View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16057_low_2 (Length: 416)

Name: NF16057_low_2
Description: NF16057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16057_low_2
NF16057_low_2
[»] chr2 (46 HSPs)
chr2 (5-413)||(13266532-13266943)
chr2 (282-413)||(10582015-10582145)
chr2 (268-397)||(15038017-15038147)
chr2 (268-413)||(33827582-33827728)
chr2 (268-413)||(35171842-35171988)
chr2 (268-413)||(44946062-44946208)
chr2 (260-413)||(17324808-17324960)
chr2 (282-413)||(24196046-24196176)
chr2 (268-382)||(28668946-28669061)
chr2 (268-406)||(30466839-30466978)
chr2 (268-413)||(36242321-36242467)
chr2 (268-413)||(43374339-43374480)
chr2 (260-394)||(3943801-3943936)
chr2 (268-413)||(11941219-11941365)
chr2 (260-413)||(34516415-34516563)
chr2 (268-397)||(36390578-36390707)
chr2 (282-413)||(44976176-44976309)
chr2 (260-413)||(41314034-41314187)
chr2 (268-406)||(25293215-25293347)
chr2 (268-407)||(45271432-45271572)
chr2 (264-362)||(4769259-4769358)
chr2 (268-397)||(5394075-5394205)
chr2 (327-413)||(27290630-27290716)
chr2 (268-407)||(2140495-2140632)
chr2 (324-413)||(4567503-4567592)
chr2 (268-397)||(8192361-8192490)
chr2 (268-413)||(41329885-41330030)
chr2 (272-367)||(19849921-19850017)
chr2 (328-413)||(1191555-1191640)
chr2 (268-370)||(19054110-19054214)
chr2 (313-363)||(19517034-19517085)
chr2 (268-397)||(8258955-8259085)
chr2 (268-322)||(18976464-18976518)
chr2 (352-402)||(32845144-32845194)
chr2 (328-413)||(5608104-5608189)
chr2 (313-397)||(23787062-23787147)
chr2 (260-320)||(19605847-19605907)
chr2 (266-332)||(8024677-8024744)
chr2 (268-397)||(19174821-19174950)
chr2 (329-362)||(1845725-1845758)
chr2 (268-321)||(14486960-14487013)
chr2 (328-404)||(14946830-14946907)
chr2 (351-404)||(28194227-28194279)
chr2 (275-355)||(44610139-44610220)
chr2 (260-336)||(4852649-4852725)
chr2 (268-320)||(18692096-18692148)
[»] chr1 (46 HSPs)
chr1 (268-413)||(15059411-15059557)
chr1 (268-413)||(4621246-4621392)
chr1 (260-413)||(9500356-9500510)
chr1 (268-413)||(24122065-24122211)
chr1 (268-413)||(24674435-24674581)
chr1 (260-413)||(7766728-7766882)
chr1 (268-412)||(7578452-7578597)
chr1 (268-413)||(17935811-17935957)
chr1 (268-407)||(18646901-18647041)
chr1 (268-413)||(27454873-27455021)
chr1 (297-413)||(7946886-7947002)
chr1 (270-413)||(8077689-8077832)
chr1 (260-413)||(23734158-23734313)
chr1 (260-413)||(23741350-23741505)
chr1 (260-397)||(30677234-30677372)
chr1 (268-413)||(36155897-36156043)
chr1 (260-397)||(46607868-46608006)
chr1 (268-395)||(1378958-1379085)
chr1 (268-406)||(45859052-45859191)
chr1 (268-413)||(7197256-7197401)
chr1 (268-409)||(8254761-8254903)
chr1 (268-397)||(32729603-32729732)
chr1 (272-361)||(40802082-40802171)
chr1 (272-397)||(16899561-16899687)
chr1 (260-413)||(18533725-18533879)
chr1 (293-407)||(23232295-23232414)
chr1 (326-416)||(32930788-32930878)
chr1 (268-397)||(37351462-37351600)
chr1 (268-357)||(1818807-1818896)
chr1 (325-382)||(45331689-45331746)
chr1 (268-413)||(34778384-34778527)
chr1 (322-413)||(33905574-33905665)
chr1 (327-397)||(168259-168329)
chr1 (268-413)||(2272386-2272532)
chr1 (268-397)||(16539666-16539795)
chr1 (268-376)||(8779745-8779854)
chr1 (268-397)||(40145890-40146025)
chr1 (349-413)||(46113493-46113557)
chr1 (272-355)||(26513161-26513244)
chr1 (260-336)||(27159205-27159281)
chr1 (260-339)||(48699875-48699955)
chr1 (285-339)||(3272943-3272997)
chr1 (327-413)||(21726771-21726857)
chr1 (268-306)||(23041672-23041710)
chr1 (284-397)||(29057363-29057476)
chr1 (268-404)||(31162801-31162938)
[»] chr3 (60 HSPs)
chr3 (268-407)||(18176896-18177036)
chr3 (268-413)||(52821645-52821790)
chr3 (260-393)||(53288714-53288847)
chr3 (268-413)||(25289724-25289869)
chr3 (268-397)||(40133458-40133588)
chr3 (268-413)||(15566509-15566654)
chr3 (274-413)||(35492953-35493093)
chr3 (268-413)||(8456159-8456305)
chr3 (268-413)||(39041861-39042007)
chr3 (268-413)||(49258271-49258417)
chr3 (268-413)||(53424186-53424331)
chr3 (268-413)||(30807162-30807308)
chr3 (268-394)||(32151485-32151612)
chr3 (268-413)||(46576390-46576536)
chr3 (268-397)||(48977446-48977576)
chr3 (268-397)||(10190751-10190881)
chr3 (268-413)||(25379803-25379949)
chr3 (268-413)||(26174155-26174301)
chr3 (268-397)||(30257682-30257812)
chr3 (260-413)||(31537839-31537993)
chr3 (288-413)||(40940867-40940993)
chr3 (268-397)||(53233920-53234049)
chr3 (268-394)||(45272425-45272552)
chr3 (260-397)||(2511298-2511436)
chr3 (268-397)||(8097288-8097418)
chr3 (268-397)||(10083828-10083958)
chr3 (268-413)||(21362985-21363131)
chr3 (268-413)||(45529764-45529909)
chr3 (324-413)||(26108334-26108423)
chr3 (277-413)||(29915288-29915424)
chr3 (277-413)||(29964441-29964577)
chr3 (268-361)||(24165724-24165817)
chr3 (268-395)||(33398477-33398605)
chr3 (268-409)||(24407307-24407449)
chr3 (268-413)||(34492584-34492730)
chr3 (268-413)||(52455658-52455804)
chr3 (313-397)||(7470270-7470354)
chr3 (268-413)||(8958044-8958191)
chr3 (260-369)||(17579136-17579247)
chr3 (268-359)||(54475777-54475869)
chr3 (284-397)||(49167114-49167231)
chr3 (344-413)||(55287845-55287914)
chr3 (268-340)||(55371303-55371376)
chr3 (313-392)||(1242036-1242116)
chr3 (268-397)||(1178230-1178358)
chr3 (268-346)||(39890615-39890693)
chr3 (268-413)||(1692876-1693021)
chr3 (268-397)||(7485540-7485664)
chr3 (268-347)||(48104985-48105065)
chr3 (268-385)||(11390672-11390790)
chr3 (272-397)||(25344071-25344196)
chr3 (269-346)||(33698716-33698794)
chr3 (276-397)||(34844436-34844557)
chr3 (268-397)||(48972723-48972850)
chr3 (314-395)||(4462693-4462774)
chr3 (268-306)||(4252405-4252443)
chr3 (268-322)||(53848443-53848497)
chr3 (342-395)||(51532849-51532902)
chr3 (268-320)||(50731246-50731298)
chr3 (268-320)||(50781556-50781608)
[»] chr8 (50 HSPs)
chr8 (268-413)||(4718691-4718837)
chr8 (260-413)||(39349302-39349456)
chr8 (269-413)||(15259416-15259561)
chr8 (268-413)||(34237664-34237810)
chr8 (268-413)||(19471655-19471802)
chr8 (268-413)||(19542579-19542726)
chr8 (268-413)||(19589970-19590117)
chr8 (268-397)||(8765535-8765665)
chr8 (268-413)||(21603276-21603422)
chr8 (268-413)||(28193520-28193666)
chr8 (268-413)||(42328050-42328196)
chr8 (269-413)||(2618232-2618377)
chr8 (268-394)||(20305973-20306100)
chr8 (268-394)||(21092606-21092733)
chr8 (268-397)||(3734632-3734762)
chr8 (268-397)||(264409-264538)
chr8 (268-397)||(651383-651512)
chr8 (268-397)||(837118-837247)
chr8 (260-413)||(14633000-14633154)
chr8 (272-397)||(6953021-6953146)
chr8 (268-397)||(34610696-34610826)
chr8 (268-413)||(42643127-42643273)
chr8 (268-412)||(32879326-32879471)
chr8 (266-397)||(27746342-27746474)
chr8 (282-397)||(25248411-25248525)
chr8 (268-413)||(4698732-4698878)
chr8 (267-407)||(28088338-28088479)
chr8 (272-404)||(28964088-28964220)
chr8 (260-397)||(24018444-24018583)
chr8 (268-413)||(20469963-20470108)
chr8 (285-404)||(3403528-3403648)
chr8 (301-413)||(18532153-18532266)
chr8 (268-346)||(2639420-2639499)
chr8 (272-406)||(10292108-10292242)
chr8 (192-246)||(3036545-3036599)
chr8 (328-413)||(9047348-9047433)
chr8 (300-404)||(24999289-24999394)
chr8 (271-402)||(28908880-28909012)
chr8 (272-379)||(26168862-26168969)
chr8 (268-404)||(36848759-36848895)
chr8 (195-246)||(3049117-3049168)
chr8 (64-107)||(11364692-11364735)
chr8 (326-404)||(24339691-24339769)
chr8 (272-404)||(18128568-18128701)
chr8 (328-397)||(21667612-21667681)
chr8 (282-397)||(2166761-2166874)
chr8 (195-246)||(29912128-29912179)
chr8 (198-244)||(15808741-15808787)
chr8 (330-399)||(26261844-26261913)
chr8 (268-340)||(7557960-7558032)
[»] chr6 (29 HSPs)
chr6 (268-408)||(3222645-3222785)
chr6 (260-413)||(11448913-11449067)
chr6 (268-413)||(654155-654301)
chr6 (268-413)||(9239017-9239163)
chr6 (268-397)||(15360107-15360237)
chr6 (268-397)||(34147404-34147534)
chr6 (268-397)||(34160020-34160150)
chr6 (268-406)||(28672116-28672255)
chr6 (268-412)||(1344978-1345123)
chr6 (268-413)||(11840943-11841088)
chr6 (268-409)||(21148520-21148661)
chr6 (282-413)||(12390467-12390599)
chr6 (268-413)||(21982330-21982475)
chr6 (268-407)||(9690647-9690787)
chr6 (260-406)||(9843987-9844134)
chr6 (268-397)||(11007223-11007353)
chr6 (268-406)||(5360080-5360219)
chr6 (272-391)||(17081067-17081187)
chr6 (326-397)||(12591695-12591766)
chr6 (268-397)||(17149465-17149595)
chr6 (273-397)||(9208310-9208435)
chr6 (268-338)||(14212999-14213070)
chr6 (264-336)||(33718474-33718547)
chr6 (285-391)||(33499539-33499646)
chr6 (266-325)||(8479428-8479487)
chr6 (77-131)||(6919383-6919437)
chr6 (351-413)||(13753282-13753344)
chr6 (197-246)||(6067581-6067630)
chr6 (353-413)||(14212934-14212994)
[»] scaffold0070 (1 HSPs)
scaffold0070 (268-413)||(40367-40512)
[»] chr7 (56 HSPs)
chr7 (260-397)||(21835213-21835351)
chr7 (268-413)||(22119934-22120080)
chr7 (268-413)||(40542919-40543065)
chr7 (268-413)||(7275323-7275469)
chr7 (268-397)||(654714-654843)
chr7 (268-395)||(17196959-17197087)
chr7 (268-406)||(11997902-11998041)
chr7 (268-397)||(2751333-2751463)
chr7 (268-413)||(7175871-7176017)
chr7 (268-413)||(22703532-22703678)
chr7 (268-408)||(29861721-29861862)
chr7 (268-397)||(28089878-28090011)
chr7 (268-395)||(31273978-31274105)
chr7 (268-397)||(18044169-18044299)
chr7 (268-413)||(17212099-17212245)
chr7 (268-413)||(28950917-28951063)
chr7 (277-413)||(10091234-10091371)
chr7 (282-413)||(2103101-2103232)
chr7 (268-413)||(21217842-21217988)
chr7 (268-385)||(23092170-23092288)
chr7 (260-413)||(39145653-39145807)
chr7 (268-397)||(41907523-41907652)
chr7 (268-407)||(27009411-27009552)
chr7 (268-413)||(27704048-27704193)
chr7 (268-407)||(23012517-23012657)
chr7 (268-394)||(2344364-2344491)
chr7 (268-413)||(16374040-16374186)
chr7 (268-376)||(3851840-3851949)
chr7 (260-385)||(33137826-33137951)
chr7 (268-395)||(43785308-43785436)
chr7 (268-397)||(23330748-23330878)
chr7 (268-397)||(22638354-22638480)
chr7 (260-376)||(31197673-31197790)
chr7 (268-406)||(27312205-27312344)
chr7 (268-362)||(31712911-31713006)
chr7 (58-117)||(42863660-42863719)
chr7 (311-413)||(14199719-14199821)
chr7 (331-397)||(42814926-42814992)
chr7 (6-107)||(32471190-32471295)
chr7 (326-413)||(7799900-7799987)
chr7 (324-395)||(9718053-9718124)
chr7 (298-380)||(21373789-21373872)
chr7 (260-406)||(22643343-22643490)
chr7 (260-397)||(28647031-28647169)
chr7 (272-390)||(9683895-9684014)
chr7 (330-397)||(13332495-13332562)
chr7 (268-406)||(19421284-19421423)
chr7 (324-379)||(36772369-36772424)
chr7 (268-382)||(42913522-42913637)
chr7 (271-404)||(37056269-37056394)
chr7 (268-358)||(8943410-8943502)
chr7 (332-399)||(8435769-8435836)
chr7 (198-246)||(24934737-24934785)
chr7 (328-391)||(6491675-6491738)
chr7 (268-309)||(21574111-21574152)
chr7 (84-136)||(39773225-39773277)
[»] chr4 (51 HSPs)
chr4 (268-413)||(27528804-27528950)
chr4 (268-397)||(34723857-34723987)
chr4 (268-413)||(34844767-34844913)
chr4 (268-406)||(40058861-40059000)
chr4 (268-413)||(52983661-52983807)
chr4 (265-397)||(9517647-9517780)
chr4 (268-413)||(49287900-49288045)
chr4 (260-413)||(33696280-33696434)
chr4 (260-397)||(20566408-20566546)
chr4 (268-397)||(5609211-5609341)
chr4 (268-413)||(32986239-32986385)
chr4 (268-397)||(45787713-45787843)
chr4 (324-413)||(33992668-33992757)
chr4 (268-397)||(25852272-25852403)
chr4 (268-395)||(44343574-44343702)
chr4 (268-413)||(20077993-20078139)
chr4 (272-397)||(32990493-32990619)
chr4 (268-413)||(19660541-19660687)
chr4 (268-397)||(54127351-54127481)
chr4 (268-394)||(13771491-13771619)
chr4 (328-416)||(32942409-32942497)
chr4 (268-413)||(46714434-46714581)
chr4 (268-397)||(18875526-18875655)
chr4 (260-376)||(22488029-22488146)
chr4 (272-385)||(55961767-55961880)
chr4 (268-413)||(35229210-35229356)
chr4 (282-397)||(36131533-36131649)
chr4 (268-397)||(25969512-25969639)
chr4 (324-397)||(35674807-35674880)
chr4 (268-397)||(51535671-51535809)
chr4 (327-413)||(12500127-12500213)
chr4 (342-416)||(22625154-22625228)
chr4 (328-413)||(2351055-2351140)
chr4 (260-404)||(28791166-28791310)
chr4 (268-413)||(30879175-30879320)
chr4 (324-395)||(13584320-13584391)
chr4 (260-397)||(21387488-21387624)
chr4 (268-335)||(52494609-52494676)
chr4 (268-402)||(4911975-4912114)
chr4 (260-319)||(7093508-7093567)
chr4 (272-390)||(13550273-13550392)
chr4 (311-413)||(13873347-13873450)
chr4 (273-412)||(20527048-20527187)
chr4 (268-377)||(27574396-27574506)
chr4 (272-395)||(34835589-34835713)
chr4 (351-413)||(43719158-43719220)
chr4 (282-349)||(4585736-4585802)
chr4 (331-397)||(7392037-7392102)
chr4 (268-306)||(12824550-12824588)
chr4 (216-246)||(44369014-44369044)
chr4 (266-311)||(13781131-13781176)
[»] chr5 (49 HSPs)
chr5 (268-413)||(19456220-19456364)
chr5 (268-413)||(38684250-38684395)
chr5 (268-413)||(11926510-11926657)
chr5 (268-406)||(27498740-27498879)
chr5 (268-397)||(11464917-11465046)
chr5 (260-397)||(6014281-6014419)
chr5 (268-413)||(8484670-8484816)
chr5 (268-413)||(30485870-30486016)
chr5 (268-397)||(32059449-32059579)
chr5 (268-413)||(15641115-15641260)
chr5 (268-413)||(18207249-18207395)
chr5 (268-382)||(27487563-27487679)
chr5 (268-395)||(31287955-31288083)
chr5 (260-390)||(5049202-5049332)
chr5 (268-413)||(7085635-7085781)
chr5 (260-397)||(10869566-10869704)
chr5 (268-413)||(34310184-34310330)
chr5 (268-395)||(4603837-4603965)
chr5 (268-385)||(35425083-35425201)
chr5 (268-413)||(33709512-33709656)
chr5 (268-413)||(13038464-13038609)
chr5 (260-379)||(23270523-23270643)
chr5 (268-413)||(37495089-37495242)
chr5 (330-413)||(25586974-25587057)
chr5 (264-407)||(42193533-42193675)
chr5 (313-397)||(15931117-15931201)
chr5 (268-396)||(19145421-19145549)
chr5 (260-396)||(26009265-26009402)
chr5 (268-349)||(41351113-41351194)
chr5 (268-397)||(13108459-13108588)
chr5 (288-413)||(15971151-15971277)
chr5 (268-413)||(21236371-21236517)
chr5 (268-384)||(25750622-25750735)
chr5 (268-397)||(12398457-12398587)
chr5 (268-376)||(9659320-9659429)
chr5 (273-410)||(10399818-10399957)
chr5 (268-397)||(24158175-24158305)
chr5 (268-406)||(36954867-36955006)
chr5 (260-382)||(930487-930608)
chr5 (268-322)||(7151437-7151491)
chr5 (268-336)||(22693054-22693123)
chr5 (324-369)||(34049897-34049942)
chr5 (297-397)||(41568907-41569007)
chr5 (268-362)||(13659254-13659349)
chr5 (77-132)||(34272303-34272358)
chr5 (351-413)||(38631054-38631116)
chr5 (344-413)||(1827616-1827685)
chr5 (268-332)||(21377258-21377323)
chr5 (268-347)||(22392796-22392876)
[»] scaffold0576 (1 HSPs)
scaffold0576 (268-397)||(5091-5221)
[»] scaffold0217 (1 HSPs)
scaffold0217 (260-397)||(7310-7448)
[»] scaffold0019 (1 HSPs)
scaffold0019 (268-413)||(161851-161997)
[»] scaffold0623 (1 HSPs)
scaffold0623 (268-413)||(1066-1211)
[»] scaffold0366 (2 HSPs)
scaffold0366 (268-413)||(9309-9454)
scaffold0366 (285-413)||(12027-12155)
[»] scaffold0102 (1 HSPs)
scaffold0102 (268-413)||(39134-39280)
[»] scaffold0459 (1 HSPs)
scaffold0459 (268-413)||(10704-10848)
[»] scaffold0068 (1 HSPs)
scaffold0068 (268-413)||(41654-41799)
[»] scaffold0051 (1 HSPs)
scaffold0051 (268-413)||(52880-53026)
[»] scaffold0016 (1 HSPs)
scaffold0016 (268-397)||(32346-32475)
[»] scaffold0026 (1 HSPs)
scaffold0026 (284-397)||(97391-97505)
[»] scaffold1175 (1 HSPs)
scaffold1175 (268-363)||(2435-2531)
[»] scaffold0328 (2 HSPs)
scaffold0328 (260-413)||(15033-15186)
