagttatctcttttttcctt 17113226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 19883060 - 19883169
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||| | ||||||||||||||| ||||  |   ||||| |||||||||||| |||||||||||| |||| ||||||||| |  |||||| ||    
T  19883060 gtttgggttttccccgattttaaaacacggatacgggaagggtaacggggatataggtatccaccccgaaccgatacacaaactcgtcccgaatgtataa 19883159  T
Q  309 aatcaattta 318  Q
    ||||||||||    
T  19883160 aatcaattta 19883169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 3505343 - 3505163
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 324  Q
    ||||||||| | |||||||||||  || || ||||||||||||| ||||| |||   |||| |||||  ||||   || ||||||||||||||||||| |    
T  3505343 attttaaaatatgggtacgaaacgggttacggggatataggtactcaccctgaatatatacacaaacctgttccgcatatagaaaatcaatttattactc 3505244  T
Q  325 cttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactt 405  Q
    |||||||  ||||||||| |||||| ||| | ||||||  |||||| || | | ||| ||| | |||||||||||||||||    
T  3505243 cttttatctaaatagaaattcaaactctagatcatttcattcacaccgttagagtctcaatctctcatatgacactcactt 3505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 6382273 - 6382377
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||||| ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  6382273 tgggtatgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 6382372  T
Q  306 gaaaa 310  Q
     ||||    
T  6382373 aaaaa 6382377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 31782709 - 31782622
Alignment:
Q  204 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||||| | ||||| |||| |||||||||  ||| ||||| |||||||| ||||||||||| ||| |||||||||||    
T  31782709 actgggtttgggttttccccgatttcaaaatacgggtacggtacaggtaacggggatatatgtacccaccccaaactcatacccaaac 31782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 373
Target Start/End: Original strand, 7334260 - 7334351
Alignment:
Q  280 ccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagt 373  Q
    ||||| |||||||||| | |||||| |||||||||||||||| |  |||||||  ||||||||||||||| ||||| |||||| ||||||||||    
T  7334260 ccatatccaaactcgtcccaaatgttgaaaatcaatttattatcgtttttata--aatagaaactcaaactctaaatcatttcactcacacagt 7334351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 12505581 - 12505687
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||  |||||||||| |||| ||||||||||| ||| || || ||| || ||||||||||| ||||||||||| ||||||||||| ||||  ||||    
T  12505581 gggatattagtacccaccctgaactcatacccaaacccgtcctgaaggtaaaacatcaatttatttccccttttatataaatagaaacttaaacattaaa 12505680  T
Q  356 ccatttc 362  Q
     ||||||    
T  12505681 tcatttc 12505687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 429
Target Start/End: Complemental strand, 30034667 - 30034545
Alignment:
Q  307 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactta 406  Q
    |||||||||||| |||| | |||||| |||||||||| ||||||||||| |||||| |||| | ||| | | ||  ||| |||||  |||||||| ||||    
T  30034667 aaaatcaatttactacctcatttatataaatagaaacccaaaccctaaatcatttcactcataaagtgagagtcacaatctttcaagtgacactcgctta 30034568  T
Q  407 tcatagttatctcatttctcctt 429  Q
    |||||||| |||| |||||||||    
T  30034567 tcatagttttctcttttctcctt 30034545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 305
Target Start/End: Complemental strand, 32585633 - 32585484
Alignment:
Q  162 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt------tttctctgattttaaaacacgggtacgaaacaagtaact 255  Q
    ||||||||||||| ||||||||||| | ||| |  |  ||| |||||||||||||      |||||| ||||| |||||||||||| |  ||| |||||     
T  32585633 ccgcccaaaccaaacccaatttgaccggttttcccctttttgactgggtttgggtatgaattttctccgatttcaaaacacgggtatgggacaggtaacg 32585534  T
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    || |||||||||||||||| |||||||||||||||| ||| | |||||||    
T  32585533 ggtatataggtacccaccctgaacccatacccaaacccgtcccaaatgta 32585484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 31752550 - 31752445
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||||||||| || || ||||||  | |||||||| ||||||||||||||||||||| || ||| | |||||||    
T  31752550 tgggtatgggttttccccgatttcaaaacacgggtatgagacgagtaacgagtatataggttcccaccccgaacccatacccatacccgtcccaaatgta 31752451  T
Q  306 gaaaat 311  Q
     |||||    
T  31752450 aaaaat 31752445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 362
Target Start/End: Original strand, 43351419 - 43351532
Alignment:
Q  249 agtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaa 348  Q
    |||||| | ||||||| |||| |||||||||||||| ||||| || |   ||||||  ||||||||||||||||| |||||| | ||||| |||||||||    
T  43351419 agtaacagagatatagatacctaccccgaacccatatccaaattcatctcaaatgtgaaaaatcaatttattacctcttttacataaataaaaactcaaa 43351518  T
Q  349 ccctaaaccatttc 362  Q
    |||| || ||||||    
T  43351519 ccctgaatcatttc 43351532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 10574370 - 10574505
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 255  Q
    ||||||||||||||| ||||||| ||||||||| ||| |  || ||| ||||||||||  ||||| | ||||| | || || ||||||  ||  |||||     
T  10574370 gggtacccgcccaaatcaatcccgatttgacgggttttccccgatttgactgggtttgaattttccccgatttcataatacaggtacgggacgggtaacg 10574469  T
Q  256 gggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||| |||||| |||||||| |||||||||||    
T  10574470 gggatatatgtacccgccccgaactcatacccaaac 10574505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 343
Target Start/End: Complemental strand, 10302178 - 10302040
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||||| ||||||| | ||||| |||  ||||||| || ||  ||||| ||| |||| |||||||||||||||||||||||| |  ||| | |||||||    
T  10302178 tgggtttaggttttccccgatttcaaagtacgggtatgagacgggtaacggggttatatgtacccaccccgaacccatacccatatccgtcccaaatgta 10302079  T
Q  306 gaaaatcaatttattacc-ccttttatagaaatagaaac 343  Q
     ||||| | ||| ||||| ||||||||| ||||||||||    
T  10302078 aaaaattacttttttaccaccttttatataaatagaaac 10302040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 1724311 - 1724396
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||  ||||| |  |||||||||||||||||||||||||||||||||    
T  1724311 tgggtttgggttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaac 1724396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 6482036 - 6482121
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||| |  |||| |||||||||||| |  || |||||  || ||||| |||||||||||||||||||||||||||    
T  6482036 tgggtttgggttttccccaatttaaaaacacgggtatgggacgagtaaagggtatatatgtacccaccccgaacccatacccaaac 6482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 21544673 - 21544588
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||| ||||  | ||||| |||| |||||||||  ||| ||||  |||||||| |||||||||||||||||||||||||||    
T  21544673 tgggtttggatttttcccgatttcaaaatacgggtacgggacaggtaatggggatatatgtacccaccccgaacccatacccaaac 21544588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 40420680 - 40420741
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccattt 361  Q
    |||||||||||||| |||||||||||||||||| ||||||||||  |||||| ||| |||||    
T  40420680 aatgtagaaaatcactttattaccccttttatataaatagaaaccaaaaccccaaatcattt 40420741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 47550398 - 47550459
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  47550398 gtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 47550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 55783543 - 55783442
Alignment:
Q  261 ataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatt 360  Q
    ||||||||  || ||||||||||||  ||||| || | |||| |||||||||| || |||||| ||||||||  |||||||||||||| |||||| ||||    
T  55783543 ataggtacgtactccgaacccatacttaaacttgtcccaaatatagaaaatcacttcattacctcttttatatgaatagaaactcaaatcctaaatcatt 55783444  T
Q  361 tc 362  Q
    ||    
T  55783443 tc 55783442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 55847725 - 55847624
Alignment:
Q  261 ataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatt 360  Q
    ||||||||  || ||||||||||||  ||||| || | |||| |||||||||| || |||||| ||||||||  |||||||||||||| |||||| ||||    
T  55847725 ataggtacgtactccgaacccatacttaaacttgtcccaaatatagaaaatcacttcattacctcttttatatgaatagaaactcaaatcctaaatcatt 55847626  T
Q  361 tc 362  Q
    ||    
T  55847625 tc 55847624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 5902659 - 5902719
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  5902659 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 5902719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 7609020 - 7608960
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  7609020 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 7608960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 11122870 - 11122974
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||||| ||| |  ||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  11122870 tgggtatgggttttctccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 11122969  T
Q  306 gaaaa 310  Q
     ||||    
T  11122970 aaaaa 11122974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 44317585 - 44317525
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  44317585 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 44317525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 48459569 - 48459493
Alignment:
Q  212 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||||||| | ||||| |||||| ||||| | |||  ||||| || ||||||||||||||||||||||||||||||    
T  48459569 tgggttttccccgatttcaaaacatgggtatggaacgggtaacaggtatataggtacccaccccgaacccataccca 48459493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 43553477 - 43553414
Alignment:
Q  269 ccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata 332  Q
    ||||||||||| |||| | |||||||| |  ||||| |||||||||||||||||||||||||||    
T  43553477 ccaccccgaactcatatcgaaactcgtcccgaatgttgaaaatcaatttattaccccttttata 43553414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 3516402 - 3516348
Alignment:
Q  215 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacc 269  Q
    |||||||| ||||| |||||||||||||||||| |||||| | ||||||||||||    
T  3516402 gttttctccgatttcaaaacacgggtacgaaacgagtaacagtgatataggtacc 3516348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 426
Target Start/End: Original strand, 23927693 - 23927859
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||||||| ||||||||||||| |||||||||||  |||  |  |||||||| ||||||||||| ||||  || ||||  |||  |||||| ||||     
T  23927693 ggatataggtatccaccccgaacccctacccaaactc-atctcgaattagaaaattaatttattacctctttattataaat--aaatccaaaccataaat 23927789  T
Q  357 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctc 426  Q
     ||||| |||||||| | | ||||| ||||||||  |||||| ||||||| |||| || |||| ||||||    
T  23927790 aatttcactcacacacttagaatctcaatttttcggatgacaatcacttaacataattctctcttttctc 23927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 11028167 - 11028082
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||| |||||||||||    
T  11028167 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaactcatacccaaac 11028082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 15987263 - 15987348
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| || |||||| | |||||||||||||||||| |  |   ||||| || |||||| ||||||||||||||||||||||||||    
T  15987263 tgggtatgagttttcccagattttaaaacacgggtatgggatgggtaacgggtatatagatacccaccccgaacccatacccaaac 15987348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 47103832 - 47103747
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||| |  |||| |||| |||||||||   |  |||||  ||||||| |||||||||||||||||||||||||||    
T  47103832 tgggtttgggttttccccaatttcaaaatacgggtacggggcgggtaacgcggatatatgtacccaccccgaacccatacccaaac 47103747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 53906350 - 53906411
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || |||||||||||||||||||||||||| | |||||||| | ||||||| |||||    
T  53906350 gtaacaggtatataggtacccaccccgaacccatatctaaactcgtcccaaatgtaaaaaat 53906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 26564881 - 26564821
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||| | ||||| ||||||    
T  26564881 gtaacgggtatataggtacccaccccgaaaccatacccaaacccgtcccaaatgcagaaaa 26564821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 50376425 - 50376501
Alignment:
Q  279 cccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||| |||| ||| |||||  |||||||||||||||||||||  || ||||||| ||||||||||| |||| |||||    
T  50376425 cccacacccgaacccgttccgaatgtagaaaatcaatttattttccattttatataaatagaaactaaaacgctaaa 50376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 55826668 - 55826728
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || |||||||||||||||||||||||||| |||||| ||| | ||||||| ||||    
T  55826668 gtaacgggtatataggtacccaccccgaacccatatccaaacccgtcccaaatgtaaaaaa 55826728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 291
Target Start/End: Complemental strand, 568461 - 568426
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||| |||||||||||||||||||||||||||    
T  568461 gggatatatgtacccaccccgaacccatacccaaac 568426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 3514176 - 3514105
Alignment:
Q  265 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaa 336  Q
    |||||||||| |||| ||||| ||||| ||| |  ||| ||||||||||| ||||||| |||||||||||||    
T  3514176 gtacccaccctgaacacatacacaaacccgtccagaatatagaaaatcaaattattactccttttatagaaa 3514105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 21423930 - 21423851
Alignment:
Q  231 aaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||||||||| || ||  ||||| || ||||||||||||||||| ||||||||| ||||| ||| | ||||||| ||||    
T  21423930 aaacacgggtatgagacgggtaacgggtatataggtacccaccccaaacccatacacaaacccgtcccaaatgtaaaaaa 21423851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 31918584 - 31918663
Alignment:
Q  231 aaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||||||||| |  || |||||  || |||||| |||||||||||||||||||||||||| ||| | ||||||| ||||    
T  31918584 aaacacgggtatgggacgagtaatgggtatatagttacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 31918663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 45065325 - 45065258
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| |||| |||||||||  || |||||| |||||||| ||||||| ||||||| |||||||||||    
T  45065325 gatttcaaaatacgggtacgggacgagtaacagggatatatgtacccatcccgaacgcatacccaaac 45065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 47239386 - 47239468
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||| ||| |||| || |||||||||||||||||| |  ||  ||||| || |||||||| ||||||| |||||||||||||    
T  47239386 tgggtatggattttttccgattttaaaacacgggtatgggacgggtaacgggtatataggttcccaccctgaacccataccca 47239468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 1866568 - 1866637
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 293  Q
    ||||| |||| |||||||||| ||  ||||   ||||||| ||| |||||||||||||||||||||||||    
T  1866568 gatttcaaaatacgggtacgagacgggtaatgcggatatatgtatccaccccgaacccatacccaaactc 1866637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 26564984 - 26564927
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 216  Q
    ||||| ||| ||||||  |||||||||||||||| ||||| ||| |||||||||||||    
T  26564984 tacccacccgaaccaaatccaatttgacggattttcttcgttttgactgggtttgggt 26564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 39047046 - 39046941
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| |  ||||  ||||||||||| |  ||| ||||| || |||||||||||||| || |||||||||||| || ||| | |||||||    
T  39047046 tgggtatgggttttccccaatttccaaacacgggtatgggacatgtaacgggtatataggtacccactccaaacccatacccatacccgtcccaaatgta 39046947  T
Q  306 gaaaat 311  Q
     |||||    
T  39046946 aaaaat 39046941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 54270640 - 54270584
Alignment:
Q  276 gaacccatacccaaactcgttcta-aatgtagaaaatcaatttattaccccttttata 332  Q
    |||||||||  ||||||| ||||| |||||||||||||||||||||||| ||||||||    
T  54270640 gaacccatattcaaactc-ttctagaatgtagaaaatcaatttattacctcttttata 54270584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 4237346 - 4237410
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 321  Q
    |||||||||||||||| |  ||| ||||| ||||||| ||  ||||||||||||| |||||||||    
T  4237346 ggatataggtacccacgcgaaacacatactcaaactcatttcaaatgtagaaaattaatttatta 4237410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 28695196 - 28695232
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgt 295  Q
    |||||||||| |||||||||| |||||||||||||||    
T  28695196 atataggtactcaccccgaactcatacccaaactcgt 28695232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 155 - 429
