View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16056_low_52 (Length: 249)

Name: NF16056_low_52
Description: NF16056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16056_low_52
NF16056_low_52
[»] chr1 (61 HSPs)
chr1 (64-239)||(84473-84648)
chr1 (64-235)||(24040983-24041155)
chr1 (65-239)||(1430491-1430666)
chr1 (118-239)||(30006206-30006327)
chr1 (67-239)||(49894807-49894979)
chr1 (64-195)||(38132189-38132322)
chr1 (121-239)||(28751363-28751481)
chr1 (121-239)||(48259818-48259936)
chr1 (121-239)||(50349812-50349936)
chr1 (118-238)||(11650134-11650254)
chr1 (124-239)||(37437358-37437474)
chr1 (75-239)||(10690910-10691074)
chr1 (120-234)||(43105562-43105676)
chr1 (67-199)||(43755054-43755185)
chr1 (120-236)||(5317535-5317651)
chr1 (118-239)||(6332243-6332364)
chr1 (118-239)||(12002322-12002443)
chr1 (121-234)||(1428945-1429059)
chr1 (122-239)||(43929764-43929881)
chr1 (121-238)||(17919777-17919893)
chr1 (139-223)||(45749470-45749554)
chr1 (118-196)||(17806373-17806451)
chr1 (118-196)||(254909-254989)
chr1 (118-239)||(40060861-40060982)
chr1 (121-238)||(52403555-52403672)
chr1 (124-196)||(26252202-26252274)
chr1 (124-196)||(42650247-42650319)
chr1 (64-108)||(48259964-48260008)
chr1 (121-196)||(672280-672354)
chr1 (121-239)||(44583851-44583968)
chr1 (135-236)||(2245881-2245982)
chr1 (64-101)||(22664937-22664974)
chr1 (64-101)||(26252116-26252153)
chr1 (118-196)||(44582776-44582856)
chr1 (121-196)||(2459087-2459160)
chr1 (64-108)||(11650056-11650100)
chr1 (64-108)||(12851739-12851783)
chr1 (67-107)||(45377261-45377301)
chr1 (64-196)||(9552353-9552484)
chr1 (121-239)||(15698705-15698824)
chr1 (118-196)||(22665015-22665091)
chr1 (18-134)||(15698835-15698951)
chr1 (69-196)||(50591316-50591446)
chr1 (118-196)||(5854222-5854302)
chr1 (64-101)||(15647178-15647215)
chr1 (67-108)||(17919930-17919971)
chr1 (135-196)||(28200220-28200281)
chr1 (67-108)||(40061007-40061048)
chr1 (67-108)||(44582890-44582931)
chr1 (67-108)||(50158417-50158458)
chr1 (64-108)||(255024-255068)
chr1 (64-108)||(5317687-5317731)
chr1 (64-108)||(12002244-12002288)
chr1 (118-214)||(48319981-48320076)
chr1 (65-108)||(11134571-11134614)
chr1 (64-108)||(50349966-50350012)
chr1 (64-135)||(26582923-26582994)
chr1 (118-164)||(45377180-45377226)
chr1 (65-101)||(1428865-1428901)
chr1 (64-108)||(2459006-2459050)
chr1 (64-108)||(17806485-17806529)
[»] chr7 (56 HSPs)
chr7 (118-239)||(42121619-42121740)
chr7 (64-239)||(18886668-18886843)
chr7 (123-239)||(17869319-17869435)
chr7 (118-236)||(33056242-33056361)
chr7 (118-218)||(34733388-34733486)
chr7 (116-216)||(42010553-42010653)
chr7 (121-239)||(3680878-3680996)
chr7 (118-235)||(22627313-22627430)
chr7 (118-239)||(41905890-41906011)
chr7 (1-108)||(42121488-42121593)
chr7 (121-239)||(48838635-48838758)
chr7 (118-239)||(34002087-34002209)
chr7 (121-216)||(42259527-42259622)
chr7 (117-235)||(19906490-19906608)
chr7 (118-196)||(28044139-28044217)
chr7 (127-196)||(10684827-10684896)
chr7 (127-196)||(26963567-26963636)
chr7 (127-196)||(39117486-39117555)
chr7 (127-239)||(32345789-32345901)
chr7 (135-199)||(40207385-40207449)
chr7 (120-238)||(1103563-1103681)
chr7 (118-236)||(26527356-26527473)
chr7 (117-238)||(36447567-36447688)
chr7 (64-108)||(1103483-1103527)
chr7 (64-108)||(18733452-18733496)
chr7 (64-108)||(22597229-22597273)
chr7 (64-108)||(30514972-30515016)
chr7 (64-108)||(40298846-40298890)
chr7 (118-170)||(40298924-40298976)
chr7 (121-164)||(5723082-5723125)
chr7 (121-196)||(32275275-32275350)
chr7 (127-193)||(6521905-6521971)
chr7 (64-106)||(19906413-19906455)
chr7 (70-108)||(22627457-22627495)
chr7 (67-108)||(19288458-19288499)
chr7 (71-108)||(19920382-19920419)
chr7 (127-196)||(36447067-36447136)
chr7 (64-108)||(3681033-3681077)
chr7 (68-108)||(5723006-5723046)
chr7 (64-108)||(17869236-17869280)
chr7 (64-108)||(28044242-28044286)
chr7 (64-108)||(32275203-32275247)
chr7 (118-170)||(33845434-33845486)
chr7 (64-108)||(36836058-36836102)
chr7 (64-108)||(43813455-43813499)
chr7 (120-239)||(47272230-47272349)
chr7 (129-183)||(19277056-19277110)
chr7 (127-196)||(31416748-31416817)
chr7 (64-101)||(32873281-32873318)
chr7 (64-101)||(36447188-36447225)
chr7 (67-108)||(42044090-42044131)
chr7 (64-101)||(42753706-42753743)
chr7 (118-238)||(30833051-30833170)
chr7 (64-108)||(31416862-31416906)
chr7 (64-108)||(32345946-32345990)
chr7 (64-108)||(41906044-41906088)
[»] chr4 (66 HSPs)
chr4 (64-239)||(32140944-32141119)
chr4 (64-239)||(21045151-21045327)
chr4 (118-237)||(34360078-34360197)
chr4 (64-197)||(51930595-51930728)
chr4 (64-235)||(39671068-39671238)
chr4 (64-239)||(56556237-56556410)
chr4 (118-239)||(36805408-36805529)
chr4 (121-236)||(45520419-45520534)
chr4 (120-218)||(15501133-15501231)
chr4 (121-218)||(34096092-34096189)
chr4 (119-236)||(52732665-52732782)
chr4 (64-239)||(31817157-31817331)
chr4 (64-196)||(50072276-50072402)
chr4 (118-239)||(44855317-44855438)
chr4 (118-196)||(19849157-19849235)
chr4 (124-218)||(37445739-37445833)
chr4 (120-236)||(30022143-30022258)
chr4 (135-239)||(47321237-47321341)
chr4 (120-239)||(42672464-42672583)
chr4 (118-235)||(38761788-38761903)
chr4 (67-196)||(54233844-54233969)
chr4 (124-239)||(43421082-43421197)
chr4 (118-196)||(54512096-54512174)
chr4 (127-196)||(17499716-17499785)
chr4 (127-196)||(24259695-24259764)
chr4 (17-108)||(29840025-29840114)
chr4 (64-170)||(38692409-38692515)
chr4 (127-196)||(45889647-45889716)
chr4 (120-236)||(3093424-3093539)
chr4 (64-108)||(19282523-19282567)
chr4 (127-239)||(34124379-34124491)
chr4 (127-196)||(4408176-4408245)
chr4 (64-108)||(6462004-6462048)
chr4 (64-108)||(15501258-15501302)
chr4 (64-108)||(24259606-24259650)
chr4 (64-108)||(52732594-52732638)
chr4 (126-236)||(11835186-11835295)
chr4 (140-239)||(56422957-56423056)
chr4 (150-239)||(51737280-51737367)
chr4 (67-108)||(28116243-28116284)
chr4 (127-196)||(31941642-31941711)
chr4 (67-108)||(45903518-45903559)
chr4 (127-196)||(51434256-51434325)
chr4 (64-108)||(1868211-1868255)
chr4 (120-164)||(29289924-29289968)
chr4 (187-239)||(29840197-29840249)
chr4 (64-108)||(30022063-30022107)
chr4 (64-108)||(31941553-31941597)
chr4 (64-108)||(43421228-43421272)
chr4 (64-108)||(44855237-44855281)
chr4 (64-108)||(47321139-47321183)
chr4 (65-108)||(17317956-17317999)
chr4 (184-239)||(30492859-30492914)
chr4 (172-239)||(32140834-32140901)
chr4 (64-98)||(17499840-17499874)
chr4 (121-196)||(28116321-28116398)
chr4 (121-196)||(55126573-55126650)
chr4 (71-108)||(31987306-31987343)
chr4 (71-108)||(45520570-45520607)
chr4 (64-108)||(6232147-6232191)
chr4 (64-108)||(6510113-6510157)
chr4 (16-52)||(19878855-19878891)
chr4 (64-108)||(22212336-22212380)
chr4 (118-170)||(31987377-31987429)
chr4 (64-108)||(35928486-35928530)
chr4 (135-199)||(35928579-35928643)
[»] chr3 (86 HSPs)
chr3 (69-236)||(35239390-35239556)
chr3 (118-239)||(38457537-38457658)
chr3 (64-197)||(790095-790228)
chr3 (124-236)||(2567970-2568082)
chr3 (77-238)||(38165617-38165783)
chr3 (118-239)||(27483148-27483269)
chr3 (118-239)||(46362965-46363086)
chr3 (118-236)||(1340887-1341005)
chr3 (118-239)||(25061772-25061891)
chr3 (118-239)||(44648365-44648487)
chr3 (118-239)||(26965463-26965584)
chr3 (65-218)||(53716029-53716180)
chr3 (118-236)||(44854391-44854508)
chr3 (124-239)||(2662447-2662562)
chr3 (120-239)||(31290929-31291047)
chr3 (121-239)||(83375-83493)
chr3 (121-239)||(647547-647665)
chr3 (121-236)||(37225553-37225668)
chr3 (118-239)||(36771531-36771652)
chr3 (118-234)||(40048953-40049067)
chr3 (127-239)||(20512449-20512561)
chr3 (121-196)||(19552611-19552686)
chr3 (129-218)||(41287166-41287255)
chr3 (124-239)||(43580560-43580677)
chr3 (127-196)||(51381812-51381881)
chr3 (127-196)||(54933201-54933270)
chr3 (64-108)||(37225705-37225749)
chr3 (127-239)||(54261503-54261615)
chr3 (124-239)||(5244668-5244782)
chr3 (65-108)||(27483294-27483337)
chr3 (118-196)||(34059944-34060020)
chr3 (118-199)||(27039404-27039486)
chr3 (135-196)||(2988606-2988667)
chr3 (64-101)||(2988726-2988763)
chr3 (127-196)||(25722457-25722526)
chr3 (127-196)||(43169422-43169491)
chr3 (127-196)||(53560752-53560821)
chr3 (118-170)||(3000830-3000882)
chr3 (118-170)||(4391981-4392033)
chr3 (64-108)||(13485915-13485959)
chr3 (64-108)||(26965609-26965653)
chr3 (64-108)||(43169333-43169377)
chr3 (64-108)||(46363121-46363165)
chr3 (64-108)||(54933315-54933359)
chr3 (119-170)||(16240654-16240705)
chr3 (118-214)||(27027810-27027910)
chr3 (118-169)||(43599855-43599906)
chr3 (64-107)||(44648512-44648555)
chr3 (67-108)||(25722571-25722612)
chr3 (127-196)||(43687879-43687948)
chr3 (64-108)||(83295-83339)
chr3 (64-108)||(19552539-19552583)
chr3 (64-108)||(25061703-25061747)
chr3 (64-108)||(36771677-36771721)
chr3 (124-196)||(42007058-42007130)
chr3 (116-156)||(42791378-42791418)
chr3 (64-108)||(43580474-43580518)
chr3 (64-108)||(43687996-43688040)
chr3 (64-108)||(51381720-51381764)
chr3 (64-145)||(52202364-52202445)
chr3 (64-107)||(36310361-36310404)
chr3 (184-239)||(42857046-42857101)
chr3 (120-218)||(4476338-4476434)
chr3 (118-164)||(15514755-15514801)
chr3 (121-196)||(32303901-32303978)
chr3 (117-196)||(36541567-36541648)
chr3 (120-218)||(42740302-42740399)
chr3 (172-234)||(43599508-43599570)
chr3 (71-108)||(1341030-1341067)
chr3 (138-235)||(9167648-9167744)
chr3 (64-101)||(27027732-27027769)
chr3 (121-170)||(35099390-35099439)
chr3 (71-108)||(41287082-41287119)
chr3 (141-218)||(43736846-43736922)
chr3 (64-101)||(44854314-44854351)
chr3 (71-108)||(45095559-45095596)
chr3 (64-108)||(2568113-2568157)
chr3 (64-108)||(3000751-3000795)
chr3 (72-108)||(15514836-15514872)
chr3 (64-108)||(20512607-20512651)
chr3 (64-108)||(22730924-22730968)
chr3 (144-236)||(22731035-22731126)
chr3 (72-108)||(32304015-32304051)
chr3 (64-108)||(34059875-34059919)
chr3 (118-183)||(44645415-44645482)
chr3 (64-108)||(49470788-49470832)
[»] chr2 (46 HSPs)
chr2 (64-236)||(34225771-34225944)
chr2 (65-194)||(4766212-4766341)
chr2 (71-239)||(14378203-14378371)
chr2 (118-239)||(7743477-7743598)
chr2 (118-237)||(29795156-29795275)
chr2 (118-239)||(40987237-40987356)
chr2 (64-239)||(14698010-14698187)
chr2 (120-239)||(24775267-24775386)
chr2 (118-218)||(1381817-1381915)
chr2 (118-239)||(40410519-40410640)
chr2 (129-218)||(36360351-36360440)
chr2 (118-239)||(37106938-37107061)
chr2 (118-196)||(1298778-1298856)
chr2 (121-239)||(4840682-4840800)
chr2 (13-108)||(4536523-4536616)
chr2 (127-239)||(25332657-25332769)
chr2 (117-196)||(16316784-16316863)
chr2 (120-199)||(43460851-43460930)
chr2 (121-239)||(43388612-43388730)
chr2 (64-108)||(29795300-29795344)
chr2 (135-238)||(775840-775943)
chr2 (120-239)||(1360255-1360365)
chr2 (124-239)||(39866626-39866741)
chr2 (138-239)||(11171839-11171940)
chr2 (64-108)||(1360175-1360219)
chr2 (64-108)||(4840837-4840881)
chr2 (64-108)||(33093366-33093410)
chr2 (64-157)||(45148014-45148106)
chr2 (66-108)||(7743401-7743443)
chr2 (118-196)||(41984494-41984575)
chr2 (67-108)||(1298890-1298931)
chr2 (127-196)||(4566119-4566188)
chr2 (64-99)||(18374883-18374918)
chr2 (119-234)||(42969967-42970081)
chr2 (184-234)||(4536704-4536754)
chr2 (124-218)||(43344199-43344293)
chr2 (127-196)||(2459860-2459929)
chr2 (67-108)||(16316710-16316751)
chr2 (64-101)||(45372649-45372686)
chr2 (64-108)||(775995-776039)
chr2 (64-108)||(2459771-2459815)
chr2 (64-108)||(6591963-6592007)
chr2 (64-108)||(10580968-10581012)
chr2 (117-158)||(33093443-33093486)
chr2 (64-108)||(43344331-43344375)
chr2 (64-108)||(43388767-43388811)
[»] chr8 (60 HSPs)
chr8 (64-239)||(38329010-38329184)
chr8 (64-204)||(8471279-8471421)
chr8 (67-199)||(18666540-18666672)
chr8 (67-197)||(7129302-7129432)
chr8 (117-239)||(6839282-6839404)
chr8 (118-239)||(7612574-7612694)
chr8 (118-239)||(32326680-32326801)
chr8 (121-239)||(45187251-45187367)
chr8 (68-218)||(41790117-41790268)
chr8 (118-239)||(22601211-22601332)
chr8 (118-218)||(30789011-30789111)
chr8 (120-196)||(11257618-11257694)
chr8 (121-239)||(27109775-27109894)
chr8 (135-238)||(36915458-36915561)
chr8 (118-239)||(9022471-9022593)
chr8 (126-235)||(34168171-34168280)
chr8 (120-196)||(14541744-14541820)
chr8 (120-236)||(2067778-2067894)
chr8 (120-180)||(11336047-11336107)
chr8 (120-204)||(16209019-16209103)
chr8 (64-108)||(22601134-22601178)
chr8 (66-108)||(34461695-34461737)
chr8 (121-218)||(39970404-39970492)
chr8 (73-234)||(2812817-2812968)
chr8 (118-170)||(8382502-8382554)
chr8 (64-108)||(14541856-14541900)
chr8 (64-108)||(27109931-27109975)
chr8 (67-107)||(27416502-27416542)
chr8 (119-238)||(32737843-32737961)
chr8 (64-108)||(36915365-36915409)
chr8 (120-234)||(41414911-41415024)
chr8 (67-108)||(16208951-16208992)
chr8 (121-158)||(26439045-26439082)
chr8 (135-196)||(27416596-27416657)
chr8 (64-101)||(39970323-39970360)
chr8 (64-108)||(156239-156283)
chr8 (64-108)||(9022393-9022437)
chr8 (118-239)||(34461537-34461660)
chr8 (127-235)||(42709949-42710056)
chr8 (121-164)||(32661384-32661427)
chr8 (69-108)||(34168316-34168355)
chr8 (121-199)||(29931236-29931314)
chr8 (135-180)||(1774085-1774130)
chr8 (64-101)||(2803355-2803392)
chr8 (64-101)||(7612496-7612533)
chr8 (71-108)||(8382588-8382625)
chr8 (64-93)||(11335840-11335869)
chr8 (173-238)||(24732079-24732144)
chr8 (64-108)||(1774170-1774214)
chr8 (118-170)||(2803270-2803322)
chr8 (120-164)||(3095534-3095578)
chr8 (144-236)||(5588426-5588517)
chr8 (64-108)||(5588584-5588628)
chr8 (118-170)||(8107193-8107245)
chr8 (16-52)||(8471465-8471501)
chr8 (64-108)||(11257540-11257584)
chr8 (64-108)||(29931342-29931386)
chr8 (18-50)||(34461715-34461747)
chr8 (64-108)||(35052469-35052513)
chr8 (64-108)||(45187395-45187439)
[»] scaffold0072 (1 HSPs)
scaffold0072 (121-236)||(12040-12154)
[»] chr6 (35 HSPs)
chr6 (120-239)||(12828636-12828755)
chr6 (118-239)||(29915618-29915740)
chr6 (118-239)||(29927284-29927405)
chr6 (118-239)||(31275596-31275717)
chr6 (118-196)||(26669096-26669174)
chr6 (118-195)||(10494760-10494838)
chr6 (64-108)||(29915539-29915583)
chr6 (64-108)||(29927205-29927249)
chr6 (64-108)||(31275752-31275796)
chr6 (118-196)||(1924672-1924750)
chr6 (127-196)||(17345132-17345201)
chr6 (64-108)||(12828791-12828835)
chr6 (64-108)||(32258720-32258764)
chr6 (118-239)||(23936538-23936658)
chr6 (121-156)||(30627170-30627205)
chr6 (64-106)||(34439525-34439567)
chr6 (124-196)||(25932713-25932785)
chr6 (127-196)||(34576631-34576700)
chr6 (64-108)||(4123965-4124009)
chr6 (18-108)||(6140555-6140642)
chr6 (18-108)||(6143039-6143126)
chr6 (64-108)||(11785212-11785255)
chr6 (69-108)||(3015919-3015958)
chr6 (69-108)||(26669208-26669247)
chr6 (64-94)||(19416857-19416887)
chr6 (147-196)||(6992508-6992557)
chr6 (64-108)||(1924774-1924818)
chr6 (64-108)||(4132085-4132129)
chr6 (64-108)||(8052343-8052387)
chr6 (64-108)||(10494872-10494916)
chr6 (64-108)||(17345246-17345290)
chr6 (64-108)||(30627089-30627133)
chr6 (124-156)||(32258806-32258838)
chr6 (123-218)||(34439384-34439480)
chr6 (64-108)||(34576542-34576586)
[»] chr5 (61 HSPs)
chr5 (64-239)||(12167565-12167736)
chr5 (64-192)||(31889741-31889870)
chr5 (120-239)||(43257815-43257934)
chr5 (64-236)||(4011618-4011790)
chr5 (118-239)||(166604-166725)
chr5 (64-239)||(14980006-14980193)
chr5 (67-234)||(8960995-8961162)
chr5 (118-239)||(36660504-36660623)
chr5 (118-239)||(36783432-36783553)
chr5 (118-239)||(4751485-4751606)
chr5 (118-223)||(39059882-39059987)
chr5 (139-239)||(4967446-4967546)
chr5 (127-239)||(27652274-27652386)
chr5 (67-156)||(41845344-41845433)
chr5 (121-196)||(34171243-34171318)
chr5 (153-239)||(34919847-34919933)
chr5 (127-196)||(793602-793671)
chr5 (118-239)||(4742221-4742342)
chr5 (127-196)||(33822499-33822568)
chr5 (127-196)||(42329542-42329611)
chr5 (64-108)||(166759-166803)
chr5 (64-108)||(793716-793760)
chr5 (18-108)||(36660382-36660470)
chr5 (64-108)||(42329656-42329700)
chr5 (120-218)||(7388168-7388264)
chr5 (121-239)||(15400251-15400370)
chr5 (118-239)||(16886153-16886267)
chr5 (126-180)||(31557355-31557409)
chr5 (64-108)||(4371362-4371406)
chr5 (64-108)||(13066712-13066756)
chr5 (64-108)||(27658682-27658726)
chr5 (64-108)||(27810345-27810389)
chr5 (184-239)||(4371493-4371548)
chr5 (18-108)||(4751641-4751731)
chr5 (71-108)||(15400177-15400214)
chr5 (67-108)||(32690841-32690882)
chr5 (118-196)||(33584971-33585051)
chr5 (118-196)||(36296130-36296210)
chr5 (121-170)||(38982169-38982218)
chr5 (64-108)||(4742377-4742421)
chr5 (64-108)||(12992063-12992107)
chr5 (120-164)||(28640161-28640205)
chr5 (121-196)||(29044799-29044875)
chr5 (64-108)||(29653624-29653668)
chr5 (64-108)||(31557445-31557489)
chr5 (68-108)||(33822613-33822653)
chr5 (64-108)||(34171163-34171207)
chr5 (64-108)||(38982255-38982299)
chr5 (64-107)||(32963118-32963161)
chr5 (184-234)||(12992196-12992246)
chr5 (120-170)||(32690755-32690805)
chr5 (120-218)||(33693810-33693907)
chr5 (121-154)||(4371443-4371476)
chr5 (64-93)||(24436585-24436614)
chr5 (127-196)||(29653510-29653579)
chr5 (118-163)||(41566861-41566906)
chr5 (71-108)||(43257961-43257998)
chr5 (64-108)||(17674207-17674251)
chr5 (64-108)||(33585085-33585129)
chr5 (64-92)||(34919752-34919780)
chr5 (64-108)||(39059805-39059849)
[»] scaffold0119 (2 HSPs)
scaffold0119 (118-196)||(1619-1697)
scaffold0119 (69-108)||(1546-1585)
[»] scaffold0238 (1 HSPs)
scaffold0238 (117-227)||(16007-16116)
[»] scaffold0047 (2 HSPs)
scaffold0047 (127-196)||(70451-70520)
scaffold0047 (64-108)||(70565-70609)
[»] scaffold0886 (1 HSPs)
scaffold0886 (118-239)||(4063-4185)
[»] scaffold0519 (1 HSPs)
scaffold0519 (120-158)||(7736-7774)
[»] scaffold0580 (4 HSPs)
scaffold0580 (160-236)||(1692-1768)
scaffold0580 (160-236)||(9431-9507)
scaffold0580 (67-97)||(1642-1672)
scaffold0580 (67-97)||(9381-9411)
[»] scaffold0194 (2 HSPs)
scaffold0194 (64-108)||(8156-8200)
scaffold0194 (118-156)||(8236-8274)
[»] scaffold0189 (2 HSPs)
scaffold0189 (187-239)||(13023-13075)
scaffold0189 (64-101)||(13176-13213)
[»] scaffold0003 (2 HSPs)
scaffold0003 (64-108)||(321724-321768)
scaffold0003 (128-196)||(321814-321882)
[»] scaffold0007 (1 HSPs)
scaffold0007 (120-170)||(158178-158228)


Alignment Details
Target: chr1 (Bit Score: 103; Significance: 2e-51; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 84648 - 84473
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||       ||||||| |||||||||  |||||||||||||||||||||||| ||||    
T  84648 ttgttttaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaatttttctctcgcacaattttcaatgcaactttaagtttgtc 84549  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    | ||||| ||||||||||| || ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  84548 tttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatttcattcaattccttaatctgtg 84473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 24041155 - 24040983
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnn-cttccaacttttctctcaaacaattttcaatgcaactttaagtgtgt 162  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||        |||||||||||||||||| |||||||||||||||||||||||| |||    
T  24041155 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttctctcacacaattttcaatgcaactttaagtttgt 24041056  T
Q  163 ctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatc 235  Q
    || ||||| ||||||||||| |||||||||||||||| |||| ||||||||||||| |||| |||||||||||    
T  24041055 ctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatc 24040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 239
Target Start/End: Complemental strand, 1430666 - 1430491
Alignment:
Q  65 tgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    |||||||||||||||||||||||||||||| |||||| ||||||       ||||||||||||||| || ||||||| |||||||||||||||| |||||    
T  1430666 tgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaacttttctcacacacaatttccaatgcaactttaagtttgtct 1430567  T
Q  165 gtttctaataaagtaaggt-cagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
     ||||| ||||||||| || |||||||||||||||| |||  ||||| ||||||| ||| |||| |||||||||||    
T  1430566 ttttcttataaagtaaagtgcagtttagtaaaagtgttatatctaattattatttcattaaatttcttaatctgtg 1430491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 30006206 - 30006327
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||||||||||||||||||||||||||||||||||||| | | ||| ||||| ||||||||||  || |||||||| |||| |||| ||||||||||||    
T  30006206 tccaacttttctctcaaacaattttcaatgcaactttaaatttatctttttcttataaagtaagagcaatttagtaatagtgttatgtctaatgattatt 30006305  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | ||||||||| ||||||||||    
T  30006306 tcattcaattcattaatctgtg 30006327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 239
Target Start/End: Original strand, 49894807 - 49894979
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgt 166  Q
    ||||||||||||||| | ||||||||||||||||| ||||||       |||| ||||||||||||| ||||||||||||| |||||||||| |||||      
T  49894807 tttcaaaatgaatgttattttacatttccaatacaactttaatttttttcttctaacttttctctcacacaattttcaatgtaactttaagtttgtctta 49894906  T
Q  167 ttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    |||| |||||||||||| | |||||||||| || |||| |   ||| ||||| |||| |||||||||||||||    
T  49894907 ttcttataaagtaaggttattttagtaaaattgttatgacatttgactattttattccattccttaatctgtg 49894979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 195
Target Start/End: Complemental strand, 38132322 - 38132189
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttc--tctcaaacaattttcaatgcaactttaagtgtg 161  Q
    |||||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||  ||||| |||||||||||||||||||||||| ||    
T  38132322 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacttttctttctcacacaattttcaatgcaactttaagtatg 38132223  T
Q  162 tctgtttctaataaagtaaggtcagtttagtaaa 195  Q
    |||  |||  |||||||||||| | |||||||||    
T  38132222 tcttgttcctataaagtaaggttattttagtaaa 38132189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 28751481 - 28751363
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||||||  ||||||||||||| |||||||||| ||||  ||||| ||||||||||| ||||||||||||| || |||| ||||||||||||| |    
T  28751481 aacttttctctcgcacaattttcaatgtaactttaagtttgtccttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattatttta 28751382  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||  |||||||||||||||    
T  28751381 tttcattccttaatctgtg 28751363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 48259936 - 48259818
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||| ||| |||||||||||||||||||||||| | ||| ||||| |||||| |||| ||||||| |||||||| |||| |||| |||||||| |    