scaffold0328 (268-396)||(13056-13182)
[»] scaffold0157 (1 HSPs)
scaffold0157 (327-413)||(20264-20350)
[»] scaffold0049 (1 HSPs)
scaffold0049 (268-348)||(66861-66942)
[»] scaffold0717 (1 HSPs)
scaffold0717 (324-407)||(24-107)
[»] scaffold0171 (1 HSPs)
scaffold0171 (260-340)||(11421-11502)


Alignment Details
Target: chr2 (Bit Score: 289; Significance: 1e-162; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 5 - 413
Target Start/End: Complemental strand, 13266943 - 13266532
Alignment:
Q  5 ggagtagcaaagggagagaggagagacttcaccaatattcttcctatcccttaagtgtccatcattcctctgtttatgcacaatccaagcttccttaatt 104  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13266943 ggagtaccaaagggagagaggagagacttcaccaatattcttcctatcccttaagtgtccatcattcctctatttatgcacaatccaagcttccttaatt 13266844  T
Q  105 ttaaaattactagtcacatgtccatttatctcgactataatattacgtcaaatgtgtatttcttcatatgttatgtcaaatcataatagacacttgataa 204  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13266843 ttaaaattactagccacatgtccatttatctcgactataaaattacgtcaagtgtgtatttcttcatatgttatgtcaaatcataatagacacttgataa 13266744  T
Q  205 gaagtttagagtatcaactttatcttaaaaattgtgtattcacc---nnnnnnnnnnnaaacttgatatccgatccaaggatcgactaattcgatgggac 301  Q
    |||||||| |||||||||||||||||||||||||||||||||||              ||||| ||||||||||||||| ||||||||||| || |||||    
T  13266743 gaagtttaaagtatcaactttatcttaaaaattgtgtattcaccttttttttttaaaaaaactcgatatccgatccaagaatcgactaatttgaggggac 13266644  T
Q  302 caatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaa 401  Q
    ||||| ||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | | |    
T  13266643 caatcccattacccacttgcggggccccgtttaaagccagagcaagctctgtatggacttagtccaccggaattggcaccagagtgaatcgaacatgaga 13266544  T
Q  402 cctctgaaggag 413  Q
    ||||| ||||||    
T  13266543 cctctaaaggag 13266532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 282 - 413
Target Start/End: Original strand, 10582015 - 10582145
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcacc 381  Q
    |||||||||||||| |||||||||| || | ||||||||||||| |||||||||||| | |||||||| ||||||||||||| |||||| ||||||||||    
T  10582015 atcgactaattcgaggggaccaatccca-cgcccacttgcgagggcccgtttaaagctagagcaagctctgtatggacttagcccaccgaaattggcacc 10582113  T
Q  382 agagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||||| | ||||||| |||||    
T  10582114 agagggaatcgaacctgagacctctggaggag 10582145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 15038147 - 15038017
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||||||||  || |||||||||| || | |||||||||| || | |||||||||||||||||||||| ||||||||||||| ||    
T  15038147 tatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagcaagctctgtatggacttagccc 15038048  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||||||||| || |||||||||||    
T  15038047 accgaaattggcaccaaagggaatcgaacct 15038017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 33827582 - 33827728
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| | | |||||||||| || | ||||||||| | || |||||||||||||| |||||||| ||||||||||||| ||    
T  33827582 tatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagagcaagctctgtatggacttagccc 33827681  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | || |||||||||||||| ||||||||||| | ||||||| |||||    
T  33827682 aacgaaattggcaccagagggaatcgaacctgagacctctggaggag 33827728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 35171988 - 35171842
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  35171988 tatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 35171889  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||  |||||| ||||||||||| | ||||||| |||||    
T  35171888 accgaaattggtgccagagggaatcgaacctgagacctctggaggag 35171842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 44946062 - 44946208
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| ||  |||||||||||||| |||||| | ||||||||||||| ||    
T  44946062 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagttctgtatggacttagccc 44946161  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||||| || ||||||||||| | ||||||| |||||    
T  44946162 accgaaattggcaccaaagggaatcgaacctgagacctctggaggag 44946208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 17324960 - 17324808
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    ||||| ||||||||||| ||| ||||||||||| || ||||| |||| || | |||||||| | || ||| |||||||||| |||||||| |||||||||    
T  17324960 aaactcgatatccgatc-aagaatcgactaatttgaggggactaatcccaccgcccacttgtgggggcccatttaaagccagagcaagctctgtatggac 17324862  T
Q  360 ttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  17324861 ttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggag 17324808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 282 - 413
Target Start/End: Complemental strand, 24196176 - 24196046
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcacc 381  Q
    |||||||||| ||| |||||||||| || | |||||||||| ||||| ||||||||||| |||||| | ||||||||||||| |||||| |||| |||||    
T  24196176 atcgactaatccgaggggaccaatcccaccgcccacttgcggggccc-gtttaaagccagagcaagttctgtatggacttagcccaccgaaatttgcacc 24196078  T
Q  382 agagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||||| ||||||||| |||||    
T  24196077 agagggaatcgaacctgaaacctctggaggag 24196046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 28669061 - 28668946
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||  |||||||||| ||| |||||||||| || | |||||||| | || |||||||||||||||||||||||| ||||||||||||||||    
T  28669061 tatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagcaagctctgtatggacttagtcc 28668962  T
Q  367 accggaattggcacca 382  Q
    |||| |||||||||||    
T  28668961 accgaaattggcacca 28668946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 268 - 406
Target Start/End: Original strand, 30466839 - 30466978
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccg-tttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||   |||||||||| || |||| |||||||||| |||||||| ||||||||||||| ||    
T  30466839 tatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaagctctgtatggacttagccc 30466938  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    |||| |||||||| ||||| ||||||||||| | ||||||    
T  30466939 accgaaattggcagcagagagaatcgaacctgagacctct 30466978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 36242321 - 36242467
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||| |||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||  ||||||||| ||    
T  36242321 tatccgatccaagaatcgattaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagctctggctggacttagccc 36242420  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||| |||||||| ||||||||||| | ||||||| |||||    
T  36242421 accgaaattgacaccagagggaatcgaacctgagacctctggaggag 36242467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 43374339 - 43374480
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | | |||||||| || |    ||||||||| ||||||||||||||  |||||| |||    
T  43374339 tatccgatccaagaatcgactaatccgaagggaccaatcccaccgctcacttgcgggggc----ttaaagccagagcaagctttgtataaacttagccca 43374434  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| |||||||||||||| ||||||||||| | |||||||||||||    
T  43374435 ccgaaattggcaccagagggaatcgaacctgagacctctgaaggag 43374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 394
Target Start/End: Complemental strand, 3943936 - 3943801
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||||||  | |||||||| | | |||||||||| || |||||||||||| | |||||||||||||||| |||||||| ||||||||    
T  3943936 aaacttggtatccgatccaataaccgactaatccaaggggaccaatcccaccacccacttgcgggagccccgtttaaagccagagcaagctctgtatgga 3943837  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaa 394  Q
    ||||| | |||| ||||||||||||||  |||||||    
T  3943836 cttagccaaccgaaattggcaccagagaaaatcgaa 3943801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 11941219 - 11941365
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| ||  |||||||||||||| |||||||| ||||||||||||  ||    
T  11941219 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatggacttaaccc 11941318  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||  ||||||||||| || |||| |||||| | ||||||| |||||    
T  11941319 accaaaattggcaccatagggaattgaacctgagacctctggaggag 11941365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 260 - 413
Target Start/End: Original strand, 34516415 - 34516563
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    ||||||| ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||  || |||||||||||| | |||||||| |||||||||    
T  34516415 aaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaggggcccgtttaaagcgagagcaagctctgtatggac 34516514  T
Q  360 ttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||| ||||  ||||     ||||||||||| ||||||||| |||||    
T  34516515 ttagcccaccgaaattaccacc-----gaatcgaacctgaaacctctggaggag 34516563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 36390578 - 36390707
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| ||||||| || ||| |||||||||| || | |||||||||| ||  ||| ||||||| || |||||||||||||||||||||||||    
T  36390578 tatccgattcaagtatcgactgatccga-gggaccaatcccaccgcccacttgcgggggtcccatttaaagtcagagcaagctttgtatggacttagtcc 36390676  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||||||||||||  ||||||||||    
T  36390677 accgaaattggcaccagaggaaatcgaacct 36390707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 413
Target Start/End: Original strand, 44976176 - 44976309
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggca 379  Q
    |||||||||| ||| |||| ||||| || | |||||||||| ||  ||||||||||||||| ||||| || ||||||||||||| |||||  ||||||||    
T  44976176 atcgactaatccgaagggatcaatcccaccgcccacttgcggggagccccgtttaaagccagagcaaactctgtatggacttagcccaccaaaattggca 44976275  T
Q  380 ccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||| ||||||||||| | ||||||| |||||    
T  44976276 ccagagggaatcgaacctgagacctctggaggag 44976309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 41314187 - 41314034
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    ||||||| ||||||||| ||| ||||| ||||  || |||||||||| || |  ||||||||| |  ||||||||||| || |||||||| ||||| |||    
T  41314187 aaacttggtatccgatcgaagaatcgattaatctgaggggaccaatcccaccgtccacttgcgggatcccgtttaaagtcagagcaagctctgtatagac 41314088  T
Q  360 ttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||| ||||| |||||||| ||||||||||| | ||||||| |||||    
T  41314087 ttagcccaccgaaattgacaccagagggaatcgaacctgagacctctggaggag 41314034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 406
Target Start/End: Complemental strand, 25293347 - 25293215
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||| |||||||||| ||| |||||||||| |||| |||||||||  | ||||||||||||||||| |||        |||| |||||| |    
T  25293347 tatccgatccaagaatcgactaatccgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagc--------tatgaacttagcc 25293256  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    ||||| |||||||||||||| ||||||||||| | ||||||    
T  25293255 caccgaaattggcaccagagggaatcgaacctgagacctct 25293215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 407
Target Start/End: Complemental strand, 45271572 - 45271432
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||| ||| ||| ||||||||||| || |||| |||||||  | | ||||||| | |||  |||||||||||| |||||||| ||||||||||||| ||    
T  45271572 tatccaatcaaagaatcgactaatttgaggggatcaatctctccgctcacttgcaggggcttcgtttaaagccagagcaagctctgtatggacttagccc 45271473  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    || | |||||||||||||| ||||||||| | |||||||||    
T  45271472 actgaaattggcaccagagggaatcgaacatgaaacctctg 45271432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 4769358 - 4769259
Alignment:
Q  264 ttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggactta 362  Q
    ||||||||||||| ||| ||||||||||| || |||||||| |||| |  ||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  4769358 ttgatatccgatctaagaatcgactaatttgaggggaccaacctcaccgtccacttgcggggcccccgtttaaagccagagcaagctctgtatggactta 4769259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 5394205 - 5394075
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||||| |||||||| |||  ||||||||| || | ||||||||||  |||||| ||||||| || ||||| || ||||||||||||| ||    
T  5394205 tatccgatctaaggaccgactaatccgaacggaccaatcccaccgcccacttgcggcggccccatttaaagtcagagcaaactctgtatggacttagccc 5394106  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    | || ||||| |||||||| |||||||||||    
T  5394105 atcgaaattgacaccagagggaatcgaacct 5394075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 27290716 - 27290630
Alignment:
Q  327 cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||  || ||||||||||| | ||||||| |||||    
T  27290716 cccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccgaagggaatcgaacctgagacctctggaggag 27290630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 407
Target Start/End: Original strand, 2140495 - 2140632
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||  |||||||||| ||| |||||||||| || | |||||||||  | || ||| |||||||||| |||||||| |||||||||    ||    
T  2140495 tatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggggggcccatttaaagccagagcaagctctgtatggac----tc 2140590  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    ||||| ||||| |||||||| ||||||||||| | |||||||    
T  2140591 caccgaaattgacaccagagggaatcgaacctgagacctctg 2140632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 413
Target Start/End: Original strand, 4567503 - 4567592
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||||||| | |||||| |||||||| |||| |||||| ||||||||||||||  |||||||||| | || ||||||||||    
T  4567503 ggccccgtttaaagccagaacaagctctgtatggatttagcccaccgaaattggcaccagaggaaatcgaacctgagacttctgaaggag 4567592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 8192361 - 8192490
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagc-aagctttgtatggacttagtcc 366  Q
    ||||||||||||||| |||||||| ||| ||| |||||| || | |||||||||||||  |||||  |||||| ||| ||||| | ||||||||| | ||    
T  8192361 tatccgatccaaggaccgactaatccgaggggcccaatcccaccgcccacttgcgaggggccgttctaagccagagcaaagctctatatggactt-gccc 8192459  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    ||||  ||||||||||||| |||||||||||    
T  8192460 accgacattggcaccagagggaatcgaacct 8192490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 41330030 - 41329885
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||| |||||| | ||||||||  || ||||||||||||| | |||||||| | || |||| |||||||||| |||||||| | ||||||||||| ||    
T  41330030 tatccggtccaagaaccgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagccagagcaagctct-tatggacttagccc 41329932  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
     ||  |||||||||||||| |||||||| || |||||| || |||||    
T  41329931 gccaaaattggcaccagagggaatcgaatctgaaacctttggaggag 41329885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 19850017 - 19849921
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||| ||||| ||||| ||  |||||||||||| | |||||||||| || ||| ||||||||||| |||||||| ||||| |||||||||||    
T  19850017 cgatccaagaatcgattaatttgagaggaccaatctcaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatagacttagtcca 19849921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 413
Target Start/End: Complemental strand, 1191640 - 1191555