Target Start/End: Complemental strand, 9402727 - 9402454
Alignment:
Q  155 cgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaac 254  Q
    ||||||||||||| |||||| |||||||||| |||||| |  |||||| ||||| ||||||||||| | ||||| |||||| ||||||   ||  |||||    
T  9402727 cgggtacccgcccgaaccaaacccaatttgatggattttccccgctttgactggatttgggttttccccgatttcaaaacatgggtacaggacgggtaac 9402628  T
Q  255 tgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaa 354  Q
      ||||||||||  |||||| |||||||||| |||||  ||    ||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||    
T  9402627 atggatataggtgtccaccc-gaacccatactcaaacctgtctcgaatgtagaaaatcaatttagtaccccatttatataaatagaaacccaaaccctaa 9402529  T
Q  355 accatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
    | |||||| |||||||||||| | |||   | |||||||| ||||||||||||||||||| |||| |||||||||    
T  9402528 atcatttcactcacacagtcagagtctaggtctttcatatcacactcacttatcatagttctctcttttctcctt 9402454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 165 - 418
Target Start/End: Original strand, 8320754 - 8321007
Alignment:
Q  165 cccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatatag 264  Q
    ||||||||||||  |||||||||||||| |  |||||| ||| ||||||||||||| |  |||| |||||||||||||| |||| ||||| |||||||||    
T  8320754 cccaaaccaatcttaatttgacggattttccccgctttgactaggtttgggttttccccaatttcaaaacacgggtacggaacaggtaacagggatatag 8320853  T
Q  265 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgc 364  Q
     || | |||||||||||||||||| || |||||| |||| | |||||||| ||||||| || ||||   ||||||||||| |||||||||| |||||| |    
T  8320854 atatcgaccccgaacccatacccagacccgttctgaatgcaaaaaatcaacttattactccatttacgtaaatagaaacttaaaccctaaatcatttcac 8320953  T
Q  365 tcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatct 418  Q
    | ||||||||| | |||   | ||||| | |||| |||||||||||||||||||    
T  8320954 ttacacagtcagagtctcggtctttcagacgacattcacttatcatagttatct 8321007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 152 - 355
Target Start/End: Complemental strand, 32960002 - 32959800
Alignment:
Q  152 atgcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagt 251  Q
    |||||||||||| ||| || ||| || |||||||||||||| | ||| ||| | ||||||||||||||| || |||| |||||||||||||| |||  ||    
T  32960002 atgcgggtacccacccgaatcaaacctaatttgacggattttcctcgttttgattgggtttgggttttccctaatttcaaaacacgggtacggaacgggt 32959903  T
Q  252 aactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccc 351  Q
    ||| |||||||||||| |||||||||||||||| |||||  |||  ||||||||||||||||||||||||||||| ||||| ||  || ||| |||||||    
T  32959902 aacggggatataggtatccaccccgaacccata-ccaaatccgtcataaatgtagaaaatcaatttattacccctattatataagcagtaacccaaaccc 32959804  T
Q  352 taaa 355  Q
    ||||    
T  32959803 taaa 32959800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 259 - 419
Target Start/End: Complemental strand, 13769107 - 13768947
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacca 358  Q
    |||||||||||||||| ||||||||| |||||| ||| || ||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||  |    
T  13769107 atataggtacccacccagaacccatatccaaacccgtcctgaatgtagaaaatcaatttattactccttttatataaattgaaactcaaaccataaatta 13769008  T
Q  359 tttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctc 419  Q
    ||||  | ||||||||| | |||  || | ||||||||||||||||| ||| |||| ||||    
T  13769007 tttcagtaacacagtcagattctccatctctcatatgacactcacttctcagagttctctc 13768947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 209 - 429
Target Start/End: Complemental strand, 20349149 - 20348930
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||| ||||| | ||||| |||||||||||| |  || |||||| |||||||||||||||||||||||| ||||||||||  ||||  ||||||| ||    
T  20349149 gtttggattttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaatccgttgcaaatgtaaaa 20349050  T
Q  309 aatcaatttattaccccttttata-gaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttat 407  Q
    ||| |||||||||| | |||||||  ||||| |||||||||||||||| || ||| |||||||  ||| | |||     ||||| |||||||| ||||||    
T  20349049 aattaatttattacactttttatataaaatataaactcaaaccctaaatcacttcactcacac--tcagagtcttggactttcagatgacacttacttat 20348952  T
Q  408 catagttatctcatttctcctt 429  Q
    ||||||| |||| |||||||||    
T  20348951 catagttctctcttttctcctt 20348930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 255 - 431
Target Start/End: Original strand, 1947840 - 1948016
Alignment:
Q  255 tgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaa 354  Q
    ||||||||| |||| || | | ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||    
T  1947840 tgggatatatgtactcatctcaaacccatactcaaactcgttccaaatgtagaaaatcaatttattaccccttttatataaataaaaatccaaaccctaa 1947939  T
Q  355 accatttcgctcacacagtcaca--atctgaatttttcatatgacactcacttatcatagttatctcatttctcctttc 431  Q
      ||||   |||||||||||| |  ||||||   ||||| ||||||||||||||||||||||  ||| ||||| |||||    
T  1947940 gtcattatactcacacagtcagagtatctga--ctttcagatgacactcacttatcatagttccctcttttctactttc 1948016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 355
Target Start/End: Original strand, 256495 - 256642
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    ||||| |||||| | ||||| |||||| |||||||| ||  ||||  || ||||||||||||||||| ||||||||||||||| | | ||||||||||||    
T  256495 gtttgagttttccccgatttcaaaacatgggtacgagacgggtaatgggcatataggtacccaccccaaacccatacccaaacccctcctaaatgtagaa 256594  T
Q  309 aatcaatttattacccctttta-tagaaatagaaactcaaaccctaaa 355  Q
    |||||||||| ||||||||||| |  |||||||||| ||||| |||||    
T  256595 aatcaatttactaccccttttatttaaaatagaaacacaaactctaaa 256642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 224 - 414
Target Start/End: Original strand, 34346023 - 34346222
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 323  Q
    |||||||||| |||||| || | | |||||| ||||||||||||||||||||||| | |||||||||  |||||  |||||||||||| ||||||||||     
T  34346023 gattttaaaatacgggttcggagcgagtaacggggatataggtacccaccccgaatctatacccaaatccgttccgaatgtagaaaattaatttattact 34346122  T
Q  324 cctt---------ttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 414  Q
    ||||         ||||| |||||||||| ||||||||||| |||||| |||||||||||| | ||| | | ||| | |||| | |||||||||||||||    
T  34346123 ccttttatataaattatataaatagaaacccaaaccctaaatcatttcactcacacagtcagagtctcagtcttttagatgagagtcacttatcatagtt 34346222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 293
Target Start/End: Original strand, 29199836 - 29199972
Alignment:
Q  157 ggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactg 256  Q
    |||||||||||||||||| ||| ||||||||||||| |  || ||| | ||||||||| ||||| | ||||| |||| |||||||||  ||  ||||| |    
T  29199836 ggtacccgcccaaaccaaccccgatttgacggattttccccgatttgattgggtttggattttccccgatttcaaaatacgggtacgggacgggtaacag 29199935  T
Q  257 ggatataggtacccaccccgaacccatacccaaactc 293  Q
    ||||||| ||| | |||||||||||||||||||||||    
T  29199936 ggatatatgtatctaccccgaacccatacccaaactc 29199972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 28079696 - 28079780
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    ||||||||||||||| | ||||| |||||| |||||||  ||  ||||| |||||||||||||||||||||||||||||||||||    
T  28079696 tgggtttgggttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 371
Target Start/End: Original strand, 10925495 - 10925608
Alignment:
Q  258 gatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacc 357  Q
    |||||| ||| |||||||||||||||||| |||||| |||  |||||| ||||  |||||||||  ||||||||| |||||||| || |||||||||| |    
T  10925495 gatataagtatccaccccgaacccatacctaaactcattccgaatgtaaaaaaataatttattattccttttatataaatagaatctgaaaccctaaatc 10925594  T
Q  358 atttcgctcacaca 371  Q
    ||||| || |||||    
T  10925595 atttcactaacaca 10925608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 414
Target Start/End: Complemental strand, 29341341 - 29341131
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||  | |||||| ||||| ||| | || ||  ||||| | |||||||||||||| ||| ||| ||||||||||| ||| |  |||||||||    
T  29341341 gtttgggtttttcccgattttcaaacatgggcatgagacgggtaacggagatataggtacccatcccaaactcatacccaaacccgtcccgaatgtagaa 29341242  T
Q  309 aatcaatttatt---acccctttt--atagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcac 403  Q
    ||||| ||| ||   ||||||| |  ||| |||||||||| ||||||||| | |||||| || | ||||||| | ||| ||| ||||| |||||| ||||    
T  29341241 aatcattttttttttaccccttatctatataaatagaaacccaaaccctatatcatttcacttatacagtcagattctcaatctttcagatgacaatcac 29341142  T
Q  404 ttatcatagtt 414  Q
    |||||||||||    
T  29341141 ttatcatagtt 29341131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 291
Target Start/End: Original strand, 14410809 - 14410940
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 258  Q
    |||||| |||||||||  | |||||||||||||| |  || ||| ||| |||||| |||||| | ||||| |||||||||||| |  ||  ||||| ||     
T  14410809 tacccgtccaaaccaaatctaatttgacggattttcc-cgttttgactaggtttgagttttcccagatttcaaaacacgggtatgggacgggtaacgggt 14410907  T
Q  259 atataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||||||||||||||||||||||    
T  14410908 atataggtacccaccccgaacccatacccaaac 14410940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 12309660 - 12309555
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||| ||| ||||||| |||||||||||| | |||  ||||| || ||||| |||||||||||||||| |||||||||| ||| | |||||||    
T  12309660 tgggtatgggtattccctgatttcaaaacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgatacccaaacccgtcccaaatgta 12309561  T
Q  306 gaaaat 311  Q
     |||||    
T  12309560 aaaaat 12309555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 32853932 - 32853827
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  32853932 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 32853833  T
Q  306 gaaaat 311  Q
     |||||    
T  32853832 aaaaat 32853827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 24602854 - 24602941
Alignment:
Q  204 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||||| | ||||| |||||| ||||| |  ||  ||||| || |||||| ||||||||||||||||||||||||||    
T  24602854 actgggtttgggttttcccagatttcaaaacatgggtatgtgacgggtaacaggtatatagatacccaccccgaacccatacccaaac 24602941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 34179102 - 34179164
Alignment:
Q  300 aatgtagaaaatcaatttattacccctttt-atagaaatagaaactcaaaccctaaaccattt 361  Q
    ||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||    
T  34179102 aatgttgaaaatcaatttattacctctttttatataaatagaaactcaaaccctaaatcattt 34179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 15498406 - 15498313
Alignment:
Q  212 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||||||| | ||||| |||||||||||| || ||| ||||  || ||||||||||||| |||||||||| |||||||| ||| | |||||||    
T  15498406 tgggttttccccgatttcaaaacacgggtatgagacaggtaatgggtatataggtacccatcccgaacccacacccaaacccgtcccaaatgta 15498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 27738860 - 27738755
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| |  ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  27738860 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacagatatatatgtacccaccccgaacccatacccaaacccgtcccaaatgta 27738761  T
Q  306 gaaaat 311  Q
     |||||    
T  27738760 aaaaat 27738755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 3483967 - 3484027
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  3483967 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 3484027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 5863383 - 5863487
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||| |||||||| ||||||||||||||||| ||| | |||||||    
T  5863383 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccatacccaaacccgtcccaaatgta 5863482  T
Q  306 gaaaa 310  Q
     ||||    
T  5863483 aaaaa 5863487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 12141420 - 12141368
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  12141420 atataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 12141368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 14321861 - 14321793
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcac 368  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||||||| | |||| |||||| |||||    
T  14321861 aatgtagaaaattaatttattacctattttatataaatagaaactcaaatcttaaatcatttcactcac 14321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 2367414 - 2367329
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| |||||||||||||||||||||||||||    
T  2367414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaac 2367329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 10142518 - 10142603
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| ||||||||| | ||| | |||| ||||||| |  ||| ||||| || ||||||||||||||||||||| |||||||||||    
T  10142518 tgggtatgggttttccccgatctcaaaaaacgggtatgggacaggtaacgggtatataggtacccaccccgaactcatacccaaac 10142603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 24225742 - 24225681
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||||||||||||||||||||||||| ||||||| ||| | ||||||| |||||    
T  24225742 gtaacgggtatataggtacccaccccgaacccatgcccaaacccgtcccaaatgtaaaaaat 24225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 34178329 - 34178398
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccacccc 275  Q
    ||||| ||||||| | ||||||| ||||||||||||||| ||  |||||  |||||||||||||||||||    
T  34178329 tgggtatgggtttcccctgatttcaaaacacgggtacgagacgggtaacaaggatataggtacccacccc 34178398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 10188126 - 10188158
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||||||||||||||||||||||    
T  10188126 atataggtacccaccccgaacccatacccaaac 10188158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 27534728 - 27534668
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||| | ||||||| ||||    
T  27534728 gtaacgggtatataggtacccaccccgaatccatacccaaacccgtcccaaatgtaaaaaa 27534668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 32532622 - 32532523
Alignment:
Q  212 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||| | ||||| |||||||||||| |  ||  ||||  || ||||||||||||||||||||||||||| || || ||| | ||||||| |||||    
T  32532622 tgggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatactcatacccgtcccaaatgtaaaaaat 32532523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 14255045 - 14254957
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 295  Q
    |||||||| |||||||||||||| ||| |||||||| |  ||  ||||| |  |||||||||||||||  ||||||||||||||| ||||    
T  14255045 tgggtttgagttttctctgatttcaaa-cacgggtatgggacgtgtaacggaaatataggtacccaccatgaacccatacccaaattcgt 14254957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 7393858 - 7393974
Alignment:
Q  177 ccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccg 276  Q
    |||||||||||||||| |  |  ||| | ||||||||| ||||| | ||||| |||||||| ||| || ||   |||  || ||||||||| ||||||||    
T  7393858 ccaatttgacggattttccccattttgattgggtttggattttccccgatttcaaaacacgagtaagagacggataatgggtatataggtatccaccccg 7393957  T
Q  277 aacccatacccaaactc 293  Q
    ||||||||| |||||||    
T  7393958 aacccatactcaaactc 7393974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 12678147 - 12678179
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||||| ||||||||||||||||    
T  12678147 atataggtacccaccctgaacccatacccaaac 12678179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 32053132 - 32053072
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||| ||||||||||| ||||||||||||||| ||| | ||||||| ||||    
T  32053132 gtaacgggtatatatgtacccaccccaaacccatacccaaacccgtccaaaatgtaaaaaa 32053072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 4e-45; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 209 - 429
Target Start/End: Original strand, 8545352 - 8545572
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||||| ||||| |||||||||||| | ||| |||||| ||||||||| |||||||||||||||||||| ||||||||| | ||||||||||    
T  8545352 gtttgggttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaactcgtcccaaatgtagaa 8545451  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 408  Q
    ||||||||||  || ||||||||| ||| |||||  ||||||||||| |||||| |||| | || || | |||   | ||||| ||||||||||||||||    
T  8545452 aatcaatttacaactccttttatataaacagaaatccaaaccctaaatcatttcactcaaatagccagagtctcggtctttcaaatgacactcacttatc 8545551  T
Q  409 atagttatctcatttctcctt 429  Q
    ||| || |||| |||||||||    
T  8545552 ataattctctcttttctcctt 8545572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 257 - 429
Target Start/End: Complemental strand, 28345528 - 28345356
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||||| |||||||||||||||||||||||||| || || |||||||||||| ||| |||||||||||||||| ||||||||||  |||  |||||     