T  48259936 aacttttctttcacacaattttcaatgcaactttaagtttatctttttcttataaagcaagggcagtttaataaaagtgttatgtctaacgattatttca 48259837  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||| |||||||||||||||    
T  48259836 ttctattccttaatctgtg 48259818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 50349936 - 50349812
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataa------agtaaggtcagtttagtaaaagtggtatggctaatgatt 214  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||      ||||||| |||||||||||||||| |||| |||||||||    
T  50349936 aacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataattataaagtaagggcagtttagtaaaagtgttatgtctaatgatt 50349837  T
Q  215 atttgattcaattccttaatctgtg 239  Q
    |||| |||| |||||||||| ||||    
T  50349836 atttcattccattccttaatttgtg 50349812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 118 - 238
Target Start/End: Original strand, 11650134 - 11650254
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||| |||||||||| ||||||| |||||||||||||||| ||||| |||||  |||||||||| ||||||||||||| |  |||  |||||| |||||    
T  11650134 tccaatttttctctcacacaatttccaatgcaactttaagtttgtctttttcttttaaagtaagggcagtttagtaaaaatactatatctaatggttatt 11650233  T
Q  218 tgattcaattccttaatctgt 238  Q
    | |||||||| ||||||||||    
T  11650234 tcattcaatttcttaatctgt 11650254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 37437474 - 37437358
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagt-aaaagtggtatggctaatgattatttgatt 222  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| || |||||| ||||||| |||| ||||||| ||||| |||    
T  37437474 ttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaaagtgttatgtctaatgaatatttcatt 37437375  T
Q  223 caattccttaatctgtg 239  Q
      |||||||||| ||||    
T  37437374 tcattccttaatatgtg 37437358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 10691074 - 10690910
Alignment:
Q  75 tgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaata 174  Q
    ||||||||||||||||||| ||||||| || |||       ||| |||||||| ||||| |||||||||||||||||||||||| ||||| ||||| |      
T  10691074 tgaatgtcactttacattttcaatacaactataatttttttctttcaacttttatctcacacaattttcaatgcaactttaagtttgtctttttcttacg 10690975  T
Q  175 aagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    |||||||  ||||||||||||| || |||  ||||||||||||| |||  ||| |||||| ||||    
T  10690974 aagtaagtgcagtttagtaaaaatgttatatctaatgattatttcatttcatttcttaatatgtg 10690910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 43105676 - 43105562
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    ||||||||||||||  ||||||||||||||| ||||||| ||||| ||||| ||||| ||| |  | ||||||||||||| |||| |||||||||||||     
T  43105676 caacttttctctcacgcaattttcaatgcaattttaagtttgtctttttcttataaaataatggtaatttagtaaaagtgttatgtctaatgattatttc 43105577  T
Q  220 attcaattccttaat 234  Q
    |||||||| ||||||    
T  43105576 attcaatttcttaat 43105562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 43755054 - 43755185
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgt 166  Q
    |||||||||||| |||||||||||||| ||||||| ||||||       |||||||||||||||||| |||||||||||  ||||||||||| ||||| |    
T  43755054 tttcaaaatgaacgtcactttacattttcaatacaactttaatttttt-cttccaacttttctctcacacaattttcaaaacaactttaagtttgtcttt 43755152  T
Q  167 ttctaataaagtaaggtcagtttagtaaaagtg 199  Q
    |||| || |||||||| |  |||||||||||||    
T  43755153 ttcttattaagtaagggcgatttagtaaaagtg 43755185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 236
Target Start/End: Complemental strand, 5317651 - 5317535
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaa-ggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||| ||||| ||||| ||| || || ||||||||||||| |||| |||||||||||||    
T  5317651 caacttttctctcca-caattttcaatgcaactttaagtttgtctttttcttataaaataaggggcaatttagtaaaagtgttatgtctaatgattattt 5317553  T
Q  219 gattcaattccttaatct 236  Q
     |||  ||||||||||||    
T  5317552 catttcattccttaatct 5317535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 6332243 - 6332364
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| ||||||||||||| ||||||| || ||||| ||||  |||||  || | |||||||||||||||| |||| ||||||||||||    
T  6332243 tccaacttttttctcacacaattttcaatgtaactttatgtttgtctttttcatataaaacaaaggcagtttagtaaaagtgttatgtctaatgattatt 6332342  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||||||| |||||| ||||    
T  6332343 tcattcaatttcttaatttgtg 6332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 12002322 - 12002443
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||| ||||  |||||  |||| |||||||||||||||  |||| || |||||||||    
T  12002322 tccaacttttttctcacacaattttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttagtaaaagtattatgtctgatgattatt 12002421  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||| ||||    
T  12002422 tcatttcattccttaatatgtg 12002443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 1428945 - 1429059
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagt-aaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    ||||||||||||| ||||||| |||| ||||||||||| ||||  ||||| ||||||| |||| |||||||||||||||| |||  ||||| |||||||     
T  1428945 aacttttctctcacacaatttccaattcaactttaagtttgtccttttcttataaagtaaagggcagtttagtaaaagtgttatatctaataattatttc 1429044  T
Q  220 attcaattccttaat 234  Q
    |||||||| ||||||    
T  1429045 attcaatttcttaat 1429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 43929764 - 43929881
Alignment:
Q  122 acttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgat 221  Q
    |||||||||||| | ||||||| || |||||||||||  |||| ||||| ||||||||| |  ||| ||||||||||| |||| ||||||||||||| ||    
T  43929764 acttttctctcacataattttcgatacaactttaagttagtctttttcttataaagtaatggaagtatagtaaaagtgttatgtctaatgattatttcat 43929863  T
Q  222 tcaattccttaatctgtg 239  Q
    |||||| |||||| ||||    
T  43929864 tcaatttcttaatttgtg 43929881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 17919893 - 17919777
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||| |||   |||||  |||| |||||||||||||||| ||| | |||||||||||| |    
T  17919893 aacttttttctcacacaattttcaatgcaactttaagtttgtctttttaatataaaacaagggcagtttagtaaaagtgttat-gttaatgattatttca 17919795  T
Q  221 ttcaattccttaatctgt 238  Q
    ||  |||| |||||||||    
T  17919794 tttcattcattaatctgt 17919777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 45749554 - 45749470
Alignment:
Q  139 ttttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattc 223  Q
    ||||||||| || ||||||| ||||| ||||| ||||||||||| | |||||||||||||| |||| ||||||||||||| ||||    
T  45749554 ttttcaatgtaaatttaagtttgtctttttcttataaagtaagggcggtttagtaaaagtgttatgtctaatgattattttattc 45749470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 17806451 - 17806373
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||| ||||| |||||| || || | ||||||||||    
T  17806451 tccaacttttctctcatacaattttcaatgcaattttaagtttgtctttttcttataaaggaaagttattttagtaaaa 17806373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 254989 - 254909
Alignment:
Q  118 tccaacttttctc--tcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||  ||| |||||||||||||||||||||||| ||||| ||||| |||||||| ||| | ||||||||||    
T  254989 tccaacttttctcactcacacaattttcaatgcaactttaagtttgtctttttcttataaagtagggttattttagtaaaa 254909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 40060982 - 40060861
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||| | | |||||||||||||||| |||   | ||| ||||| ||||||||||| || ||||||||||||| |||| ||||| ||||||    
T  40060982 tccaacttttctcttacaaaattttcaatgcaactataaaattatctttttcttataaagtaagggcaatttagtaaaagtgttatgtctaatcattatt 40060883  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  ||| |||||| ||||    
T  40060882 tcatttcatttcttaatatgtg 40060861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 52403555 - 52403672
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||| ||||||| | |||||||| ||||||||||| | ||||| || || ||||||||||| ||||||| ||| |||| |||  | ||||||||||| |    
T  52403555 aacttctctctcacataattttcagtgcaactttaattttgtcttttccttataaagtaagggcagtttaataacagtgttatatccaatgattatttca 52403654  T
Q  221 ttcaattccttaatctgt 238  Q
    ||| ||| ||||||||||    
T  52403655 ttccatttcttaatctgt 52403672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 26252202 - 26252274
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||| |||||||||||||||||||||||| |||||  |||| ||||| |||||| | ||||||||||    
T  26252202 ttttctctcacacaattttcaatgcaactttaagtttgtcttgttcttataaaataaggttattttagtaaaa 26252274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 42650319 - 42650247
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||| |||||||||||||||| ||||||| ||||| ||||| ||||| |||||| | ||||||||||    
T  42650319 ttttctctcacacaattttcaatgcaattttaagtttgtctttttcttataaactaaggttattttagtaaaa 42650247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 48260008 - 48259964
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  48260008 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 48259964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 672354 - 672280
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||| ||||| || ||||||||| | ||||||||||    
T  672354 aacttttctctcacacaattttcaatgcaaatttaagtttgtctttttcttat-aagtaaggttattttagtaaaa 672280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 44583851 - 44583968
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||| ||| | | ||||||||||||| |||||| ||||| ||||| ||||| ||||| |||||||| |||| || |||| ||||||||||||| |    
T  44583851 aacttttctttcacatagttttcaatgcaacattaagtttgtctttttcttataaaataagg-cagtttaggaaaattgttatgtctaatgattatttta 44583949  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||  ||| |||||| ||||    
T  44583950 tttcatttcttaatttgtg 44583968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 2245881 - 2245982
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
    ||||||||||||||| |||||||| ||||| ||||| |||||| || | ||||||||||||| |  ||||  ||||||||| || |||| ||| ||||||    
T  2245881 acaattttcaatgcatctttaagtttgtctttttcttataaaggaatgacagtttagtaaaaatattatgtttaatgattacttcattccatttcttaat 2245980  T
Q  235 ct 236  Q
    ||    
T  2245981 ct 2245982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 22664937 - 22664974
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22664937 ttgtttcaaaatgaatgtcactttacatttccaataca 22664974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 26252116 - 26252153
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26252116 ttgtttcaaaatgaatgtcactttacatttccaataca 26252153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 44582856 - 44582776
Alignment:
Q  118 tccaacttttct--ctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||  |||| | |||||||||||||||||||||| ||||| ||||| |||||||||| | | ||||||||||    
T  44582856 tccaacttttctatctcacataattttcaatgcaactttaagtttgtctttttcttataaagtaagattattttagtaaaa 44582776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 2459087 - 2459160
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||  ||||||||||| ||||||||||| ||| | ||||| |||||||||||| | ||||||||||    
T  2459087 aacttttctctca--caattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaa 2459160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 11650056 - 11650100
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  11650056 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 11650100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 12851739 - 12851783
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  12851739 ttgtttcaaaatgaatgtcactttacatttccaatagaactttaa 12851783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 45377301 - 45377261
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagcttta 107  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  45377301 tttcaaaatgaatgtcactttacatttccaatacaacttta 45377261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 9552484 - 9552353
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaactttt--ctctcaaacaattttcaatgcaactttaagtgtg 161  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||         || |||||||  |||||| | |||||||||||||||||||||  ||    
T  9552484 ttgttttaaaatgaatgtcattttacatttccaatacaactttaattttac---tcaaacttttttctctcacataattttcaatgcaactttaagattg 9552388  T
Q  162 tctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||  |||| |||||||||| | | ||||||||||    
T  9552387 tcttgttcttataaagtaagtttattttagtaaaa 9552353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 15698824 - 15698705
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagta-aggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    ||||||||||||| | ||||||||||  |||||||||| | ||| ||||| |||||||| | |  |||||| | |||||| |||| |||||||||||||     
T  15698824 aacttttctctcacataattttcaatagaactttaagtttatctttttcttataaagtacatggtagtttatttaaagtgttatgtctaatgattattta 15698725  T
Q  220 attcaattccttaatctgtg 239  Q
    |||  |||||||||| ||||    
T  15698724 attttattccttaatttgtg 15698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 22665015 - 22665091
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||| |||||||  ||||||| ||| ||||||||||| |||||  |||| |||||||||||| ||||||||||||    
T  22665015 tccaacttctctctca--caatttttaattcaactttaagtttgtcttgttcttataaagtaaggttagtttagtaaaa 22665091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 15698951 - 15698835
Alignment:
Q  18 tactcccttcgtttcaaaatgaatgtcactttagcnnnnnnnnnnnttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnnct 117  Q
    |||||| | ||||||||||||| ||||||||||||           |||||| |||||||||||||||||| |||||||||||| ||||||       ||    
T  15698951 tactccatccgtttcaaaatgagtgtcactttagcaaaaaaaaaaattgttttaaaatgaatgtcactttatatttccaatacaactttaattttcttct 15698852  T
Q  118 tccaacttttctctcaa 134  Q
    ||||||||| |||||||    
T  15698851 tccaactttactctcaa 15698835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 50591446 - 50591316
Alignment:
Q  69 tcaaaatgaatgtcactttacatttccaatacagctttaannnnnnn-cttccaacttttctct--caaacaattttcaatgcaactttaagtgtgtctg 165  Q
    ||||||||||||||  |||||||| |||||||| ||||||        ||||||||||||||||  || |||||||||||||||| ||||||| |||||     
T  50591446 tcaaaatgaatgtcgttttacattaccaatacaactttaattttttttcttccaacttttctctatcacacaattttcaatgcaattttaagtttgtctt 50591347  T
Q  166 tttctaataaagtaaggtcagtttagtaaaa 196  Q
     |||  ||||| |||||| | ||||||||||    
T  50591346 gttcctataaaataaggttattttagtaaaa 50591316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 5854302 - 5854222
Alignment:
Q  118 tccaacttttc--tctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||  ||||| ||||||||||||||||| |||||  ||||| ||||| ||||||||| || | ||||||||||    
T  5854302 tccaacttttcgatctcacacaattttcaatgcaaccttaaggttgtctttttcttataaagtaaagttattttagtaaaa 5854222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 15647215 - 15647178
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||||||||||||||||||||||||||| |||||||    
T  15647215 ttgtttcaaaatgaatgtcactttacattttcaataca 15647178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 17919971 - 17919930
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  17919971 tttcaaaatgaatatcactttacatttccaatacaactttaa 17919930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 28200281 - 28200220
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||| ||||||||||| ||| | ||||| |||||||||||| | ||||||||||    
T  28200281 acaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaa 28200220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 40061048 - 40061007
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  40061048 tttcaaaatgaatgtcactttacattttcaatacaactttaa 40061007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 44582931 - 44582890
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  44582931 tttcaaaataaatgtcactttacatttccaatacaactttaa 44582890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 50158458 - 50158417
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  50158458 tttcaaaatgaatgtcactttacattttcaatacaactttaa 50158417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 255068 - 255024
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||    
T  255068 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaa 255024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 5317731 - 5317687
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||| || ||||||| ||||||    
T  5317731 ttgtttcaaaatgaatgtcactttacaatttcaatacaactttaa 5317687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 12002244 - 12002288
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||    
T  12002244 ttgttttaaaatgaatgtcattttacatttccaatacaactttaa 12002288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 48320076 - 48319981
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgatt 214  Q
    ||||| || ||||||| ||||||| | |||||||||||||| ||||| | | | ||||||||||| || ||||||||||||  |||| |||||||||    
T  48320076 tccaatttatctctcacacaattt-cgatgcaactttaagtttgtctttcttttataaagtaagggcaatttagtaaaagtcttatgtctaatgatt 48319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 11134614 - 11134571
Alignment:
Q  65 tgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||| |||| || ||||||    
T  11134614 tgtttcaaaatgaatgtcactttacattttcaatgcaactttaa 11134571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 50350012 - 50349966
Alignment:
Q  64 ttgtttcaaaatgaat--gtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||    
T  50350012 ttgtttcaaaatgaatatgtcactttacatttccaatacaactttaa 50349966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 26582923 - 26582994
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaa 135  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||||||       |||| |||||||||||||||    
T  26582923 ttgttttaaaataaatgttactttacatttccaatacaactttaatttttttcttcgaacttttctctcaaa 26582994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 45377226 - 45377180
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    |||||||||||||||  ||||||||||||| |||||||||| |||||    
T  45377226 tccaacttttctctcgcacaattttcaatgaaactttaagtttgtct 45377180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 1428865 - 1428901
Alignment:
Q  65 tgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  1428865 tgttttaaaatgaatgtcactttacatttctaataca 1428901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 2459006 - 2459050
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||    
T  2459006 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 2459050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 17806529 - 17806485
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||| |||| |||||||||||||||||| ||||||    
T  17806529 ttgttttaaaatgagtgtcgctttacatttccaatacaactttaa 17806485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 42121619 - 42121740
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  42121619 tccaacttttctctcaaacaattttcaatgcaactttaagtgtatctttttctaataaagtaaggtcagtttagtaaaagtgatatgtctaatgattatt 42121718  T
Q  218 tgattcaattccttaatctgtg 239  Q
    |||||  |||||||||||||||    
T  42121719 tgatttcattccttaatctgtg 42121740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 18886668 - 18886843
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||       |||||||||||||| ||| |||||||||||||||||||||| | ||||    
T  18886668 ttgttttaaaatgaatctcactttacattttcaatacaactttaatttttttcttccaacttttctttcacacaattttcaatgcaactttaattttgtc 18886767  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    | || || ||||||||||| |||||||||||||| | |||  ||||||||||||| |||| ||| |||| ||||||    
T  18886768 ttttccttataaagtaagggcagtttagtaaaagcgttatatctaatgattatttcattccatttcttagtctgtg 18886843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 239
Target Start/End: Original strand, 17869319 - 17869435
Alignment:
Q  123 cttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgatt 222  Q
    ||||||||||| |||||||||||||||||||||||| ||| | ||||| ||||||||| | || |||| |||||||| |||| ||||||||||||| |||    
T  17869319 cttttctctcacacaattttcaatgcaactttaagtttgtatttttcttataaagtaaagacaatttaataaaagtgttatgtctaatgattatttcatt 17869418  T
Q  223 caattccttaatctgtg 239  Q
      |||||||||||||||    
T  17869419 tcattccttaatctgtg 17869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 33056361 - 33056242
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct-aataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    |||||||||||||||| |||||||||||||||  ||||| | ||||| ||||| |||||||||||| |||||||||||||||| ||||  ||||||||||    
T  33056361 tccaacttttctctcacacaattttcaatgcagttttaaatttgtctttttcttaataaagtaagggcagtttagtaaaagtgttatgtttaatgattat 33056262  T
Q  217 ttgattcaattccttaatct 236  Q
    || |||  ||||||||||||    
T  33056261 ttcatttcattccttaatct 33056242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 34733388 - 34733486
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||| ||||||||||  ||||||||||||||||||||||| ||||| ||||| |||||||||||  ||||||||||||||| |||| ||||||||||||    
T  34733388 tccaatttttctctca--caattttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatt 34733485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 216
Target Start/End: Complemental strand, 42010653 - 42010553
Alignment:
Q  116 cttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgatta 215  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||| ||||| ||||| ||||||||||||| |  |||| ||||||||||    
T  42010653 cttccaacttttctctcatacaattttcaatgtaactttaagtttgtctttttcttataaaataagggcagtttagtaaaaatattatgtctaatgatta 42010554  T
Q  216 t 216  Q
    |    
T  42010553 t 42010553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 3680996 - 3680878
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||||||| | |||||| ||||||||||||| | ||||| ||||| ||||||||||  |||||||||||||||  |||| ||||||||||||| |    
T  3680996 aacttttctctcacagaattttaaatgcaactttaaatttgtctttttcttataaagtaagagcagtttagtaaaagttttatgtctaatgattatttca 3680897  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||| |||  ||||||||||    
T  3680896 ttccattttttaatctgtg 3680878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 22627430 - 22627313
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||  || | ||||||||| | |||||||||||| ||| ||||  ||| |||||||    
T  22627430 tccaacttttctctcacacaattttcaatgcaactttaagtttgtcttatttttataaagtaaaggcagtttagtaaatgtgttatgtttaacgattatt 22627331  T
Q  218 tgattcaattccttaatc 235  Q
    | |||  |||||||||||    
T  22627330 tcatttcattccttaatc 22627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 41906011 - 41905890
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||| | |||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||||||||||| | |||  | ||||||||||    