Alignment:
Q  328 ccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||| ||||| || ||||||||||||| |||||| |||||| || |||| ||| ||||||| | ||||||| |||||    
T  1191640 ccgtttaaagccagagcaaactctgtatggacttagcccaccgaaattggtactagagggaaacgaacctgagacctctggaggag 1191555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 370
Target Start/End: Complemental strand, 19054214 - 19054110
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc--ccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    |||| |||||||| |||||||||| |||  ||||||||| || | |||||||||| ||    || ||||||||||||||||||| ||||||||||||| |    
T  19054214 tatctgatccaagaatcgactaatccgagcggaccaatcccaccgcccacttgcggggggttccatttaaagccaaagcaagctctgtatggacttagcc 19054115  T
Q  366 caccg 370  Q
    |||||    
T  19054114 caccg 19054110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 19517085 - 19517034
Alignment:
Q  313 cccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttag 363  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  19517085 cccacttacgaggaccccgtttaaagccaaagcaagctctgtatggacttag 19517034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 8259085 - 8258955
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| || || |||| || | || ||||||| || ||||| ||||||||| | |||| | ||||||||||||  ||    
T  8259085 tatccgatccaagaatcgactaatccgaaggaactaatcccaccgcctacttgcgggggccccgattaaagccagaacaagatctgtatggacttaaccc 8258986  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||  |||||||  ||||| |||||||||||    
T  8258985 accaaaattggcgtcagagggaatcgaacct 8258955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 18976464 - 18976518
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 322  Q
    ||||||||||||| |||||||||||||| |||||||||| || | ||||||||||    
T  18976464 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcg 18976518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 402
Target Start/End: Complemental strand, 32845194 - 32845144
Alignment:
Q  352 gtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaac 402  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||| ||||    
T  32845194 gtatggacttagcccaccgaaattggcaccagagggaatcgaacctgaaac 32845144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 413
Target Start/End: Original strand, 5608104 - 5608189
Alignment:
Q  328 ccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||||||| || |||||||| | ||||||||||| |||||  ||||| |||||||| ||||||||  | | |||||||||||||    
T  5608104 ccgtttaaagtcagagcaagctctatatggacttagcccaccaaaattgacaccagagagaatcgaatatgagacctctgaaggag 5608189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 397
Target Start/End: Original strand, 23787062 - 23787147
Alignment:
Q  313 cccacttgcg-aggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||||||||| ||| ||| ||||||| || ||||| || |||||||| |||| |||||| |||||||||||||| ||||| |||||    
T  23787062 cccacttgcggaggtcccatttaaagtcagagcaaactctgtatggatttagcccaccgaaattggcaccagagggaatcaaacct 23787147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 19605847 - 19605907
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 320  Q
    ||||| |||||||||||||||  || |||||||||| ||||||||||||| | ||||||||    
T  19605847 aaactcgatatccgatccaagtgtcaactaattcgaggggaccaatctcaccgcccacttg 19605907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 332
Target Start/End: Original strand, 8024677 - 8024744
Alignment:
Q  266 gatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtt 332  Q
    ||||||| ||||||||| ||||||||| ||  |||||||||||| || |||||||||| |||||||||    
T  8024677 gatatccaatccaaggaccgactaatttgagaggaccaatctcaccatccacttgcgacggccccgtt 8024744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 19174950 - 19174821
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa-gctttgtatggacttagtcc 366  Q
    ||||||||||||||| ||| |||| ||| |||| ||||| || | |||| || || ||| |||||  |||||| ||||| ||| ||||||||| ||  ||    
T  19174950 tatccgatccaaggaccgattaatccgaggggatcaatcccaccgcccatttacggggctccgttctaagccagagcaaagctctgtatggacctac-cc 19174852  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||  |||||||||||    
T  19174851 accgaaattggcaccagaaggaatcgaacct 19174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Original strand, 1845725 - 1845758
Alignment:
Q  329 cgtttaaagccaaagcaagctttgtatggactta 362  Q
    ||||||||||||||||||| ||||||||||||||    
T  1845725 cgtttaaagccaaagcaagttttgtatggactta 1845758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 14487013 - 14486960
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc 321  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | |||||||||    
T  14487013 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgc 14486960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 14946907 - 14946830
Alignment:
Q  328 ccgtttaaagccaaagca-agctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacct 404  Q
    ||||||||||| | |||| ||||  |||||||||||| |||| | ||||| ||||||||  |||||||||||||||||    
T  14946907 ccgtttaaagctagagcatagctccgtatggacttagcccactgaaattgacaccagagaaaatcgaacctaaaacct 14946830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 28194227 - 28194279
Alignment:
Q  351 tgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacct 404  Q
    ||||||||||| | |||||| |||||||||||||| ||||||||||||| ||||    
T  28194227 tgtatggactt-gcccaccgaaattggcaccagagagaatcgaacctaagacct 28194279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 355
Target Start/End: Complemental strand, 44610220 - 44610139
Alignment:
Q  275 tccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtat 355  Q
    |||||| | |||||||| |||||||||||||| || | ||||||||| | |||||| |||||||| | |||||||| |||||    
T  44610220 tccaagaaccgactaatccgatgggaccaatcccaccgcccacttgcaggggccccatttaaagctagagcaagctctgtat 44610139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 4852725 - 4852649
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaa 336  Q
    |||||||  |||||||||||| ||||| |||| ||| |||||||||  || |  ||||||||| |||||||||||||    
T  4852725 aaacttggcatccgatccaagaatcgattaatccgaggggaccaattccaccgtccacttgcggggccccgtttaaa 4852649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 18692148 - 18692096
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 320  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||    
T  18692148 tatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttg 18692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 15059411 - 15059557
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  15059411 tatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagcaagctctgtatggacttagccc 15059510  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  15059511 accgaaattggcaccagagagaatcgaacctgagacctctggaggag 15059557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 4621246 - 4621392
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  4621246 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagctctgtatggacttagccc 4621345  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  4621346 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 4621392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 260 - 413
Target Start/End: Original strand, 9500356 - 9500510
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||| |||||||||| ||| | ||||||||||| | |||||||| | || | ||||||||||||| |||||||| ||||||||    
T  9500356 aaactcgatatccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagcaagctctgtatgga 9500455  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||| |||||||||||||| ||||||||||| | |||||||||||||    
T  9500456 cttagcccaccgaaattggcaccagagagaatcgaacctgagacctctgaaggag 9500510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 24122211 - 24122065
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| | |||||||||||||||| |||||||| ||||||||||||| ||    
T  24122211 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatggacttagccc 24122112  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  24122111 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 24122065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 24674581 - 24674435
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  24674581 tatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 24674482  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  24674481 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 24674435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 260 - 413
Target Start/End: Original strand, 7766728 - 7766882
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| |||||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| || |||||||||||| || |||||||| ||||||||    
T  7766728 aaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagcaagctctgtatgga 7766827  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||| |||| ||||||||| ||||||||||| | ||||||| |||||    
T  7766828 cttagcccaccgaaattagcaccagagggaatcgaacctgagacctctggaggag 7766882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 7578597 - 7578452
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||  ||| |||||| ||| || ||||||| || ||||||||||||||| |||||||||||| || |||||||||||||||||||||| ||    
T  7578597 tatccgatccaaaaatcaactaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaagtcagagcaagctttgtatggacttagccc 7578498  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaagga 412  Q
    |||| ||||||||||| || ||||||||||| | ||||||| ||||    
T  7578497 accgaaattggcaccatagggaatcgaacctgagacctctggagga 7578452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 17935957 - 17935811
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| |||  ||||||||| |||| |||||||||| || ||||||||||||||| ||||| || ||||||||||||| ||    
T  17935957 tatccgatccaagaatcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagccagagcaaactctgtatggacttagccc 17935858  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||| |||  ||||||||||| | ||||||| |||||    
T  17935857 accgaaattggcactagaaggaatcgaacctgagacctctggaggag 17935811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 407
Target Start/End: Complemental strand, 18647041 - 18646901
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| |||||||||||||| |||| |||||||| | ||||||| | | ||| ||||||||||||| ||||| |||||||| ||||||| ||    
T  18647041 tatccgattcaagaatcgactaattcgaggggatcaatctcaccgcccacttacaggggctccgtttaaagccagagcaaactttgtatagacttagccc 18646942  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    |||| |||||||||||||| ||||||||||| | |||||||    
T  18646941 accgaaattggcaccagagagaatcgaacctgagacctctg 18646901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 27454873 - 27455021
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc---cccgtttaaagccaaagcaagctttgtatggacttagt 364  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||| |||| ||    |||||||||||||| |||||||| |||||||||||||     
T  27454873 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacatgcggggggggcccgtttaaagccagagcaagctctgtatggacttagc 27454972  T
Q  365 ccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
     ||||| |||||||| ||||||||||||||||| | ||||||| |||||    
T  27454973 tcaccgaaattggcatcagagtgaatcgaacctgagacctctggaggag 27455021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 413
Target Start/End: Complemental strand, 7947002 - 7946886
Alignment:
Q  297 gggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacc 396  Q
    ||||||||||||| |||||||||||| |||||| |||||||| | |||||||| ||||| ||||||| |||||| |||||||||||||| |||||||||     
T  7947002 gggaccaatctcaccacccacttgcggggccccatttaaagcgagagcaagctctgtatagacttagcccaccgaaattggcaccagagggaatcgaact 7946903  T
Q  397 taaaacctctgaaggag 413  Q
    | | ||||||| |||||    
T  7946902 tgagacctctggaggag 7946886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 270 - 413
Target Start/End: Complemental strand, 8077832 - 8077689
Alignment:
Q  270 tccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtccac 368  Q
    ||||||||||  ||||| |||| ||| |||||||||| || | |||||||||| || ||| ||||||||||| |||||||| ||||||||||||| ||||    
T  8077832 tccgatccaataatcgattaat-cgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccac 8077734  T
Q  369 cggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    || |||||||||||||| ||||||||||| | ||||||| |||||    
T  8077733 cgaaattggcaccagagagaatcgaacctgagacctctggaggag 8077689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 23734313 - 23734158
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatgg 357  Q
    ||||||| |||||||| |||| ||||||||||  || ||||||||| ||| | |||||||||| ||  |||||||||||| || ||||| || |||||||    
T  23734313 aaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaactctgtatgg 23734214  T
Q  358 acttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||| |||||| |||||||| ||||| ||||||||||| | ||||||| |||||    
T  23734213 acttagcccaccgaaattggcatcagagggaatcgaacctgagacctctggaggag 23734158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 23741505 - 23741350
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatgg 357  Q
    ||||||| |||||||| |||| ||||||||||  || ||||||||| ||| | |||||||||| ||  |||||||||||| || ||||| || |||||||    
T  23741505 aaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaactctgtatgg 23741406  T
Q  358 acttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||| |||||| |||||||| ||||| ||||||||||| | ||||||| |||||    
T  23741405 acttagcccaccgaaattggcatcagagggaatcgaacctgagacctctggaggag 23741350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 397
Target Start/End: Complemental strand, 30677372 - 30677234
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| |||||||| |||||| | ||||||||  || |||||||||| || | |||||||||| ||  ||| ||||||||||||||||||| ||||||||    
T  30677372 aaactcgatatccggtccaagaaccgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagcaagctctgtatgga 30677273  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||| |||||||||||||| ||||| |||||    
T  30677272 cttagcccaccgaaattggcaccagagggaatcaaacct 30677234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 36155897 - 36156043
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||||||||| || |||||||||| || | ||||| |||| || ||| ||||||| | |||||||||| || |||||||| | ||    
T  36155897 tatccgatccaagaatcgactaatttgaagggaccaatcccaccgcccacctgcgggggccctgtttaaaactaaagcaagctctgcatggacttggccc 36155996  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  36155997 accgaaattggcaccagagggaatcgaacctgacacctctggaggag 36156043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 397
Target Start/End: Complemental strand, 46608006 - 46607868
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||||| |||||||| ||| |||| ||||| || | |||||||||| ||   || ||||||| || |||||||| ||||||||    
T  46608006 aaactcgatatccgatccaaggaccgactaatccgaggggatcaatcccaccgcccacttgcgggggggccttttaaagtcagagcaagctctgtatgga 46607907  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||| |||||||||||||| |||||||||||    
T  46607906 cttagcccaccgaaattggcaccagagggaatcgaacct 46607868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 395
Target Start/End: Complemental strand, 1379085 - 1378958
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||| ||| ||||||||||  || ||||||||||||| |  ||||||||| || |||||||||||||| |||||| | ||||||||||||| |||    
T  1379085 tatccgatctaagaatcgactaatctgaggggaccaatctcaccgtccacttgcgggggcccgtttaaagccagagcaagttctgtatggacttagccca 1378986  T