T  28345528 ggatataggcacccaccccgaacccatacccaaacttgtcctgaatgtagaaaataaatatattaccccttttatataaatagaaaccgaaattctaaat 28345429  T
Q  357 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
    |||||| |||||||||||| | ||| | | ||||| |||||||||||||||||||||| |||| | |||||||    
T  28345428 catttcactcacacagtcatagtctcagtatttcagatgacactcacttatcatagttctctcttatctcctt 28345356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 258 - 414
Target Start/End: Complemental strand, 29918643 - 29918487
Alignment:
Q  258 gatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacc 357  Q
    |||||| |||||||||||||| |||||| ||||| ||| | ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  29918643 gatatatgtacccaccccgaaaccatacacaaacccgtcccaaatgtaaaaaatcaatttattacctcttttatataaatagaaactcaaaccctaaatc 29918544  T
Q  358 atttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 414  Q
    ||||| |||||||||| | | ||| ||| ||||| |||||||| | |||||||||||    
T  29918543 atttcactcacacagttagagtctcaatctttcagatgacacttagttatcatagtt 29918487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 210 - 429
Target Start/End: Original strand, 17084111 - 17084332
Alignment:
Q  210 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt--aga 307  Q
    ||||||||||||| ||||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||| |||| |||||| | |    |||||  | |    
T  17084111 tttgggttttctccgattttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatccaaacccatcacgaatgtaaaaa 17084210  T
Q  308 aaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttat 407  Q
    |||||||||||||  || ||||||| ||||| |||| ||| |||||||  ||| | |||||||| ||| | | | | | |||||||||||| ||||||||    
T  17084211 aaatcaatttattgtcctttttatataaatataaacccaagccctaaattattcccctcacacaatcagagtttcagtctttcatatgacaatcacttat 17084310  T
Q  408 catagttatctcatttctcctt 429  Q
    |||||||||||| |||||||||    
T  17084311 catagttatctcttttctcctt 17084332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 209 - 427
Target Start/End: Complemental strand, 30904130 - 30903911
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||| ||| ||||| ||||||||||||||| ||  ||||  | |||||| |||||||||||  |||||||||||||   || |  |||||||||    
T  30904130 gtttgggtttcctc-gatttcaaaacacgggtacgagacgggtaatggagatataagtacccaccccatacccatacccaaatcagtcccgaatgtagaa 30904032  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaa-tctgaa-tttttcatatgacactcactta 406  Q
    |||||||||||||| | ||||||| ||||||||||  ||||| |||| |||||| |||||||||||| || ||| || ||||||| |||||| ||| |||    
T  30904031 aatcaatttattacacattttatataaatagaaaccaaaaccttaaatcatttcactcacacagtcaaaagtctcaattttttcaaatgacattcattta 30903932  T
Q  407 tcatagttatctcatttctcc 427  Q
    |||||||| |||| |||||||    
T  30903931 tcatagttttctcttttctcc 30903911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 429
Target Start/End: Original strand, 27777216 - 27777422
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 323  Q
    ||||| ||||||| ||||||  ||| ||||| | |||| |||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||    
T  27777216 gatttcaaaacacaggtacgggacaggtaacagagatacaggtacccaccccgaacccatacccaaactcgctctacatatataaaatcaatttattacc 27777315  T
Q  324 cc-ttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatt 422  Q
    || |||| || |||||||||   |||| ||||| |||||  || | ||||||  | | | | | ||||| ||||||||||||||||||||||  ||| ||    
T  27777316 cctttttgtataaatagaaatctaaactctaaatcattttacttaaacagtctgagtttcagtatttcagatgacactcacttatcatagttcactcctt 27777415  T
Q  423 tctcctt 429  Q
    |||||||    
T  27777416 tctcctt 27777422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 413
Target Start/End: Complemental strand, 36275080 - 36274924
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||| |||| ||||||||||||||||| ||||  || |  |||||| |||||||||||| || |||||||||| |||||||||| | |||||||||    
T  36275080 gggatataagtactcaccccgaacccatacctaaacatgtcccgaatgtaaaaaatcaatttactatcccttttatataaatagaaac-ccaaccctaaa 36274982  T
Q  356 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagt 413  Q
     |||||| |||||||||||| | |||   | ||||| |||||||||||||||||||||    
T  36274981 tcatttcactcacacagtcaaagtctcggtctttcagatgacactcacttatcatagt 36274924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 210 - 355
Target Start/End: Original strand, 12468223 - 12468367
Alignment:
Q  210 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 309  Q
    |||||||||||   |||||  |||||||||||||| ||| |||| |||||| |||||||| ||||||||| ||||| |||| ||||||  ||||||||||    
T  12468223 tttgggttttcctcgatttcgaaacacgggtacgagacatgtaa-tgggatgtaggtaccaaccccgaactcatactcaaattcgttccgaatgtagaaa 12468321  T
Q  310 atcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    ||||| ||||||||| ||||||| ||| |||||| |||| ||||||    
T  12468322 atcaacttattaccctttttatataaagagaaacgcaaatcctaaa 12468367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 291
Target Start/End: Complemental strand, 17469390 - 17469258
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 258  Q
    ||||| ||| |||||| ||||||||||||||||| |  || ||| ||||||||||||||||| | ||||| |||||||||||| |  ||  ||||| ||     
T  17469390 tacccacccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggt 17469291  T
Q  259 atataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||||| |||||||||||||||    
T  17469290 atataggtacccaccccaaacccatacccaaac 17469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 375
Target Start/End: Original strand, 9476031 - 9476182
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 323  Q
    ||||| |||| |||| ||||  ||||||||| ||||||||  |||||||| ||||||||||||||||| | | |  |||||||||||| || ||||||||    
T  9476031 gatttcaaaaaacggatacgggacaagtaacggggatataaatacccacctcgaacccatacccaaacccatcccgaatgtagaaaattaaattattacc 9476130  T
Q  324 ccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtca 375  Q
    |||| |||| ||||||||| | |||| |||||  ||||| ||||||||||||    
T  9476131 ccttatatataaatagaaattgaaactctaaattatttcactcacacagtca 9476182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 300 - 429
Target Start/End: Original strand, 6388599 - 6388728
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 399  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||| ||||||||||| |||||| |||||||| | | | ||| |   ||| | |||||||    
T  6388599 aatgtagaaaatcaatttattacccattttatataaacagaaacccaaaccctaaatcatttcactcacacaattagagtctcagactttaaaatgacac 6388698  T
Q  400 tcacttatcatagttatctcatttctcctt 429  Q
    ||||||||||||||| |||  |||||||||    
T  6388699 tcacttatcatagttctcttctttctcctt 6388728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 431
Target Start/End: Complemental strand, 5700426 - 5700219
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 323  Q
    ||||| ||||||| |||| || ||  ||||| ||||||||| |||||||| ||||||||||||||||  | | |  |||||| ||||| ||||| |||||    
T  5700426 gatttcaaaacacaggtatgagactggtaacggggatatagatacccacctcgaacccatacccaaatccatcccgaatgtataaaattaattttttacc 5700327  T
Q  324 ccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcattt 423  Q
    ||||||||| |||| |||||  |||| ||||| |||||| ||| || ||||| | ||| | | ||| | |||||| |||||||||||| || |||| | |    
T  5700326 ccttttatataaattgaaaccgaaactctaaatcatttcactcccatagtcagagtcttagtcttttagatgacagtcacttatcataattctctcttat 5700227  T
Q  424 ctcctttc 431  Q
    ||||||||    
T  5700226 ctcctttc 5700219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 281 - 371
Target Start/End: Complemental strand, 5793598 - 5793508
Alignment:
Q  281 catacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacaca 371  Q
    ||||| ||||||||| ||||||||| |||||||||| |||| |  ||||||| |||||||||||||||||||||| |||||| ||||||||    
T  5793598 catactcaaactcgtcctaaatgtaaaaaatcaattaattatcatttttatataaatagaaactcaaaccctaaatcatttcactcacaca 5793508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 14687483 - 14687378
Alignment:
Q  210 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 309  Q
    ||||||||||| | ||||| ||||||| |||| |  || || ||| |||||||| ||| ||||||||||||||||||||||||||| || ||||| ||||    
T  14687483 tttgggttttccccgatttcaaaacacaggtatgggacgagaaacagggatatatgtatccaccccgaacccatacccaaactcgtcctgaatgtggaaa 14687384  T
Q  310 atcaat 315  Q
    ||||||    
T  14687383 atcaat 14687378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 30481424 - 30481533
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||  ||||||| |||| ||| ||| || || |||||   ||||||||||||||||||||||||||||||||||||||| |  |||||| ||    
T  30481424 gtttgggtttttcctgatttcaaaatacgagtatgagacgagtaatgaggatataggtacccaccccgaacccatacccaaactcgtcccgaatgtaaaa 30481523  T
Q  309 aatcaattta 318  Q
    ||| ||||||    
T  30481524 aattaattta 30481533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 343
Target Start/End: Original strand, 9642301 - 9642489
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 255  Q
    ||||||||| ||| ||| |||||  |||||||| ||| |  |||||| ||||||||||||||||| | ||||| |||||||||||| |  ||  |||||     
T  9642301 gggtacccgtccagacccatcccggtttgacgggttttccccgctttgactgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacg 9642400  T
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacccc-ttttatagaaatagaaac 343  Q
    ||| ||||  || ||| ||||||||||||| || || ||| | ||||||| ||||| | ||| ||||||| ||||||| ||||||||||    
T  9642401 gggttatatatatccatcccgaacccatactcatacccgtcccaaatgtaaaaaattatttttttacccctttttatataaatagaaac 9642489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 24928037 - 24927933
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| ||||| |  ||||||||||| || ||  ||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  24928037 tgggtatgggttttccctgatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 24927938  T
Q  306 gaaaa 310  Q
     ||||    
T  24927937 aaaaa 24927933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 17108414 - 17108299
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||| |||| |||| |||||  |||||||||||| | |  | |||| ||||||||||||||| || ||||||| ||||||||||| ||||||||||    
T  17108414 gggatataagtacacacctcgaacttatacccaaactcatcccgattgtaaaaaatcaatttattatccattttatataaatagaaacttaaaccctaaa 17108315  T
Q  356 ccatttcgctcacaca 371  Q
      ||||| ||||||||    
T  17108314 taatttcactcacaca 17108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 20399680 - 20399595
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||||| ||||| |||||||||||| |  ||  ||||| || |||||| |||||||||||||||||| |||||||    
T  20399680 tgggtttgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccaccccgaacccattcccaaac 20399595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 14155545 - 14155494
Alignment:
Q  281 catacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata 332  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  14155545 catacccaaacccatcctaaatgtagaaaatcaatttattaccccttttata 14155494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 27932501 - 27932422
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 285  Q
    ||||| ||||||||| | ||||| |||||||||||| |  || |||||| || |||||||||||||||||||||||||||    
T  27932501 tgggtatgggttttccccgatttcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatac 27932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 37960965 - 37961060
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 304  Q
    |||||||||||| | ||||| |||||||||||| |  ||| ||||| || |||||||||| |||||||||| ||||||||||| ||| | ||||||    
T  37960965 gtttgggttttccccgatttaaaaacacgggtatgggacaggtaacaggtatataggtacacaccccgaactcatacccaaacccgtcccaaatgt 37961060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 45236153 - 45236040
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| || |||||| ||||||| |||||||||||| |  ||  ||||  || |||||||||||||||||||||||||| ||| || ||| | |||||||    
T  45236153 tgggtatgagttttccctgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatatccatacccgtcccaaatgta 45236054  T
Q  306 gaaaatcaatttat 319  Q
     ||||| |||||||    
T  45236053 aaaaattaatttat 45236040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 1012654 - 1012618
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgt 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  1012654 atataggtacccaccccgaacccatacccaaactcgt 1012618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 14186355 - 14186295
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 319  Q
    |||||||||| ||||| |||||||||||||||| ||| || |||||||||||| |||||||    
T  14186355 atataggtactcaccctgaacccatacccaaacccgtcctgaatgtagaaaattaatttat 14186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 24870033 - 24870129
Alignment:
Q  215 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    |||||| | |||||||||||||||||| |  ||  ||||| || ||||||||||||||||||| |||||||| |||| ||| | ||||||| |||||    
T  24870033 gttttccccgattttaaaacacgggtatgtgacgggtaacgggtatataggtacccaccccgagcccatacctaaacccgtcccaaatgtaaaaaat 24870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 32303105 - 32303045
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  32303105 gtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 32303045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 34777130 - 34777070
Alignment:
Q  230 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    |||||||||||| | ||| |||||| || || |||||||||||||||||||||||||||||    
T  34777130 aaaacacgggtatggaacgagtaacaggtatttaggtacccaccccgaacccatacccaaa 34777070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 343
Target Start/End: Original strand, 27056615 - 27056693
Alignment:
Q  266 tacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta-ccccttttatagaaatagaaac 343  Q
    |||||||||||||||||||| || |||||| | ||||||| ||||| | ||| ||| ||||||||||| ||||||||||    
T  27056615 tacccaccccgaacccatacacatactcgtcccaaatgtaaaaaattacttttttacccccttttatataaatagaaac 27056693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 6388516 - 6388581
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtaccca 271  Q
    ||||||||||| ||| | ||||||||||||||||||| | ||  ||||| ||||||||||||||||    
T  6388516 tgggtttgggtcttccccgattttaaaacacgggtacaagacgggtaacggggatataggtaccca 6388581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 15068588 - 15068668
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 287  Q
    |||||| |||||||| | ||||| |||| |||||||||  ||| ||||| |||||||| ||| |||||||||||||||||||    
T  15068588 tgggttcgggttttccccgatttcaaaatacgggtacgggacaggtaac-gggatatatgtatccaccccgaacccataccc 15068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 29108822 - 29108927
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||  | |||||||||||| ||||| |  ||  ||||| || ||||| |||||||||||||||||||||||| || ||| | |||||||    
T  29108822 tgggtatgggtttttcccgattttaaaacatgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccatacccgtcccaaatgta 29108921  T
Q  306 gaaaat 311  Q
     |||||    
T  29108922 aaaaat 29108927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 39445576 - 39445681
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||  | ||||| |||||||||||| |  ||| ||||| ||  |||||||||||||||||||| |||||||| || ||| | |||||||    
T  39445576 tgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtttataggtacccaccccgaactcatacccatacccgtcccaaatgta 39445675  T
Q  306 gaaaat 311  Q
     |||||    
T  39445676 aaaaat 39445681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 11880867 - 11880907
Alignment:
Q  315 tttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  11880867 tttattacccctcttatataaatagaaactcaaaccctaaa 11880907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 11898283 - 11898323
Alignment:
Q  315 tttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  11898283 tttattacccctcttatataaatagaaactcaaaccctaaa 11898323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 29416359 - 29416403
Alignment:
Q  387 tttcatatgacactcacttatcatagttatctcatttctcctttc 431  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||    
T  29416359 tttcagatgacactcacttatcatagttttctcttttctcctttc 29416403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 40789633 - 40789590
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactc 293  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  40789633 gtaacagggatatatgtacccaccccgaacctatacccaaactc 40789590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 2075902 - 2075864
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  2075902 gtaacgggtatataggtacccaccccgaacccataccca 2075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 2183609 - 2183691
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||| ||||||| ||||| |||| |||||||||| | | ||||  | |||||| ||||||||||||||| ||||| |||||    