T  41906011 tccaacttttctcttacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgattatt 41905912  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | | |  ||| |||||||||||    
T  41905911 tcagttcatttcttaatctgtg 41905890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42121488 - 42121593
Alignment:
Q  1 tttttctaattacattatactcccttcgtttcaaaatgaatgtcactttagcnnnnnnnnnnnttgtttcaaaatgaatgtcactttacatttccaatac 100  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||           ||||||||||||||||||||||||| |||||||||||    
T  42121488 tttttctaattacattatactccctccgttttaaaatgaatgtcactttagc--aaaaaaaaattgtttcaaaatgaatgtcactttatatttccaatac 42121585  T
Q  101 agctttaa 108  Q
    | ||||||    
T  42121586 aactttaa 42121593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 48838758 - 48838635
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttcta-----ataaagtaaggtcagtttagtaaaagtggtatggctaatgatta 215  Q
    ||||||||||||| |||||||||||||||||||||| | ||||| ||| ||     |||||||||||||||||||||| || || |||| ||||||||||    
T  48838758 aacttttctctcacacaattttcaatgcaactttaaatttgtctttttttatttttataaagtaaggtcagtttagtataaatgttatgtctaatgatta 48838659  T
Q  216 tttgattcaattccttaatctgtg 239  Q
    ||| |||  |||||||||| ||||    
T  48838658 tttcattttattccttaatttgtg 48838635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 34002209 - 34002087
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggt-cagtttagtaaaagtggtatggctaatgattat 216  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| ||||| ||||||||| || |||||||| ||| ||| |||  | |||||||||    
T  34002209 tccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaagtgcagtttagcaaaggtgttatatccaatgattat 34002110  T
Q  217 ttgattcaattccttaatctgtg 239  Q
    || |||  ||| |||||||||||    
T  34002109 ttcatttcatttcttaatctgtg 34002087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 42259622 - 42259527
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    ||||||| ||||| | |||||||||||||||||||||  ||||| ||||| ||||||||||| || ||||||||||||| |||| ||||| |||||    
T  42259622 aacttttgtctcacataattttcaatgcaactttaagcttgtctttttcttataaagtaagggcattttagtaaaagtgttatgtctaataattat 42259527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 19906490 - 19906608
Alignment:
Q  117 ttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||  |||  |||||||||||| | |||||||||| || |||| |   ||| |||    
T  19906490 ttccaacttttctctctcacaattttcaatgcaactttaagtttgtcttgttcctataaagtaaggttattttagtaaaattgctatgacatttgactat 19906589  T
Q  217 ttgattcaattccttaatc 235  Q
    || |||| |||||||||||    
T  19906590 tttattccattccttaatc 19906608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 28044217 - 28044139
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||| |||||||||| |||||||||||| ||||||||| | ||||| ||||| ||||||||||| |||||||||||||    
T  28044217 tccaatttttctctcacacaattttcaatacaactttaattttgtctttttcttataaagtaagggcagtttagtaaaa 28044139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 10684896 - 10684827
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||| ||||||||||| ||||| ||||| |||||||||||| | ||||||||||    
T  10684896 tctctcacacaattttcaattcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaa 10684827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 26963567 - 26963636
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| | |||||||||||||||||||||| ||||| ||||| |||||||||||| | ||||||||||    
T  26963567 tctctcacataattttcaatgcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaa 26963636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 39117555 - 39117486
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  39117555 tctctcacacaattttcaatgcaactttaagtttgtcttattcttataaagtaaggttattttagtaaaa 39117486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 32345901 - 32345789
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaat 226  Q
    ||||||| |||||||||||| ||||||||||| ||| | ||||| |||||||||||| | |||||||||| || |||| |   ||| || || |||||||    
T  32345901 tctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaat 32345802  T
Q  227 tccttaatctgtg 239  Q
    | |||||||||||    
T  32345801 ttcttaatctgtg 32345789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 40207449 - 40207385
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtg 199  Q
    |||||||||||||||| ||||||| ||||  ||||| ||||||||||| ||||||||||||||||    
T  40207449 acaattttcaatgcaattttaagtttgtcattttcttataaagtaagggcagtttagtaaaagtg 40207385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 238
Target Start/End: Original strand, 1103563 - 1103681
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||||||||||| ||||||||||||| |||||||| | ||| | ||| | |||||||||||  |||||||||||| || | || ||  |||||||||     
T  1103563 caacttttctctcacacaattttcaatgtaactttaaatttgttttttttttataaagtaagggtagtttagtaaaaatgttttgtctggtgattatttc 1103662  T
Q  220 attcaattccttaatctgt 238  Q
    |||  ||| ||||||||||    
T  1103663 attttatttcttaatctgt 1103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 26527473 - 26527356
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||| | ||| |||||||||||||||||||| | | | | ||||| |||||||||   |||||||||||| ||| |||| ||||||||||||    
T  26527473 tccaacttttctgttaaataattttcaatgcaactttaaattttttt-tttcttataaagtaaaagcagtttagtaaaggtgttatgtctaatgattatt 26527375  T
Q  218 tgattcaattccttaatct 236  Q
      |||| ||| ||||||||    
T  26527374 gcattccatttcttaatct 26527356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 238
Target Start/End: Complemental strand, 36447688 - 36447567
Alignment:
Q  117 ttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    ||||||||||||||||| | |||||||||| ||||||||| | | ||| ||||| ||||||||| | ||||||| |||||| | |||  | | | |||||    
T  36447688 ttccaacttttctctcacataattttcaattcaactttaattttatctttttcttataaagtaaagacagtttaataaaagagttatatccagtaattat 36447589  T
Q  217 ttgattcaattccttaatctgt 238  Q
    || |||| ||| ||||||||||    
T  36447588 ttcattccatttcttaatctgt 36447567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 1103483 - 1103527
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  1103483 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaa 1103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 18733452 - 18733496
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  18733452 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 18733496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 22597229 - 22597273
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  22597229 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 22597273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 30514972 - 30515016
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  30514972 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaa 30515016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 40298846 - 40298890
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  40298846 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 40298890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 40298924 - 40298976
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||| |||||    
T  40298924 tccaacttttctctcacacaattttcaatgtaactttaagtttgtctttttct 40298976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 5723082 - 5723125
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  5723082 aacttttctctcacacaattttcaatgcaactttaagtttgtct 5723125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 32275275 - 32275350
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||  ||| |||||||||||||||||||||||| ||  | ||||| ||||||||| | |||||||||||||    
T  32275275 aacttttccttcacacaattttcaatgcaactttaagtttgattttttcttataaagtaaaggcagtttagtaaaa 32275350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 6521905 - 6521971
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagta 193  Q
    ||||||| |||||||||||| ||| ||||||| ||||| ||||| |||||||||||| | |||||||    
T  6521905 tctctcacacaattttcaatacaattttaagtttgtctttttcttataaagtaaggttattttagta 6521971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 19906413 - 19906455
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagcttt 106  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  19906413 ttgtttcaaaatgaatgtcgctttacatttccaatacaacttt 19906455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 22627495 - 22627457
Alignment:
Q  70 caaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  22627495 caaaatgaatgtcactttacatttccaatacaactttaa 22627457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 19288499 - 19288458
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||| |||||| ||||||    
T  19288499 tttcaaaatgaatgtcactttacatttctaatacaactttaa 19288458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 19920419 - 19920382
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  19920419 aaaatgaatgtcactttacatttccaatacaactttaa 19920382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 36447136 - 36447067
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||  |||||  |||| ||||||||| || | ||||||||||    
T  36447136 tctctcacacaattttcaatgcaactttaagcttgtcttattcttataaagtaatgttattttagtaaaa 36447067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 3681077 - 3681033
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  3681077 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 3681033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 5723006 - 5723046
Alignment:
Q  68 ttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  5723006 ttcaaaatgaatgtcactttacattttcaatacaactttaa 5723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 17869236 - 17869280
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| |||||||||||||| || ||||||    
T  17869236 ttgtttcaaaatgaatgtcattttacatttccaatgcaactttaa 17869280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 28044286 - 28044242
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  28044286 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 28044242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 32275203 - 32275247
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||    
T  32275203 ttgtttcaaaatgaatgccactttacatttctaatacaactttaa 32275247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 33845486 - 33845434
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||| ||||  |||||||||||||||||||||||| ||||| |||||    
T  33845486 tccaacttttttctcgcacaattttcaatgcaactttaagtttgtctttttct 33845434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 36836058 - 36836102
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||    
T  36836058 ttgtttcaaaatgaatgtcgctttacattttcaatacaactttaa 36836102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 43813499 - 43813455
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||    
T  43813499 ttgttttaaaatgaatgtcactttatatttccaatacaactttaa 43813455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 47272230 - 47272349
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    ||||||||  |||| |||||||||||||||| |||| || ||||| ||||  |||||  |||| ||||||||||||| || ||||  ||||| |||||      
T  47272230 caactttttcctcacacaattttcaatgcaattttatgtttgtctttttcatataaaacaagggcagtttagtaaaattgttatgtttaatggttattcc 47272329  T
Q  220 attcaattccttaatctgtg 239  Q
    |||  |||| ||||||||||    
T  47272330 atttcattctttaatctgtg 47272349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 19277110 - 19277056
Alignment:
Q  129 tctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggt 183  Q
    ||||| |||||||||||||||||||||||| |||||  |||  ||||||||||||    
T  19277110 tctcacacaattttcaatgcaactttaagtttgtcttgttcatataaagtaaggt 19277056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 31416817 - 31416748
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||| | |||||  |||| ||||| |||| | | ||||||||||    
T  31416817 tctctcacacaattttcaatgcaactttaaatttgtcttgttcttataaaataagattattttagtaaaa 31416748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 32873318 - 32873281
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  32873318 ttgttttaaaatgaatgtcactttatatttccaataca 32873281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 36447225 - 36447188
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  36447225 ttgtttcaaaatgaatgtcattttacattttcaataca 36447188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 42044131 - 42044090
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||    
T  42044131 tttcaaaattaatgtcactttacattttcaatacaactttaa 42044090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 42753706 - 42753743
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaataca 42753743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 30833170 - 30833051
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| |||||||||| || |||| ||||| ||||| ||||  |||||  |||  || ||||||||||||| |||  ||||| ||||||    
T  30833170 tccaacttttttctcacacaattttcagtgtaactctaagtttgtctttttcatataaaacaaga-caatttagtaaaagtgttatatctaataattatt 30833072  T
Q  218 tgattcaattccttaatctgt 238  Q
    | |||| |||| | |||||||    
T  30833071 tcattctattcttaaatctgt 30833051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 31416906 - 31416862
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||    
T  31416906 ttgttttaaaatgaatatcactttacattttcaatacaactttaa 31416862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 32345990 - 32345946
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||    
T  32345990 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 32345946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 41906088 - 41906044
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||    
T  41906088 ttgttttaaaataaatgtcactttacatttctaatacaactttaa 41906044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 32141119 - 32140944
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||       |||||||||||||||||| |||||||||||||||| |||| || ||||    
T  32141119 ttgtttcaaaatgaatgccactttacatttccaatacaactttaatttttttcttccaacttttctctcacacaattttcaatgcaaatttatgtttgtc 32141020  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    | ||  | |||||||| || |||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||    
T  32141019 ttttgtttataaagtaggggcagtttagtaaaagtgttatgtctaatgattatttcattcaatttcttaatctgtg 32140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 21045151 - 21045327
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnn-cttccaacttttctctcaaacaattttcaatgcaactttaagtgtgt 162  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||        |||||||||||||||||| |||||||||||||||||||||| | |||    
T  21045151 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttctctcacacaattttcaatgcaactttaattttgt 21045250  T
Q  163 ctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    || ||||| ||||||||||| ||||||| ||||||   |||  | ||||||||||| |||| |||||||||||||||    
T  21045251 ctttttcttataaagtaagggcagtttaataaaagccttatatccaatgattatttcattccattccttaatctgtg 21045327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 34360078 - 34360197
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||| |||  ||||||||||||    
T  34360078 tccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatatctaatgattatt 34360177  T
Q  218 tgattcaattccttaatctg 237  Q
    | |||  |||||||||||||    
T  34360178 tcatttcattccttaatctg 34360197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 51930595 - 51930728
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||       |||||||||||||||||| |||||||||||||||||||||| | ||||    
T  51930595 ttgtttcaaaatgaatgtcgctttacatttccaatacaattttaatttttttcttccaacttttctctcacacaattttcaatgcaactttaattttgtc 51930694  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaag 197  Q
      ||||| ||||||||||| ||||||||||||||    
T  51930695 attttcttataaagtaagggcagtttagtaaaag 51930728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 235
Target Start/End: Complemental strand, 39671238 - 39671068
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||       ||| |||||||||||||| |||||||||||||||||||||||| |||     
T  39671238 ttgtttcaaaatgaatgtcgttttacatttccaatacaactttaatttttt-ctttcaacttttctctcacacaattttcaatgcaactttaagtttgtt 39671140  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatc 235  Q
    | ||||| ||||||||| |  ||||||||||| ||| |||| |||||||| |||| |||| ||| |||||||    
T  39671139 tttttcttataaagtaaaggtagtttagtaaatgtgttatgtctaatgataatttcattccatttcttaatc 39671068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 56556410 - 56556237
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnn-cttccaacttttctctcaaacaattttcaatgcaactttaagtgtgt 162  Q
    |||||||||||||||||||||||||||||||||||||| ||||||        |||||||||||||||||| ||||||||||||| ||  |||||| |||    
T  56556410 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaacttttctctcacacaattttcaatgtaatgttaagtttgt 56556311  T
Q  163 ctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
     | ||||| |||||| ||||  | ||||||||||||| |||| ||||||   |||| ||||||||||||||||||||    
T  56556310 atttttcttataaagcaaggataatttagtaaaagtgttatgtctaatg---atttcattcaattccttaatctgtg 56556237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 36805529 - 36805408
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| |||||||||||| ||||||||||| ||||| ||||  ||||| ||||| |||||||||||||||| |||| ||||||||||||    
T  36805529 tccaacttttttctcacacaattttcaatacaactttaagtttgtctttttcatataaactaaggacagtttagtaaaagtgttatgtctaatgattatt 36805430  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||||||||    
T  36805429 tcatttcattccttaatctgtg 36805408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 45520534 - 45520419
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||  |||| |||| |||||| ||| |||||||||||| |||| ||||||||||||| |    
T  45520534 aacttttctctcatacaatttttaatgcaactttaagtttgtcttattcttataatgtaagggcagcttagtaaaagtgttatgtctaatgattatttta 45520435  T
Q  221 ttcaattccttaatct 236  Q
    ||| ||| ||||||||    
T  45520434 ttccatttcttaatct 45520419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 15501231 - 15501133
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    |||||||||||||| |||||||| ||||||||||||||| ||| | ||||| ||||||||||| ||||||||||||| || |||| |||||||||||||    
T  15501231 caacttttctctcacacaatttttaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattattt 15501133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 34096092 - 34096189
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||| ||||| ||||||||||| || ||||||||||||| || | |||||||||||||    
T  34096092 aacttttctctcacacaattttcaatgaaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaagtgttaagtctaatgattattt 34096189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 52732665 - 52732782
Alignment:
Q  119 ccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||| || || ||||||||||| |||||||||||||||| |||  | |||||||||||    
T  52732665 ccaacttttctctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtgttatatccaatgattattt 52732764  T
Q  219 gattcaattccttaatct 236  Q
     |||| |||  |||||||    
T  52732765 cattccattttttaatct 52732782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 31817331 - 31817157
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgt- 162  Q
    ||||||||||||||||||||||||||||||||||| || ||||         |||||||||||||||||| |||||||||||||||||||||| | |||     
T  31817331 ttgtttcaaaatgaatgtcactttacatttccaatgcaacttt--tttttttcttccaacttttctctcacacaattttcaatgcaactttaattttgta 31817234  T
Q  163 ctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
     | ||||| |||||||||||  ||||||||||||  | |||  | ||||||||||| |||| ||| |||||| ||||    
T  31817233 ttttttcttataaagtaagggaagtttagtaaaaacgttatatccaatgattatttcattccatttcttaatttgtg 31817157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 50072276 - 50072402
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||       |||||||||||| ||||| |||||||||||||||||||||| | ||      
T  50072276 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacttttttctcacacaattttcaatgcaactttaattttg-- 50072373  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaa 196  Q
        ||| ||||||||||| |||||||||||||    
T  50072374 ----tcttataaagtaagggcagtttagtaaaa 50072402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 44855317 - 44855438
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| || || ||||||||||| |||||||||||||| | |||    ||||||||||    
T  44855317 tccaacttttctctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatattcaatgattatt 44855416  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||| ||| |||||| ||||    
T  44855417 tcattctatttcttaatttgtg 44855438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 19849157 - 19849235
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| | ||||| ||||||| ||| |||||||||||||    
T  19849157 tccaacttttctctcacacaattttcaatgcaactttaagtttgtttttttcttataaagtgagggcagtttagtaaaa 19849235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 37445739 - 37445833
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    |||||| ||| | |||||| ||||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||| |||| |||||||||||||    
T  37445739 ttttctttcacataatttttaatgcaactttaaatttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattattt 37445833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 30022143 - 30022258
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||||||||||| |||||||||||||||||||| ||| ||||| ||||| ||| |  ||||| ||||||||||||||| |||   ||||||||||||     
T  30022143 caacttttctctcacacaattttcaatgcaactttgagtttgtctttttcttatacaagaaggt-agtttagtaaaagtgttatatataatgattatttt 30022241  T
Q  220 attcaattccttaatct 236  Q
    |||  ||||||||||||    
T  30022242 atttcattccttaatct 30022258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 47321237 - 47321341
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
    |||||||||||||||||||||||  ||||| ||||| |||||||||||| | |||||||||| || |||| |   ||| ||||| |||||||||||||||    
T  47321237 acaattttcaatgcaactttaaggttgtctttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaattccttaat 47321336  T
Q  235 ctgtg 239  Q
    |||||    
T  47321337 ctgtg 47321341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 42672464 - 42672583
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||| ||||| | |||||||||||| ||||||||| | ||||| ||||| |||||||| |   ||||||||||||||| |||| |||||||||||||     
T  42672464 caacttctctcttacacaattttcaatacaactttaaatttgtctttttcttataaagtatgagtagtttagtaaaagtgttatgtctaatgattatttc 42672563  T
Q  220 attcaattccttaatctgtg 239  Q
    |||  |||||||||| ||||    
T  42672564 attatattccttaatttgtg 42672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 38761903 - 38761788