Q  368 ccggaattggcaccagagtgaatcgaac 395  Q
    ||| ||||| ||||||||  ||||||||    
T  1378985 ccgaaattgacaccagaggaaatcgaac 1378958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 268 - 406
Target Start/End: Original strand, 45859052 - 45859191
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||  ||| |||||| ||| ||||||||||  | |||||||||||| || ||| ||||||||| | |||||||  ||||||||||||| ||    
T  45859052 tatccgatccaataatcaactaatccgaggggaccaatcctaccacccacttgcgggggccctgtttaaagcaagagcaagcgatgtatggacttagccc 45859151  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    |||| |||||||||||||| ||||||||||| | ||||||    
T  45859152 accgaaattggcaccagagggaatcgaacctgagacctct 45859191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 7197256 - 7197401
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||| | |||||||||| ||| ||||||||||||| | ||||||||| | |||| |||||||||||| |||||| | ||||| ||||||  ||    
T  7197256 tatccgatccatgaatcgactaatccgaggggaccaatctcaccgcccacttgcaggggcctcgtttaaagccagagcaaggtctgtattgactta-ccc 7197354  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||| ||||| ||||||||||| | ||||||| |||||    
T  7197355 accgaaattggcatcagagggaatcgaacctgagacctctggaggag 7197401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 409
Target Start/End: Original strand, 8254761 - 8254903
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| |||||||||||| | |||| ||||| || | |||||||||| || ||||||||||||||| |||||| | |||||| |||||| ||    
T  8254761 tatccgattcaagaatcgactaattcaaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctgtatgaacttagccc 8254860  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaa 409  Q
    |||| ||||| ||||||||  |||||||||| | |||||||||    
T  8254861 accgaaattgacaccagagataatcgaacctgagacctctgaa 8254903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 32729732 - 32729603
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||||||| || |||||||| | | |||| ||||| || | |||||||||| || |||| |||||||||| |||||||| ||||||||||| | ||    
T  32729732 tatccgatccaaagaccgactaatccaaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctctgtatggactt-gccc 32729634  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||||||||| || |||||||||||    
T  32729633 accgaaattggcaccatagggaatcgaacct 32729603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 40802082 - 40802171
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggactt 361  Q
    |||| |||| |||||||||||| |  |||||||||||| |||||||||||| || ||||||||||| || |||||||| |||||||||||    
T  40802082 cgattcaagaatcgactaattctagaggaccaatctcaccacccacttgcggggacccgtttaaagtcagagcaagctctgtatggactt 40802171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 397
Target Start/End: Complemental strand, 16899687 - 16899561
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagc-aagctttgtatggacttagtccacc 369  Q
    ||||||||||| |||||||| ||| ||||||||||||| |  |||||||| | |||||||||  || ||| ||| ||||||||||||||| | | |||||    
T  16899687 cgatccaaggaccgactaatccgaggggaccaatctcaccgtccacttgcaggggccccgttctaaaccagagcaaagctttgtatggac-tggcccacc 16899589  T
Q  370 ggaattggcaccagagtgaatcgaacct 397  Q
    | |||||||||||||| |||||||||||    
T  16899588 gaaattggcaccagagggaatcgaacct 16899561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 413
Target Start/End: Original strand, 18533725 - 18533879
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||| ||| ||||| ||||  || |||||||||| ||   ||||||||| | |||||||||||||| || | |||||| | ||||||    
T  18533725 aaacttggtatccgatctaagaatcgattaatatgaggggaccaatcccacggcccacttgcaggggccccgtttaaagtcagaacaagctctatatgga 18533824  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||| || ||||||||| |||| ||||| || || | ||||||| |||||    
T  18533825 cttagtccatcgaaattggcactagagagaatcaaatctgatacctctggaggag 18533879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 407
Target Start/End: Original strand, 23232295 - 23232414
Alignment:
Q  293 cgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagc----aagctttgtatggacttagtccaccggaattggcaccagagtg 387  Q
    |||| ||||||||| || |||||||||||| ||  ||| |||||||||| |||    ||||| ||||||||||||| |||||| ||||||| |||||| |    
T  23232295 cgataggaccaatcccaccacccacttgcgggggtcccatttaaagccagagcttgcaagctctgtatggacttagcccaccgaaattggcgccagaggg 23232394  T
Q  388 aatcgaacctaaaacctctg 407  Q
    |||||||||| |||||||||    
T  23232395 aatcgaacctgaaacctctg 23232414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 416
Target Start/End: Complemental strand, 32930878 - 32930788
Alignment:
Q  326 ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggagtaa 416  Q
    ||||||||||||||| |||||||| || |||||||||| |||||  ||| ||||||||||  |||||||| | | ||||||||||||||||    
T  32930878 ccccgtttaaagccagagcaagctctgcatggacttagcccaccaaaatgggcaccagaggaaatcgaacttgagacctctgaaggagtaa 32930788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 37351462 - 37351600
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaag---------ccaaagcaagctttgtatgga 358  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | |||||||| | || |||||||||||         ||| |||||||| ||||||||    
T  37351462 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgtgggggcccgtttaaagccagagcttccagagcaagctctgtatgga 37351561  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||| |||||||| ||||  |||||||||||    
T  37351562 cttagcccaccgaaattggcatcagaaggaatcgaacct 37351600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 1818896 - 1818807
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatgg 357  Q
    ||||||||||||  || ||||||| ||||| ||||||||   ||||| ||||||| || ||||||||||||||||||||||| |||||||    
T  1818896 tatccgatccaataattgactaatccgatgtgaccaatcatgtcacctacttgcgggggcccgtttaaagccaaagcaagctctgtatgg 1818807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 45331689 - 45331746
Alignment:
Q  325 gccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcacca 382  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||| ||||| |||||    
T  45331689 gccccgtttaaagccaaagcaagctctgtatggacttagcccaccgaaattgccacca 45331746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 34778527 - 34778384
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| | | |||||||||| || |  ||||||||| || ||||||||||||||||||||| || ||||||||   |  ||    
T  34778527 tatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccaaagcaaactctgtatgga---aaccc 34778431  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||  |||||| ||||||| ||||| ||||| | ||||||| |||||    
T  34778430 accaaaattggtaccagagggaatcaaacctgagacctctggaggag 34778384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 413
Target Start/End: Original strand, 33905574 - 33905665
Alignment:
Q  322 gaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||||||||| | ||| || ||||||||||||  |||||| |||||  ||||||| ||||||||||| | ||||||| |||||    
T  33905574 gaggccccgtttaaagccagaacaaactctgtatggacttaacccaccgaaattgataccagagggaatcgaacctgagacctctggaggag 33905665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 168329 - 168259
Alignment:
Q  327 cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||||||||| || | |||||| |||||| |||||| |||||| |||||||||||||| |||||||||||    
T  168329 cccgtttaaagtcagaacaagctctgtatgaacttagcccaccgaaattggcaccagagggaatcgaacct 168259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 2272532 - 2272386
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||||  || |||||||||| |||||||| |||||  | | ||| ||||  | |||||||||||||| || ||||| ||||||||| |||||| ||    
T  2272532 tatccgatcttagaatcgactaatccgatgggatcaatcctaccgcccccttgtaggggccccgtttaaagtcagagcaaactttgtatgaacttagccc 2272433  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | || |||||||| ||||| ||||| ||||| | ||||||| |||||    
T  2272432 agcgaaattggcatcagagggaatcaaacctgagacctctgtaggag 2272386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 16539795 - 16539666
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagc-aagctttgtatggacttagtcc 366  Q
    |||||||| |||| ||||||||||| || |||||||||| || ||||||||| |  |||||||||  ||||||  || ||||| ||||||||||| | ||    
T  16539795 tatccgatacaagtatcgactaatttgaggggaccaatcccaccacccacttacagggccccgttctaagccagcgcaaagctctgtatggactt-gccc 16539697  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||  |||||||||||||| ||||| |||||    
T  16539696 accaaaattggcaccagagggaatcaaacct 16539666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 376
Target Start/End: Original strand, 8779745 - 8779854
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | || ||||| | || ||||||||||||| | || ||||| ||||||||||||| ||    
T  8779745 tatccgatctaagaatcgactaatccgaggggaccaatcccaccgcctacttgtgggggccccgtttaaagctagagtaagctgtgtatggacttagccc 8779844  T
Q  367 accggaattg 376  Q
    |||| |||||    
T  8779845 accgaaattg 8779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 40145890 - 40146025
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccac------ttgcgaggccccgtttaaagccaaagcaagctttgtatggactt 361  Q
    ||||||||||||| |||||||||| ||| |||||||| |||| |||||||      ||| | || ||| ||||||| || |||||||| |||||||||||    
T  40145890 tatccgatccaagaatcgactaatccgaggggaccaaactcaccacccacttgtggttgtgggggcccatttaaagtcagagcaagctctgtatggactt 40145989  T
Q  362 agtccaccggaattggcaccagagtgaatcgaacct 397  Q
    || ||||   ||||||||| ||||  ||||||||||    
T  40145990 agcccacataaattggcactagaggaaatcgaacct 40146025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 46113493 - 46113557
Alignment:
Q  349 tttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||||| |||||| |||||| ||||||| ||||||||||| | ||||||| |||||    
T  46113493 tttgtatggacttagcccaccgaaattggtaccagagggaatcgaacctgagacctctggaggag 46113557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 26513161 - 26513244
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtat 355  Q
    ||||||||| |||||||||| ||| ||||||| || || | |||||||| | || ||||||||||| || ||||||||||||||    
T  26513161 cgatccaagaatcgactaatccgaggggaccattcccaccgcccacttgtgggggcccgtttaaagtcagagcaagctttgtat 26513244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 27159281 - 27159205
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaa 336  Q
    ||||| |||||||||||||| |||||||||||  || |||||||||| || |  ||||||||| || ||||||||||    
T  27159281 aaactcgatatccgatccaaagatcgactaatctgaggggaccaatcccaccgtccacttgcgggggcccgtttaaa 27159205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 48699955 - 48699875
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcc 339  Q
    ||||| ||||||||||||||| |||||||||| ||| |||| ||||| || | ||||||||| | ||| ||||||||||||    
T  48699955 aaactcgatatccgatccaagaatcgactaatccgaagggaacaatcccaccgcccacttgcgggggctccgtttaaagcc 48699875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 339
Target Start/End: Original strand, 3272943 - 3272997
Alignment:
Q  285 gactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagcc 339  Q
    ||||||||||| || |||||||||||| |||||||| | |||||| |||||||||    
T  3272943 gactaattcgagggaaccaatctcatcgcccacttgtggggccccatttaaagcc 3272997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 21726857 - 21726771
Alignment:
Q  327 cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||||||||| | | |||||| | ||||||||||  ||| || ||||||||||| || ||||||||||| | ||||||| |||||    
T  21726857 cccgtttaaagctagaacaagctctatatggacttaacccatcgaaattggcaccaaagggaatcgaacctgagacctctggaggag 21726771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 23041710 - 23041672
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatc 306  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  23041710 tatccgatccaagaatcgactaattcgaggggaccaatc 23041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 29057363 - 29057476
Alignment:
Q  284 cgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcacca 382  Q
    ||||||||| || |||||||||| |||| |||| ||||| ||  |||||| ||||||| |||||||| ||||| |||||   ||| || ||||||||| |    
T  29057363 cgactaatttgaggggaccaatcacatcgcccatttgcgggggtcccgttgaaagccagagcaagctctgtatagacttta-ccatcgaaattggcacaa 29057461  T
Q  383 gagtgaatcgaacct 397  Q
    ||| |||||||||||    
T  29057462 gagggaatcgaacct 29057476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 404
Target Start/End: Complemental strand, 31162938 - 31162801
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaa-gctttgtatggacttagtc 365  Q
    |||||||| |||||||||||||||| ||   |||||||||||   | |||||| | || |||| |||||||| | ||||| ||  |||||| || | |||    
T  31162938 tatccgattcaaggatcgactaattagagatgaccaatctcactgctcacttgtgtgggccccatttaaagctagagcaaagcactgtatgtacct-gtc 31162840  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacct 404  Q
    ||||| |||||| ||||||||||||||| ||||||||||    
T  31162839 caccgaaattggtaccagagtgaatcgagcctaaaacct 31162801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 268 - 407
Target Start/End: Original strand, 18176896 - 18177036
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| |||||||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||||||    
T  18176896 tatccgatccaagaatcgactaatccgatgggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagtcc 18176995  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    |||| |||||||||||||| ||||||||||| | |||||||    
T  18176996 accgaaattggcaccagagggaatcgaacctgatacctctg 18177036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 52821645 - 52821790
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||| || ||||||||||||||||| |||||||| |||||||||||||  ||    
T  52821645 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttacggggccccgtttaaagccagagcaagctctgtatggacttagctca 52821744  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  52821745 ccgaaattggcaccagagggaatcgaacctgagacctctggaggag 52821790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 260 - 393
Target Start/End: Original strand, 53288714 - 53288847
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    ||||||| || |||||||||  |||||||||||||| ||||| ||||||| |  ||  ||||| ||||||||||||||||||||||||||||||||||||    
T  53288714 aaacttggtaaccgatccaataatcgactaattcgaggggactaatctcaccgtccgtttgcggggccccgtttaaagccaaagcaagctttgtatggac 53288813  T
Q  360 ttagtccaccggaattggcaccagagtgaatcga 393  Q
    ||||||||||| |||||||||||||| |||||||    
T  53288814 ttagtccaccgaaattggcaccagagggaatcga 53288847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 25289724 - 25289869
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  25289724 tatccgatccaagaatcgactaattcga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 25289822  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||| |||| ||||||||||| | ||||||| |||||    
T  25289823 accgaaattggcactagagggaatcgaacctgagacctctggaggag 25289869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 40133458 - 40133588
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  40133458 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 40133557  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||| |||||||| |||||||||||    
T  40133558 accgaaattgacaccagagggaatcgaacct 40133588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 15566509 - 15566654
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| ||||||||||  || |||||||||| || | |||||||||| || |||||||||||||| |||||||| ||||||||||||| |||    
