View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16056_low_54 (Length: 247)
Name: NF16056_low_54
Description: NF16056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16056_low_54 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 54413164 - 54413350
Alignment:
| Q |
1 |
ttatacaatattaaggcgttatagtatacattacacagaaagtaacgttgtataattccgtataagaaatatcatattttacatttaatttactttttgg |
100 |
Q |
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| T |
54413164 |
ttatacaatatcaaggcgttatagtatacattacacagaaagtaacgttgtataattccgtataagaaatatcatattttacatttaatttactttttgg |
54413263 |
T |
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| Q |
101 |
aagacattgaatttacttttgtcgaccttgggctatcgttaatcaaactgagcattatattggaatatttttagtttggcataccta |
187 |
Q |
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| T |
54413264 |
aagacattgaatttacttttgtcgaccttgggctatcgttaatcaaactgagcattatattggaatatttttagtttggcataccta |
54413350 |
T |
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