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||||||||||||||  |||||||||| | |||||||||||||||| | |||||||||||||||    ||||||||||||| |||| ||| | ||||||    
T  38761903 tccaacttttctctca--caattttcaaggtaactttaagtgtgtctttctctaataaagtaagggtgatttagtaaaagtgttatgtctattaattatt 38761806  T
Q  218 tgattcaattccttaatc 235  Q
    | |||| ||| |||||||    
T  38761805 taattctatttcttaatc 38761788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 54233844 - 54233969
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgt 166  Q
    |||||||||||||| | |||||||||| ||||||| ||||||       |||||||||   |||||| |||||||||||||||||||||||| ||||| |    
T  54233844 tttcaaaatgaatgccgctttacattttcaatacaactttaatttttt-cttccaact---ctctcacacaattttcaatgcaactttaagtttgtcttt 54233939  T
Q  167 ttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||| |||||||||| | | ||||||||||    
T  54233940 ttcttataaagtaagcttattttagtaaaa 54233969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 43421197 - 43421082
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattc 223  Q
    |||||||||| ||||| |||||||||||||||| | ||||| ||||| ||||||||||  || ||||||||||||  |||  | ||||||||||| ||||    
T  43421197 ttttctctcacacaatattcaatgcaactttaattttgtctttttcttataaagtaagagcaatttagtaaaagtattatatccaatgattatttcattc 43421098  T
Q  224 aattccttaatctgtg 239  Q
     ||| |||||| ||||    
T  43421097 catttcttaatttgtg 43421082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 54512096 - 54512174
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| ||||| |||||||||||||||| | ||||  ||||| ||||||||||  |||||||||||||    
T  54512096 tccaacttttctctcacacaatgttcaatgcaactttaattttgtcattttcttataaagtaagagcagtttagtaaaa 54512174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 17499785 - 17499716
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||| || | ||||||||||    
T  17499785 tctctcatacaattttcaatgcaactttaagtttgtctttttcttataaagtaatgttattttagtaaaa 17499716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 24259695 - 24259764
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| ||||  ||||| |||||||||||| | ||||||||||    
T  24259695 tctctcacacaattttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaa 24259764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 29840025 - 29840114
Alignment:
Q  17 atactcccttcgtttcaaaatgaatgtcactttagcnnnnnnnnnnnttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||| ||||||||||||| ||||||||||||           |||||||||||||||||||||||||||||||||||||| ||||||    
T  29840025 atactccctccgtttcaaaatgactgtcactttagccaaaaaaaa--ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29840114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 170
Target Start/End: Original strand, 38692409 - 38692515
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||| ||||||||||||||||||||||| ||||  | ||||||       || ||||||||||||||  |||||||||||||||||||||| | ||||    
T  38692409 ttgttttaaaatgaatgtcactttacattttcaattaaactttaatttttttctcccaacttttctctcgcacaattttcaatgcaactttaattttgtc 38692508  T
Q  164 tgtttct 170  Q
    | |||||    
T  38692509 tttttct 38692515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 45889647 - 45889716
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| ||| | ||||| |||||||||||| | ||||||||||    
T  45889647 tctctcacacaattttcaatgcaactttaagtttgtttttttcttataaagtaaggttattttagtaaaa 45889716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 3093424 - 3093539
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||||||||||| ||||||| | |||||||||||| | | | | ||||| |||||| |||| || |||| | |||||| |||| |||||||||||||     
T  3093424 caacttttctctcacacaatttccgatgcaactttaaatttcttt-tttcttataaaggaaggacaatttaatgaaagtgttatgtctaatgattatttt 3093522  T
Q  220 attcaattccttaatct 236  Q
    |||||||| ||||||||    
T  3093523 attcaatttcttaatct 3093539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 19282567 - 19282523
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  19282567 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 19282523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 34124379 - 34124491
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaat 226  Q
    ||||||| |||||||||||| ||||||||||| ||| | ||||| |||||||||||| | |||||||||| || |||| |   ||| || || |||||||    
T  34124379 tctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaat 34124478  T
Q  227 tccttaatctgtg 239  Q
    | |||||||||||    
T  34124479 ttcttaatctgtg 34124491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 4408245 - 4408176
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||| ||||||| ||||| ||||| ||| |||||||| | ||||||||||    
T  4408245 tctctcacacaattttcaatgcaattttaagtttgtctttttcttatatagtaaggttattttagtaaaa 4408176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 6462004 - 6462048
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  6462004 ttgtttcaaaatgaatgtcgctttacatttccaatacaactttaa 6462048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 15501302 - 15501258
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||    
T  15501302 ttgtttgaaaatgaatgtcactttacatttccaatacaactttaa 15501258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 24259606 - 24259650
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  24259606 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaa 24259650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 52732594 - 52732638
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||    
T  52732594 ttgttttaaaatgaatgtcactttacatttccaatacaactttaa 52732638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 11835186 - 11835295
Alignment:
Q  126 ttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagta-aggtcagtttagtaaaagtggtatggctaatgattatttgattca 224  Q
    |||||||| |||||||||||||||||||||||| | ||| ||||| ||||| || |||| |||||| |||||||| |||| ||||| ||||||| |||      
T  11835186 ttctctcacacaattttcaatgcaactttaagtttatct-tttcttataaactataggt-agtttaataaaagtgttatgcctaataattatttcatttc 11835283  T
Q  225 attccttaatct 236  Q
    ||| ||||||||    
T  11835284 atttcttaatct 11835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 56423056 - 56422957
Alignment:
Q  140 tttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    ||||||||||| ||||| |  |||| ||||| ||||||||| | |||||||||||||| | |||  | ||||||||||| |||| ||| |||||||||||    
T  56423056 tttcaatgcaattttaatttcgtctttttcttataaagtaaagacagtttagtaaaagcgttatatccaatgattatttcattcgatttcttaatctgtg 56422957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 51737367 - 51737280
Alignment:
Q  150 actttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    ||||||||| ||||| ||||  |||||||||||  | ||||||||||||| |||| ||||| ||||||| |||| |||||||||| ||||    
T  51737367 actttaagtttgtctttttc--ataaagtaagggtaatttagtaaaagtgttatgtctaattattatttcattctattccttaatttgtg 51737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 28116243 - 28116284
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  28116243 tttcaaaataaatgtcactttacatttccaatacaactttaa 28116284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 31941642 - 31941711
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| | |||||||||||||||||||||| |||||  |||| |||||||||||| | |||| |||||    
T  31941642 tctctcacataattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttaataaaa 31941711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 45903559 - 45903518
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  45903559 tttcaaaatgaatgtcactttacattttcaatacaactttaa 45903518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 51434325 - 51434256
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| ||||||||||||||||||| ||||  |||| ||||| |||||||||||| | |||| |||||    
T  51434325 tctctcacacaattttcaatgcaacttaaagttagtctttttcttataaagtaaggttattttaataaaa 51434256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 1868255 - 1868211
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  1868255 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaa 1868211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 29289968 - 29289924
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||    
T  29289968 caacttttctctcacacaattttcaatgcaattttaagtttgtct 29289924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 29840197 - 29840249
Alignment:
Q  187 tttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    ||||||||||||| |||| ||||||||||||| |||| |||||||||| ||||    
T  29840197 tttagtaaaagtgttatgtctaatgattatttcattccattccttaatttgtg 29840249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 30022063 - 30022107
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||    
T  30022063 ttgtttcaaaatgaatgttacttgacatttccaatacaactttaa 30022107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 31941553 - 31941597
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  31941553 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 31941597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 43421272 - 43421228
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||    
T  43421272 ttgtttcaaaatgaaggtcactttacatttcccatacaactttaa 43421228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 44855237 - 44855281
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||||    
T  44855237 ttgtttcgaaataaatgtcactttacatttccaatacaactttaa 44855281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 47321139 - 47321183
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  47321139 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 47321183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 17317999 - 17317956
Alignment:
Q  65 tgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||    
T  17317999 tgtttcaaactgaatgtcacattacatttccaatacaactttaa 17317956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 30492859 - 30492914
Alignment:
Q  184 cagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    ||||| |||||||||| |||| ||||||||||||| |||| |||||||||| ||||    
T  30492859 cagttcagtaaaagtgttatgtctaatgattatttcattccattccttaatttgtg 30492914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 32140901 - 32140834
Alignment:
Q  172 ataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    ||||||||||   ||||||||||||||| ||||  ||||||||||||||||  |||||||||| ||||    
T  32140901 ataaagtaagaatagtttagtaaaagtgttatgtttaatgattatttgatttcattccttaatttgtg 32140834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 17499874 - 17499840
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaat 98  Q
    ||||||||||||||||||| |||||||||||||||    
T  17499874 ttgtttcaaaatgaatgtcgctttacatttccaat 17499840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 28116321 - 28116398
Alignment:
Q  121 aacttttctctcaaaca--attttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||| |||  ||||||| || |||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  28116321 aacttttctctcacacacaattttcagtgtaactttaagtttgtcttattcttataaagtaaggttattttagtaaaa 28116398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 55126573 - 55126650
Alignment:
Q  121 aacttttctctc--aaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||  | |||||||||  ||||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  55126573 aacttttctctcctacacaattttccttgcaactttaagtttgtcttattcttataaagtaaggttattttagtaaaa 55126650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 31987306 - 31987343
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  31987306 aaaatgaatgtcactttacatttctaatacaactttaa 31987343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 45520607 - 45520570
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  45520607 aaaatgaatgtcactttacattttcaatacaactttaa 45520570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 6232191 - 6232147
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  6232191 ttgtttcaaaataaatgtcaatttacattttcaatacaactttaa 6232147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 6510113 - 6510157
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||| |||||||||||| |||| ||||||| ||||||    
T  6510113 ttgtttcaaaataaatgtcactttatattttcaatacaactttaa 6510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 19878891 - 19878855
Alignment:
Q  16 tatactcccttcgtttcaaaatgaatgtcactttagc 52  Q
    |||||||||| |||||||||||||||||| |||||||    
T  19878891 tatactccctccgtttcaaaatgaatgtcgctttagc 19878855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 22212336 - 22212380
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||||| |||||||||||||| | ||||||    
T  22212336 ttgttttaaaatgaatgtcaccttacatttccaatataactttaa 22212380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 31987377 - 31987429
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||||||||  | |||||||||||||||||||| | ||||| |||||    
T  31987377 tccaacttttctctcgcataattttcaatgcaactttaaatttgtctttttct 31987429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 35928486 - 35928530
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||| ||| ||||||||||||| ||||||| ||||||    
T  35928486 ttgtttcaaaataaatatcactttacattttcaatacaactttaa 35928530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 35928579 - 35928643
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtg 199  Q
    |||||||||||||||| ||||||| | ||| ||||| ||||||| | | || |||||||||||||    
T  35928579 acaattttcaatgcaattttaagtttatctttttcttataaagtcatggcaatttagtaaaagtg 35928643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 35239390 - 35239556
Alignment:
Q  69 tcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgttt 168  Q
    |||||||||||||||||||||||||| |||||| ||||||       |||||||||||||||||| |||||||||| ||||||||||||| ||||| |||    
T  35239390 tcaaaatgaatgtcactttacatttctaatacaactttaatttttt-cttccaacttttctctcacacaattttcactgcaactttaagtttgtcttttt 35239488  T
Q  169 ctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatct 236  Q
    || ||||||||||| ||||||||||||| || |||| ||||||||||||| ||||||||  |||||||    
T  35239489 cttataaagtaaggacagtttagtaaaaatgttatgcctaatgattattttattcaattttttaatct 35239556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 38457537 - 38457658
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||| ||||||| | ||| ||||||||||||||| | |||||||||||||||| ||||  |||||||||||    
T  38457537 tccaacttttctctcacacaattttcaatgcaattttaagtttatctttttctaataaagtaatggcagtttagtaaaagtgttatgtgtaatgattatt 38457636  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||||||| |||||| ||||    
T  38457637 tcattcaatttcttaatttgtg 38457658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 790095 - 790228
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||       |||| ||||||||||||| ||||||| |||||||||||||| | || |    
T  790095 ttgtttcaaaattaatgtcactttacatttccaatacaactttaatttttttcttcaaacttttctctcacacaatttccaatgcaactttaattttgac 790194  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaag 197  Q
    | ||||| ||||||||||| ||||||||||||||    
T  790195 tttttcttataaagtaagggcagtttagtaaaag 790228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 2568082 - 2567970
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattc 223  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| || ||| ||||||||| |||  ||||||||||||| ||||    
T  2568082 ttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaaggacatttttgtaaaagtgttatatctaatgattatttcattc 2567983  T
Q  224 aattccttaatct 236  Q
    |||||||||||||    
T  2567982 aattccttaatct 2567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 238
Target Start/End: Complemental strand, 38165783 - 38165617
Alignment:
Q  77 aatgtcactttacatttccaatacagctttaannnnnnn-cttccaacttttctctcaaacaattttca----atgcaactttaagtgtgtctgtttcta 171  Q
    ||||||||||||||||||||||||| ||||||        |||||||||||||||||| ||||||| ||    |||||||||||||| ||||| |||||     
T  38165783 aatgtcactttacatttccaatacaactttaattttttttcttccaacttttctctcacacaatttccatccaatgcaactttaagtttgtctttttctt 38165684  T
Q  172 ataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgt 238  Q
    ||||||||||| |||||||||||||||| ||||  |||||||||||| |||  ||||||||||||||    
T  38165683 ataaagtaaggacagtttagtaaaagtgttatgtttaatgattatttcattacattccttaatctgt 38165617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 27483269 - 27483148
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||| ||||| |||||||||||  | ||||||||||||| |||| ||||||||||||    
T  27483269 tccaacttttctctcacataattttcaatgcaactttaagtttgtctttttcttataaagtaagggaaatttagtaaaagtgttatgtctaatgattatt 27483170  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||| ||||    
T  27483169 tcatttcattccttaatttgtg 27483148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 46363086 - 46362965
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| ||||||| |||||||||||||| | ||| | ||||| ||||||||||| ||||||||||||| || || | ||||||||||||    
T  46363086 tccaacttttctctcacacaatttacaatgcaactttaaatttgtatttttcttataaagtaaggacagtttagtaaaaatgttaggtctaatgattatt 46362987  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | ||||||||||||||| ||||    
T  46362986 tcattcaattccttaatatgtg 46362965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 1341005 - 1340887
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||| | || ||||| ||||||| |||| ||||| ||||||    
T  1341005 tccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaaagacactttagaaaaagtgttatgtctaattattatt 1340906  T
Q  218 tgattcaattccttaatct 236  Q
    | |||| |||| |||||||    
T  1340905 tcattccattctttaatct 1340887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 25061772 - 25061891
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| |  |||| |||||||||||  ||||||||||||||| |||| ||||||||||||    
T  25061772 tccaacttttctctcatacaattttcaatgcaactttaagtttgttt--ttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatt 25061869  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||| ||||    
T  25061870 tcatttcattccttaatatgtg 25061891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 44648487 - 44648365
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgttt-ctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    |||||||||| ||||| |||||||||||| ||||||||||| ||||| ||| || ||||||||| | |||||||||||||||| |||| |||||||||||    
T  44648487 tccaacttttttctcacacaattttcaattcaactttaagtttgtcttttttctcataaagtaaaggcagtttagtaaaagtgttatgtctaatgattat 44648388  T
Q  217 ttgattcaattccttaatctgtg 239  Q
    || |||  |||||||||||||||    
T  44648387 ttcatttcattccttaatctgtg 44648365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 26965584 - 26965463
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||||||||||| | |||  | ||||||||||    
T  26965584 tccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgattatt 26965485  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  ||| |||||||||||    
T  26965484 tcattttatttcttaatctgtg 26965463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 65 - 218
Target Start/End: Original strand, 53716029 - 53716180
Alignment:
Q  65 tgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||       |||||||||||||||||| ||| ||||||||||||||||||   |||||    
T  53716029 tgttttaaaatgaatgttactttacatttccaatacaactttaatttttttcttccaacttttctctcacacagttttcaatgcaactttaa--ttgtct 53716126  T
Q  165 gtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
     ||||| ||||||||||  |||||||||||||| | |||  | |||||||||||    
T  53716127 ttttcttataaagtaagagcagtttagtaaaagcgttatatccaatgattattt 53716180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 44854391 - 44854508
Alignment:
Q  118 tccaacttttctctcaa-acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||| | ||||| ||||||||||| ||||||||||||||||   || |||||||||||    
T  44854391 tccaacttttctctcagtacaattttcaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaagtg--ttgtctaatgattat 44854488  T
Q  217 ttgattcaattccttaatct 236  Q
    || ||||||||| |||||||    
T  44854489 ttcattcaattcattaatct 44854508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 2662562 - 2662447
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattc 223  Q
    |||||||||| |||||||||||||||||||||| | ||||| ||||| ||||| ||||| || ||||||||||||| |||| ||||||||||||| |||     
T  2662562 ttttctctcacacaattttcaatgcaactttaaatttgtctttttcttataaaataagggcaatttagtaaaagtgttatgtctaatgattatttcattt 2662463  T
Q  224 aattccttaatctgtg 239  Q
     |||| ||||||||||    
T  2662462 gattctttaatctgtg 2662447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 31291047 - 31290929
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||||||||||| |||||||||| ||||||||||||| | ||| ||||||||||| ||| | |||||||||||||||| |||| ||||| |||||||     
T  31291047 caacttttctctcacacaattttcattgcaactttaagttt-tctttttctaataaaataaaggcagtttagtaaaagtgttatgtctaataattatttc 31290949  T
Q  220 attcaattccttaatctgtg 239  Q
    |||  |||||||||||||||    
T  31290948 atttcattccttaatctgtg 31290929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 83375 - 83493
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| ||||| |||||||||||  ||||||||||||||| | || |||||||||| || |    
T  83375 aacttttctctcacgcaattttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttgtgtctaatgattaattca 83474  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||  |||||||||| ||||    
T  83475 tttcattccttaatttgtg 83493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 647665 - 647547
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||||| | | |||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||| || |||  ||||||||||||| |    
T  647665 aacttttctcttacagaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaactgttatatctaatgattatttca 647566  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||  ||| |||||||||||    
T  647565 tttcatttcttaatctgtg 647547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 37225668 - 37225553
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||||||| |||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||  |||  | ||||||||||| |    
T  37225668 aacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaggacagtttagtaaaagtattatatccaatgattatttca 37225569  T
Q  221 ttcaattccttaatct 236  Q
    ||  ||| ||||||||    
T  37225568 ttgtatttcttaatct 37225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 36771652 - 36771531
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||| ||||  ||||||||||||| |  |||| ||||| ||||||    
T  36771652 tccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaaataagagcagtttagtaaaaatattatgtctaataattatt 36771553  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  ||| |||||| ||||    
T  36771552 tcattatatttcttaatatgtg 36771531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 40048953 - 40049067
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |  ||||||||||||||||||| | ||||| ||||| ||||||||| | || |||| |||||||| |||| ||||||||||||    