T  15566509 tatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagcaagctctgtatggacttagccca 15566608  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| ||||||||| |||| ||||||||||| | ||||||| |||||    
T  15566609 ccgaaattggcactagagggaatcgaacctgagacctctggaggag 15566654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 274 - 413
Target Start/End: Complemental strand, 35493093 - 35492953
Alignment:
Q  274 atccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccgga 372  Q
    ||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| |||||| |    
T  35493093 atccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaa 35492994  T
Q  373 attggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||| ||||||||||| | ||||||| |||||    
T  35492993 attggcaccagagggaatcgaacctgagacctctggaggag 35492953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 8456159 - 8456305
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| |||||||||| ||| |||||||||| ||   |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  8456159 tatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 8456258  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  8456259 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 8456305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 39041861 - 39042007
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| |||  ||||||||| || |||||||||||| || ||||||||||||||| |||||||| || |||||||||| ||    
T  39041861 tatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctctgcatggacttagccc 39041960  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||| | | ||||||| |||||    
T  39041961 accgaaattggcaccagagagaatcgaacttgagacctctggaggag 39042007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 49258271 - 49258417
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||| | || ||||||||||||||| |||||||| ||||||||||||| ||    
T  49258271 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaagctctgtatggacttagccc 49258370  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||| |||| ||||||||||| | ||||||| |||||    
T  49258371 accgaaattggcactagagggaatcgaacctgagacctctggaggag 49258417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 53424186 - 53424331
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | | |||||||| || |||||||||||||| ||||| || ||||||||||||| |||    
T  53424186 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccatagcaaactctgtatggacttagccca 53424285  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| ||||||||||| || ||||||||||| | ||||||| |||||    
T  53424286 ccgaaattggcaccaaagggaatcgaacctgagacctctggaggag 53424331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 30807162 - 30807308
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||| |||||||||| ||| ||||||||||  | | |||||||||| ||  ||||||||||||||| |||||||| ||||||||||||| |    
T  30807162 tatccgatccaagaatcgactaatccga-gggaccaatcctaccgcccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagcc 30807260  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  30807261 caccgaaattggcaccagagggaatcgaacctgagacctctggaggag 30807308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 268 - 394
Target Start/End: Complemental strand, 32151612 - 32151485
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| ||||||||||||| | |||||||||| || ||||||||||||||| |||||||| ||||||  ||||| ||    
T  32151612 tatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgagcttagccc 32151513  T
Q  367 accggaattggcaccagagtgaatcgaa 394  Q
    |||| ||||||||| |||| ||||||||    
T  32151512 accgaaattggcactagagagaatcgaa 32151485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 46576536 - 46576390
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| | | ||||||||||  | | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  46576536 tatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 46576437  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    || | |||||||||||||| ||||||||||| | ||||||| |||||    
T  46576436 actgaaattggcaccagagggaatcgaacctgagacctctggaggag 46576390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 48977576 - 48977446
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| |||||||| ||||||||||||  ||    
T  48977576 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagcaagctctgtatggacttaaccc 48977477  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||  |||||||||||    
T  48977476 accgaaattggcaccagaaggaatcgaacct 48977446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 10190751 - 10190881
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || |  ||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  10190751 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 10190850  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||||||| |||| ||||| |||||    
T  10190851 accgaaattggcactagagggaatcaaacct 10190881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 25379949 - 25379803
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||| |||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  25379949 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccgcttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 25379850  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
     ||| ||||||||| |||  ||||||||||| | ||||||| |||||    
T  25379849 tccgaaattggcactagaaggaatcgaacctgagacctctggaggag 25379803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 26174301 - 26174155
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccg-tttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || |||  |||||||||| |||||||| ||||||||||||  ||    
T  26174301 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagcaagctctgtatggacttaaccc 26174202  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||||||||  |||||||||| | ||||||| |||||    
T  26174201 accgaaattggcaccagaggaaatcgaacctgagacctctggaggag 26174155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 30257812 - 30257682
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||  || | |||||||||| || |||| |||||||||| |||||||| ||||||||||||||||    
T  30257812 tatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagtcc 30257713  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    | || ||||||||||| || |||||||||||    
T  30257712 atcgaaattggcaccaaagggaatcgaacct 30257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 413
Target Start/End: Original strand, 31537839 - 31537993
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||| || ||||||||||| ||||||||||||| | ||||||||| | ||| ||||||||||||| || ||||| ||||| ||    
T  31537839 aaactcgatatccgatccaagaattgactaattcgaggggaccaatctcaccgcccacttgcaggggctccgtttaaagccagagtaagctctgtataga 31537938  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||  |||||||||||||| ||||| ||| | | ||||||| |||||    
T  31537939 cttagcccaccaaaattggcaccagagggaatcaaacatgagacctctggaggag 31537993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 288 - 413
Target Start/End: Complemental strand, 40940993 - 40940867
Alignment:
Q  288 taattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagt 386  Q
    |||||||| ||||||||||  | |||||||||| | || |||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||     
T  40940993 taattcgaggggaccaatcctaccacccacttgtgggggccccgtttaaagtcagagcaagctctgtatggacttagtccaccgaaattggcaccagagg 40940894  T
Q  387 gaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||| | ||||||| |||||    
T  40940893 gaatcgaacctgagacctctggaggag 40940867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 53233920 - 53234049
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||| ||||| |||||||| ||||||||||||| ||    
T  53233920 tatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagcaagctctgtatggacttagccc 53234018  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  53234019 accgaaattggcaccagagagaatcgaacct 53234049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 394
Target Start/End: Original strand, 45272425 - 45272552
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||||||||  || |||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| ||||||||  |||||||||||| ||    
T  45272425 tatccgatccaagagtcaactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctccgtatggacttagccc 45272524  T
Q  367 accggaattggcaccagagtgaatcgaa 394  Q
    |||| |||||||||||||| ||||||||    
T  45272525 accgaaattggcaccagagggaatcgaa 45272552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 397
Target Start/End: Original strand, 2511298 - 2511436
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg-aggccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| |||||||| |||| ||| |||||||||| | |||||||| || | |||||||||| ||| ||||||||||| || ||| |||| |||||| |    
T  2511298 aaacttggtatccgattcaagaatctactaattcgaggagaccaatcccaccgcccacttgcggaggtcccgtttaaagtcagagcgagctctgtatgaa 2511397  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||| |||||||||||||| |||||||||||    
T  2511398 cttagcccaccgaaattggcaccagagggaatcgaacct 2511436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 8097288 - 8097418
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||| ||| ||||||||||||| ||    
T  8097288 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcatgctctgtatggacttagccc 8097387  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    | || |||| |||| |||| |||||||||||    
T  8097388 atcgaaattagcacaagagggaatcgaacct 8097418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 10083828 - 10083958
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || |  ||||||| | || ||||||||||||||| |||||||| ||||||||||||| ||    
T  10083828 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagcaagctctgtatggacttagccc 10083927  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||||||| |||| ||||| |||||    
T  10083928 accgaaattggcactagagggaatcaaacct 10083958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 21363131 - 21362985
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||| |||| ||| || ||||||| || | |||||||||| || | ||||||||||||| |||||||| ||||||||||||| |     
T  21363131 tatccgatccaagaatcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctgtatggacttagcct 21363032  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||| |||||||| ||||||||||| | ||||||| |||||    
T  21363031 accgaaattgacaccagagggaatcgaacctgagacctctggaggag 21362985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 45529764 - 45529909
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | |||||||||| ||  |||||||||||||| |||||||| ||||||||||||| ||    
T  45529764 tatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatggacttagccc 45529862  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | || ||||||| |||||| ||||||||||| | ||||||| |||||    
T  45529863 atcgaaattggctccagagggaatcgaacctgagacctctggaggag 45529909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 26108423 - 26108334
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  26108423 ggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggag 26108334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 413
Target Start/End: Original strand, 29915288 - 29915424
Alignment:
Q  277 caaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattg 376  Q
    |||| ||||||||||||||||||| ||||| || | |||||||||| || ||||||||||||||  ||||||| |||||| |||||| |||||| || ||    
T  29915288 caagaatcgactaattcgatgggatcaatcccaccgcccacttgcgggggcccgtttaaagccagggcaagctctgtatgtacttagcccaccgaaaatg 29915387  T
Q  377 gcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||   |||||||||| | ||||||| |||||    
T  29915388 gcaccagaagaaatcgaacctgagacctctggaggag 29915424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 413
Target Start/End: Original strand, 29964441 - 29964577
Alignment:
Q  277 caaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattg 376  Q
    |||| ||||||||||||||||||| ||||| || | |||||||||| || ||||||||||||||  ||||||| |||||| |||||| |||||| || ||    
T  29964441 caagaatcgactaattcgatgggatcaatcccaccgcccacttgcgggggcccgtttaaagccagggcaagctctgtatgtacttagcccaccgaaaatg 29964540  T
Q  377 gcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||   |||||||||| | ||||||| |||||    
T  29964541 gcaccagaagaaatcgaacctgagacctctggaggag 29964577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 24165724 - 24165817
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggactt 361  Q
    ||||||||||||| |||||||||| ||| |||| ||||| || | |||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  24165724 tatccgatccaagaatcgactaatccgaggggaacaatcccaccgcccacttgcggggccccgtttaaagccagagcaagctctgtatggactt 24165817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 33398477 - 33398605
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| || ||||||| || | |||||||||| || ||||||||||||| | |||||||| ||||||||| ||  ||    
T  33398477 tatccgatccaagaatcgactaattcgagggaaccaatcccaccgcccacttgcgggggccccgtttaaagctagagcaagctctgtatggacataaccc 33398576  T
Q  367 accggaattggcaccagagtgaatcgaac 395  Q
    |||  ||||||||| |||| |||||||||    
T  33398577 accaaaattggcactagagggaatcgaac 33398605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 409
Target Start/End: Complemental strand, 24407449 - 24407307
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||||| |||||||||||||| || |||||  | |||||  |||||  ||    
T  24407449 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgatggccccgtttaaagtcagagcaaattctgtatatacttaaccc 24407350  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaa 409  Q
    |||| |||| ||||||||| |||||||| || | |||||||||    
T  24407349 accgaaattagcaccagagagaatcgaatctgagacctctgaa 24407307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 34492584 - 34492730
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||| |||||||| ||| ||||||  ||  ||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  34492584 tatcagatccaagaatcaactaatctgaatggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 34492683  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | || |||||||| ||||| ||||||||| | | ||||||| |||||    
T  34492684 aacgaaattggcagcagagggaatcgaacatgagacctctggaggag 34492730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 52455658 - 52455804
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||| ||||||| |||||||||| ||| |||||||||| || ||  |||||||| || |||||||||||| || |||||||| ||| | ||||||| ||    
T  52455658 tatccaatccaagaatcgactaatccgaggggaccaatcccaccagtcacttgcgggggccccgtttaaagtcagagcaagctctgtgtagacttagccc 52455757  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | |  |||||||||||||| ||||||||||| | ||||||| |||||    
T  52455758 atcaaaattggcaccagagggaatcgaacctgagacctctggaggag 52455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 397
Target Start/End: Original strand, 7470270 - 7470354
Alignment:
Q  313 cccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||||||||  ||||||||||||||||| |||||||| |||||| |||||| |||||| ||||||||  |||| |||||||||||    
T  7470270 cccacttgcagggccccgtttaaagccagagcaagctctgtatgaacttagcccaccgaaattggcattagagggaatcgaacct 7470354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 8958044 - 8958191
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccg--tttaaagccaaagcaagctttgtatggacttagtc 365  Q
    |||| |||||||| ||||| ||||  || |||||||||| || | |||||||||| || |||   |||||||| | |||||||||||||||||||||| |    