T  2183609 gtttggattttctccgatttcaaaatacgggtacgagagaggtaatggagatatatgtacccaccccgaactcatactcaaac 2183691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 350
Target Start/End: Original strand, 35747283 - 35747332
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaacc 350  Q
    ||||| |||||||||| ||||||||| |||||| |||||||||||||||||    
T  35747283 aatgttgaaaatcaatctattacccc-tttatataaatagaaactcaaacc 35747332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 2075775 - 2075832
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 216  Q
    ||||||||  |||||| ||||||||||||||||| || || ||| |||||||||||||    
T  2075775 tacccgcctgaaccaaacccaatttgacggattttctccgttttgactgggtttgggt 2075832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 10297542 - 10297461
Alignment:
Q  210 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||| | ||||| |||| ||||| |||  ||| ||||| |||||||| ||||| |||| ||||||||||| ||||    
T  10297542 tttgggttttccccgatttcaaaatacggggacgggacaggtaacggggatatatgtacctaccctgaacccataccaaaac 10297461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 290
Target Start/End: Complemental strand, 36897093 - 36897060
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaa 290  Q
    ||||||||||| ||||||||||||||||||||||    
T  36897093 ggatataggtaaccaccccgaacccatacccaaa 36897060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 40248380 - 40248453
Alignment:
Q  215 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    |||||| | ||||| |||||||||||| || ||   |||| || ||||||||||||| ||||||||||||||||    
T  40248380 gttttccccgatttcaaaacacgggtatgagacggataacgggtatataggtacccatcccgaacccataccca 40248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 43113670 - 43113710
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    ||||| || ||||||||||||||||||||| ||||||||||    
T  43113670 gtaacaggtatataggtacccaccccgaactcatacccaaa 43113710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 9e-37; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 205 - 431
Target Start/End: Complemental strand, 25210467 - 25210241
Alignment:
Q  205 ctgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 304  Q
    |||||||| ||||||  | || ||||||||||||||| |  ||  |||||  ||||||| ||||||||||| |||||||||| |||| | | |  |||||    
T  25210467 ctgggtttaggtttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaacccctcccgaatgt 25210368  T
Q  305 agaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcact 404  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||| |||||| |||||||||||  | ||| |   ||| | ||| ||||||||    
T  25210367 agaaaatcaatttgttacccattttatataaatagaaactcaaaccctaaatcatttcactcacacagtcggagtctcagaattttagatggcactcact 25210268  T
Q  405 tatcatagttatctcatttctcctttc 431  Q
    ||||||||||||||| |||| ||||||    
T  25210267 tatcatagttatctcttttcacctttc 25210241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 428
Target Start/End: Complemental strand, 30697010 - 30696791
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||| |||||||  ||||||||||||| || ||||| ||  ||||| | |||||| ||||||||||||||| |||||||||||   | | ||||||| ||    
T  30697010 gtttaggttttcattgattttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaacctatcccaaatgtaaaa 30696911  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 408  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||||| ||| || |||||||||| | | |||   | |||||||||||| || |||| |    
T  30696910 aatcaatttattacccattttatataaatagaaattcaaaccctaaatcatgtcactcacacagttagagtctcggtctttcatatgacattctcttacc 30696811  T
Q  409 atagttatctcatttctcct 428  Q
    |||||| |||  ||||||||    
T  30696810 atagttctctattttctcct 30696791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 429
Target Start/End: Original strand, 35248386 - 35248604
Alignment:
Q  207 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 306  Q
    ||||||||||||||   ||||  |||||||||||| |  ||  ||||  |||||| ||||||||||||||||||||||||||||| ||| || |||||||    
T  35248386 gggtttgggttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccatacccaaacccgtcctgaatgtag 35248485  T
Q  307 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactta 406  Q
    ||||   || ||| |||||||||||| ||||||||| | |||||||||| |||||| ||||||||| || | ||| | | ||||| ||||||||| ||||    
T  35248486 aaaa---atatat-accccttttatataaatagaaaatgaaaccctaaatcatttcactcacacagacagagtctcagtctttcaaatgacactcgctta 35248581  T
Q  407 tcatagttatctcatttctcctt 429  Q
    | |||||| |||| | |||||||    
T  35248582 ttatagttctctcttatctcctt 35248604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 429
Target Start/End: Original strand, 34214676 - 34214879
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 324  Q
    |||| ||||||||||||||  ||| ||| | |  |||| || ||||||  ||||| ||||| ||||| ||| ||| ||||||||| |||||||||| |||    
T  34214676 atttcaaaacacgggtacgggacatgtatcggttatattggcacccacttcgaactcatactcaaacccgtcctagatgtagaaagtcaatttattgccc 34214775  T
Q  325 cttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttc 424  Q
      |||||| |||||||||||| ||| ||||| |||||| || ||||||||| | ||| | | ||||| ||||||||||||||||||||||  ||| ||||    
T  34214776 tgtttatataaatagaaactc-aactctaaatcatttcactaacacagtcagagtctcagtctttcacatgacactcacttatcatagttcgctcttttc 34214874  T
Q  425 tcctt 429  Q
    |||||    
T  34214875 tcctt 34214879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 13531987 - 13531873
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||| |||  ||||||||||||| || ||||| ||  | | ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||     
T  13531987 ggatatatgtattcaccccgaacccacactcaaacccgccccacatgtagaaaatcaatttattatccattttatataaatagaaactcaaaccctaaat 13531888  T
Q  357 catttcgctcacaca 371  Q
    |||||| ||||||||    
T  13531887 catttcactcacaca 13531873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 310
Target Start/End: Original strand, 6027845 - 6027993
Alignment:
Q  162 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggata 261  Q
    |||||| |||||| ||||||||||||| ||| |  || ||| | ||||||||||||||| | |||||||||||| ||||| || ||  ||||| || |||    
T  6027845 ccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggttttccccgattttaaaacatgggtatgagacgggtaacaggtata 6027944  T
Q  262 taggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    |||||||||||||||||||||||| || || ||| || |||| ||||||    
T  6027945 taggtacccaccccgaacccatactcatacccgtcctgaatgcagaaaa 6027993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 430
Target Start/End: Complemental strand, 13954737 - 13954610
Alignment:
Q  303 gtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactca 402  Q
    |||||||||||| |||||||| |||||||| |||||||||||| ||||||||| |||||| ||||| | || | | ||| |   ||||| ||||||||||    
T  13954737 gtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctcagactttcagatgacactca 13954638  T
Q  403 cttatcatagttatctcatttctccttt 430  Q
    ||||| |||||| |||| ||||||||||    
T  13954637 cttatgatagttctctcttttctccttt 13954610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 430
Target Start/End: Complemental strand, 14095944 - 14095817
Alignment:
Q  303 gtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactca 402  Q
    |||||||||||| |||||||| |||||||| |||||||||||| ||||||||| |||||| ||||| | || | | ||| |   ||||| ||||||||||    
T  14095944 gtagaaaatcaacttattaccacttttatataaatagaaactcgaaccctaaatcatttcactcactcggtgagagtctcagactttcagatgacactca 14095845  T
Q  403 cttatcatagttatctcatttctccttt 430  Q
    ||||| |||||| |||| ||||||||||    
T  14095844 cttatgatagttctctcttttctccttt 14095817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 419
Target Start/End: Original strand, 31600774 - 31600981
Alignment:
Q  212 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||| | || || |||||||| ||||  ||  |||||| | |||||| |||||||||   |||| ||||  |||| ||| |||| |||| ||  |    
T  31600774 tgggttttccccgaattgaaaacacgagtacataatgagtaacagagatatatgtacccacctgaaaccgatacttaaacgcgtcctaagtgtacaagtt 31600873  T
Q  312 caatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcata 411  Q
    ||||||| ||| ||||||||| |||||||||||||||| ||||| |||||| |||| ||||| | | ||| | | ||||||||||| |||||||||||||    
T  31600874 caatttaatacgccttttatataaatagaaactcaaactctaaatcatttcactcatacagttagagtcttagtctttcatatgacgctcacttatcata 31600973  T
Q  412 gttatctc 419  Q
    ||| ||||    
T  31600974 gttctctc 31600981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 414
Target Start/End: Complemental strand, 35965374 - 35965215
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata-gaaatagaaactcaaaccctaa 354  Q
    |||||| | |||||||| |||||||||||||||||| ||| |  ||||||||||||||||||||| |||||||||||  |||||| || | || || |||    
T  35965374 gggatacatgtacccactccgaacccatacccaaacccgtcccgaatgtagaaaatcaatttattgccccttttatactaaataggaattgaatccataa 35965275  T
Q  355 accatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 414  Q
    | |||||| |||| ||||| |  |||| | ||||||| || ||| |||||||||||||||    
T  35965274 atcatttcactcatacagtgaggatctcagtttttcagataacattcacttatcatagtt 35965215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 4961495 - 4961577
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata 332  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||| |  ||| |||||||| ||||||||||| ||||||||    
T  4961495 gtaacagggatataggtacacacctcgaacccatacccaaactcgtcccgaatatagaaaatgaatttattacctcttttata 4961577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 251 - 405
Target Start/End: Complemental strand, 40359388 - 40359234
Alignment:
Q  251 taactgggatataggtacccaccccgaacccatacccaaactcgttct-aaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaac 349  Q
    |||| |||||||||||||||| | |||||  |||| ||||| |  ||| ||||||| ||||||||||||||||  |||||||| |||||||||||||||     
T  40359388 taacagggatataggtacccatctcgaactaatactcaaac-ctctctcaaatgtaaaaaatcaatttattacatcttttatataaatagaaactcaaag 40359290  T
Q  350 cctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactt 405  Q
     ||||| ||||||  |||| |||| | | ||| ||| | |||||||||||||||||    
T  40359289 tctaaatcatttcagtcacgcagttagagtctcaatctctcatatgacactcactt 40359234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 13705361 - 13705459
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt 304  Q
    ||||| || |||||| | ||||| |||||||||||| || ||| ||||| || |||||||||||||||||||||||||||| |||| ||| | ||||||    
T  13705361 tgggtatgagttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccaccccgaacccatacctaaacccgtcccaaatgt 13705459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 370
Target Start/End: Original strand, 17845391 - 17845556
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt- 304  Q
    |||||||| |||||||  ||||| |||||||| ||| || ||  ||||  |  ||||| ||||||||||  ||||||||||||||| |||    |||||     
T  17845391 tgggtttgagttttcttcgatttcaaaacacgagtatgagaccggtaatggacatataagtacccacccttaacccatacccaaacccgtctcgaatgta 17845490  T
Q  305 agaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacac 370  Q
    | ||||||||||||||| || ||||||| |||||||||||| || |||||| |||||| |||||||    
T  17845491 aaaaaatcaatttattatcctttttatataaatagaaactccaaacctaaatcatttcactcacac 17845556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 38342519 - 38342604
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||| |||||| | |||||||||| |||| ||||  ||  ||||| |||||||| |||||||||||||||||||||||||||    
T  38342519 tgggtttgagttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccatacccaaac 38342604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 429
Target Start/End: Original strand, 29656828 - 29656959
Alignment:
Q  299 aaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgaca 398  Q
    ||||||| ||||||||||||||| |||||||||| ||||| ||||   ||||||||| |||||  |||||||||||| | ||| | | ||||| ||||||    
T  29656828 aaatgtataaaatcaatttattatcccttttatataaataaaaaccataaccctaaatcatttgactcacacagtcaaagtctcagtctttcagatgaca 29656927  T
Q  399 ctcac-ttatcatagttatctcatttctcctt 429  Q
    || || |||||||| || |||| | |||||||    
T  29656928 ctgactttatcataattctctcttatctcctt 29656959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 355
Target Start/End: Original strand, 34544405 - 34544460
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    ||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||    
T  34544405 aatgtagaaaatctatttattacccattttatataaataaaaactcaaaccctaaa 34544460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 414
Target Start/End: Original strand, 35409248 - 35409360
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 399  Q
    |||||| ||||||||||| |||||| || ||||  |||| |||| ||||| |||||| ||||| || ||||||||| | ||| | | || ||||||||||    
T  35409248 aatgtataaaatcaattttttacccgttatata--aataaaaacccaaactctaaactatttcacttacacagtcagagtctcagtcttacatatgacac 35409345  T
Q  400 tcacttatcatagtt 414  Q
    |||||||||||||||    
T  35409346 tcacttatcatagtt 35409360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 8915938 - 8916042
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||||| ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  8915938 tgggtatgggttttctc-gatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgta 8916036  T
Q  306 gaaaat 311  Q
     |||||    
T  8916037 aaaaat 8916042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 353
Target Start/End: Complemental strand, 11959038 - 11958957
Alignment:
Q  272 ccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaacccta 353  Q
    |||||||| ||||||||||||| |  | |||||| ||||||||||||||||| |||||||| ||  ||||||||||| ||||    
T  11959038 ccccgaactcatacccaaactcatcatgaatgtataaaatcaatttattacctcttttatataagcagaaactcaaaaccta 11958957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 37999572 - 37999467
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| || ||  ||||| || ||||| ||||||||||||||| ||||||||||| ||| | |||||||    
T  37999572 tgggtatgggttttccccgatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcatacccaaacccgtcccaaatgta 37999473  T
Q  306 gaaaat 311  Q
     |||||    
T  37999472 aaaaat 37999467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 24414176 - 24414236
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  24414176 gtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 24414236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 34458833 - 34458956
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    |||||||||||||||||  |||| |||||||||||||| ||| |||||    |||||| ||| ||  ||||||| | || ||||||||||||  ||||||    
T  34458833 tgggtttgggttttctccaatttcaaaacacgggtacggaacgagtaatgaagatatatgtatccgtcccgaactcctatccaaactcgttc-gaatgta 34458931  T
Q  306 gaaaatcaatttattacccctttta 330  Q
     ||||| ||||||||| ||||||||    
T  34458932 aaaaataaatttattatccctttta 34458956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 18485739 - 18485652
Alignment:
Q  204 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||| ||   |||||||||| ||||||||   ||  ||||| |||||||| |||||||||| ||||||||||||||||    
T  18485739 actgggtttgggttatcctcgattttaaaatacgggtacagtacgggtaacggggatatatgtacccaccctgaacccatacccaaac 18485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 291
Target Start/End: Complemental strand, 43371640 - 43371557
Alignment:
Q  208 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||| |||||| | |||||||||| |||||||||  ||  ||||| |||||||| ||||||||||| ||| |||||||||||    
T  43371640 ggtttgagttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcatacccaaac 43371557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15886416 - 15886366
Alignment:
Q  1 actccatgaattaattttcttccatatcttatccttgataaagctaaaagt 51  Q
    |||||||||||||||||||||||| |||||||| |||||||| || |||||    
T  15886416 actccatgaattaattttcttccaaatcttatctttgataaaactgaaagt 15886366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 37309828 - 37309886
Alignment:
Q  303 gtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccattt 361  Q
    ||||||||||||||||| | |||||||| | ||||||||| |||||||||||| |||||    
T  37309828 gtagaaaatcaatttatcatcccttttacataaatagaaattcaaaccctaaagcattt 37309886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 7314648 - 7314753
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | |||||||||| ||| ||| |  ||  ||||| || |||||||| ||||||||||||||||||||| || ||| | |||||||    
T  7314648 tgggtatgggttttccccgattttaaaatacgagtatgggacgggtaacgggtatataggttcccaccccgaacccatacccacacccgtcccaaatgta 7314747  T
Q  306 gaaaat 311  Q
     |||||    
T  7314748 aaaaat 7314753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 287
Target Start/End: Original strand, 24051624 - 24051705
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 287  Q