T  40048953 tccaacttttctctcata--attttcaatgcaactttaaatttgtctttttcttataaagtaaaggcaatttaataaaagtgttatgtctaatgattatt 40049050  T
Q  218 tgattcaattccttaat 234  Q
    | |||| ||||||||||    
T  40049051 tcattccattccttaat 40049067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 20512561 - 20512449
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaat 226  Q
    ||||||| |||||||||||| ||||||||||| ||| | ||||| |||||||||||| | |||||||||| || |||| |   ||| ||||| |||||||    
T  20512561 tctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaat 20512462  T
Q  227 tccttaatctgtg 239  Q
    | |||||||||||    
T  20512461 ttcttaatctgtg 20512449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 19552611 - 19552686
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||| | |||||||||||||||||||| | ||| | ||||| ||||||||||| |||||||||||||    
T  19552611 aacttttctctcacagaattttcaatgcaactttaattttgtatttttcttataaagtaaggacagtttagtaaaa 19552686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 41287166 - 41287255
Alignment:
Q  129 tctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||| |||||||||||||||||||||||| ||  | ||||  ||||| ||||  |||||||||||||||| |||| |||||||||||||    
T  41287166 tctcacacaattttcaatgcaactttaagtttgagtttttcatataaaataagtgcagtttagtaaaagtgttatgtctaatgattattt 41287255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 43580560 - 43580677
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttc-ta-ataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgat 221  Q
    |||| ||||| |||||||||||||||||||||| | ||||| |||| || |||||  |||| ||||||||||||| || |||   |||||||||||| ||    
T  43580560 ttttttctcacacaattttcaatgcaactttaaatttgtctttttcatatataaaacaagggcagtttagtaaaaatgttatatgtaatgattatttcat 43580659  T
Q  222 tcaattccttaatctgtg 239  Q
    || |||||||||||||||    
T  43580660 tctattccttaatctgtg 43580677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 51381812 - 51381881
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| ||||| ||| | |||||||||||| | ||||||||||    
T  51381812 tctctcacacaattttcaatgcaactttaagtttgtctttttattataaagtaaggttattttagtaaaa 51381881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 54933270 - 54933201
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| ||||  ||||| |||||||||||| | ||||||||||    
T  54933270 tctctcacacaattttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaa 54933201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 37225749 - 37225705
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  37225749 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 37225705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 54261503 - 54261615
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaat 226  Q
    ||||||| |||||||||||| ||||||||||| ||| | ||||| |||||||||||| | |||||||||| || |||| |   ||| || || |||||||    
T  54261503 tctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaat 54261602  T
Q  227 tccttaatctgtg 239  Q
    | |||||||||||    
T  54261603 ttcttaatctgtg 54261615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 5244668 - 5244782
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattc 223  Q
    |||||||||| |  ||||||||||||||||||||| ||| | ||||| |||| |||| |  | |||| |||||||| |||| ||||||||||||| ||||    
T  5244668 ttttctctcacattattttcaatgcaactttaagtttgtttttttcttataa-gtaaagagactttaataaaagtgttatgtctaatgattatttcattc 5244766  T
Q  224 aattccttaatctgtg 239  Q
    |||| |||||| ||||    
T  5244767 aatttcttaatatgtg 5244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 27483337 - 27483294
Alignment:
Q  65 tgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  27483337 tgtttcaaaatgaatgtcactttacatttccaatacaactttaa 27483294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 34059944 - 34060020
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||  ||||||||||||||||||||||   ||||| ||||| |||||||||||  ||||||||||||    
T  34059944 tccaacttttctctcgcacaattttcaatgcaactttaa--ttgtctttttcttataaagtaagggtagtttagtaaaa 34060020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 27039404 - 27039486
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc-tgtttctaataaagtaaggtcagtttagtaaaagtg 199  Q
    ||||||||| |||||| |||||||||||||||||||||| | |||| | ||| | ||||||||||| || |||||||||||||    
T  27039404 tccaactttcctctcacacaattttcaatgcaactttaaatttgtctttttttttataaagtaaggacactttagtaaaagtg 27039486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 2988667 - 2988606
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  2988667 acaattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaa 2988606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 2988763 - 2988726
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2988763 ttgtttcaaaatgaatgtcactttacatttccaataca 2988726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 25722526 - 25722457
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| |||||  ||||  ||||||||||| | ||||||||||    
T  25722526 tctctcacacaattttcaatgcaactttaagtttgtcttattcttgtaaagtaaggttattttagtaaaa 25722457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 43169422 - 43169491
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||| ||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  43169422 tctctcacacaattttcaatacaactttaagtttgtcttattcttataaagtaaggttattttagtaaaa 43169491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 53560752 - 53560821
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| | |||||||||||||||||||||  ||||| ||||| |||||||||||| | ||||||||||    
T  53560752 tctctcacataattttcaatgcaactttaagattgtctttttcttataaagtaaggttattttagtaaaa 53560821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 3000830 - 3000882
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| |||||    
T  3000830 tccaacttttctctcacacaattttcaatgcaactttaaatttgtctttttct 3000882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 4391981 - 4392033
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||| |||||    
T  4391981 tccaacttttctctcgcacaattttcaatgcaactttaagtttgtctttttct 4392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 13485959 - 13485915
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  13485959 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaa 13485915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 26965653 - 26965609
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  26965653 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 26965609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 43169333 - 43169377
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  43169333 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaa 43169377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 46363165 - 46363121
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  46363165 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 46363121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 54933359 - 54933315
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  54933359 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaa 54933315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 16240654 - 16240705
Alignment:
Q  119 ccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||| |||||    
T  16240654 ccaacttttctctcgcacaattttcaatgcaactttaagtttgtctttttct 16240705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 27027810 - 27027910
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc----tgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgat 213  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||    | ||| | ||||||||||| || |||| |||||||| ||||  |||||||    
T  27027810 tccaacttttctctcacacaattttcaatgcaactttaaatttgtcttttttttttttataaagtaaggacactttattaaaagtgttatgtttaatgat 27027909  T
Q  214 t 214  Q
    |    
T  27027910 t 27027910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 43599906 - 43599855
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttc 169  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||| ||||    
T  43599906 tccaacttttctctcacacaatttttaatgcaactttaagtttgtctttttc 43599855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 44648555 - 44648512
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagcttta 107  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  44648555 ttgttttaaaatgaatgtcactttacatttccaatacaacttta 44648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 25722612 - 25722571
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  25722612 tttcaaaatgaatgtcactttacattttcaatacaactttaa 25722571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 43687948 - 43687879
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| ||||||||||||| |||||||| | |||||  |||| |||||||||||| | ||||||||||    
T  43687948 tctctcacacaattttcaatgaaactttaaatttgtcttgttcttataaagtaaggttattttagtaaaa 43687879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 83295 - 83339
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  83295 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaa 83339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 19552539 - 19552583
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  19552539 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 19552583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 25061703 - 25061747
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||    
T  25061703 ttgttttaaaatgaatgccactttacatttccaatacaactttaa 25061747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 36771721 - 36771677
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  36771721 ttgttttaaaatgaatgtcactttacatttacaatacaactttaa 36771677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 42007130 - 42007058
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||| ||| |||||||||||||||||||||||| |||||  |||| ||||| |||||| | ||||| ||||    
T  42007130 ttttctttcatacaattttcaatgcaactttaagtttgtcttgttcttataaaataaggttattttagaaaaa 42007058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 42791378 - 42791418
Alignment:
Q  116 cttccaacttttctctcaaacaattttcaatgcaactttaa 156  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  42791378 cttccaacttttctctcacataattttcaatgcaactttaa 42791418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 43580474 - 43580518
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||    
T  43580474 ttgtttcaaaataaatgtcactttacattttcaatacaactttaa 43580518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 43688040 - 43687996
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||||    
T  43688040 ttgttccaaaataaatgtcactttacatttccaatacaactttaa 43687996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 51381720 - 51381764
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||    
T  51381720 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 51381764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 52202445 - 52202364
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaa 145  Q
    |||||| ||||||||||||  ||| ||||| ||||||| ||||||       |||||||||||||||||| |||||||||||    
T  52202445 ttgttttaaaatgaatgtcgttttgcattttcaatacaactttaatttttttcttccaacttttctctcacacaattttcaa 52202364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 36310404 - 36310361
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagcttta 107  Q
    |||||||||||| ||||||| ||||||||||||||||| |||||    
T  36310404 ttgtttcaaaataaatgtcattttacatttccaatacaacttta 36310361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 42857101 - 42857046
Alignment:
Q  184 cagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    ||||||||||||| || |||| ||||||||||||| |||  |||||||||||||||    
T  42857101 cagtttagtaaaaatgttatgtctaatgattatttcatttgattccttaatctgtg 42857046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 4476434 - 4476338
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    |||||||| ||||| |||||||||||||||||||||||  | | | ||| | ||||| ||||| ||| |||||||||||| || | |||||||||||||    
T  4476434 caacttttttctcacacaattttcaatgcaactttaagcttat-tattttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattattt 4476338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 15514801 - 15514755
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    |||||||||||||||  | |||||||||||||||||||||| |||||    
T  15514801 tccaacttttctctcgcataattttcaatgcaactttaagtttgtct 15514755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 32303978 - 32303901
Alignment:
Q  121 aacttttctctc--aaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||  | |||||||||||| || |||||||| || || ||||| |||||||||||| | ||||||||||    
T  32303978 aacttttctctcttacacaattttcaatacagctttaagtttgcctttttcttataaagtaaggttattttagtaaaa 32303901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 36541567 - 36541648
Alignment:
Q  117 ttccaacttttctctc--aaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||||||  | ||||||||| |||||||||||||| |||||  |||  |||||| ||||| | ||||||||||    
T  36541567 ttccaacttttctctctcacacaattttcgatgcaactttaagtttgtcttgttcctataaagcaaggtaattttagtaaaa 36541648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 42740302 - 42740399
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    |||||||| ||||| |||||||||||||||||||||||  | |   ||| | ||||| ||||| ||| |||||||||||| || | |||||||||||||    
T  42740302 caacttttttctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattattt 42740399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 43599570 - 43599508
Alignment:
Q  172 ataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
    ||||| ||||| |||||||||||||||  |||| ||||||||||||| |||  ||||||||||    
T  43599570 ataaaataagggcagtttagtaaaagtattatgtctaatgattatttcatttcattccttaat 43599508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 1341067 - 1341030
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  1341067 aaaatgaatgtcactttacattttcaatacaactttaa 1341030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 9167744 - 9167648
Alignment:
Q  138 attttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatc 235  Q
    ||||||||||||| ||||||| | | | ||| ||||||||||||| ||||||||||||| || ||||   ||||||||||| |||   ||||||||||    
T  9167744 attttcaatgcaattttaagttttttttttt-taataaagtaagggcagtttagtaaaaatgttatgtgaaatgattatttcattaccttccttaatc 9167648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 27027732 - 27027769
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  27027732 ttgtttcaaaattaatgtcaatttacatttccaataca 27027769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 35099439 - 35099390
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    ||||||||||||  |||||||||||||||| ||||||| ||||| |||||    
T  35099439 aacttttctctcgcacaattttcaatgcaattttaagtttgtctttttct 35099390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 41287082 - 41287119
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  41287082 aaaatggatgtcactttacatttccaatacaactttaa 41287119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 43736922 - 43736846
Alignment:
Q  141 ttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    |||||||||||||||||| | ||| ||||| ||||| ||||   ||||||||||||||| |||  |||||||||||||    
T  43736922 ttcaatgcaactttaagttt-tctttttcttataaaataagagtagtttagtaaaagtgttatatctaatgattattt 43736846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 44854314 - 44854351
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  44854314 ttgtttcaaaatgaacgtcactttacattttcaataca 44854351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 45095559 - 45095596
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  45095559 aaaatgaatgtcactttacattttcaatacaactttaa 45095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 2568157 - 2568113
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  2568157 ttgttttaaaatgaatgttactttacattttcaatacaactttaa 2568113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 3000751 - 3000795
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||| ||||||||||| ||||||| ||||||    
T  3000751 ttgttttaaaatgaatgttactttacattttcaatacaactttaa 3000795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 15514872 - 15514836
Alignment:
Q  72 aaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  15514872 aaataaatgtcactttacatttccaatacaactttaa 15514836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 20512651 - 20512607
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||    
T  20512651 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 20512607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 22730924 - 22730968
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  22730924 ttgttttaaactgaatgtcaatttacatttccaatacaactttaa 22730968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 22731035 - 22731126
Alignment:
Q  144 aatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatct 236  Q
    |||| |||||||||| ||||| ||||| ||||| | ||| ||||||||||||| || ||||  |||||||||||| |||  ||| ||||||||    
T  22731035 aatgtaactttaagtttgtctttttcttataaattgagg-cagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatct 22731126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 32304051 - 32304015
Alignment:
Q  72 aaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  32304051 aaatgaatgtcactttacattttcaatacaactttaa 32304015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 34059875 - 34059919
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||| ||||||||| ||||||| ||||||    
T  34059875 ttgttttaaaatgaatgtcattttacattttcaatacaactttaa 34059919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 44645415 - 44645482
Alignment:
Q  118 tccaacttttctctcaaaca--attttcaatgcaactttaagtgtgtctgtttctaataaagtaaggt 183  Q
    |||||||||||||||  |||  ||||||||||||||||||||| | ||| ||||  ||||||||||||    
T  44645415 tccaacttttctctcttacataattttcaatgcaactttaagtttatctttttcatataaagtaaggt 44645482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 49470788 - 49470832
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||  ||||||||| ||||||| ||||||    
T  49470788 ttgtttcaaaatgaatgtcgttttacattttcaatacaactttaa 49470832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 64 - 236
Target Start/End: Original strand, 34225771 - 34225944
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnn-cttccaacttttctctcaaacaattttcaatgcaactttaagtgtgt 162  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||        |||||||||||||||||| |||||||||||||||||||||||| |||    
T  34225771 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttctctcacacaattttcaatgcaactttaagtttgt 34225870  T
Q  163 ctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatct 236  Q
    || ||||| ||||||||||| || |||||||||| |  |||| ||||||||||||| |||  ||||||||||||    
T  34225871 ctttttcttataaagtaagggcaatttagtaaaattattatgtctaatgattatttcatttcattccttaatct 34225944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 65 - 194
Target Start/End: Complemental strand, 4766341 - 4766212
Alignment:
Q  65 tgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||       |||||||||||||||||| |||||||||||||||||||||| | |||||    
T  4766341 tgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttccaacttttctctcacacaattttcaatgcaactttaattttgtct 4766242  T
Q  165 gtttctaataaagtaaggtcagtttagtaa 194  Q
     ||||| ||||||||| | |||||||||||    
T  4766241 ttttcttataaagtaaaggcagtttagtaa 4766212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 14378371 - 14378203
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    ||||||||||||||||||||||| ||||||| ||||||       || ||||||||||||||  | |||||||||||||||||||| | | ||| |||||    
T  14378371 aaaatgaatgtcactttacattttcaatacaactttaatttttttctcccaacttttctctcgcataattttcaatgcaactttaaatttatctttttct 14378272  T
Q  171 aataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
     ||||||||||| |||||||||||||||| |||    ||||||||||| |||| |||| |||| |||||    
T  14378271 tataaagtaagggcagtttagtaaaagtgttatattaaatgattatttcattctattcattaaactgtg 14378203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 7743477 - 7743598
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| ||||| ||||||||||| ||  |||||||||||| |||  || |||||||||    
T  7743477 tccaacttttctctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaagggcaacttagtaaaagtgttatatctgatgattatt 7743576  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | ||| ||||| ||||||||||    
T  7743577 tcatttaattctttaatctgtg 7743598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 29795275 - 29795156
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||| ||| ||||||||||||||||||||||   ||||| ||||| ||||| ||||| |||||||||||||||  |||| ||||||||||||    
T  29795275 tccaacttttctttcacacaattttcaatgcaactttaaagttgtctttttcttataaaataagggcagtttagtaaaagtattatgtctaatgattatt 29795176  T
Q  218 tgattcaattccttaatctg 237  Q
    | |||| |||| ||||||||    
T  29795175 tcattccattcattaatctg 29795156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 40987356 - 40987237
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||||||||||||||  ||||||||||||||||||||| | | ||| ||||| ||||||||||| || ||||||||||||| |||| ||||||||||||    
T  40987356 tccaacttttctctca--caattttcaatgcaactttaaatttatctttttcttataaagtaaggacaatttagtaaaagtgttatgtctaatgattatt 40987259  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||| ||||    
T  40987258 tcatttcattccttaatatgtg 40987237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 14698010 - 14698187
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctc--aaacaattttcaatgcaactttaagtgtg 161  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||       |||||||||||||||||  | |||||||||||| ||||||||||| ||    
T  14698010 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaacttttctctctcacacaattttcaatacaactttaagtttg 14698109  T
Q  162 tctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    | | ||||| |||||||||||| | |||||||||| || |||| |   ||| || || |||||||| |||||||||||    
T  14698110 tatttttcttataaagtaaggttattttagtaaaattgctatgacatttgactactttattcaatttcttaatctgtg 14698187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 24775267 - 24775386
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||||||||||| ||||||||||||  |||||||||| ||| | ||||| ||||||||||  || ||||||||||||| |||  |||||||||||||     
T  24775267 caacttttctctcacacaattttcaatataactttaagtttgtttttttcttataaagtaagagcattttagtaaaagtgttatatctaatgattatttc 24775366  T
Q  220 attcaattccttaatctgtg 239  Q
    ||||||| ||||||| ||||    
T  24775367 attcaataccttaatttgtg 24775386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 1381817 - 1381915
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||||||||||||||  ||||||||||||||| ||||||| | ||| ||||| ||||||||||  |||||||||||||||| |||| ||||||||||||    