T  8958044 tatctgatccaagaatcgattaatcagaggggaccaatcccaccgcccacttgcgggggccccattttaaagctagagcaagctttgtatggacttagcc 8958143  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||  ||||| ||||||||  |||||||| ||| |||| ||||||||    
T  8958144 caccaaaattgacaccagaggaaatcgaacataagacctttgaaggag 8958191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 369
Target Start/End: Original strand, 17579136 - 17579247
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga--ggccccgtttaaagccaaagcaagctttgtatgg 357  Q
    ||||| ||||| ||||||||  ||||||||||  || ||||||||||||| | ||||||||||   || |||||||||||| |||||||||| |||||||    
T  17579136 aaactcgatattcgatccaaaaatcgactaatctgaggggaccaatctcaccgcccacttgcggagggtcccgtttaaagctaaagcaagctctgtatgg 17579235  T
Q  358 acttagtccacc 369  Q
    |||||| |||||    
T  17579236 acttagcccacc 17579247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 359
Target Start/End: Complemental strand, 54475869 - 54475777
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    |||| |||||||| |||||||||| | | |||||||||| || | ||||||||||  |||||||||||||||||||||||||| |||||||||    
T  54475869 tatctgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcggtggccccgtttaaagccaaagcaagctctgtatggac 54475777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 49167231 - 49167114
Alignment:
Q  284 cgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaa---gctttgtatggacttagtccaccggaattggca 379  Q
    |||||||||| | || ||||| | || |||||||||||| ||  |||||||||||||| |||||   ||| |||||||||||||||||||| ||||| ||    
T  49167231 cgactaattcaagggaaccaaccccaccacccacttgcgggggtcccgtttaaagccagagcaaaacgctatgtatggacttagtccaccgaaattgaca 49167132  T
Q  380 ccagagtgaatcgaacct 397  Q
    |||||| |||||||||||    
T  49167131 ccagagagaatcgaacct 49167114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 55287914 - 55287845
Alignment:
Q  344 caagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||||||||||||| ||| ||| |  |||||||||||||| ||||||||||| |||||||||||||||    
T  55287914 caagctttgtatggacctagcccatcaaaattggcaccagagggaatcgaacctgaaacctctgaaggag 55287845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 55371303 - 55371376
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagcca 340  Q
    |||||||||||||||||||||||| ||| |||||||||| || | ||||||||||| |||||||||| ||||||    
T  55371303 tatccgatccaaggatcgactaatccgaggggaccaatcccaccgcccacttgcgagggccccgttttaagcca 55371376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 392
Target Start/End: Complemental strand, 1242116 - 1242036
Alignment:
Q  313 cccacttgcgaggccccgtttaaagccaaagcaa-gctttgtatggacttagtccaccggaattggcaccagagtgaatcg 392  Q
    |||||||||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||  |||||||||||||| ||||||    
T  1242116 cccacttgcgggaccccgtttaaagccagagcaaagctctgtatggacttagcccaccaaaattggcaccagagggaatcg 1242036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 1178358 - 1178230
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctt-tgtatggacttagtcc 366  Q
    |||||||||||||  ||||||||| ||| |||||||||| || | ||||| || | |||||| |||||||||| |||||  || ||||||||||| | ||    
T  1178358 tatccgatccaagattcgactaatccga-gggaccaatcccaccgcccacgtgtggggccccatttaaagccagagcaaagttctgtatggactt-gccc 1178261  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||| | |||||||||||    
T  1178260 accgaaattggcaccagggagaatcgaacct 1178230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 39890615 - 39890693
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa 346  Q
    ||||||||||||| |||||||| | |||| ||||||||||||||| || | |||| || |||||||||||||| |||||    
T  39890615 tatccgatccaagaatcgactagtccgattggaccaatctcatcatcctcctgcggggtcccgtttaaagccagagcaa 39890693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 1693021 - 1692876
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||||||| |||| ||||||||||  || ||| | |||| || | |||||||||| || || || |||||||| |||||| | ||||| |||||||||||    
T  1693021 tatccgattcaagaatcgactaatctgagggggcaaatcccaccgcccacttgcgggggcctgtctaaagccagagcaagttctgtatagacttagtcca 1692922  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| ||||| ||| | |  ||||||||||| | ||||||| |||||    
T  1692921 ccgaaattgacactaaatggaatcgaacctgagacctctggaggag 1692876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 7485540 - 7485664
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||| ||| |||||||||| || |  ||||||||  || || ||||||||||| | ||||||    ||| |||||| |||    
T  7485540 tatccgatccaagaatcgactaatccga-gggaccaatcccaccggccacttgcaggggcctgtttaaagccagatcaagct----atgaacttagccca 7485634  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
    ||| |||||||| ||||| |||||||||||    
T  7485635 ccgaaattggcatcagagggaatcgaacct 7485664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 48105065 - 48104985
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaag 347  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| | ||||||||  | ||||| ||||||||||| ||||||    
T  48105065 tatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgtgggggccctgtttaaagccagagcaag 48104985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 385
Target Start/End: Complemental strand, 11390790 - 11390672
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg-aggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| ||||  |||||||  |  || ||||| ||| ||| ||||||| || |||||||| ||||||||||||| ||    
T  11390790 tatccgatccaagaatcgactaatccgaggggaataatctcacgaatcatttgcggaggacccatttaaagacagagcaagctctgtatggacttagccc 11390691  T
Q  367 accggaattggcaccagag 385  Q
    |||  ||||| ||||||||    
T  11390690 accaaaattgacaccagag 11390672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 397
Target Start/End: Original strand, 25344071 - 25344196
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||| ||| |||||||||| ||| || ||||||| |||| |||||| ||| || ||||||||||||||| ||||| || ||||||||||||| ||||      
T  25344071 cgatctaagaatcgactaatccga-ggaaccaatcccatcgcccactagcgggggccccgtttaaagccagagcaaactctgtatggacttagaccacaa 25344169  T
Q  371 gaattggcaccagagtgaatcgaacct 397  Q
     ||||| ||||| || ||||| |||||    
T  25344170 aaattgacaccaaagggaatcaaacct 25344196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 33698716 - 33698794
Alignment:
Q  269 atccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaa 346  Q
    ||||||||| || ||||||||||| || |||||||||| || |||||| ||||| | |||||||||||||||| |||||    
T  33698716 atccgatccgagaatcgactaatttgaggggaccaatcccaccacccatttgcgggagccccgtttaaagccagagcaa 33698794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 397
Target Start/End: Complemental strand, 34844557 - 34844436
Alignment:
Q  276 ccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaa-gctttgtatggacttagtccaccggaat 374  Q
    ||||||| |||||||| ||| ||| |||||| || || ||||||||| || ||| |||||||||| ||||| ||| |||||| ||| ||||||||| |||    
T  34844557 ccaaggaccgactaatccgaggggtccaatcccaccatccacttgcgggggcccatttaaagccatagcaaagctctgtatgtact-agtccaccgaaat 34844459  T
Q  375 tggcaccagagtgaatcgaacct 397  Q
    |||| |  ||| |||||||||||    
T  34844458 tggctctggagggaatcgaacct 34844436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 48972723 - 48972850
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||||||| |||| ||||||||||||||  |||||||| ||| | |||||||| |  |  |||||||||| || ||||| || | |||| |||||  |||    
T  48972723 tatccgattcaagaatcgactaattcgaatggaccaatttcaccccccacttggg--gatccgtttaaagtcagagcaaactctatatgaacttaaccca 48972820  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
     || |||||||||||||| |||||||||||    
T  48972821 tcgaaattggcaccagagggaatcgaacct 48972850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 395
Target Start/End: Complemental strand, 4462774 - 4462693
Alignment:
Q  314 ccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaac 395  Q
    ||||||||| ||||||||||||||| | || ||||| |||||| |||||| ||| || ||||||  |||||| |||||||||    
T  4462774 ccacttgcggggccccgtttaaagctagagtaagctctgtatgaacttagcccatcgaaattggtgccagagggaatcgaac 4462693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 4252405 - 4252443
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatc 306  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  4252405 tatccgatccaaggatcgactaatccgaggggaccaatc 4252443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 53848443 - 53848497
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 322  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||||    
T  53848443 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcg 53848497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 51532902 - 51532849
Alignment:
Q  342 agcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaac 395  Q
    |||||||| ||||||||||||| |||||| ||||||||  |||| |||||||||    
T  51532902 agcaagctctgtatggacttagcccaccgaaattggcattagagagaatcgaac 51532849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 50731246 - 50731298
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 320  Q
    ||||||||||||||||||||||||  || |||||||||| || | ||||||||    
T  50731246 tatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttg 50731298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 50781608 - 50781556
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg 320  Q
    ||||||||||||||||||||||||  || |||||||||| || | ||||||||    
T  50781608 tatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttg 50781556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 4718837 - 4718691
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  4718837 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 4718738  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||||    
T  4718737 accgaaattggcaccagagggaatcgaacctgagacctctgaaggag 4718691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 39349456 - 39349302
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||||||| |||||||||| ||| |||| ||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||    
T  39349456 aaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 39349357  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  39349356 cttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggag 39349302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 269 - 413
Target Start/End: Original strand, 15259416 - 15259561
Alignment:
Q  269 atccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||||||||||| |||||||||||||| |||||||||  || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| |||    
T  15259416 atccgatccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccca 15259515  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  15259516 ccgaaattggcaccagagggaatcgaacctgagacctctggaggag 15259561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 34237664 - 34237810
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | | |||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  34237664 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 34237763  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  34237764 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 34237810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 19471802 - 19471655
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||||||||| ||  ||||||||||||||| |||||||| |||||||||||||      
T  19471802 tatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagct 19471703  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||  |||||||||||||| ||||| ||||| | ||||||| |||||    
T  19471702 caccaaaattggcaccagagggaatcaaacctgagacctctggaggag 19471655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 19542726 - 19542579
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||||||||| ||  ||||||||||||||| |||||||| |||||||||||||      
T  19542726 tatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagct 19542627  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||  |||||||||||||| ||||| ||||| | ||||||| |||||    
T  19542626 caccaaaattggcaccagagggaatcaaacctgagacctctggaggag 19542579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 19589970 - 19590117
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||||||||| ||  ||||||||||||||| |||||||| |||||||||||||      
T  19589970 tatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagct 19590069  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||  |||||||||||||| ||||| ||||| | ||||||| |||||    
T  19590070 caccaaaattggcaccagagggaatcaaacctgagacctctggaggag 19590117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 8765535 - 8765665
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| | |||||||||||||||| |||||||| ||||||||||||| ||    
T  8765535 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatggacttagccc 8765634  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    | || |||||||||||||| |||||||||||    
T  8765635 atcgaaattggcaccagagggaatcgaacct 8765665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 21603422 - 21603276
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||| ||||| ||    
T  21603422 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgggcttagccc 21603323  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||||| || ||||||||||| | ||||||| |||||    
T  21603322 accgaaattggcaccatagggaatcgaacctgagacctctggaggag 21603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 28193666 - 28193520
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||  | ||||||||||||||||| |||||||| ||||||||||||  ||    
T  28193666 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagcaagctctgtatggacttaaccc 28193567  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  28193566 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 28193520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 42328196 - 42328050
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||  ||||||| | || ||||||||||||||| |||||||| ||||||||||||| ||    
T  42328196 tatccgatccaagaatcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagccagagcaagctctgtatggacttagccc 42328097  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||| ||||| ||||| ||||| | ||||||| |||||    
T  42328096 accgaaattggcaacagagggaatcaaacctgacacctctggaggag 42328050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 269 - 413
Target Start/End: Complemental strand, 2618377 - 2618232
Alignment:
Q  269 atccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || | ||||||||||||| |||||||| ||||||||||||| |||    
T  2618377 atccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctgtatggacttagccca 2618278  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | | |||||||||||||| |||||||||| || ||||||| |||||    
T  2618277 ctgaaattggcaccagagggaatcgaacccaagacctctggaggag 2618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 268 - 394
Target Start/End: Complemental strand, 20306100 - 20305973
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||||||||||||||||||||||| |||||||||| || | |||||||||| ||  |||||||||||||| |||||||| ||||||||||||| ||    
T  20306100 tatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatggacttagccc 20306001  T
Q  367 accggaattggcaccagagtgaatcgaa 394  Q
    | || |||||||||||||  ||||||||    
T  20306000 atcgaaattggcaccagaaggaatcgaa 20305973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 268 - 394
Target Start/End: Complemental strand, 21092733 - 21092606
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||||||||||||||||||||||| |||||||||| || | |||||||||| ||  |||||||||||||| |||||||| ||||||||||||| ||    