    |||||||||| |||||| |||||||||| ||| ||| |  ||  ||||| |||||||| ||||| |||||||||||||||||    
T  24051624 tgggtttgggatttctccgattttaaaatacgagtatgggacgggtaacagggatatatgtacctaccccgaacccataccc 24051705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 30846991 - 30846950
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  30846991 gtaacgggtatataggtacccaccccgaacccatacccaaac 30846950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 287
Target Start/End: Complemental strand, 37106781 - 37106700
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccc 287  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||||||||| ||||||||||||||    
T  37106781 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccactccgaacccataccc 37106700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 36128150 - 36128210
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || |||||||||| |||||||||||||||||||||| ||| | ||||||| ||||    
T  36128150 gtaacgggtatataggtactcaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 36128210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 9632422 - 9632371
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||||||| ||||||||||||||||||||||| ||| | ||||||| ||||    
T  9632422 atataggtatccaccccgaacccatacccaaacccgtcccaaatgtaaaaaa 9632371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 22900883 - 22900801
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||||||||||||  | ||||| |||||||||||| |  || |||||| ||| ||||  |||||||||||||| ||||||||    
T  22900883 tgggtttgggtttttcccgatttcaaaacacgggtatgggacgagtaacggggttatatatacccaccccgaactcataccca 22900801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 33174365 - 33174307
Alignment:
Q  323 cccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatct 381  Q
    |||||||||| |||||||||| |||||||||||| | ||| |||||| ||||| |||||    
T  33174365 cccttttatataaatagaaacccaaaccctaaacaacttcactcacatagtcagaatct 33174307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 3547251 - 3547170
Alignment:
Q  210 tttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||  | ||||| |||| |||||||||  ||  ||||| | |||||| |||||||||||||||||||| ||||||    
T  3547251 tttgggtttttaccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccaccccgaacccatatccaaac 3547170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 14331572 - 14331531
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| |||||||| |||||||| ||||||||||||||||||    
T  14331572 gtaacggggatatatgtacccactccgaacccatacccaaac 14331531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 42798012 - 42798073
Alignment:
Q  230 aaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||| || ||  ||||| || ||||| ||||||||||||||||||||| |||||    
T  42798012 aaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaacccatacacaaac 42798073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 45256859 - 45256798
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatt 320  Q
    ||||| |||||||||||||||||||||| |||| ||| | ||||||| ||||| | ||||||    
T  45256859 atataagtacccaccccgaacccatacctaaacccgtcccaaatgtaaaaaattactttatt 45256798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 10920681 - 10920629
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||| ||||||||||||||||||||||  ||| | ||||||| |||||    
T  10920681 atataggtatccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 10920629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 39256398 - 39256430
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacgg 188  Q
    ||||||||||||||||||| |||||||||||||    
T  39256398 gggtacccgcccaaaccaaccccaatttgacgg 39256430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 45115629 - 45115569
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccata 284  Q
    ||||| |||||||||||| || ||  ||||| || ||||||||||||| ||||||||||||    
T  45115629 gatttcaaaacacgggtatgagacgggtaacaggtatataggtacccatcccgaacccata 45115569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 209 - 431
Target Start/End: Complemental strand, 38973007 - 38972785
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||  | ||||| |||||| ||||| |  | | ||||| || ||||||||||||||||||||||||||| ||||| | |   ||||| | ||    
T  38973007 gtttgggtttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtacccaccccgaacccatactcaaacccatctcaaatgcataa 38972908  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 408  Q
    ||||||||||||| |||||||||| |||| |||||| |||||||||| |||||   |||||| || | | ||| ||| ||||||||||||||||||||||    
T  38972907 aatcaatttattaacccttttatataaatcgaaactgaaaccctaaatcatttgattcacactgttagagtctaaatctttcatatgacactcacttatc 38972808  T
Q  409 atagttatctcatttctcctttc 431  Q
    |||||| |||| | |||||||||    
T  38972807 atagttctctcttatctcctttc 38972785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 159 - 371
Target Start/End: Complemental strand, 6810293 - 6810081
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 258  Q
    |||||| || |||||| | |||||||||||||||  | |||||| | || |||||||||||| | ||||||| |||||||||||| |||  |||||  ||    
T  6810293 tacccgtccgaaccaaactcaatttgacggattttttccgctttgaatgagtttgggttttccccgattttagaacacgggtacggaacgggtaacgagg 6810194  T
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacca 358  Q
    ||||| |||| |||||||||||||||||||||| | | |  ||||  ||||||||||||||| |||||||||||  ||||||||| |||||| ||||  |    
T  6810193 atataagtactcaccccgaacccatacccaaacccatcccgaatggtgaaaatcaatttattgccccttttatatcaatagaaacccaaaccttaaatga 6810094  T
Q  359 tttcgctcacaca 371  Q
    |||| ||||||||    
T  6810093 tttcactcacaca 6810081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 426
Target Start/End: Complemental strand, 29665015 - 29664839
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaac 349  Q
    ||||| |||||||||||||||||  ||||| ||||||||||| ||| |  |||||| |||||||||||| ||||||||||||  ||||||||||||||||    
T  29665015 gtaacggggatataggtacccacttcgaactcatacccaaacccgtcccgaatgtacaaaatcaatttactaccccttttatttaaatagaaactcaaac 29664916  T
Q  350 cctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctc 426  Q
     ||||| ||||||  | |||  |||| | ||| | | ||||| ||||||||||||||||||| || |||| ||||||    
T  29664915 tctaaatcatttcatttacattgtcagagtctcagtatttcagatgacactcacttatcataattctctcttttctc 29664839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 414
Target Start/End: Complemental strand, 17153306 - 17153049
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 255  Q
    |||||| ||||| |||||| |||| |||||||| ||||  | | ||| |||| ||||| ||||| || |||||||||||| |||||||  ||   |||||    
T  17153306 gggtactcgcccgaaccaaacccactttgacggttttctct-gttttaactgagtttgagttttttccgattttaaaacatgggtacgggacggataact 17153208  T
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
      |||||| |||| || ||| ||||||||||||||| ||| |  |||||||||||||||||||||||||||| || | |||||||||  |||| ||||||    
T  17153207 atgatatatgtactcatcccaaacccatacccaaacccgtcccgaatgtagaaaatcaatttattaccccttctagataaatagaaatccaaaacctaaa 17153108  T
Q  356 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagtt 414  Q
      ||||| |||||||||||| |  || | | ||||| |||| | |||||||||||||||    
T  17153107 taatttcactcacacagtcagatactcagtctttcaaatgagattcacttatcatagtt 17153049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 429
Target Start/End: Original strand, 27900453 - 27900623
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||||||||||| | ||||||||||||||||  ||  |  |||||| |||||||||||||| || |||||||| ||||||||||| ||||||||||     
T  27900453 ggatataggtacccatctcgaacccatacccaaatccgccccgaatgtataaaatcaatttatttcctcttttatataaatagaaactgaaaccctaaat 27900552  T
Q  357 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
    ||||||  ||||||| ||| ||||  | | ||||| ||||||||||||||  |||||| |||| | |||||||    
T  27900553 catttcagtcacacattcagaatc--agtctttcagatgacactcacttaatatagttctctcttatctcctt 27900623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 361
Target Start/End: Original strand, 16311297 - 16311448
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    ||||| ||||| || ||||| |||||||| |||||| ||   |||| |||||||||||||||||||||||||||||  |||||  ||    ||||| |||    
T  16311297 gtttgagttttttccgatttcaaaacacgagtacgagacggataacagggatataggtacccaccccgaacccatattcaaacctgtctcgaatgttgaa 16311396  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccattt 361  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||| |||||    
T  16311397 aatcaatttattatcccttttatataaatagaaac-caaaccctaaatcattt 16311448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 300 - 431
Target Start/End: Complemental strand, 35584110 - 35583980
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 399  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||| | ||| | | ||||| ||| |||    
T  35584110 aatgtacaaaatcaatttattaccc-ttttatataaatagaaactcaaaccctaaatcattttgctcacacagtcagagtctcagtctttcagatgtcac 35584012  T
Q  400 tcacttatcatagttatctcatttctcctttc 431  Q
    ||| ||||||  ||| |||  |||||||||||    
T  35584011 tcatttatcactgttctctgttttctcctttc 35583980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 419
Target Start/End: Original strand, 40187661 - 40187870
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||||||||| |  |||| ||||||||||| ||| ||  ||||| | ||||||||||  |||||  ||| ||||||||||||||| |  ||| |||||    
T  40187661 gtttgggttttccccaatttcaaaacacgggtgcgagacgggtaacggagatataggtattcaccca-aactcatacccaaactcgtcccgaatatagaa 40187759  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatc 408  Q
    ||| ||||||||||| |||||||| |||||| ||   ||| |||||| |||||  |||||| ||||| | | | ||| ||||| ||||||||||||||||    
T  40187760 aattaatttattacctcttttatataaatagtaatgaaaatcctaaatcattttactcacatagtcagagtttcaatctttcagatgacactcacttatc 40187859  T
Q  409 atagttatctc 419  Q
    |||||| ||||    
T  40187860 atagttctctc 40187870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 311
Target Start/End: Original strand, 35193943 - 35194095
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 258  Q
    |||||||||||| ||| |||||||||||||||||  | || |||  |||| ||||||| ||||||| |||||||||||||||| |  ||  ||||| ||     
T  35193943 tacccgcccaaatcaaacccaatttgacggattttttccgttttggctggatttgggtattctctgtttttaaaacacgggtatgggacgggtaacgggt 35194042  T
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||||||||||| ||| ||||| ||||| ||| |  ||||||||||||    
T  35194043 atataggtacccaccccaaactcatactcaaacccgtcccgaatgtagaaaat 35194095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 402
Target Start/End: Complemental strand, 8020694 - 8020507
Alignment:
Q  215 gttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaa 314  Q
    |||||| | ||||| |||||||||||||  ||   ||||| ||||||||||||| || | ||||| ||||| ||||| |||||| |||||||||||||||    
T  8020694 gttttccccgatttcaaaacacgggtactgaatgggtaacagggatataggtactcatctcgaactcatacgcaaacccgttctgaatgtagaaaatcaa 8020595  T
Q  315 tttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactca 402  Q
    |||| ||||||||||||| |||   ||||  ||||||||||  ||| | |||| ||||||| | ||| | | ||||| ||||||||||    
T  8020594 tttactaccccttttatataaaggaaaacctaaaccctaaattattccactcaaacagtcagagtctcagtctttcaaatgacactca 8020507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 310
Target Start/End: Complemental strand, 12447515 - 12447365
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 258  Q
    ||||| ||| |||||| |||||||||||||||||||  |  ||| |||||||||||||||||  ||||| |||||||| |||| |  ||| ||||  ||     
T  12447515 tacccacccgaaccaaacccaatttgacggatttccc-cattttgactgggtttgggttttccttgattgtaaaacacaggtatgggacaggtaatgggt 12447417  T
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    |||||||||||||||||||||| |||||||||| ||| | |||| |||||||    
T  12447416 atataggtacccaccccgaacctatacccaaacccgtcccaaatatagaaaa 12447365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 213 - 429
Target Start/End: Original strand, 18451893 - 18452109
Alignment:
Q  213 gggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatc 312  Q
    |||||||| | ||||| |||| || ||||||| ||| |||||   |||||| ||||||||||||||| ||||  ||||||||| |  | |||||||||||    
T  18451893 gggttttccccgatttgaaaatacaggtacgagacatgtaacacagatataagtacccaccccgaactcataatcaaactcgtcccgattgtagaaaatc 18451992  T
Q  313 aatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatag 412  Q
    ||||||||| ||||||||||  ||||||||  | || | || | |||||| |||||||||| | | |||   | ||||| |||| | ||||||||||| |    
T  18451993 aatttattatcccttttatattaatagaaatacgaatcttagatcatttcactcacacagttaaagtctcggtctttcagatgatagtcacttatcatgg 18452092  T
Q  413 ttatctcatttctcctt 429  Q
    || |||| |||||||||    
T  18452093 ttctctcttttctcctt 18452109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 274 - 371
Target Start/End: Complemental strand, 12457537 - 12457440
Alignment:
Q  274 ccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacaca 371  Q
    |||||| ||||||||||| ||| |  ||||||||||||||||||||||||||||| ||| ||||||||||  |||  ||||| |||||| ||||||||    
T  12457537 ccgaactcatacccaaacccgtcccgaatgtagaaaatcaatttattacccctttaatataaatagaaacctaaagtctaaatcatttcactcacaca 12457440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 160 - 291
Target Start/End: Original strand, 12712512 - 12712643
Alignment:
Q  160 acccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggga 259  Q
    ||||||||||||||| ||| ||||||| | ||| |  || ||| |||| |||||||||||||| ||||| |||| |||||||||  ||   |||| | ||    
T  12712512 acccgcccaaaccaaccccgatttgacaggttttccccgatttgactgagtttgggttttctccgatttcaaaatacgggtacgggacggataacggaga 12712611  T
Q  260 tataggtacccaccccgaacccatacccaaac 291  Q
    |||| ||||||||| |||||||||||||||||    
T  12712612 tatatgtacccacctcgaacccatacccaaac 12712643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 30996678 - 30996579
Alignment:
Q  212 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||||| |||||||||||||| ||| |  ||| ||||| || ||||||||||||||||||||| || |||||||| ||| | ||||||| |||||    
T  30996678 tgggttttctccgattttaaaacacgagtatgggacaggtaacgggtatataggtacccaccccgaacacacacccaaacccgtcccaaatgtaaaaaat 30996579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 338
Target Start/End: Original strand, 32574941 - 32575071
Alignment:
Q  208 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtaga 307  Q
    ||||||||||||| | ||||| ||||||| | ||||  |   |||||  ||||||| ||||||| |||||||||| |||||||| ||  |  ||||||||    
T  32574941 ggtttgggttttccccgatttcaaaacacagatacgggatgggtaacatggatatatgtacccatcccgaacccaaacccaaacccgccccgaatgtaga 32575040  T
Q  308 aaatcaatttattaccccttttatagaaata 338  Q
    | ||||||||||||||||||||||| |||||    
T  32575041 atatcaatttattaccccttttatataaata 32575071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 429
Target Start/End: Original strand, 7350458 - 7350631
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||||| | |||||||||||||||||  |||| |||   ||||||||||||| ||||||||| | |||||||| |||||| ||   ||||||||||    
T  7350458 gggatataggcatccaccccgaacccatacttaaacccgtctcaaatgtagaaaattaatttattatcgcttttatataaatagtaatcgaaaccctaaa 7350557  T
Q  356 ccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
     |||||  |||||| ||| | | ||  ||| ||| | | ||| |||||||||||||||| |||| | |||||||    
T  7350558 tcattttactcacatagttagagtcgcaatctttgagacgacgctcacttatcatagttctctcttatctcctt 7350631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 319
Target Start/End: Original strand, 38006423 - 38006583
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 258  Q
    ||||||||| ||||||  || ||||||||| ||| || |  ||| ||||||||||||||||| |  |||| |||| ||||||| |  ||  ||||| |      
T  38006423 tacccgccctaaccaaatccgatttgacgggttttctccattttgactgggtttgggttttccccaatttcaaaatacgggtatgggacgcgtaacagat 38006522  T
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 319  Q
    ||||||||||||||||||||||||||||||||  ||| |  ||||| |||||| |||||||    
T  38006523 atataggtacccaccccgaacccatacccaaatccgtcccgaatgttgaaaattaatttat 38006583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 287
Target Start/End: Original strand, 10822477 - 10822608
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaact 255  Q
    ||||||||||||||||| | | | ||||||||| ||| |  |  ||| ||||| ||||||||||||| ||||| ||||||||||||    ||  |||||     
T  10822477 gggtacccgcccaaacccacctcgatttgacgggttttccccattttgactggatttgggttttctccgatttcaaaacacgggtataggacgggtaacg 10822576  T
Q  256 gggatataggtacccaccccgaacccataccc 287  Q
    ||| |||| |||||||||||||||||||||||    
T  10822577 gggttatatgtacccaccccgaacccataccc 10822608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 4920914 - 4920809
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||| ||||||||||||||||||||||| ||| | |||||||    