T  1381817 tccaacttttctctca--caattttcaatgcaattttaagtttttctttttcttataaagtaagagcagtttagtaaaagtgttatgtctaatgattatt 1381914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 40410519 - 40410640
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||| | |||||||||||||||||||||| | ||||| ||||| ||||||||||| ||||||| |||||| | |||  | |||||||||     
T  40410519 tccaacttttctctgacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttaataaaagcgttatatccaatgattatg 40410618  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||| ||| |||||||||||    
T  40410619 tcattccatttcttaatctgtg 40410640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 36360440 - 36360351
Alignment:
Q  129 tctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||| |||||||||||| ||||||||||| | ||| ||||| ||||| ||||| |||||||||||||||| |||| |||||||||||||    
T  36360440 tctcacacaattttcaatacaactttaagtttatctttttcttataaaataagggcagtttagtaaaagtgttatgtctaatgattattt 36360351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 37106938 - 37107061
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgttt--ctaataaagtaaggtcagtttagtaaaagtggtatggctaatgatta 215  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||| |||  || ||||||||||| || ||||||||||||| | || | ||| ||||    
T  37106938 tccaacttttctctcacacaattttcaatgcaactttaagtttttcttttttgcttataaagtaagggcaatttagtaaaagtgttgtgtcaaataatta 37107037  T
Q  216 tttgattcaattccttaatctgtg 239  Q
    ||| |||| ||| |||||| ||||    
T  37107038 tttcattccatttcttaatgtgtg 37107061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 1298856 - 1298778
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| | |||||||||||||||||||| | ||||| ||||| ||||||||||| || ||||||||||    
T  1298856 tccaacttttctctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaa 1298778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 4840800 - 4840682
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    |||||||||| || ||| |||||||||||||||||| | ||||| ||||| ||||||||||| |||||||||||||  | |||  | ||||||||||| |    
T  4840800 aacttttctcccacacagttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttca 4840701  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||| ||| |||||| ||||    
T  4840700 ttccatttcttaatatgtg 4840682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 4536523 - 4536616
Alignment:
Q  13 cattatactcccttcgtttcaaaatgaatgtcactttagcnnnnnnnnnnnttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||| ||||||||||||| ||||||||||||           |||||||||||||||||||||||||||||||||||||| ||||||    
T  4536523 cattatactccctccgtttcaaaatgagtgtcactttagccaaaaaaaa--ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 4536616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 25332657 - 25332769
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaat 226  Q
    ||||||| |||||||||||| ||||| ||||| ||||| ||||| |||||||||||| | |||||||||| || |||| |   ||| || || |||||||    
T  25332657 tctctcatacaattttcaatacaactctaagtttgtctttttcttataaagtaaggttattttagtaaaattgctatgacatttgactactttattcaat 25332756  T
Q  227 tccttaatctgtg 239  Q
    |||||||||||||    
T  25332757 tccttaatctgtg 25332769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 16316784 - 16316863
Alignment:
Q  117 ttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||| ||||| |||||||||||||||||||||| | ||||| ||||| ||| ||||||| || ||||||||||    
T  16316784 ttccaacttttatctcacacaattttcaatgcaactttaattttgtctttttcttatacagtaagggcaatttagtaaaa 16316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 43460851 - 43460930
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtg 199  Q
    |||||||||||||| | |||||||||| ||||||||| | ||||| || || ||||||||||| ||||||||||||||||    
T  43460851 caacttttctctcacataattttcaatacaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtg 43460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 43388730 - 43388612
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||||||| | |||||||||| ||||||||||| ||| | ||||| |||||||||||| | |||||||||| || |||| |   ||| || || |    
T  43388730 aacttttctctcacataattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactacttta 43388631  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||||||| |||||||||||    
T  43388630 ttcaatttcttaatctgtg 43388612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 29795344 - 29795300
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  29795344 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Complemental strand, 775943 - 775840
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
    |||||||||||||||||||||||| ||||| ||||| ||||| |||||| | |||||||||| || |||| |   ||| || || |||| ||||||||||    
T  775943 acaattttcaatgcaactttaagtttgtctttttcttataaattaaggttattttagtaaaattgttatgacatttgactactttattctattccttaat 775844  T
Q  235 ctgt 238  Q
    ||||    
T  775843 ctgt 775840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 1360255 - 1360365
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| |||||          |  ||||||||||||||||  |||||||||||||||||     
T  1360255 caacttttctcttaaacaattttcaatgcaactttaagtttgtctttttct---------tgtgcagtttagtaaaagtgtcatggctaatgattatttt 1360345  T
Q  220 attcaattccttaatctgtg 239  Q
    |||| ||| |||||| ||||    
T  1360346 attccattacttaatttgtg 1360365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 39866741 - 39866626
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattc 223  Q
    |||||||||| |||||||||||| ||||||||||| ||||  |||||  ||||||||||| | |||||||||| || |||| |   ||| || || ||||    
T  39866741 ttttctctcacacaattttcaatacaactttaagtttgtcattttcttgtaaagtaaggttattttagtaaaattgctatgacatttgactactttattc 39866642  T
Q  224 aattccttaatctgtg 239  Q
     |||||||||||||||    
T  39866641 cattccttaatctgtg 39866626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 11171839 - 11171940
Alignment:
Q  138 attttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctg 237  Q
    |||| ||||| |||||||||| ||||| ||||  ||||||| |||  | ||||||||||||| |||| ||| ||||||||| |||||||| |||||| ||    
T  11171839 atttccaatgtaactttaagtttgtctttttcgcataaagttaggataatttagtaaaagtgttatgtctattgattattttattcaatttcttaatttg 11171938  T
Q  238 tg 239  Q
    ||    
T  11171939 tg 11171940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 1360175 - 1360219
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  1360175 ttgtttcaaaatgaatgtcactttgcatttccaatacaactttaa 1360219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 4840881 - 4840837
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  4840881 ttgttccaaaatgaatgtcactttacatttccaatacaactttaa 4840837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 33093366 - 33093410
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  33093366 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 33093410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 45148106 - 45148014
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaag 157  Q
    |||||| ||||||||||||||||||||||| ||||| | ||||||       |||| || |||||||||| |||||||| ||||||||||||||    
T  45148106 ttgttttaaaatgaatgtcactttacattttcaataaaactttaa-ttttttcttcaaatttttctctcacacaatttttaatgcaactttaag 45148014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 7743401 - 7743443
Alignment:
Q  66 gtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaactttaa 7743443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 41984494 - 41984575
Alignment:
Q  118 tccaacttttctctcaaaca--attttcaatgcaactttaag-tgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| |||  |||||||||||||||||||| | |||||  |||| |||||||||||| | ||||||||||    
T  41984494 tccaacttttctctcacacacaattttcaatgcaactttaagttttgtcttattcttataaagtaaggttattttagtaaaa 41984575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 1298931 - 1298890
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||| |||||| ||||||    
T  1298931 tttcaaaatgaatgtcactttacatttctaatacaactttaa 1298890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 4566188 - 4566119
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||| | | ||| ||||| ||||| |||||| | ||||||||||    
T  4566188 tctctcacacaattttcaatgcaactttaaatttatctttttcttataaaataaggttattttagtaaaa 4566119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 18374918 - 18374883
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaata 99  Q
    |||||| |||||||||||||||||||||||||||||    
T  18374918 ttgtttgaaaatgaatgtcactttacatttccaata 18374883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 42969967 - 42970081
Alignment:
Q  119 ccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||||||| ||||| |||||||||||||||||||||||  | ||  ||| | ||||| ||||  ||| |||||||||||| || | ||||| |||||||    
T  42969967 ccaacttttttctcacacaattttcaatgcaactttaaggttatcatttttttataaaataagagcag-ttagtaaaagtgttacgtctaataattattt 42970065  T
Q  219 gattcaattccttaat 234  Q
     |||  ||||||||||    
T  42970066 cattgcattccttaat 42970081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 4536704 - 4536754
Alignment:
Q  184 cagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
    |||||||||||||||| |||| ||||||||||||| |||  ||||||||||    
T  4536704 cagtttagtaaaagtgatatgtctaatgattatttcatttcattccttaat 4536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 43344293 - 43344199
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    |||||||||| | |||||||||| |||||||||   | ||| ||||| |||||||||||   ||||| ||||| || |||| |||||||||||||    
T  43344293 ttttctctcacataattttcaatacaactttaaacttatctttttcttataaagtaagggtggtttaataaaattgttatgtctaatgattattt 43344199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 2459860 - 2459929
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| ||||   |||| ||||| ||||||   ||||||||||    
T  2459860 tctctcacacaattttcaatgcaactttaagtttgtcctattcttataaaataaggttgttttagtaaaa 2459929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 16316710 - 16316751
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||| |||||||||||||| |||||||||||| ||||||    
T  16316710 tttcaaattgaatgtcactttatatttccaatacaactttaa 16316751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 45372686 - 45372649
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  45372686 ttgttttaaaatgaatgtcactttacattttcaataca 45372649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 776039 - 775995
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||    
T  776039 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 775995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 2459771 - 2459815
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||| ||||||||||||||| || ||||||    
T  2459771 ttgttttaaaatgaatgtcgctttacatttccaatgcaactttaa 2459815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 6591963 - 6592007
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||| ||| ||||||||||||||||| ||||||    
T  6591963 ttgttttaaaatgaatatcattttacatttccaatacaactttaa 6592007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 10581012 - 10580968
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||| |||||||| |||| ||||||| ||||||    
T  10581012 ttgtttcaaaatgaatatcactttatattttcaatacaactttaa 10580968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 33093443 - 33093486
Alignment:
Q  117 ttccaacttttctc--tcaaacaattttcaatgcaactttaagt 158  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  33093443 ttccaacttttctccctcacacaattttcaatgcaactttaagt 33093486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 43344375 - 43344331
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||| ||| |||| ||||||| ||||||    
T  43344375 ttgtttcaaaatgaatgtcaccttatattttcaatacaactttaa 43344331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 43388811 - 43388767
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||    
T  43388811 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 43388767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 38329184 - 38329010
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||| |||||||||||||||||| |||| ||||||| ||||||       ||| ||||||| | |||| |||||||||||||||||||||||| ||||    
T  38329184 ttgttttaaaatgaatgtcactttatattttcaatacaactttaatttttttctttcaactttaccctcacacaattttcaatgcaactttaagtttgtc 38329085  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    | ||  | ||||||||||| |||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||    
T  38329084 ttttgattataaagtaagg-cagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatctgtg 38329010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 8471279 - 8471421
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctc--aaacaattttcaatgcaactttaagtgtg 161  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||       |||||||||||||||||  | |||||||||||||||||||||||| ||    
T  8471279 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttccaacttttctctctcacacaattttcaatgcaactttaagtttg 8471378  T
Q  162 tctgtttctaataaagtaaggtcagtttagtaaaagtggtatg 204  Q
    ||| ||||| |||||||||||| | |||||||||| |||||||    
T  8471379 tctttttcttataaagtaaggttattttagtaaaattggtatg 8471421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 199
Target Start/End: Complemental strand, 18666672 - 18666540
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtg-tgtctg 165  Q
    |||||||||||||||||||||||||||||||| || |||||        |||||||||||||||||| |||||||| ||||||||||| |||| |||||     
T  18666672 tttcaaaatgaatgtcactttacatttccaatgcaactttagtttttttcttccaacttttctctcacacaatttttaatgcaacttt-agtgttgtctt 18666574  T
Q  166 tttctaataaagtaaggtcagtttagtaaaagtg 199  Q
    ||||| ||||||||||| ||||||||||||||||    
T  18666573 tttcttataaagtaaggacagtttagtaaaagtg 18666540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 7129302 - 7129432
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgt 166  Q
    ||||||||||||||||||||||||||| |||| || ||||||       |||||||||||||||||| ||||||| |||||||||||||| | |||||      
T  7129302 tttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaacttttctctcacacaatttccaatgcaactttaattttgtctta 7129401  T
Q  167 ttctaataaagtaaggtcagtttagtaaaag 197  Q
    |||| |||||||||  |||||||||||||||    
T  7129402 ttcttataaagtaaaatcagtttagtaaaag 7129432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 6839282 - 6839404
Alignment:
Q  117 ttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    ||||||||||||||||| | |||||||||||||| |||| || ||||| ||||| ||||||||| | || ||||||||||||| |||| |||||||||||    
T  6839282 ttccaacttttctctcacataattttcaatgcaattttatgtttgtctttttcttataaagtaaaggcaatttagtaaaagtgttatgtctaatgattat 6839381  T
Q  217 ttgattcaattccttaatctgtg 239  Q
    || |||| |||  ||||||||||    
T  6839382 ttcattccattttttaatctgtg 6839404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 7612574 - 7612694
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| ||||| ||||||||||| |||||||||||| | | |||  | ||||||||||    
T  7612574 tccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaa-gcgttatatccaatgattatt 7612672  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||| ||| |||||||||||    
T  7612673 tcattctatttcttaatctgtg 7612694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 32326801 - 32326680
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| |||||||||||||||||||||| | ||||| ||||  |||||  |||| |||||||||||||||| || | ||||||||||||    
T  32326801 tccaacttttttctcacacaattttcaatgcaactttaaatttgtctttttcatataaaacaagggcagtttagtaaaagtgttacgtctaatgattatt 32326702  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||||||||    
T  32326701 tcatttcattccttaatctgtg 32326680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 45187367 - 45187251
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    |||||||||||||  |||||||||| |||||||||||| ||||| ||||| |||||  |||| ||||||||||||||||  ||| ||||||||||||| |    
T  45187367 aacttttctctca--caattttcaaagcaactttaagtttgtctttttcttataaaacaaggacagtttagtaaaagtgtcatgtctaatgattatttca 45187270  T
Q  221 ttcaattccttaatctgtg 239  Q
    ||  |||||||||||||||    
T  45187269 ttatattccttaatctgtg 45187251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 41790268 - 41790117
Alignment:
Q  68 ttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnn-cttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgt 166  Q
    ||||||||||||||||||||||||||| |||||| ||||||        ||| |||||||||||||| |||||||||||| ||||||||| | ||||| |    
T  41790268 ttcaaaatgaatgtcactttacatttctaatacaactttaattttttttctttcaacttttctctcacacaattttcaatccaactttaaatttgtcttt 41790169  T
Q  167 ttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    |||| |||||| || | || |||| |||||||  |||| |||||||||||||    
T  41790168 ttcttataaagcaaagacaatttaataaaagtattatgtctaatgattattt 41790117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 22601211 - 22601332
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||| ||||||||| | |||||||||||||||||||||| ||||| ||||| ||||||||| | || ||||||||||| | |||| ||||||||||||    
T  22601211 tccaacctttctctcacagaattttcaatgcaactttaagtttgtctttttcttataaagtaaagacaatttagtaaaagagttatgtctaatgattatt 22601310  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||| ||||| ||||    
T  22601311 tcattttattcattaatatgtg 22601332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 30789011 - 30789111
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| | |||||||||| ||||||||| | ||||| ||||| ||||||||||| || |||| |||||||| |||| ||||||||||||    
T  30789011 tccaacttttctctcacataattttcaatacaactttaaatttgtctttttcttataaagtaaggacaatttaataaaagtgttatgtctaatgattatt 30789110  T
Q  218 t 218  Q
    |    
T  30789111 t 30789111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 11257618 - 11257694
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||| |  ||||||||||||    
T  11257618 caacttttctctcacacaattttcaatgcaactttaagtttgtctgtttcttataaaataaaggtagtttagtaaaa 11257694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 27109894 - 27109775
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagt-aaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||  ||||| ||||||| || | || ||||||||||||| |||  |||||||||||||     
T  27109894 aacttttctctcacacaatttccaatgcaactttaagtttgtccttttcttataaagtaaaagacaatttagtaaaagtgttatatctaatgattatttc 27109795  T
Q  220 attcaattccttaatctgtg 239  Q
    |||| ||| |||||| ||||    
T  27109794 attctatttcttaatatgtg 27109775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 36915458 - 36915561
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
    |||||||||||||||||||||||| ||||| ||||  |||||  |||| || |||||||||| |  |||| ||||||||||||| |||| ||||||||||    
T  36915458 acaattttcaatgcaactttaagtttgtctttttcatataaaacaagggcaatttagtaaaaatattatgtctaatgattatttcattccattccttaat 36915557  T
Q  235 ctgt 238  Q
    ||||    
T  36915558 ctgt 36915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 9022471 - 9022593
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaac-tttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    |||||||||| ||||| ||||||||||||||||| ||||||| ||||| ||||  |||||  |||  |||||||||||||||| |||| ||||||||||     
T  9022471 tccaacttttttctcacacaattttcaatgcaacttttaagtttgtctttttcatataaaacaagtgcagtttagtaaaagtgttatgtctaatgattaa 9022570  T
Q  217 ttgattcaattccttaatctgtg 239  Q
    || |||| |||  ||||||||||    
T  9022571 ttcattccattttttaatctgtg 9022593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 34168280 - 34168171
Alignment:
Q  126 ttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaa 225  Q
    |||||||| |||||||||||||||||||||||| |||||  |||| |||||||||||| | |||||||||| || |||| |   ||| || || ||||||    
T  34168280 ttctctcacacaattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgctatgacatttgactactttattcaa 34168181  T
Q  226 ttccttaatc 235  Q
    ||||||||||    
T  34168180 ttccttaatc 34168171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 14541820 - 14541744
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||  |||||||||||||||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  14541820 caacttttctctctcacaattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaa 14541744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 2067778 - 2067894
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    ||||||||| |||| |||||||| ||||||||||||| |  |||| || || ||||||||||| ||||||| |||||| | |||  | |||||||||||     
T  2067778 caacttttcactcacacaatttttaatgcaactttaatttggtcttttccttataaagtaagggcagtttaataaaagcgttatatcaaatgattatttc 2067877  T
Q  220 attcaattccttaatct 236  Q
    |||| ||| ||||||||    
T  2067878 attccatttcttaatct 2067894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 11336107 - 11336047
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaa 180  Q
    |||||||||||||| |||||||||||||||||||||| | ||||| ||||| |||||||||    
T  11336107 caacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 11336047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 16209019 - 16209103
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatg 204  Q
    |||||||||||||| | |||||||||||||||||||||| ||||| ||||  ||||| ||||| ||| ||| |||||||| ||||    
T  16209019 caacttttctctcacataattttcaatgcaactttaagtttgtctttttcctataaaataaggacagattaataaaagtgttatg 16209103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 22601134 - 22601178
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  22601134 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 22601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 34461737 - 34461695
Alignment:
Q  66 gtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaa 34461695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 39970404 - 39970492
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||||||||||  |||||||||||||||||||||||| ||||| |||||          || ||||||||||||||||||||| |||||||||||||    
T  39970404 aacttttctctcgcacaattttcaatgcaactttaagtttgtctttttct---------tgggcagtttagtaaaagtggtatgtctaatgattattt 39970492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 2812817 - 2812968
Alignment:
Q  73 aatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaa 172  Q
    |||||||||  |||||||||||||||||| ||||||       || | ||||||||||||  |||||||||||||||| ||||||| | ||| |||||      
T  2812817 aatgaatgttgctttacatttccaatacaactttaatttttttctcctaacttttctctcgcacaattttcaatgcaa-tttaagtttttctttttctt- 2812914  T
Q  173 taaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
            || |||||||||||||||| |||| ||||||||||||| |||||||| ||||||    
T  2812915 --------gggcagtttagtaaaagtgttatgtctaatgattatttcattcaattacttaat 2812968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 8382554 - 8382502
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||| |||||    
T  8382554 tccaacttttctctcacacaattttcaatgcaactataagtttgtctttttct 8382502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 14541900 - 14541856
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  14541900 ttgtttcaaaatgaatgtcactttacatttctaatacaactttaa 14541856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 27109975 - 27109931
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  27109975 ttgtttcaaaatgaatgtcactttccatttccaatacaactttaa 27109931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 27416502 - 27416542
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagcttta 107  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27416502 tttcaaaatgaatgtcactttacatttccaatacaacttta 27416542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 32737843 - 32737961
Alignment:
Q  119 ccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagt-aaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||||||||| ||| | |||||||||||||| ||||||| | ||| ||||| ||||||| |||| |||||||  ||||||| |||  ||||||| ||||    
T  32737843 ccaacttttctttcatataattttcaatgcaa-tttaagtttttctttttcttataaagtaaagggcagtttaacaaaagtgttatatctaatga-tatt 32737940  T
Q  218 tgattcaattccttaatctgt 238  Q
    | |||||||| ||||||||||    
T  32737941 tcattcaatttcttaatctgt 32737961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 36915365 - 36915409
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  36915365 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 36915409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 41414911 - 41415024
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||||| ||||| |||||||||||||||||||||||  | |   ||| | ||||| ||||| ||| |||||||||||| || | |||||||||||||     
T  41414911 caacttttttctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttc 41415009  T
Q  220 attcaattccttaat 234  Q
    |||  ||||||||||    
T  41415010 atttcattccttaat 41415024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 16208951 - 16208992
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  16208951 tttcaaaatgaatgtcactttacattttcaatacaactttaa 16208992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 26439045 - 26439082
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagt 158  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26439045 aacttttctctcacacaattttcaatgcaactttaagt 26439082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 27416596 - 27416657
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| | ||||| ||||| ||||| |||||||||||| | ||||||||||    
T  27416596 acaattttcaatgcaattctaagtttgtctttttcttataaagtaaggttattttagtaaaa 27416657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 39970323 - 39970360
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||||||||||||||| |||||||||||||||||||    
T  39970323 ttgtttcaaaatgaatgttactttacatttccaataca 39970360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 156239 - 156283
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||    
T  156239 ttgtttcaaaatgaatgtcactttacattcccaatataactttaa 156283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 9022393 - 9022437
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||    
T  9022393 ttgttttaaaatgaatgtcactttacgtttccaatacaactttaa 9022437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 34461660 - 34461537
Alignment:
Q  118 tccaacttttct--ctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgatta 215  Q
    ||||||||||||  |||| |||||||||||||||||||||||| |||||  |||   ||||||||| | | |||||||||| || |||| |   ||| ||    
T  34461660 tccaacttttctgtctcacacaattttcaatgcaactttaagtttgtcttgttcatgtaaagtaagattattttagtaaaattgttatgacatttgacta 34461561  T
Q  216 tttgattcaattccttaatctgtg 239  Q
    ||| |||  |||||||||||||||    
T  34461560 ttttatttcattccttaatctgtg 34461537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 42710056 - 42709949
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaat 226  Q
    |||||| |||||||||||| |||||||||| | | ||| ||| |||||||||||||  ||||||||  |||||  ||| |||||||| |||| ||| |||    
T  42710056 tctctctaacaattttcaacgcaactttaattttatctttttttaataaagtaaggatagtttagt-caagtgtcatgtctaatgataattttatttaat 42709958  T
Q  227 tccttaatc 235  Q
    | |||||||    
T  42709957 ttcttaatc 42709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 32661384 - 32661427
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||    
T  32661384 aacttttctctcacacaattttcaatacaactttaagtttgtct 32661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 34168355 - 34168316
Alignment:
Q  69 tcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  34168355 tcaaaatgaatgtcactttacattttcaatacaactttaa 34168316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 29931314 - 29931236
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtg 199  Q
    ||||||||||||| | |||||||||||||||||||| | | ||| | ||| ||||| ||| | ||||||| ||||||||    
T  29931314 aacttttctctcacataattttcaatgcaactttaattttttctttctcttataaaataaaggcagtttaataaaagtg 29931236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 1774130 - 1774085
Alignment:
Q  135 acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaa 180  Q
    |||||||||||||||||||||| | ||||| ||||| |||||||||    
T  1774130 acaattttcaatgcaactttaattttgtctttttcttataaagtaa 1774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 2803392 - 2803355
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  2803392 ttgtttcaaaataaatgtcactttacattttcaataca 2803355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 7612496 - 7612533
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  7612496 ttgttttaaaatgaatgtcactttacattttcaataca 7612533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 8382625 - 8382588
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  8382625 aaaatgaatgtcactttacattttcaatacaactttaa 8382588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 11335840 - 11335869
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacattt 93  Q
    ||||||||||||||||||||||||||||||    
T  11335840 ttgtttcaaaatgaatgtcactttacattt 11335869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 24732079 - 24732144
Alignment:
Q  173 taaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgt 238  Q
    ||||||| || |||||||||||||||| |||  | ||||| ||||| |||||||| ||||||||||    
T  24732079 taaagtaggggcagtttagtaaaagtgttatatccaatgactatttcattcaatttcttaatctgt 24732144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 1774214 - 1774170
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||| ||||||||| ||||||| ||||||    
T  1774214 ttgttttaaaatgaatgtcaatttacattttcaatacaactttaa 1774170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 2803322 - 2803270
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    ||||||||||||||   |||||||||||| ||||||||||| ||||| |||||    
T  2803322 tccaacttttctcttgcacaattttcaattcaactttaagtttgtctttttct 2803270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 3095578 - 3095534
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    |||||||||||||  ||| |||||||||||||||||||| |||||    
T  3095578 caacttttctctcgcacacttttcaatgcaactttaagtttgtct 3095534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 5588517 - 5588426
Alignment:
Q  144 aatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatct 236  Q
    |||| |||||||||| ||||| ||||| ||||| | ||| ||||||||||||| || ||||  |||||||||||| |||  ||| ||||||||    
T  5588517 aatgtaactttaagtttgtctttttcttataaattgagg-cagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatct 5588426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 5588628 - 5588584
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||| ||||||||| ||||||||||||||||| ||||||    
T  5588628 ttgttttaaactgaatgtcaatttacatttccaatacaactttaa 5588584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 8107245 - 8107193
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||||||||| ||||||||||||  |||||||| | ||||| |||||    
T  8107245 tccaacttttctctcagacaattttcaatagaactttaaatttgtctttttct 8107193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 8471501 - 8471465
Alignment:
Q  16 tatactcccttcgtttcaaaatgaatgtcactttagc 52  Q
    |||||||||||||||||||||||| |||| |||||||    
T  8471501 tatactcccttcgtttcaaaatgagtgtcgctttagc 8471465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 11257540 - 11257584
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||||||||||||||  |||||| ||||||    
T  11257540 ttgttttaaaatgaatgtcactttacatttttaatacaactttaa 11257584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 29931386 - 29931342
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||| ||| ||||||||||||||||||||| ||||||    
T  29931386 ttgttttaaaataaatatcactttacatttccaatacaactttaa 29931342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 34461747 - 34461715
Alignment:
Q  18 tactcccttcgtttcaaaatgaatgtcacttta 50  Q
    |||||||| ||||||||||||||||||||||||    
T  34461747 tactccctccgtttcaaaatgaatgtcacttta 34461715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 35052469 - 35052513
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||  ||||||||||||||||| ||||||    
T  35052469 ttgttttaaaatgaatgtcgttttacatttccaatacaactttaa 35052513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 45187439 - 45187395
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||| |||||||||||| |||| ||||||| ||||||    
T  45187439 ttgtttcaaaataaatgtcactttatattttcaatacaactttaa 45187395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 12154 - 12040
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttga 220  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||| |||| ||||||||||||| |    
T  12154 aacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagg-cagtttagtaaaagtgttatgtctaatgattatttca 12056  T
Q  221 ttcaattccttaatct 236  Q
    ||| ||||||||||||    
T  12055 ttccattccttaatct 12040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 12828755 - 12828636
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    |||||||||||||| |||||||||||||||||||||||  ||||| ||||| ||||||||||| |||||||||||||||| |||| |||||||||||||     
T  12828755 caacttttctctcacacaattttcaatgcaactttaagcttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttc 12828656  T
Q  220 attcaattccttaatctgtg 239  Q
    |||  |||| ||||| ||||    
T  12828655 atttcattcattaatttgtg 12828636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 29915618 - 29915740
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagt-aaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    |||||||||||||||| ||||||| ||||||||||||| || ||||| ||||| ||||||| || | |||||||||||||||| |||  ||||| |||||    
T  29915618 tccaacttttctctcacacaatttccaatgcaactttatgtttgtctttttcttataaagtaaatggcagtttagtaaaagtgttatttctaattattat 29915717  T
Q  217 ttgattcaattccttaatctgtg 239  Q
    || |||||||| |||||| ||||    
T  29915718 ttcattcaatttcttaatatgtg 29915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 29927284 - 29927405
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||||||||||||||   | |||||||||||||||||||| ||||| ||||| |||||||||||  |  |||||||||||| |||| ||||||||||||    
T  29927284 tccaacttttctctcatgtagttttcaatgcaactttaagtttgtctttttcttataaagtaaggatatgttagtaaaagtgttatgtctaatgattatt 29927383  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||| |||  ||||||||||    
T  29927384 tcattctattttttaatctgtg 29927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 31275717 - 31275596
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||| ||||  |||||  |||| |||||| ||||||||| || | |||||| |||||    
T  31275717 tccaacttttttctcacacaattttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttggtaaaagtgttacgtctaatggttatt 31275618  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||   ||||||||||||||    
T  31275617 tcatttctttccttaatctgtg 31275596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 26669174 - 26669096
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| | |||||||||||||||||||| | ||||| ||||| ||||||||||| || ||||||||||    
T  26669174 tccaacttttctctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaa 26669096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 10494838 - 10494760
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc-tgtttctaataaagtaaggtcagtttagtaaa 195  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||| | ||||| |||||||||||  |||||||||||    
T  10494838 tccaacttttctctcatacaattttcaatgcaacttaaagtttgtcttttttcttataaagtaagggtagtttagtaaa 10494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 29915539 - 29915583
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  29915539 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29915583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 29927205 - 29927249
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  29927205 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29927249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 31275796 - 31275752
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  31275796 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 31275752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 1924750 - 1924672
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| |||||||||||||||||||||| | ||| | || || ||||||||||   ||||||||||||    
T  1924750 tccaacttttctctcacacaattttcaatgcaactttaattttgtattttccttataaagtaagagaagtttagtaaaa 1924672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 17345201 - 17345132
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| ||||||||||||||||||| |||| |||||  |||| |||||||||||| | ||||||||||    
T  17345201 tctctcacacaattttcaatgcaacttgaagtttgtcttgttcttataaagtaaggttattttagtaaaa 17345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 12828835 - 12828791
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||    
T  12828835 ttgtttcaaaatgaatttcactttacatttccaatacaactttaa 12828791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 32258720 - 32258764
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  32258720 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 32258764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 23936658 - 23936538
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagt-aaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    |||||| |||||||||  ||||||||||||||||||||| | ||| | ||||| ||||||| |||| || || ||||||| || |||  |||||||||||    
T  23936658 tccaacctttctctca--caattttcaatgcaactttaaatttgtttttttcttataaagtaaagggcaattcagtaaaaatgttatatctaatgattat 23936561  T
Q  217 ttgattcaattccttaatctgtg 239  Q
    || |||| ||| |||||| ||||    
T  23936560 ttcattccatttcttaatatgtg 23936538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 30627170 - 30627205
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaa 156  Q
    ||||||||||||||||||||||||||||||||||||    
T  30627170 aacttttctctcaaacaattttcaatgcaactttaa 30627205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 34439567 - 34439525
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagcttt 106  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  34439567 ttgtttcaaaatgaatgtcattttacatttccaatacaacttt 34439525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 25932713 - 25932785
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaagtgtgtc-tgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||| ||||||||||||| |||||||||| |||| |||| || |||||||||||| | ||||||||||    
T  25932713 ttttctctcacacaattttcaatgtaactttaagtttgtcttgttgct-ataaagtaaggttattttagtaaaa 25932785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 34576631 - 34576700
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| |||||  ||||  |||||||| || | ||||||||||    
T  34576631 tctctcacacaattttcaatgcaactttaagtttgtcttgttcttgtaaagtaaagttattttagtaaaa 34576700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 4124009 - 4123965
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||    
T  4124009 ttgtttcaaaatgaatgtcactttacatttttaatacaactttaa 4123965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 6140555 - 6140642
Alignment:
Q  18 tactcccttcgtttcaaaatgaatgtcactttagcnnnnnnnnnnnttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||||||||           |||||| |||||||||||| ||||||||||||||| || ||||||    
T  6140555 tactccgttcgtttcaaaatgaatgtcactttagc---caaaaaagttgttttaaaatgaatgtcgctttacatttccaattcaactttaa 6140642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 6143039 - 6143126
Alignment:
Q  18 tactcccttcgtttcaaaatgaatgtcactttagcnnnnnnnnnnnttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||||||||           |||||| ||||||||||||| |||||||||||||| || ||||||    
T  6143039 tactccgttcgtttcaaaatgaatgtcactttagc---caaaaaaattgttttaaaatgaatgtcattttacatttccaattcaactttaa 6143126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 11785255 - 11785212
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||    
T  11785255 ttgtttcaaaatga-tgtcactttacatttccaatacaactttaa 11785212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 3015919 - 3015958
Alignment:
Q  69 tcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||| ||||||| ||||||    
T  3015919 tcaaaatgaatgtcactttacattttcaatacaactttaa 3015958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 26669247 - 26669208
Alignment:
Q  69 tcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  26669247 tcaaaatgaatgtcactttatatttccaatacaactttaa 26669208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 94
Target Start/End: Original strand, 19416857 - 19416887
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttc 94  Q
    |||||||||||||||||||||||||||||||    
T  19416857 ttgtttcaaaatgaatgtcactttacatttc 19416887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 6992508 - 6992557
Alignment:
Q  147 gcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||| ||||| ||||| |||||||||||| | ||||||||||    
T  6992508 gcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaa 6992557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 1924818 - 1924774
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||| ||||||||| ||||||| ||||||    
T  1924818 ttgttttaaaatgaatgtcattttacattttcaatacaactttaa 1924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 4132129 - 4132085
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||||||||||||||  |||||| ||||||    
T  4132129 ttgttttaaaatgaatgtcactttacatttttaatacaactttaa 4132085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 8052343 - 8052387
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||||||||| ||||| |||||| ||||||    
T  8052343 ttgttttaaaatgaatgtcactttatatttctaatacaactttaa 8052387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 10494916 - 10494872
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||| |||||||||||||| || ||||||    
T  10494916 ttgttttaaaatgaatgtcagtttacatttccaattcaactttaa 10494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 17345290 - 17345246
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||| |||||||||||||| |||||| ||||||    
T  17345290 ttgttttaaaatgaatatcactttacatttctaatacaactttaa 17345246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 30627089 - 30627133
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||| |||||||||||| |||| ||||||| ||||||    
T  30627089 ttgtttcaaaataaatgtcactttatattttcaatacaactttaa 30627133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 32258806 - 32258838
Alignment:
Q  124 ttttctctcaaacaattttcaatgcaactttaa 156  Q
    |||||||||| ||||||||||||||||||||||    
T  32258806 ttttctctcacacaattttcaatgcaactttaa 32258838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 34439480 - 34439384
Alignment:
Q  123 cttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagt-aaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||||||| | ||||||| ||||||||||||| || ||||| ||||| ||||| | |||| || |||| ||||| || |||  |||||||||||||    
T  34439480 cttttctcttacacaatttccaatgcaactttatgtttgtctttttcttataaaataaagggcaatttaataaaaatgttatatctaatgattattt 34439384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 34576542 - 34576586
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||| ||| ||||||||||||||||| ||||||    
T  34576542 ttgttttaaaatgaatatcattttacatttccaatacaactttaa 34576586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 12167736 - 12167565
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaa-ttttcaatgcaactttaagtgtgt 162  Q
    |||||| ||||||||||||||| ||||||| ||||||| |||||          |||||||||||||||| |||| |||||||||||||||||||| ||     
T  12167736 ttgttttaaaatgaatgtcactctacattttcaatacaactttaccctc-----tccaacttttctctcacacaaattttcaatgcaactttaagtttga 12167642  T
Q  163 ctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    |  ||||| ||||||||||| |||||||||||||||| | || ||||||||||||| |||||||| |||||| ||||    
T  12167641 ccttttcttataaagtaagggcagtttagtaaaagtgttttgtctaatgattatttcattcaatttcttaatttgtg 12167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 31889741 - 31889870
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnnctt-ccaacttttctctcaaacaattttcaatgcaactttaagtgtgt 162  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||        || ||||||||||||||| |||||||||||||||||||||| | |||    
T  31889741 ttgtttcaaaataaatgtcactttacatttccaatacaactttaatttttttttttccaacttttctctcacacaattttcaatgcaactttaattttgt 31889840  T
Q  163 ctgtttctaataaagtaaggtcagtttagt 192  Q
    || ||||| ||||||||||| |||||||||    
T  31889841 ctttttcttataaagtaagggcagtttagt 31889870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 43257934 - 43257815
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||| ||||| |||| |||||||||||||     
T  43257934 caactgttttctcacacaattttcaatgcaactttaagtttgtctatttcttataaagtaagggcagtttagtataagtgttatgtctaatgattatttc 43257835  T
Q  220 attcaattccttaatctgtg 239  Q
    |||  |||| ||||||||||    
T  43257834 atttcattctttaatctgtg 43257815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 236
Target Start/End: Complemental strand, 4011790 - 4011618
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||| |||||||| |||||||||||||||| ||||| ||||||       |||||||||||| ||||| |||||||||||||||||||||| | | ||    
T  4011790 ttgttttaaaatgaacgtcactttacatttccgatacaactttaatttttttcttccaacttttttctcacacaattttcaatgcaactttaattttatc 4011691  T
Q  164 tgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatct 236  Q
    | ||||| ||||| ||||| || ||||| ||||  | |||  | |||||||||||||||| ||| ||||||||    
T  4011690 tttttcttataaaataagggcattttagaaaaaacgttatatccaatgattatttgattccatttcttaatct 4011618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 166725 - 166604
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||| ||||  ||||   |||| |||||||||||||||| |||  ||||||||||||    
T  166725 tccaacttttttctcacacaattttcaatgcaactttaagtttgtctttttcatataatacaagggcagtttagtaaaagtgttatttctaatgattatt 166626  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||||||||    