T  4920914 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatgta 4920815  T
Q  306 gaaaat 311  Q
     |||||    
T  4920814 aaaaat 4920809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 419
Target Start/End: Original strand, 16366526 - 16366663
Alignment:
Q  284 acccaaactcgttctaaatgtagaaaatcaatttattac-cccttttatagaaatagaaactc-aaaccctaaaccatttcgctcacacagtcacaatct 381  Q
    |||||||||||| |  |||||||||||| | |||||||| |||||||||| ||| |||||||| ||||| |||| ||||||  ||||||| ||| |||||    
T  16366526 acccaaactcgtcccgaatgtagaaaattattttattactcccttttatataaaaagaaactcaaaaccataaatcatttccgtcacacaatcagaatct 16366625  T
Q  382 gaatttttcatatgacactcacttatcatagttatctc 419  Q
     |   | ||| ||||||||||||||||| |||| ||||    
T  16366626 cagcctatcagatgacactcacttatcagagttctctc 16366663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 28569025 - 28569106
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    |||||| ||||| | ||||| ||||  ||||||||  ||  ||||| |||||||||||||||||||||||||||||||||||    
T  28569025 gtttggattttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 10127116 - 10127064
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  10127116 atataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 10127064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 20973497 - 20973581
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    ||||| ||||||||| | |||||| ||||||||||| |  |   ||||| || ||||||||||||||||||||||||||||||||    
T  20973497 tgggtatgggttttccccgattttcaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccatacccaaa 20973581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 355
Target Start/End: Complemental strand, 24207772 - 24207626
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggta--cccaccccgaacccatacccaaactcgttctaaatg 303  Q
    |||||||| |||||| | ||||| ||||||| ||||   ||| | |||| |||||||| |||  ||||||| ||| |||||||||||| ||     ||||    
T  24207772 tgggtttgagttttccccgatttcaaaacacaggtatcgaacgaataacagggatataagtatacccaccctgaagccatacccaaacccg-----aatg 24207678  T
Q  304 tagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||| |||||||||  ||||||||| ||||| ||||| ||||||||||    
T  24207677 tagaaaattaatttattaatccttttatataaataaaaactaaaaccctaaa 24207626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 291
Target Start/End: Original strand, 12773776 - 12773907
Alignment:
Q  160 acccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggga 259  Q
    ||||||||||||||| ||| ||||||| | ||| |  || ||| | || |||||||||||||| ||||| |||| |||||||||  ||   |||| | ||    
T  12773776 acccgcccaaaccaaccccgatttgacaggttttccccgatttgattgagtttgggttttctccgatttcaaaatacgggtacgggacggataacggaga 12773875  T
Q  260 tataggtacccaccccgaacccatacccaaac 291  Q
    |||| ||||||||| ||||||||||| |||||    
T  12773876 tatatgtacccacctcgaacccatactcaaac 12773907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 15890288 - 15890190
Alignment:
Q  212 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||||| ||||| |||||||||||| |  ||  ||||| || ||||||||||||| |||||||||||||||| || ||| | ||||||| |||||    
T  15890288 tgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatataggtaccca-cccgaacccatacccatacccgtcccaaatgtaaaaaat 15890190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 457467 - 457529
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 362  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||  ||| |||||| ||||||    
T  457467 aatgtataaaatcaatttattacaccttttatataaatagaaaccaaaatcctaaatcatttc 457529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 4583207 - 4583102
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||| |||||||| |||||||||||| || ||| | |||||||    
T  4583207 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggttcccaccccaaacccatacccatacccgtcccaaatgta 4583108  T
Q  306 gaaaat 311  Q
     |||||    
T  4583107 aaaaat 4583102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 6092563 - 6092624
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||||||||||||||||||||||||||||||||  ||| | ||||||| |||||    
T  6092563 gtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 6092624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 319
Target Start/End: Original strand, 12834619 - 12834688
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttat 319  Q
    ||||| || ||||||||||| |||||||||||||||||| || ||| | ||||||| ||||| |||||||    
T  12834619 gtaacaggtatataggtacctaccccgaacccatacccatacccgtcccaaatgtaaaaaattaatttat 12834688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 12866552 - 12866657
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| || |||||||| ||||| |||||| ||||| |  ||  ||||| || ||||||||||||||| |||||||||||||| || ||| | |||||||    
T  12866552 tgggtatgagttttctccgatttcaaaacatgggtatgggacgggtaacaggtatataggtacccaccgcgaacccatacccatacccgtcccaaatgta 12866651  T
Q  306 gaaaat 311  Q
     |||||    
T  12866652 aaaaat 12866657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 39887173 - 39887258
Alignment:
Q  277 aacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 362  Q
    |||||| || ||||| ||| ||||| ||||||||||||||||||  | |||||||| |||||||||||| ||  ||||| ||||||    
T  39887173 aacccacactcaaacccgtcctaaacgtagaaaatcaatttattctctcttttatataaatagaaactcgaaatctaaatcatttc 39887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 22694959 - 22695007
Alignment:
Q  263 aggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  22694959 aggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 22695007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 42987533 - 42987585
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||||||| ||||||||||||||||||| ||| | ||||||| |||||    
T  42987533 atataggtacccatcccgaacccatacccaaacccgtcccaaatgtaaaaaat 42987585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 29245952 - 29246034
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||| || |||||||| ||||| |||||||||||| |  || | ||||  | ||||||||||||||||| ||||||||||||    
T  29245952 tgggtatgagttttctccgatttcaaaacacgggtatgggacgaataacatgtatataggtacccaccccaaacccataccca 29246034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 1218799 - 1218738
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || |||||||||||||| ||||||||||||||| || ||| | ||||||| |||||    
T  1218799 gtaacgggtatataggtacccactccgaacccatacccatacccgtcccaaatgtaaaaaat 1218738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 23044992 - 23045077
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||| ||||||| | ||||| |||| |||||||||  |   ||||| | |||||| |||||||||||||||||||||| ||||    
T  23044992 tgggtttaggttttccccgatttcaaaatacgggtacgggatgggtaacggagatatatgtacccaccccgaacccataccaaaac 23045077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 209 - 407
Target Start/End: Original strand, 30904819 - 30905016
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaa 308  Q
    |||||| |||| |||||||| ||||||||||||||  ||  ||| | |||||||||||||||||||||||||||||||||||  |||    ||||||| |    
T  30904819 gtttggcttttttctgatttcaaaacacgggtacgggacgggta-cggggatataggtacccaccccgaacccatacccaaatccgtctcgaatgtagga 30904917  T
Q  309 aatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttat 407  Q
    |||||||||| ||||||||||||| |||||||||| |||||||| || |||||| |||| | ||||| | |   | | |||||||||||||||||||||    
T  30904918 aatcaatttactaccccttttatataaatagaaacccaaacccttaatcatttcactcatatagtcagagttgtagtctttcatatgacactcacttat 30905016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 371
Target Start/End: Original strand, 772756 - 772958
Alignment:
Q  165 cccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatatag 264  Q
    |||||||||| |||||||||||| |||| | ||  ||| ||||||||| |||||||   |||| ||||||||   || |  ||| ||||| ||||||||     
T  772756 cccaaaccaaacccaatttgacgaattttcctcattttgactgggtttaggttttc---gattgtaaaacacaaatatgggacaggtaacagggatatat 772852  T
Q  265 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgc 364  Q
     |||||||||||||| ||| ||||||   || | |||| ||||||||||||||||||||| |||| || ||||||||||||||||| | || |||||| |    
T  772853 ctacccaccccgaactcatgcccaaatatgtcccaaatatagaaaatcaatttattaccc-ttttgtataaatagaaactcaaaccttgaatcatttcac 772951  T
Q  365 tcacaca 371  Q
    |||||||    
T  772952 tcacaca 772958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 429
Target Start/End: Complemental strand, 27252585 - 27252433
Alignment:
Q  276 gaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtca 375  Q
    ||||||||||||||||||   || |||||||||  |||||||||||||| ||||||| ||||||||||  ||| | |||| |||||| |||||||||| |    
T  27252585 gaacccatacccaaactcaccctgaatgtagaatttcaatttattacccattttatataaatagaaaccaaaatcataaatcatttcactcacacagtta 27252486  T
Q  376 caatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
     | | | | | ||||| |||||||||||||||| ||||| |||| |||||||||    
T  27252485 gagtatcagtctttcagatgacactcacttatcttagttctctc-tttctcctt 27252433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 367
Target Start/End: Original strand, 37032192 - 37032259
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctca 367  Q
    |||||||||||| |||||||||||| ||||||| ||||| |||||||||||||||| |||||| ||||    
T  37032192 aatgtagaaaattaatttattacccattttatataaataaaaactcaaaccctaaatcatttcactca 37032259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 48305660 - 48305746
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    |||| |||||||||||| | ||| |||| | || |||||||||||||||||||||| |||||||||| ||||| ||||||| |||||    
T  48305660 atttcaaaacacgggtatggaacgagtatcgggtatataggtacccaccccgaacctatacccaaacccgttccaaatgtaaaaaat 48305746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 44639318 - 44639257
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  44639318 gtaacgggtatataggtacccaccccgaacccatacccaaacccgttccaaatgtaaaaaat 44639257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 52198199 - 52198138
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  52198199 gtaacgggtatataggtacccaccccgaacccatacccaaacccgttccaaatgtaaaaaat 52198138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 53631992 - 53631903
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 295  Q
    |||||||| |||||| |  ||||||||||||| ||| || ||  ||||| || ||||||||||||||||||||||||||| |||||||||    
T  53631992 tgggtttgagttttcccaaattttaaaacacgtgtatgagacgggtaacgggtatataggtacccaccccgaacccatactcaaactcgt 53631903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 23546986 - 23547046
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  23546986 gtaacgggtatataggtacccaccccgaacccatacccaaactcgtcccaaatgtaaaaaa 23547046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 42243400 - 42243349
Alignment:
Q  281 catacccaaactcgttctaaatgtagaaaatcaatttattaccccttttata 332  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  42243400 catacccaaacccatcctaaatgtagaaaatcaatttattaccccttttata 42243349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 290
Target Start/End: Complemental strand, 34119726 - 34119660
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    |||||||||||||||||| || ||   |||| || ||||||||||||||||||||||||||||||||    
T  34119726 gattttaaaacacgggtatgagacggataacaggtatataggtacccaccccgaacccatacccaaa 34119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 40890384 - 40890279
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||| ||| | || |||||||||||||||| ||| |   |||||||||||||||||||||||  |||| |||| |||||||||||||||| ||| |    
T  40890384 gggatataagtatctacgccgaacccatacccaagctcatctcaaatgtagaaaatcaatttatta-tccttctatataaatagaaactcaaactctaga 40890286  T
Q  356 ccatttc 362  Q
     ||||||    
T  40890285 tcatttc 40890279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 4016044 - 4016133
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 295  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||   |||| || |||||||||||||| ||||||||||||||||||||||    
T  4016044 tgggtttgggttttccccgatttcaaaacatgggtatgggacggataacgggtatataggtacccactccgaacccatacccaaactcgt 4016133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 44172714 - 44172609
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  44172714 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgta 44172615  T
Q  306 gaaaat 311  Q
     |||||    
T  44172614 aaaaat 44172609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 44179414 - 44179309
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||| ||||||||||||||||||||||||||| ||| | |||||||    
T  44179414 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgta 44179315  T
Q  306 gaaaat 311  Q
     |||||    
T  44179314 aaaaat 44179309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 375
Target Start/End: Original strand, 3414537 - 3414702
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    |||||||| |||||  | |||||| ||||||| |||||  ||| ||||| |||||    |||| || |||||| |||||| ||||| ||| |  ||||||    
T  3414537 tgggtttgagtttttcccgattttcaaacacgagtacgggacaggtaacggggat----gtactcatcccgaatccatactcaaacccgtacctaatgta 3414632  T
Q  306 gaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtca 375  Q
    |||||||| |||| |||||||||| || ||||| |||   |||||||||| |||||| |||||| |||||    
T  3414633 gaaaatcattttaataccccttttctataaataaaaatcgaaaccctaaatcatttcactcacatagtca 3414702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 34154502 - 34154398
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| || |||||| | ||||| |||||| ||||| |||||  |||||  | |||||||||||||||||||||||||||||| || ||| | |||||||    
T  34154502 tgggtatgtgttttccccgatttcaaaacatgggtatgaaacgggtaacaagaatataggtacccaccccgaacccatacccatacccgtcccaaatgta 34154403  T
Q  306 gaaaa 310  Q
     ||||    
T  34154402 aaaaa 34154398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 7469778 - 7469877
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| ||||| |  ||||||||||| |  ||  ||||| || ||||||||||||||||||||||||||| ||||| ||| | |||||||    
T  7469778 tgggtatgggttttccctgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacacaaacccgtcccaaatgta 7469877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 3385875 - 3385988
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 324  Q
    |||| ||||||||||||||  ||| |||||  ||||||||||| ||||| |||| ||||||| |||| ||| |  |||||| ||||||| |||| || ||    
T  3385875 atttcaaaacacgggtacgggacaggtaacgaggatataggtagccaccacgaatccataccaaaacccgtacctaatgtaaaaaatcattttagtaacc 3385974  T
Q  325 cttttatagaaata 338  Q
    ||||| || |||||    
T  3385975 cttttctataaata 3385988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 29842378 - 29842317
Alignment:
Q  224 gattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 285  Q
    |||||||||||||||||| |  ||  ||||| || |||||||||||||||||||||||||||    
T  29842378 gattttaaaacacgggtatgggactggtaacgggaatataggtacccaccccgaacccatac 29842317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 31271301 - 31271342
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  31271301 gtaactgggatataggtacccaccccgaactcatactcaaac 31271342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 39655273 - 39655358
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || ||||||||||||||||| |||||||||||||||    
T  39655273 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaacccatacccaaac 39655358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 39728715 - 39728654
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||||| ||||||||||||||||||||||||||| ||| | ||||||| |||||    
T  39728715 gtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaat 39728654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 44252791 - 44252750
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  44252791 gtaacaggtatataggtacccaccccgaacccatacccaaac 44252750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 4557305 - 4557389
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    ||||||||||||||| | | ||| |||||| ||||| |  ||  |||||  | ||||||||||||||||||||||||||||||||    
T  4557305 tgggtttgggttttccccgttttcaaaacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccatacccaaa 4557389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 23580896 - 23580833
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    |||| |||||||| ||| |||||  ||||| || |||||||||||||| |||||||||||||||    
T  23580896 atttcaaaacacgagtatgaaacgggtaacgggtatataggtacccactccgaacccataccca 23580833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 31126848 - 31126899
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||||||| ||||||||||| ||||||||||||||| | ||||| ||||||    
T  31126848 atataggtatccaccccgaactcatacccaaactcgtcccaaatgcagaaaa 31126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 311