T  166625 tcatttcattccttaatctgtg 166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 14980193 - 14980006
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctc---aa---------acaattttcaatgcaac 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||       ||||||||||| | |||   ||         |||||||||||||||||    
T  14980193 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctctccaactttttctcacaattttcaatgcaac 14980094  T
Q  152 tttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    ||||| | ||||| ||||| ||||||||||| |||||| ||||||||| |||  | ||||||||||| |||| ||| |||||||||||    
T  14980093 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattccatttcttaatctgtg 14980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 234
Target Start/End: Complemental strand, 8961162 - 8960995
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnnct-tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctg 165  Q
    |||||||||| ||||||||||||| ||||||| || ||||||       || || ||||||||||||| |||||||||| ||||||||||| | | |||     
T  8961162 tttcaaaatggatgtcactttacaattccaatgcaactttaattttactctctcaaacttttctctcacacaattttcattgcaactttaaatttatctt 8961063  T
Q  166 tttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
    ||||| ||||| ||||  |||||||||||||||| |||| ||||||||||||| |||  ||||||||||    
T  8961062 tttcttataaaataaga-cagtttagtaaaagtgttatgtctaatgattattttattatattccttaat 8960995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 36660504 - 36660623
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||| |||||||||||  |||||||  || ||||||||||| ||||| ||||| ||||||||||| || ||||||||||||| |||| ||||||||||||    
T  36660504 tccagcttttctctca--caattttttatacaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatt 36660601  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||||||||    
T  36660602 tcatttcattccttaatctgtg 36660623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 36783432 - 36783553
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| ||||  |  |||||||| || |||||||||| || |||| ||||||||||||    
T  36783432 tccaacttttctctcacacaattttcaatgcaactttaaatttgtctttttcataacaagtaagggcaatttagtaaaaatgttatgtctaatgattatt 36783531  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  ||  |||||||||||    
T  36783532 tcatttcatctcttaatctgtg 36783553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 4751606 - 4751485
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| |||||||||||| ||||||||||| ||| | ||||  |||||  ||||   |||||||||||||| |||| ||||||||||||    
T  4751606 tccaacttttttctcacacaattttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctaatgattatt 4751507  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||| ||||    
T  4751506 tcatttcattccttaatatgtg 4751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 223
Target Start/End: Original strand, 39059882 - 39059987
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    ||||| |||| ||||| |||||||||||||||||||||||| ||| | ||||  |||||  ||||  ||||||||||||||| |||| ||||||||||||    
T  39059882 tccaaattttttctcatacaattttcaatgcaactttaagtttgtttttttcatataaaacaagggtagtttagtaaaagtgttatgtctaatgattatt 39059981  T
Q  218 tgattc 223  Q
    | ||||    
T  39059982 tcattc 39059987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 4967546 - 4967446
Alignment:
Q  139 ttttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgt 238  Q
    |||||||||||||||||| | ||||| ||| | ||||||||||| |||||||||||||| | |||  | ||||||||||| |||| ||| ||||||||||    
T  4967546 ttttcaatgcaactttaattttgtcttttttttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcattccatttcttaatctgt 4967447  T
Q  239 g 239  Q
    |    
T  4967446 g 4967446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 27652386 - 27652274
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaat 226  Q
    ||||||| |||||||||||||||||||||| | ||||| ||||| |||||||||||| | |||||||||| || |||| |   ||| ||||| |||| ||    
T  27652386 tctctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaaggttattttagtaaaattgttatgacatttgactattttattccat 27652287  T
Q  227 tccttaatctgtg 239  Q
    | |||||||||||    
T  27652286 ttcttaatctgtg 27652274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 41845433 - 41845344
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaannnnnnncttccaacttttctctcaaacaattttcaatgcaactttaa 156  Q
    ||||||||||||||||||||||||||| |||||||  |||||       ||| |||||||||| ||| ||||||||||||||||||||||    
T  41845433 tttcaaaatgaatgtcactttacattttcaatacaattttaatttttttctttcaacttttctatcacacaattttcaatgcaactttaa 41845344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 34171243 - 34171318
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||| | |||||||||||||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  34171243 aacttttctctcacagaattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaa 34171318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 34919847 - 34919933
Alignment:
Q  153 ttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    |||||| ||||| ||||| ||||||||||| ||||||||||||| || |||| | ||||||||||| |||  |||||||||||||||    
T  34919847 ttaagtttgtctttttcttataaagtaagggcagtttagtaaaattgctatgtccaatgattattttatttcattccttaatctgtg 34919933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 793671 - 793602
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  793671 tctctcacacaattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaa 793602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 4742342 - 4742221
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||| ||||| |||||||||||| ||||||||||| ||| | ||||  |||||  ||||   |||||||||||||| |||| || |||||||||    
T  4742342 tccaacttttttctcacacaattttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctgatgattatt 4742243  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  |||||||||| ||||    
T  4742242 tcatttcattccttaatatgtg 4742221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 33822568 - 33822499
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  33822568 tctctcacacaattttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaa 33822499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 42329611 - 42329542
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||||||||||||||| |||||  |||| |||||||||||| | ||||||||||    
T  42329611 tctctcacacaattttcaatgcaactttaagtttgtcttattcttataaagtaaggttattttagtaaaa 42329542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 166803 - 166759
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  166803 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 166759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 793760 - 793716
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  793760 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 793716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 36660382 - 36660470
Alignment:
Q  18 tactcccttcgtttcaaaatgaatgtcactttagcnnnnnnnnnnnttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||| ||||||||||||           |||||||||||||||||||||||||||||| ||||||| ||||||    
T  36660382 tactcccttcgtttcaaaatgagtgtcactttagccaaaaaaaa--ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 36660470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 42329700 - 42329656
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  42329700 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 42329656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 7388264 - 7388168
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    ||||||||||||||  ||||||||||||||||||||| | | ||| ||||| ||||| ||||| || |||||||||| |  |||| |||||||||||||    
T  7388264 caacttttctctca--caattttcaatgcaactttaaatttatctttttcttataaaataaggacaatttagtaaaaatattatgtctaatgattattt 7388168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 15400251 - 15400370
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagt-aaggtcagtttagtaaaagtggtatggctaatgattatttg 219  Q
    ||||||||||||| ||||||| ||||| |||||||||| |  || ||||| ||||||| ||||  | ||||||||||||| |||  ||||| |||||||     
T  15400251 aacttttctctcatacaatttccaatgaaactttaagttttcctttttcttataaagtaaagggaattttagtaaaagtgttatatctaataattatttc 15400350  T
Q  220 attcaattccttaatctgtg 239  Q
    ||||||||  ||||||||||    
T  15400351 attcaattttttaatctgtg 15400370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 16886153 - 16886267
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatt 217  Q
    |||||||||||| ||| ||||||||||||||||||||||||       ||| | ||||||||||| |||||||||||| ||| || | ||||| ||||||    
T  16886153 tccaacttttctatcacacaattttcaatgcaactttaagt-------tttgttataaagtaagggcagtttagtaaatgtgttacgtctaataattatt 16886245  T
Q  218 tgattcaattccttaatctgtg 239  Q
    | |||  ||||||| |||||||    
T  16886246 tcatttcattccttgatctgtg 16886267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 31557409 - 31557355
Alignment:
Q  126 ttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaa 180  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  31557409 ttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaa 31557355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 4371362 - 4371406
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||    
T  4371362 ttgtttcaaaatgaacgtcactttacatttccaatacaactttaa 4371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 13066712 - 13066756
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||    
T  13066712 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaa 13066756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 27658726 - 27658682
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  27658726 ttgtttcaaaatgaatgtcactttacatttccaatataactttaa 27658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 27810345 - 27810389
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 27810389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 4371493 - 4371548
Alignment:
Q  184 cagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    |||||||||||||||| |||| ||||||||||||| |||| |||||||||| ||||    
T  4371493 cagtttagtaaaagtgctatgtctaatgattatttcattccattccttaatttgtg 4371548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 4751731 - 4751641
Alignment:
Q  18 tactcccttcgtttcaaaatgaatgtcactttagcnnnnnnnnnnnttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||| ||||||||||||| |||| |||||||           ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  4751731 tactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaataattgtttcaaaatgaatgtcactttatatttctaatacaactttaa 4751641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 15400177 - 15400214
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaactttaa 15400214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 32690882 - 32690841
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||| |||||| ||||||    
T  32690882 tttcaaaatgaatgtcactttacatttcaaatacaactttaa 32690841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 33585051 - 33584971
Alignment:
Q  118 tccaacttttct--ctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||||||||  |||| |||||||||||||||||||||||| |||||  |||   ||||||||||| | ||||||||||    
T  33585051 tccaacttttctgtctcacacaattttcaatgcaactttaagtttgtcttgttcatgtaaagtaaggttattttagtaaaa 33584971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 36296210 - 36296130
Alignment:
Q  118 tccaacttttctc--tcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||  ||| |||||||||||||||||||||||| |||||  |||  ||||| |||||| | ||||||||||    
T  36296210 tccaacttttctcgctcacacaattttcaatgcaactttaagtttgtcttgttcctataaattaaggttattttagtaaaa 36296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 38982218 - 38982169
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    ||||||||||||  |||||||||||||||||||||||| ||||| |||||    
T  38982218 aacttttctctcgcacaattttcaatgcaactttaagtttgtctttttct 38982169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 4742421 - 4742377
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  4742421 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaa 4742377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 12992063 - 12992107
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||    
T  12992063 ttgtttcaaaatgaatgtcattttacatttctaatacaactttaa 12992107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 28640161 - 28640205
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtct 164  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||    
T  28640161 caacttttctctcgaacaattttcaatacaactttaagtttgtct 28640205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 29044799 - 29044875
Alignment:
Q  121 aacttttctctcaa-acaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||| | |||||||||||||||||||||||| | |||  |||| |||||||||| | | ||||||||||    
T  29044799 aacttttctctccacacaattttcaatgcaactttaagtttatcttattcttataaagtaagattattttagtaaaa 29044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 29653668 - 29653624
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||    
T  29653668 ttgttgcaaaatgaatgtcattttacatttccaatacaactttaa 29653624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 31557489 - 31557445
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  31557489 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaa 31557445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 33822653 - 33822613
Alignment:
Q  68 ttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  33822653 ttcaaaatgaatgtcactttacattttcaatacaactttaa 33822613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 34171163 - 34171207
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  34171163 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 34171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 38982299 - 38982255
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||    
T  38982299 ttgttttaaaatgaatgtcactttatatttccaatacaactttaa 38982255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 32963161 - 32963118
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagcttta 107  Q
    ||||||||||||||||  |||||||||||||||||||| |||||    
T  32963161 ttgtttcaaaatgaataccactttacatttccaatacaacttta 32963118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 12992196 - 12992246
Alignment:
Q  184 cagtttagtaaaagtggtatggctaatgattatttgattcaattccttaat 234  Q
    |||||||||||||||| |||| ||||||||||||| |||  ||||||||||    
T  12992196 cagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaat 12992246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 32690805 - 32690755
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||||||  ||||||||||||||||||||| || ||||| |||||    
T  32690805 caacttttctctcgcacaattttcaatgcaactttaggtttgtctttttct 32690755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 33693810 - 33693907
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattattt 218  Q
    |||||||| ||||| |||||||||||||||||||||||  | |   ||| | ||||| ||||| ||| |||||||||||| || | |||||||||||||    
T  33693810 caacttttttctcacacaattttcaatgcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattattt 33693907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 154
Target Start/End: Original strand, 4371443 - 4371476
Alignment:
Q  121 aacttttctctcaaacaattttcaatgcaacttt 154  Q
    ||||||||||||| ||||||||||||||||||||    
T  4371443 aacttttctctcacacaattttcaatgcaacttt 4371476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Complemental strand, 24436614 - 24436585
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacattt 93  Q
    ||||||||||||||||||||||||||||||    
T  24436614 ttgtttcaaaatgaatgtcactttacattt 24436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 29653579 - 29653510
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||  ||||||||||||||| |||||  |||| ||||||||| || | ||||||||||    
T  29653579 tctctcacacaatttctaatgcaactttaagtttgtcttgttcttataaagtaacgttattttagtaaaa 29653510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 41566861 - 41566906
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc 163  Q
    |||||||||||||||  | |||||||||||||||||||||| ||||    
T  41566861 tccaacttttctctcgtataattttcaatgcaactttaagtttgtc 41566906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 43257998 - 43257961
Alignment:
Q  71 aaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  43257998 aaaatgaatgtcactttacatttccaatataactttaa 43257961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 17674207 - 17674251
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||| ||| ||||| | ||||||    
T  17674207 ttgtttcaaaatgaatgtcactttacgttttcaataaaactttaa 17674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 33585129 - 33585085
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||| |||||||||||||| ||||||| ||||||    
T  33585129 ttgttttaaaatgaacgtcactttacattttcaatacaactttaa 33585085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 92
Target Start/End: Original strand, 34919752 - 34919780
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatt 92  Q
    |||||||||||||||||||||||||||||    
T  34919752 ttgtttcaaaatgaatgtcactttacatt 34919780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 39059805 - 39059849
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||||    
T  39059805 ttgtttcaaaatgaatgttgctttacattttcaatacaactttaa 39059849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 1619 - 1697
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||||||||||||| | |||||||||||||||||||| | ||||| ||||| ||||||||||| || ||||||||||    
T  1619 tccaacttttctctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaa 1697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 1546 - 1585
Alignment:
Q  69 tcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  1546 tcaaaatgaatgtcactttatatttccaatacaactttaa 1585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 227
Target Start/End: Complemental strand, 16116 - 16007
Alignment:
Q  117 ttccaacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||  ||| | ||||||||| |  |||||||||||| || |||   ||||||||||    
T  16116 ttccaacctttctctcacacaattttcaatgcaactttaagtttgtc-attttttataaagtaaaggtagtttagtaaaaatgttatatataatgattat 16018  T
Q  217 ttgattcaatt 227  Q
    || ||| ||||    
T  16017 ttcatttaatt 16007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 70520 - 70451
Alignment:
Q  127 tctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    ||||||| |||||||||||| ||||||||||| ||| | ||||| |||||||||||| | ||||||||||    
T  70520 tctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaa 70451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 70609 - 70565
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||||||||||||| |||| || ||||||    
T  70609 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaa 70565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 4185 - 4063
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaagtgtgtc-tgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattat 216  Q
    |||||||||||||||| | ||||||||||  |||||||||| |||| | ||| | ||||||||||| || ||| |||||| || ||||  |||||||| |    
T  4185 tccaacttttctctcacataattttcaatcaaactttaagtttgtcattttttttataaagtaaggacaatttcgtaaaaatgttatgtataatgattgt 4086  T
Q  217 ttgattcaattccttaatctgtg 239  Q
    || |||| ||| |||||| ||||    
T  4085 ttcattccatttcttaatatgtg 4063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 7774 - 7736
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagt 158  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7774 caacttttctctcacacaattttcaatgcaactttaagt 7736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 1692 - 1768
Alignment:
Q  160 tgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatct 236  Q
    ||||| ||||| ||||||||||||||||||||||||| || |||  | ||||||||||| |||  ||| ||||||||    
T  1692 tgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatct 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 9431 - 9507
Alignment:
Q  160 tgtctgtttctaataaagtaaggtcagtttagtaaaagtggtatggctaatgattatttgattcaattccttaatct 236  Q
    ||||| ||||| ||||||||||||||||||||||||| || |||  | ||||||||||| |||  ||| ||||||||    
T  9431 tgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatct 9507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 97
Target Start/End: Original strand, 1642 - 1672
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaa 97  Q
    |||||||||||||||||||||||||||||||    
T  1642 tttcaaaatgaatgtcactttacatttccaa 1672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 97
Target Start/End: Original strand, 9381 - 9411
Alignment:
Q  67 tttcaaaatgaatgtcactttacatttccaa 97  Q
    |||||||||||||||||||||||||||||||    
T  9381 tttcaaaatgaatgtcactttacatttccaa 9411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 8156 - 8200
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  8156 ttgtttcaaaatgaatgtcaatttacattttcaatacaactttaa 8200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 8236 - 8274
Alignment:
Q  118 tccaacttttctctcaaacaattttcaatgcaactttaa 156  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  8236 tccaacttttctctcacacaattttcaaagcaactttaa 8274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 13075 - 13023
Alignment:
Q  187 tttagtaaaagtggtatggctaatgattatttgattcaattccttaatctgtg 239  Q
    ||||||||||||| |||| ||||||||||||| |||  |||||||||||||||    
T  13075 tttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtg 13023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 13213 - 13176
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaataca 101  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  13213 ttgttttaaaatgaacgtcactttacatttccaataca 13176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 321724 - 321768
Alignment:
Q  64 ttgtttcaaaatgaatgtcactttacatttccaatacagctttaa 108  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||    
T  321724 ttgttttaaaatgaatgtcgctttacatttccaatacaactttaa 321768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 321814 - 321882
Alignment:
Q  128 ctctcaaacaattttcaatgcaactttaagtgtgtctgtttctaataaagtaaggtcagtttagtaaaa 196  Q
    |||||| |||||||||||||||| ||||||| |||||  |||  |||||||||||| | ||||||||||    
T  321814 ctctcacacaattttcaatgcaattttaagtttgtcttgttcctataaagtaaggttattttagtaaaa 321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 158178 - 158228
Alignment:
Q  120 caacttttctctcaaacaattttcaatgcaactttaagtgtgtctgtttct 170  Q
    |||||||||||||  | |||||||||||||||||||||| ||||| |||||    
T  158178 caacttttctctcgcataattttcaatgcaactttaagtttgtctttttct 158228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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