Target Start/End: Complemental strand, 49025770 - 49025664
Alignment:
Q  204 actgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatg 303  Q
    ||||||||||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||| || || |||||||||||||||| ||| | |||||    
T  49025770 actgggtttgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacacatcc-gaacccatacccaaacccgtcccaaatg 49025672  T
Q  304 tagaaaat 311  Q
    || |||||    
T  49025671 taaaaaat 49025664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 10043282 - 10043364
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||||||||||||| ||| ||| |||||| ||||| |  ||  ||||| ||| |||| | ||||||||||||||||||||||    
T  10043282 tgggtttgggttttccctggtttcaaaacatgggtatgggacgggtaacggggttatatgcacccaccccgaacccataccca 10043364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 48390817 - 48390899
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||||||||||| || |||||||||||||    
T  48390817 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggaatataggtacccatcctgaacccataccca 48390899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 22535885 - 22535946
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||| ||| ||||||||||||||||||| || |||||| ||||||||| |||||    
T  22535885 gtaacgggtatacaggcacccaccccgaacccatacacatactcgtcctaaatgtaaaaaat 22535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 29284380 - 29284339
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| || ||||||||||||| |||||||||||||||||||    
T  29284380 gtaacgggtatataggtacccagcccgaacccatacccaaac 29284339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 29284483 - 29284426
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 216  Q
    ||||||||| |||||| ||||||||||||| ||| || || ||| |||||||||||||    
T  29284483 tacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttgggt 29284426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 49580152 - 49580047
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  |||||  | ||||||||||||||| ||||||||||| ||||| ||| | |||||||    
T  49580152 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgagtatataggtacccacctcgaacccatactcaaacccgtcccaaatgta 49580053  T
Q  306 gaaaat 311  Q
     |||||    
T  49580052 aaaaat 49580047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 54317188 - 54317147
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| || ||||||||||||||||||||||||| |||||||    
T  54317188 gtaacgggtatataggtacccaccccgaacccattcccaaac 54317147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 1772337 - 1772373
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggattt 192  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  1772337 gggtacctgcccaaaccaatcccgatttgacggattt 1772373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 2487824 - 2487780
Alignment:
Q  265 gtacccaccccgaacccatacccaaactcgttctaaatgtagaaa 309  Q
    ||||||||||||||||||||||||||| |   |||||||||||||    
T  2487824 gtacccaccccgaacccatacccaaaccctacctaaatgtagaaa 2487780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 10043220 - 10043280
Alignment:
Q  156 gggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 216  Q
    ||||||||| ||| ||||| ||||||||||||| ||| || | |||| |||||||||||||    
T  10043220 gggtacccgaccataccaaccccaatttgacgggttttctccactttgactgggtttgggt 10043280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 14216450 - 14216406
Alignment:
Q  324 ccttttatagaaatagaaactcaaaccctaaaccatttcgctcac 368  Q
    ||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  14216450 ccttttatataaaaagaaactcaaaccctaaacaatttcactcac 14216406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 44953435 - 44953539
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| |  ||  ||||| || |||||||||| |||||||||| ||||| ||||| ||| | |||||||    
T  44953435 tgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtactcaccccgaactcatactcaaacccgtcccaaatgta 44953534  T
Q  306 gaaaa 310  Q
     ||||    
T  44953535 aaaaa 44953539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 407
Target Start/End: Original strand, 23533552 - 23533806
Alignment:
Q  154 gcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaa 253  Q
    |||||||||| ||| |||||| ||||||||||||| |||    || ||| ||||||||||||||||| | ||||| |||| ||||||| |  |   ||||    
T  23533552 gcgggtaccctcccgaaccaaacccaatttgacgggtttttcccgatttgactgggtttgggttttccccgatttgaaaatacgggtatgcgatgggtaa 23533651  T
Q  254 ctgggatataggtacccaccccgaacccatacccaaactcgttctaaatgt-agaaaatcaattta-ttaccccttttatagaaatagaaactcaaaccc 351  Q
     ||||||||| ||||||||  ||||||||||||||||||||| |  ||||| | |||||||||||| | ||||||||| || || ||||||| ||||| |    
T  23533652 -tgggatatatgtacccacttcgaacccatacccaaactcgtcccgaatgtaaaaaaatcaatttactaaccccttttgtataattagaaacccaaactc 23533750  T
Q  352 taaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttat 407  Q
    |||| |||||| |||||| ||||| | ||| | | ||||| |||||||||| ||||    
T  23533751 taaatcatttcactcacatagtcagagtctcagtgtttcagatgacactcatttat 23533806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 257 - 431
Target Start/End: Complemental strand, 3774111 - 3773937
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    |||||||||||||||||| |||||||||| ||||  ||| |  ||| ||||||||||||||||||||||||||||| || ||| ||| ||||| | |||     
T  3774111 ggatataggtacccaccctgaacccatactcaaatccgtcccgaatttagaaaatcaatttattaccccttttatataattaggaacccaaacgcaaaat 3774012  T
Q  357 catttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctttc 431  Q
    |||||  |||||||||||| | | | |   ||||||||||||| || ||||||||||| | || |||||||||||    
T  3774011 cattttactcacacagtcagagtttcagactttcatatgacacccatttatcatagttctatcttttctcctttc 3773937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 154 - 375
Target Start/End: Original strand, 19439958 - 19440180
Alignment:
Q  154 gcgggtacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaa 253  Q
    |||||||||| | | |||||| ||||||||||||| ||| |  |||||| |||||||||| |||||| ||||||| |||||||||||  |  |   ||||    
T  19439958 gcgggtaccctctcgaaccaaacccaatttgacgggttttccccgctttgactgggtttgagttttccctgatttgaaaacacgggtttgggatgggtaa 19440057  T
Q  254 ctgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa-tcaatttattaccccttttatagaaatagaaactcaaaccct 352  Q
      |||||||| ||||||||  ||||||||||||||||| ||| |  |||||| |||| ||||||||  ||||||||  || |||||||||| ||||| ||    
T  19440058 tggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaatttaccacccctttggtataaatagaaacccaaactct 19440157  T
Q  353 aaaccatttcgctcacacagtca 375  Q
    ||| |||||| |||||| |||||    
T  19440158 aaatcatttcactcacatagtca 19440180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 429
Target Start/End: Complemental strand, 3157131 - 3156953
Alignment:
Q  251 taactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaacc 350  Q
    |||| ||||||||||||||||| ||||||| |||||||||| ||| | |||  |||||||||||||||||||||||  |||| |||||||||| |||| |    
T  3157131 taacggggatataggtacccacaccgaacctatacccaaacccgtcccaaacatagaaaatcaatttattacccctactatataaatagaaacccaaatc 3157032  T
Q  351 ctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
    ||||| | |||| ||| |  ||||| | |||   | ||| | ||||||||||||||| |||||| |||| ||| |||||    
T  3157031 ctaaatcctttcactcgcgtagtcagagtcttggtcttttagatgacactcacttattatagttctctcttttttcctt 3156953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 371
Target Start/End: Complemental strand, 4101634 - 4101470
Alignment:
Q  207 gggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtag 306  Q
    ||||||||||||||  |||||| ||||||| |||||   |   || || |||||||| ||||||| || |||||||||||| ||| ||| || ||||| |    
T  4101634 gggtttgggttttccatgatttcaaaacacaggtacaggatgggttacagggatatatgtacccatcctgaacccataccctaacccgtcctgaatgttg 4101535  T
Q  307 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacaca 371  Q
    |||||||||||||||||  ||||||  ||||| ||||||||||||| || |||||| ||||||||    
T  4101534 aaaatcaatttattaccaattttatttaaataaaaactcaaacccttaatcatttcactcacaca 4101470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 367
Target Start/End: Original strand, 43550417 - 43550577
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    |||||||| |||||| | | ||||||||||| | ||||| ||  ||||  |||||||| |||| ||||| |||| ||||| ||||| ||| || |||||     
T  43550417 tgggtttgagttttccccgtttttaaaacacagatacgagactggtaatagggatatatgtactcaccc-gaactcatacacaaacccgtcctgaatgtg 43550515  T
Q  306 gaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctca 367  Q
    |||| || |||||||||||||| |||| |||||||||| ||||||||||| |||||| ||||    
T  43550516 gaaagtctatttattaccccttctatataaatagaaacccaaaccctaaatcatttcactca 43550577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 159 - 303
Target Start/End: Complemental strand, 24425520 - 24425376
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 258  Q
    |||| |||| |||||| ||||||||||||||||| || || ||| | ||||||||  ||||||||||||| |||||||||||| |  ||  ||||| ||     
T  24425520 taccagcccgaaccaaacccaatttgacggattttctccgttttgattgggtttgaattttctctgatttcaaaacacgggtatgggacgggtaacgggt 24425421  T
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatg 303  Q
    |||||||||||||||| || |||||  |||||| ||||| |||||    
T  24425420 atataggtacccaccctgaccccatttccaaacccgttccaaatg 24425376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 355
Target Start/End: Complemental strand, 29292797 - 29292646
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtac--ccaccccgaacccatacccaaactcgttctaaatg 303  Q
    ||||| ||| ||||| | ||||| ||||||||||||||| |   |||||  ||||||||||||  ||||||  |||||||||| ||||||||    ||||    
T  29292797 tgggtatggattttccccgatttcaaaacacgggtacgagatgggtaacatggatataggtacgcccaccctaaacccatacctaaactcgtctcgaatg 29292698  T
Q  304 tagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    ||||||||||||||| ||||||||||||| ||| |||||  |||||||||||    
T  29292697 tagaaaatcaatttactaccccttttatataaagagaaatccaaaccctaaa 29292646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 169 - 375
Target Start/End: Original strand, 23475226 - 23475433
Alignment:
Q  169 aaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtac 268  Q
    |||||| | ||||||||||| ||| |  |||||| ||||||||||||||||  | ||||| |||||||||||  |  |   ||||  |||||||| ||||    
T  23475226 aaccaaactcaatttgacgggttttccccgctttgactgggtttgggtttttcccgatttcaaaacacgggtttgggatgggtaatggggatatatgtac 23475325  T
Q  269 ccaccccgaacccatacccaaactcgttctaaatgtagaaaa-tcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctca 367  Q
    ||||  ||||||||||||||||| ||| |  |||||| |||| |||||||| ||||| |||| || ||||| |||| ||||| ||||| |||||| ||||    
T  23475326 ccacttcgaacccatacccaaacccgtcccgaatgtaaaaaaatcaatttactacccgttttgtataaataaaaacccaaactctaaatcatttcactca 23475425  T
Q  368 cacagtca 375  Q
    || |||||    
T  23475426 catagtca 23475433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 343
Target Start/End: Original strand, 8906589 - 8906727
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    |||||||| |||||||| ||||| |||||||| ||| || || | |||| ||| |||| |||||||||||||||||||| ||| ||  |||| |||||||    
T  8906589 tgggtttgagttttctccgatttcaaaacacgagtatgagacgaataacggggttatatgtacccaccccgaacccatatccatacctgttccaaatgta 8906688  T
Q  306 gaaaatcaatttattacccc-ttttatagaaatagaaac 343  Q
     ||||| | ||| ||||||| ||||||| ||||||||||    
T  8906689 aaaaattattttgttacccctttttatataaatagaaac 8906727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 429
Target Start/End: Original strand, 11472767 - 11472935
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaacca 358  Q
    |||||||||| ||||  |||| ||||||||||  ||| | ||||| |||||||||||||||||  ||||||||| ||||||||||  |||||||||| ||    
T  11472767 atataggtactcacct-gaactcatacccaaatccgtcccaaatg-agaaaatcaatttattataccttttatataaatagaaaccaaaaccctaaatca 11472864  T
Q  359 tttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
    |||| |||||  ||| | | ||| | | ||| | |||||||||||||||||||||| |||| | |||||||    
T  11472865 tttcactcacgtagttagagtctcagtcttttagatgacactcacttatcatagttctctcttatctcctt 11472935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 429
Target Start/End: Complemental strand, 37218047 - 37217874
Alignment:
Q  256 gggatataggtacccaccccgaacccataccc-aaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaa 354  Q
    |||||||| ||||| | ||||||| ||||||| |||| ||| || ||| ||||||||||||| |||| | ||||| || ||||||||||||||  |||||    
T  37218047 gggatataagtaccaagcccgaactcataccccaaacccgtcctgaatatagaaaatcaatt-attatctcttttgtataaatagaaactcaatgcctaa 37217949  T
Q  355 accatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttctcctt 429  Q
    | |||||  || ||||| ||| | |||   ||||||||||||||||||| |||||||||| |||| | |||||||    
T  37217948 atcattttactaacacaatcagagtctcggtttttcatatgacactcacatatcatagttctctcttctctcctt 37217874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 16866262 - 16866157
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| | |||||||||||| |  || |||||| || ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  16866262 tgggtatgggttttccccgatctcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgta 16866163  T
Q  306 gaaaat 311  Q
     |||||    
T  16866162 aaaaat 16866157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 288
Target Start/End: Complemental strand, 10072559 - 10072477
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccataccca 288  Q
    ||||| ||||||||| | ||||| |||||||||||| | |||  ||||| || ||||||||||||||||||||||||||||||    
T  10072559 tgggtatgggttttccccgatttcaaaacacgggtatggaacgggtaacgggtatataggtacccaccccgaacccataccca 10072477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 26623044 - 26622954
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgtt 296  Q
    ||||||||||||||| ||||||| |||||||||||| |  |   ||||  || ||||| ||||||||||||||||||||||||||||||||    
T  26623044 tgggtttgggttttccctgatttcaaaacacgggtatgggatgggtaatgggtatataagtacccaccccgaacccatacccaaactcgtt 26622954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 18825872 - 18825957
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||||||||||||||||||||| |||||||||    
T  18825872 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaac 18825957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 425
Target Start/End: Complemental strand, 31345525 - 31345400
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacac 399  Q
    |||||| |||||||||||| ||||  ||||||| |||||||||||||||| ||| | |||||| |||||||| ||| | ||| | |  || | |||||||    
T  31345525 aatgtaaaaaatcaatttactaccatttttatataaatagaaactcaaactctatatcatttcactcacacaatcaaagtctcagtcatttagatgacac 31345426  T
Q  400 tcacttatcatagttatctcatttct 425  Q
    |||||||||||| || |||| |||||    
T  31345425 tcacttatcataattctctcttttct 31345400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 32546285 - 32546200
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||| ||||  | ||||| |||| ||||||||| |||  ||||| |||||||| |||||||||||||||||||||||||||    
T  32546285 tgggtttggatttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaacccatacccaaac 32546200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 35074563 - 35074459
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||| |||||||||||||| |  ||  ||||| || ||||||||||||| ||||||||||||||||||| ||| | |||||||    
T  35074563 tgggtatgggttttccccgatcttaaaacacgggtatgggacgggtaacgggtatataggtacccaacccgaacccatacccaaacccgtcccaaatgta 35074464  T
Q  306 gaaaa 310  Q
     ||||    
T  35074463 aaaaa 35074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 290
Target Start/End: Complemental strand, 3920678 - 3920547
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactggg 258  Q
    ||||| ||| |||||| |||||||||| || |||    || ||| ||||||||||||||||| | ||||| ||||||| |||| |  ||   |||| ||     
T  3920678 tacccacccgaaccaaacccaatttgatgggtttttcccgttttgactgggtttgggttttccccgatttcaaaacactggtatgggacggataacaggt 3920579  T
Q  259 atataggtacccaccccgaacccatacccaaa 290  Q
    ||||||||||||||||||||||||||||||||    
T  3920578 atataggtacccaccccgaacccatacccaaa 3920547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 405
Target Start/End: Original strand, 6557827 - 6557925
Alignment:
Q  307 aaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcactt 405  Q
    ||||||| ||||||| || ||| |||||||||||| ||||||| ||||| |||||| |||||||| ||| | ||| | | ||||| |||||||||||||    
T  6557827 aaaatcagtttattatccttttcatagaaatagaatctcaaactctaaatcatttcactcacacaatcaaagtctcagtctttcagatgacactcactt 6557925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 311
Target Start/End: Original strand, 27850326 - 27850431
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| ||  |||||||||||| ||||||||||||||||||| ||| |  ||||||    
T  27850326 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaaacccgtcccgaatgta 27850425  T
Q  306 gaaaat 311  Q
    ||||||    
T  27850426 gaaaat 27850431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 45380156 - 45380096
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || |||||||||||||||||||||||||||| |||||||| | ||||||| ||||    
T  45380156 gtaacgggtatataggtacccaccccgaacccatacctaaactcgtcccaaatgtaaaaaa 45380096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 3226946 - 3227025
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatac 285  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||  ||||| || |||||||||||||||||||||||||||    
T  3226946 tgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatac 3227025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 291
Target Start/End: Complemental strand, 31426099 - 31426016
Alignment:
Q  208 ggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||| | ||||| |||| ||||||| || ||  ||||| |||||||| ||| ||||||||||| |||||||||||    
T  31426099 ggtttgggttttccccgatttaaaaatacgggtatgagacgggtaacggggatatatgtatccaccccgaacgcatacccaaac 31426016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 36251024 - 36251099
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtca 375  Q
    |||||||||||||||||||||||   ||||||| ||||| ||||| |||| |||||||||||| || | |||||||    
T  36251024 aatgtagaaaatcaatttattacatattttatataaataaaaactaaaactctaaaccatttcacttatacagtca 36251099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 48327532 - 48327449
Alignment:
Q  212 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 295  Q
    ||||||||||| ||||| |||| |||||||||  |  ||||| ||||||||||||| ||||| ||||| ||||| |||||||||    
T  48327532 tgggttttctccgatttcaaaatacgggtacggtatgagtaattgggatataggtatccacctcgaacacatactcaaactcgt 48327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 16079103 - 16079017
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 295  Q
    |||||||||||||| ||| | |||||||||||| |  ||  ||||| || |||||||| |||||||| |||| ||||||||||||||    
T  16079103 gtttgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtgcccaccccaaacctatacccaaactcgt 16079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 5377175 - 5377094
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    |||||||||||| | ||||| ||||||| |||| |  ||  ||||  || ||||||||||||||||||||||||||||||||    
T  5377175 gtttgggttttccccgatttcaaaacacaggtatgggacgggtaaagggtatataggtacccaccccgaacccatacccaaa 5377094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 12980470 - 12980385
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||| ||||||| | ||||| |||||||||||| |  ||  ||||  || ||||| |||||||||||||||||||||||||||    
T  12980470 tgggttttggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccatacccaaac 12980385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 17885558 - 17885453
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | |||||||||||| ||||| |  ||  ||||| || |||||||| || |||||||||||||||||| || ||| | |||||||    
T  17885558 tgggtatgggttttccccgattttaaaacatgggtatgggacgggtaacgggtatataggttccaaccccgaacccatacccatacccgtcccaaatgta 17885459  T
Q  306 gaaaat 311  Q
     |||||    
T  17885458 aaaaat 17885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 18684067 - 18683982
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||| |||||||| | ||||| |||| |||||||||  ||  ||||| |||||||| ||| ||||| |||||||||||||||||    
T  18684067 tgggttcgggttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacctcgaacccatacccaaac 18683982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 25782910 - 25782987
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacc 286  Q
    |||||||||||||| |||| ||||||||||||| || ||   |||  || ||||||||||||||||||||| ||||||    
T  25782910 gtttgggttttctccgattataaaacacgggtatgagacggataatgggtatataggtacccaccccgaactcatacc 25782987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 30650680 - 30650619
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||| || ||||||||||||||||||||||||||||||||  ||| | ||||||| |||||    
T  30650680 gtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgtaaaaaat 30650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 38152980 - 38152875
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||| ||||| | |||   |||| |  |||||||||||||||||||||||||||| |||| ||| | |||||||    
T  38152980 tgggtatgggttttccccgatttcaaaacatgggtatggaacggataacggctatataggtacccaccccgaacccatacctaaacccgtcccaaatgta 38152881  T
Q  306 gaaaat 311  Q
     |||||    
T  38152880 aaaaat 38152875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 41103749 - 41103644
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||||||||| |  ||   |||| || ||||| |||||||||||||||||||||  |||| ||| |||||||||    
T  41103749 tgggtatgggttttccccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaacccatacataaacccgtcctaaatgta 41103650  T
Q  306 gaaaat 311  Q
     |||||    
T  41103649 aaaaat 41103644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 10995837 - 10995933
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    |||||||||||| | ||||| || ||||||||| |  ||  ||||| ||| ||||  ||||||||||||||||||||||| || ||||| |||||||    
T  10995837 gtttgggttttccccgatttcaagacacgggtatgggacgggtaacagggttatatatacccaccccgaacccatacccatacccgttccaaatgta 10995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 18125272 - 18125332
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| | ||||||| ||||    
T  18125272 gtaacgggtatataggtacccaccccgaacgcatacccaaacccgtcccaaatgtaaaaaa 18125332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 21702708 - 21702648
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaa 310  Q
    ||||| || ||||||||||||||||||||||||||||| ||| ||| | ||||||| ||||    
T  21702708 gtaacgggtatataggtacccaccccgaacccataccccaacccgtcccaaatgtaaaaaa 21702648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 43507532 - 43507433
Alignment:
Q  212 tgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    ||||||||| | ||||| |||||| ||||| || ||  ||||| || ||||||| |||||||| ||||||||||| | |||||| | ||||||| |||||    
T  43507532 tgggttttccccgatttcaaaacatgggtatgagacgggtaacgggtatataggcacccaccctgaacccatacctatactcgtcccaaatgtaaaaaat 43507433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 7780048 - 7780002
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    |||||||||||||||||||||| |||||||||| ||| | |||||||    
T  7780048 atataggtacccaccccgaacctatacccaaacccgtcccaaatgta 7780002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 2630574 - 2630658
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||||| | ||||| |||||| ||||| |  ||  || || || |||||| ||||||||||||||||||||||||||    
T  2630574 tgggtttgggttttccccgattt-aaaacatgggtatgggacgggtgacgggtatatagatacccaccccgaacccatacccaaac 2630658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 17852004 - 17851947
Alignment:
Q  159 tacccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggt 216  Q
    ||||||||| |||||| |||||||||| |||||| || || ||| |||||||||||||    
T  17852004 tacccgcccgaaccaaacccaatttgatggattttctccgttttgactgggtttgggt 17851947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 22973481 - 22973396
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||||   ||||| |||| |||||||||  ||  ||||  |||||||  ||||||||| |||||||||||||||||    
T  22973481 tgggtttgggttttccacgatttcaaaatacgggtacgggacgggtaatggggatatctgtacccacctcgaacccatacccaaac 22973396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 362
Target Start/End: Complemental strand, 24903415 - 24903354
Alignment:
Q  301 atgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttc 362  Q
    ||||||||||  | ||| |||||||||||||| ||||| ||||| |||| ||||||||||||    
T  24903415 atgtagaaaactattttgttaccccttttatataaatataaactaaaacgctaaaccatttc 24903354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 291
Target Start/End: Complemental strand, 28309629 - 28309500
Alignment:
Q  162 ccgcccaaaccaatcccaatttgacggatttccttcgcttttactgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggata 261  Q
    ||||||||||||| ||| |||||| |  ||| | ||| |||  || |||||||||| || ||||||| |||| |||||||||  ||  ||||| || |||    
T  28309629 ccgcccaaaccaaccccgatttgatgagttttcctcgatttgtctaggtttgggttctccctgatttcaaaatacgggtacgggacgggtaacgggaata 28309530  T
Q  262 taggtacccaccccgaacccatacccaaac 291  Q
    || ||| | ||||||||| |||||||||||    
T  28309529 tatgtatctaccccgaactcatacccaaac 28309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 40335734 - 40335811
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcaca 377  Q
    ||||||||||||||| ||||||||| ||||||| | ||||||| | ||| | | || |||||| |||| |||||||||    
T  40335734 aatgtagaaaatcaacttattaccctttttatatacatagaaaattaaagcatgaatcatttcactcatacagtcaca 40335811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 291
Target Start/End: Complemental strand, 17851894 - 17851862
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||||||| |||||||||||||||||||    
T  17851894 atataggtacccatcccgaacccatacccaaac 17851862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 37196051 - 37196103
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    |||||| ||||||||||||| |||||||||||| |||  |||||||| |||||    
T  37196051 atatagctacccaccccgaatccatacccaaacccgtcataaatgtaaaaaat 37196103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 37579311 - 37579271
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaa 290  Q
    ||||| || |||||||||||||||||||||| |||||||||    
T  37579311 gtaacgggtatataggtacccaccccgaacctatacccaaa 37579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 291
Target Start/End: Original strand, 44794084 - 44794112
Alignment:
Q  263 aggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||||||||||||||||||||    
T  44794084 aggtacccaccccgaacccatacccaaac 44794112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 45885818 - 45885870
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    |||||||||||||||||||||||||||| |||  ||| | ||||||| |||||    
T  45885818 atataggtacccaccccgaacccataccaaaatccgtcccaaatgtaaaaaat 45885870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 48708656 - 48708759
Alignment:
Q  257 ggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaac 356  Q
    ||||||||||| ||||||  || |||||| |||||||||||  |||||  ||||| | |||| || |||||||||| |  |||||| ||||||||||||     
T  48708656 ggatataggtatccacccgaaatccatactcaaactcgttc-gaatgtgtaaaattactttagtaacccttttatatacttagaaattcaaaccctaaat 48708754  T
Q  357 cattt 361  Q
    |||||    
T  48708755 cattt 48708759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 206 - 293
Target Start/End: Complemental strand, 211452 - 211365
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactc 293  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||  ||||| |||||||| |||||||||||||||||||||||||||||    
T  211452 tgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaactc 211365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 33481 - 33392
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgt 295  Q
    ||||||||||||||| | ||||| |||||||||||| |  ||  ||||| || ||||| |||||||||||||||||||||||||||||||    
T  33481 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaactcgt 33392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 429
Target Start/End: Original strand, 4600 - 4803
Alignment:
Q  225 attttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccc 324  Q
    |||| |||| ||||||| |  ||| ||||| ||||||||| |||||||| |||||||||||| || |    | | ||||||||||||||| |||| ||||    
T  4600 atttcaaaatacgggtatgggacaggtaacagggatatagctacccaccacgaacccatacctaagccacct-tgaatgtagaaaatcaaattataaccc 4698  T
Q  325 cttttatagaaatagaaactcaaaccctaaaccatttcgctcacacagtcacaatctgaatttttcatatgacactcacttatcatagttatctcatttc 424  Q
    |||||||| |||||||||   |||| ||||| |||||| |||||||||||| | ||    | ||| | || ||||||||||||||||||| |||| |||     
T  4699 cttttatataaatagaaatcaaaactctaaatcatttcactcacacagtcagagtcacggtcttttagataacactcacttatcatagttctctcttttt 4798  T
Q  425 tcctt 429  Q
    |||||    
T  4799 tcctt 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 14896 - 14790
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaa 355  Q
    |||||||  |||||||||| |||| ||||||||||| ||| || || ||| || ||||||||||| ||||||||||| ||||||||||| ||||  ||||    
T  14896 gggatattagtacccaccctgaactcatacccaaacccgtcctgaaggtaaaacatcaatttatttccccttttatataaatagaaacttaaacattaaa 14797  T
Q  356 ccatttc 362  Q
     ||||||    
T  14796 tcatttc 14790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 1105 - 1037
Alignment:
Q  300 aatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaaccctaaaccatttcgctcac 368  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||| | |||| |||||| |||||    
T  1105 aatgtagaaaattaatttattacccattttatataaatagaaactcaaatcttaaatcatttcactcac 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 367
Target Start/End: Original strand, 17499 - 17616
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattaccccttttatagaaatagaaactcaaac 349  Q
    ||||| |||||||||||| ||| ||| ||||| || ||||||  || |  |||||| |||| | ||||||||||| ||||||| |||||||||| |||||    
T  17499 gtaacggggatataggtatccatcccaaacccttatccaaacatgtaccgaatgtataaaacccatttattacccattttatataaatagaaacgcaaac 17598  T
Q  350 cctaaaccatttcgctca 367  Q
    | |||| |||||| ||||    
T  17599 cataaatcatttcactca 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 3054 - 2972
Alignment:
Q  209 gtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||||||| | ||||| |||| ||||||||   ||   ||||||||||||| ||||||||||||||||||||| |||||    
T  3054 gtttgggttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaacccatactcaaac 2972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 90685 - 90580
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaactcgttctaaatgta 305  Q
    ||||| ||||||||| | ||||| |||||||||||| || ||   |||| || |||| ||||||| |||||||||||||| |||| |||| || |||| |    
T  90685 tgggtatgggttttccccgatttcaaaacacgggtatgagacggttaacgggtatattggtaccctccccgaacccatacacaaattcgtcctgaatgca 90586  T
Q  306 gaaaat 311  Q
    ||||||    
T  90585 gaaaat 90580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 105513 - 105554
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  105513 gtaacagggatatatgtacccaccccgaacccatacccaaac 105554  T

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Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 291
Target Start/End: Original strand, 128171 - 128206
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaac 291  Q
    |||||||| |||||||||||||||||||||||||||    
T  128171 gggatatatgtacccaccccgaacccatacccaaac 128206  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 14810 - 14758
Alignment:
Q  259 atataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaat 311  Q
    |||||||||||||||  |||| ||||||||||||||| | |||||||||||||    
T  14810 atataggtacccaccttgaacacatacccaaactcgtcccaaatgtagaaaat 14758  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 20789 - 20854
Alignment:
Q  256 gggatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttatta 321  Q
    ||||||||  || ||||| ||||||||||| ||||| |||||  |||||| |||||||||||||||    
T  20789 gggatataaatatccacctcgaacccatactcaaacccgttccgaatgtaaaaaatcaatttatta 20854  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 55941 - 55982
Alignment:
Q  250 gtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||| |||||||| |||||||||||||| ||||||||||||    
T  55941 gtaacagggatatatgtacccaccccgaatccatacccaaac 55982  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 107443 - 107508
Alignment:
Q  258 gatataggtacccaccccgaacccatacccaaactcgttctaaatgtagaaaatcaatttattacc 323  Q
    |||||| ||||||||||||||| ||||  |||||||||||  ||||| |||||| | |||||||||    
T  107443 gatataagtacccaccccgaactcatattcaaactcgttccgaatgttgaaaattactttattacc 107508  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 67837 - 67752
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||| ||||| | |||||||||| |||| ||||  ||   |||| |||||||| ||||||||||||| || ||||||||||    
T  67837 tgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgtacccaccccgagcctatacccaaac 67752  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 75680 - 75595
Alignment:
Q  206 tgggtttgggttttctctgattttaaaacacgggtacgaaacaagtaactgggatataggtacccaccccgaacccatacccaaac 291  Q
    ||||||||| ||||| | |||||||||| |||| ||||  ||   |||| |||||||| ||||||||||||| || ||||||||||    
T  75680 tgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgtacccaccccgagcctatacccaaac 75595  T

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