T  21092733 tatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatggacttagccc 21092634  T
Q  367 accggaattggcaccagagtgaatcgaa 394  Q
    | || |||||||||||||  ||||||||    
T  21092633 atcgaaattggcaccagaaggaatcgaa 21092606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 3734632 - 3734762
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||   |||| ||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  3734632 tatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 3734731  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  3734732 accgaaattggcaccagagggaatcgaacct 3734762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 264409 - 264538
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||||||| |||| |||||||| | |||| ||| | || |||||||||||||| |||||||| ||||| ||||||| |||    
T  264409 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaagctatgtatagacttagccca 264508  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
    ||| ||||||||| |||| |||||||||||    
T  264509 ccgaaattggcactagagggaatcgaacct 264538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 651512 - 651383
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||||||| |||| |||||||| | |||| ||| | || |||||||||||||| |||||||| ||||| ||||||| |||    
T  651512 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaagctatgtatagacttagccca 651413  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
    ||| ||||||||| |||| |||||||||||    
T  651412 ccgaaattggcactagagggaatcgaacct 651383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 837247 - 837118
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||||||| |||| |||||||| | |||| ||| | || |||||||||||||| |||||||| ||||| ||||||| |||    
T  837247 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaagctatgtatagacttagccca 837148  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
    ||| ||||||||| |||| |||||||||||    
T  837147 ccgaaattggcactagagggaatcgaacct 837118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 14633154 - 14633000
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg-aggccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||||||| |||||||||| | | |||||||||| || | |||||||| | | || ||||| ||||||| |||||||| ||||| ||    
T  14633154 aaacttggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgtggacgctccgttcaaagccagagcaagctctgtataga 14633055  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  14633054 cttagcccaccgaaattggcaccagagggaatcgaacctgagacctctggaggag 14633000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 397
Target Start/End: Original strand, 6953021 - 6953146
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||||||| |||||||||| ||| |||||||||| || | || ||||||| || ||| ||||||||||| |||||||| ||||||||||||| ||||||    
T  6953021 cgatccaagaatcgactaatccga-gggaccaatcccaccgccaacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccg 6953119  T
Q  371 gaattggcaccagagtgaatcgaacct 397  Q
     |||||||||||||| |||||||||||    
T  6953120 aaattggcaccagagggaatcgaacct 6953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 34610696 - 34610826
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccc-cgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||||||||   | | |||||||||||||  | |||||||||||| |||||||| ||||| ||||||| ||    
T  34610696 tatccgatccaagaatcgactaattcgaggggaccaattctaccgcccacttgcgaggggctcgtttaaagccagagcaagctctgtatagacttagacc 34610795  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||| ||||| |||||||||||    
T  34610796 accgaaattggcatcagagggaatcgaacct 34610826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 42643127 - 42643273
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||| |||||| ||| |||||||||| || | |||||||||| |||||| |||| ||| || |||||||| ||||||||||||| ||    
T  42643127 tatccgatccaagaatcaactaatgcgaggggaccaatcccaccgcccacttgcggggcccccgtttcaagacagagcaagctctgtatggacttagccc 42643226  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||| |||| |||||||| || | ||||||| |||||    
T  42643227 accgaaattggcactagagggaatcgaatctgagacctctggaggag 42643273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 32879471 - 32879326
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||| ||||||| |||||||||| ||| |||||||||| || | |||||||| | || |||||||||| | || |||||||| |||||| |||||| ||    
T  32879471 tatccaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaatgtcagagcaagctctgtatgaacttagccc 32879372  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaagga 412  Q
    |||| |||||||||||||| ||||||||||| | ||||||| ||||    
T  32879371 accgaaattggcaccagagggaatcgaacctgagacctctggagga 32879326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 266 - 397
Target Start/End: Original strand, 27746342 - 27746474
Alignment:
Q  266 gatatccgatccaaggatcgactaattcgatgggaccaatctcatcaccc-acttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagt 364  Q
    ||||| ||||||||| |||||||||| ||| ||||| |||  |||| ||| ||||| | |||||| |||||||||| |||||||| |||||||||||||     
T  27746342 gatattcgatccaagaatcgactaatccgaggggactaattccatcgccccacttgtggggccccttttaaagccagagcaagctctgtatggacttagc 27746441  T
Q  365 ccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||||| ||||||||||| || |||||||||||    
T  27746442 ccaccgaaattggcaccaaagggaatcgaacct 27746474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 397
Target Start/End: Complemental strand, 25248525 - 25248411
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcacc 381  Q
    |||||||||| ||| |||||||||| || | ||||||||||||| |||||||||||||| ||||| || ||||| ||||||| | |||| ||||| ||||    
T  25248525 atcgactaatccgaggggaccaatcccaccgcccacttgcgagggcccgtttaaagccagagcaaactctgtat-gacttagcctaccgaaattgacacc 25248427  T
Q  382 agagtgaatcgaacct 397  Q
    |||| |||||||||||    
T  25248426 agagggaatcgaacct 25248411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 4698732 - 4698878
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||| ||||| | |||||||||| ||| |||||||||| || | | |||||||| || | ||||||||||||| |||||| | |  |||||||||| ||    
T  4698732 tatccaatccatgaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggctccgtttaaagccagagcaagttcttcatggacttagccc 4698831  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||| |||||||| ||||||||||| | |||||||||||||    
T  4698832 accgaaattgacaccagagggaatcgaacctgagacctctgaaggag 4698878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 267 - 407
Target Start/End: Complemental strand, 28088479 - 28088338
Alignment:
Q  267 atatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg-aggccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    |||||||||||||| |||||||| |  || |||| ||||| || | |||||||||| ||||||| ||||||| || |||||||| ||||||||||||  |    
T  28088479 atatccgatccaagaatcgactattctgaggggatcaatcccaccgcccacttgcggaggccccatttaaagtcagagcaagctctgtatggacttaacc 28088380  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    ||||| ||||| ||||| || |||||||| || | |||||||    
T  28088379 caccgaaattgacaccaaagggaatcgaatctgagacctctg 28088338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 404
Target Start/End: Complemental strand, 28964220 - 28964088
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||| ||| |||||||||||||| |||||||||| || | |||||||||| || ||||||||||||||| |   ||||  |||||||||||| ||||||    
T  28964220 cgatctaagaatcgactaattcgaggggaccaatccca-cgcccacttgcgggggccccgtttaaagccagacatagctccgtatggacttagcccaccg 28964122  T
Q  371 gaattggcaccagagtgaatcgaacctaaaacct 404  Q
     |||||||||||||  ||||||||| | ||||||    
T  28964121 aaattggcaccagatggaatcgaacatgaaacct 28964088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 397
Target Start/End: Complemental strand, 24018583 - 24018444
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc--cccgtttaaagccaaagcaagctttgtatgg 357  Q
    ||||| |||||||| |||||| | |||||||||| | ||||||||||||| | |||||||| | ||   |||||||||||||| |||||||| |||||||    
T  24018583 aaactcgatatccggtccaagaaccgactaattcaaggggaccaatctcaccgcccacttgtggggaggcccgtttaaagccagagcaagctctgtatgg 24018484  T
Q  358 acttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||||| |||| | ||||| ||  ||||  ||||||||||    
T  24018483 acttagcccactgaaattgacattagaggaaatcgaacct 24018444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 20470108 - 20469963
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||  |||||||||| ||| || ||||||| || | |||||||||| || | | ||||||||||| |||||||| ||||||||||||| ||    
T  20470108 tatccgatccaaaaatcgactaatccga-ggaaccaatcccaccgcccacttgcgggggctctgtttaaagccagagcaagctctgtatggacttagccc 20470010  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | |  ||||||| | |||| ||||||||||| | ||||||| |||||    
T  20470009 atctaaattggctctagagggaatcgaacctgagacctctggaggag 20469963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 404
Target Start/End: Original strand, 3403528 - 3403648
Alignment:
Q  285 gactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagc-aagctttgtatggacttagtccaccggaattggcacca 382  Q
    ||||||||||| |||||||| |||| | ||||||| ||| |||||| |||||||||||| | ||| ||||||||||||| | |||||| |||||||||||    
T  3403528 gactaattcgaggggaccaacctcaccgcccacttacgagggccccatttaaagccaaaacaaagttttgtatggactt-gcccaccgaaattggcacca 3403626  T
Q  383 gagtgaatcgaacctaaaacct 404  Q
    ||  ||||||||| ||| ||||    
T  3403627 gatggaatcgaacataagacct 3403648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 413
Target Start/End: Complemental strand, 18532266 - 18532153
Alignment:
Q  301 ccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaa 399  Q
    ||||||||| | ||||||||| | ||||||||||||| ||| |||||| | ||||||||||||| |||||| ||||| || | ||| ||||||||||| |    
T  18532266 ccaatctcaccgcccacttgcaggggccccgtttaaatccagagcaagttctgtatggacttagcccaccgaaattgacatctgagggaatcgaacctga 18532167  T
Q  400 aacctctgaaggag 413  Q
     ||||||| |||||    
T  18532166 gacctctggaggag 18532153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 346
Target Start/End: Original strand, 2639420 - 2639499
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaa 346  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| |||||    
T  2639420 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 2639499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 406
Target Start/End: Complemental strand, 10292242 - 10292108
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||||||| ||| |||||| ||| |||||||||| || | |||||||| | || ||||||||||||||| ||||| || || ||||||| || |||| |    
T  10292242 cgatccaagaatcaactaatccgaagggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaatctctg-atggactcagcccactg 10292144  T
Q  371 gaattggcaccagagtgaatcgaacctaaaacctct 406  Q
     |||||||| ||||| ||||||||||| | ||||||    
T  10292143 aaattggcatcagagggaatcgaacctgagacctct 10292108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 3036599 - 3036545
Alignment:
Q  192 agacacttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    ||||||| ||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  3036599 agacactggataataagtttaaagtagcaactttatcttaaaaattgtgtattca 3036545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 413
Target Start/End: Original strand, 9047348 - 9047433
Alignment:
Q  328 ccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||||||| || || |||||||||||||||||||||||||  ||||||||  |||| ||||| ||| |||||||| || |||||    
T  9047348 ccgtttaaagtcagagtaagctttgtatggacttagtccaccaaaattggcattagagggaatcaaacttaaaacctttggaggag 9047433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 24999394 - 24999289
Alignment:
Q  300 accaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaaccta 398  Q
    ||||||| || | |||||||||| || ||||||||||||||| |||||||| | |||| |||||| ||| |  |||||||| ||||| ||||||||||||    
T  24999394 accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctatatgaacttagcccatcaaaattggcatcagagggaatcgaaccta 24999295  T
Q  399 aaacct 404  Q
    | ||||    
T  24999294 agacct 24999289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 402
Target Start/End: Complemental strand, 28909012 - 28908880
Alignment:
Q  271 ccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagcca-aagcaagctttgtatggacttagtccac 368  Q
    |||||||||||| ||||||||  || |||| ||||| |||| |||||||||| | |||||||||||||||| ||  ||||| ||||||||||| | ||||    
T  28909012 ccgatccaaggaccgactaatctgaggggatcaatcacatcgcccacttgcgggagccccgtttaaagccagaacaaagctctgtatggactt-gcccac 28908914  T
Q  369 cggaattggcaccagagtgaatcgaacctaaaac 402  Q
     | ||||| |||||||| |||| |||||| ||||    
T  28908913 tgtaattgacaccagagggaattgaacctgaaac 28908880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 379
Target Start/End: Original strand, 26168862 - 26168969
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||||||| |||||||| | ||| ||||||||||||||| ||||||||||| || | | |||||||||| | |||||| |||||| |||| | ||||||    
T  26168862 cgatccaagaatcgactactccgaggggaccaatctcatcccccacttgcgaggggctcatttaaagccagaacaagctctgtatgaactt-gcccaccg 26168960  T
Q  371 gaattggca 379  Q
     ||||||||    
T  26168961 aaattggca 26168969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 404
Target Start/End: Original strand, 36848759 - 36848895
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||  | ||||||||| || ||||| |||| || | |||||||| |  ||| | |||||||||  ||||| ||  |||||||||||| |||    
T  36848759 tatccgatccaaaaaccgactaatttgaggggactaatcccaccgcccacttgtggtgcctcatttaaagcccgagcaaactccgtatggacttagccca 36848858  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacct 404  Q
    ||| ||||||||||||||  ||| ||| |||||||||    
T  36848859 ccgaaattggcaccagaggaaatggaatctaaaacct 36848895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 3049168 - 3049117
Alignment:
Q  195 cacttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    |||||||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  3049168 cacttgataagaagcttaaagtaacaactttatcttagaaattgtgtattca 3049117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 11364692 - 11364735
Alignment:
Q  64 catcattcctctgtttatgcacaatccaagcttccttaatttta 107  Q
    ||||||| |||| |||||||||||||||||||||||||||||||    
T  11364692 catcatttctctatttatgcacaatccaagcttccttaatttta 11364735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 404
Target Start/End: Original strand, 24339691 - 24339769
Alignment:
Q  326 ccccgtttaaagccaaagc-aagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacct 404  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||| || ||||  |||||||||||| ||||    
T  24339691 ccccgtttaaagccaaagcaaagctttgtatgaactta-tccaccgaaattggtacaagagaaaatcgaacctaagacct 24339769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 404
Target Start/End: Complemental strand, 18128701 - 18128568
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaa-gctttgtatggacttagtccacc 369  Q
    ||||||||| | ||||||||  ||  ||||||||| || | |||||||||| || ||||||||||||||| ||||| ||| | |||||| || | |||||    
T  18128701 cgatccaagaaccgactaatctgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaaagctctttatgga-ttcgcccacc 18128603  T
Q  370 ggaattggcaccagagtgaatcgaacctaaaacct 404  Q
    | |||||||||||||| |||||||| |||| ||||    
T  18128602 gaaattggcaccagagagaatcgaatctaagacct 18128568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 397
Target Start/End: Complemental strand, 21667681 - 21667612
Alignment:
Q  328 ccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||||||||| || |||||||| ||||||||||||| |||||| |||| |||||| ||  ||||||||||    
T  21667681 ccgtttaaaggcagagcaagctctgtatggacttagcccaccgaaattagcaccaaaggaaatcgaacct 21667612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 397
Target Start/End: Complemental strand, 2166874 - 2166761
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcacc 381  Q
    ||||||||||  || |||||||||| || | |||||||||| || |   |||||||||| |||||||| ||||||||||||| | || | |||||||||     
T  2166874 atcgactaatctgaggggaccaatcccaccgcccacttgcggggtcttatttaaagccagagcaagctctgtatggacttagcctactgaaattggcac- 2166776  T
Q  382 agagtgaatcgaacct 397  Q
     ||| |||||||||||    
T  2166775 -gagggaatcgaacct 2166761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 29912128 - 29912179
Alignment:
Q  195 cacttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    |||||||||||||||||| ||||  || |||||||||||| |||||||||||    
T  29912128 cacttgataagaagtttaaagtagaaattttatcttaaaatttgtgtattca 29912179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 15808787 - 15808741
Alignment:
Q  198 ttgataagaagtttagagtatcaactttatcttaaaaattgtgtatt 244  Q
    ||||||| ||||||| |||| ||| ||||||||||||||||||||||    
T  15808787 ttgataaaaagtttaaagtagcaattttatcttaaaaattgtgtatt 15808741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 26261913 - 26261844
Alignment:
Q  330 gtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaa 399  Q
    ||||||||| |||| ||| || ||||||||||| ||||| | ||||| |||||||| ||||| |||||||    
T  26261913 gtttaaagctaaagtaagtttcgtatggacttaatccactgaaattgacaccagagggaatcaaacctaa 26261844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 340
Target Start/End: Original strand, 7557960 - 7558032
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagcca 340  Q
    |||||||| |||  |||||||||||||| |||||||||| || |  ||||||||| ||  |||||||||||||    
T  7557960 tatccgatgcaaaaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggtccgtttaaagcca 7558032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 268 - 408
Target Start/End: Original strand, 3222645 - 3222785
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| |||||||||||||| || |||||||| ||||||||||||| |||    
T  3222645 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagacagagcaagctctgtatggacttagccca 3222744  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctga 408  Q
    ||| |||||||||||||| ||||||||||| | ||||||||    
T  3222745 ccgaaattggcaccagagggaatcgaacctgagacctctga 3222785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 11449067 - 11448913
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| |||||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||    
T  11449067 aaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 11448968  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  11448967 cttagcccaccgaaattggcaccagagagaatcgaacctgagacctctggaggag 11448913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 654155 - 654301
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||  |||||||||| ||| |||||||||| || | |||||||||| | |||||||||||||||| |||||||| ||||||||||||| ||    
T  654155 tatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatggacttagccc 654254  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  654255 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 654301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 9239163 - 9239017
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || |||| ||||||||||||||||||| | ||||||||||  ||    
T  9239163 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaagctctatatggacttaaccc 9239064  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  9239063 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 9239017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 15360107 - 15360237
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||| ||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  15360107 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 15360206  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  15360207 accgaaattggcaccagagggaatcgaacct 15360237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 34147534 - 34147404
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| ||  |||||||||||||| |||||||| ||||||||||||| ||    
T  34147534 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatggacttagccc 34147435  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  34147434 accgaaattggcaccagagggaatcgaacct 34147404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 34160150 - 34160020
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| ||  |||||||||||||| |||||||| ||||||||||||| ||    
T  34160150 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatggacttagccc 34160051  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  34160050 accgaaattggcaccagagggaatcgaacct 34160020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 268 - 406
Target Start/End: Complemental strand, 28672255 - 28672116
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||| |||||||| |||||||||| ||| |||||||||| || | |||||||||||||  |||||||||||||||| |||||| ||||||||||||| ||    
T  28672255 tatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaagctctgtatggacttagccc 28672156  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    |||  ||||| |||||||| ||||||||||||| ||||||    
T  28672155 accaaaattgacaccagagggaatcgaacctaagacctct 28672116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 412
Target Start/End: Complemental strand, 1345123 - 1344978
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| | | |||||||||| || |  ||||||||| ||  |||||||||||||| |||||||||||||||||||||| ||    
T  1345123 tatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagcaagctttgtatggacttagccc 1345024  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaagga 412  Q
    || | |||||||||||||| ||||||||||| | ||||||| ||||    
T  1345023 actgaaattggcaccagagggaatcgaacctgagacctctggagga 1344978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 11841088 - 11840943
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||  |||||||||||||| ||||| |||| || |  ||||||  | ||||||||||||| |||||||||||||||||||||||||  |||    
T  11841088 tatccgatccaataatcgactaattcgaggggactaatcccaccgtccacttatggggccccgtttaaaaccaaagcaagctttgtatggacttaaccca 11840989  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| |||||||||||||| ||||||| ||| | ||||||| |||||    
T  11840988 ccgaaattggcaccagagggaatcgagcctgagacctctggaggag 11840943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 268 - 409
Target Start/End: Original strand, 21148520 - 21148661
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| |||||||||||||| || |||||||| ||||||||||||| |||    
T  21148520 tatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagtcagagcaagctctgtatggacttagccca 21148619  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaa 409  Q
     || ||||||||| |||| ||||||||| | | |||||||||    
T  21148620 tcgaaattggcactagagggaatcgaacttgagacctctgaa 21148661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 282 - 413
Target Start/End: Complemental strand, 12390599 - 12390467
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcac 380  Q
    |||||||||| ||| |||||||||| || | |||||||||| || ||| ||||||||||| |||||||| ||||||||||||| |||||| |||||||||    
T  12390599 atcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcac 12390500  T
Q  381 cagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| ||||||||||| | ||||||| |||||    
T  12390499 cagagggaatcgaacctgagacctctggaggag 12390467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 21982330 - 21982475
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  21982330 tatccgatccaagaatcgactaatccga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 21982428  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    || | |||||||||||  | ||||||||||| | ||||||| |||||    
T  21982429 actgaaattggcaccatcgggaatcgaacctcagacctctggaggag 21982475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 407
Target Start/End: Original strand, 9690647 - 9690787
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| |||  ||||||||| || |  ||||||| |||| ||||||||||||||| |||||||| ||||||||||||| ||    
T  9690647 tatccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagcaagctctgtatggacttagccc 9690746  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    |||| ||||| ||| |||   |||||||||||| |||||||    
T  9690747 accgaaattgacactagaagaaatcgaacctaagacctctg 9690787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 406
Target Start/End: Complemental strand, 9844134 - 9843987
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||| |||||||||| ||| ||||||||||||| | ||||||||  | ||||||||||||||||| | |||||| ||||||||    
T  9844134 aaactcgatatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgagggggccccgtttaaagccagaacaagctctgtatgga 9844035  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    ||||  |||||  ||||| ||||||||  | |||||||| | ||||||    
T  9844034 cttaacccaccaaaattgacaccagaggaagtcgaacctgagacctct 9843987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 11007353 - 11007223
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||| ||| ||| |||||| || | |||||||||| || ||||| ||||||| | |||||||||||||||||||||| ||    
T  11007353 tatccgatcaaagaatcgactaatccgagggggccaatcccaccgcccacttgcgggggccccgcttaaagctagagcaagctttgtatggacttagccc 11007254  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||  | |||||||||||||||||    
T  11007253 accgaaattgagagcagagtgaatcgaacct 11007223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 406
Target Start/End: Original strand, 5360080 - 5360219
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||||||| |||||||||| || | |||||||| | ||   |||||||||| || |||||||| ||||||||||||| ||    
T  5360080 tatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttgtgggggttccgtttaaagtcagagcaagctctgtatggacttagccc 5360179  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    |||| ||||||||  |||| ||||||||||| | ||||||    
T  5360180 accgaaattggcattagagggaatcgaacctgagacctct 5360219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 391
Target Start/End: Original strand, 17081067 - 17081187
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||||||| | | ||| |||||| |||||||||| || | |||||||||| || |||| ||||||| || |||||||| ||||||||||||| ||||||    
T  17081067 cgatccaagaaacaacttattcgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctctgtatggacttagcccaccg 17081166  T
Q  371 gaattggcaccagagtgaatc 391  Q
     ||||| |||||||| |||||    
T  17081167 aaattgacaccagagggaatc 17081187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 12591766 - 12591695
Alignment:
Q  326 ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||||||||||||| |||||||| ||||||||||||| |||| | ||||||||| |||| |||||||||||    
T  12591766 ccccgtttaaagccagagcaagctctgtatggacttagcccactgaaattggcacgagagggaatcgaacct 12591695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 17149465 - 17149595
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaa-gctttgtatggacttagtc 365  Q
    |||| ||| |||||| |||||||||||| |||||||||| || |   ||||||| | |||||| |||||||||||||||| ||| ||||||||||| | |    
T  17149465 tatctgattcaaggaccgactaattcgaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaaggctctgtatggactt-gcc 17149563  T
Q  366 caccggaattggcaccagagtgaatcgaacct 397  Q
     |||| |||| ||||||||| |||||||||||    
T  17149564 aaccgaaattagcaccagagggaatcgaacct 17149595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 397
Target Start/End: Complemental strand, 9208435 - 9208310
Alignment:
Q  273 gatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag-ctttgtatggacttagtccaccg 370  Q
    |||||||| |||||||| |  || | |||||||| || | |||||||||| || |||| ||||||||||||||||| || ||||||||||| | ||||||    
T  9208435 gatccaagaatcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaaggctctgtatggactt-gcccaccg 9208337  T
Q  371 gaattggcaccagagtgaatcgaacct 397  Q
     |||||||||||| | |||||||||||    
T  9208336 aaattggcaccagggggaatcgaacct 9208310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 14213070 - 14212999
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagc 338  Q
    ||||||||||||| |||||||||| |||  ||||||||| || |||||||||||| || |||||||||||||    
T  14213070 tatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcggggcccccgtttaaagc 14212999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 33718474 - 33718547
Alignment:
Q  264 ttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaa 336  Q
    ||||||||||||||||| |||||||||| ||| |||| ||||| || |  |||||||| |||||||||||||||    
T  33718474 ttgatatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcagaggccccgtttaaa 33718547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 33499646 - 33499539
Alignment:
Q  285 gactaattcgatgggaccaatctcatcacccacttgcg-aggccccgtttaaagccaaagc-aagctttgtatggacttagtccaccggaattggcacca 382  Q
    ||||||| ||| |||||||||| || | |||||||| | ||| ||| |||||||||||||| ||| ||||||||||| ||| |||||| ||||| |||||    
T  33499646 gactaatccgaggggaccaatcccaccgcccacttgtggagggcccatttaaagccaaagcaaagatttgtatggac-tagcccaccgaaattgacacca 33499548  T
Q  383 gagtgaatc 391  Q
    ||| |||||    
T  33499547 gagggaatc 33499539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 8479487 - 8479428
Alignment:
Q  266 gatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg 325  Q
    ||||||||||| ||||| ||||||||  || ||||||||||||||| |||||||| ||||    
T  8479487 gatatccgatctaaggaacgactaatctgaggggaccaatctcatcgcccacttgtgagg 8479428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 6919437 - 6919383
Alignment:
Q  77 tttatgcacaatccaagcttccttaattttaaaattactagtcacatgtccattt 131  Q
    |||||||||||||||| ||| ||||||||||  || ||||| |||||||||||||    
T  6919437 tttatgcacaatccaaactttcttaattttagtatcactagccacatgtccattt 6919383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 413
Target Start/End: Complemental strand, 13753344 - 13753282
Alignment:
Q  351 tgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||||| |||| |||||| |||||||||||||| |||| |||||| | ||||||| |||||    
T  13753344 tgtatggatttagcccaccgaaattggcaccagagagaattgaacctgagacctctggaggag 13753282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 6067630 - 6067581
Alignment:
Q  197 cttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    |||||||||||   || |||||||||||||||||| ||||||||||||||    
T  6067630 cttgataagaaacataaagtatcaactttatcttagaaattgtgtattca 6067581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 14212994 - 14212934
Alignment:
Q  353 tatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||| ||| |  |||||||||||||| ||||||||||| | ||||||| |||||    
T  14212994 tatggacttagcccatcaaaattggcaccagagggaatcgaacctgagacctctggaggag 14212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 40512 - 40367
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  40512 tatccgatccaagaatcgactaatccga-gggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 40414  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||||    
T  40413 accgaaattggcaccagagggaatcgaacctgagacctctgaaggag 40367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 8e-37; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 260 - 397
Target Start/End: Complemental strand, 21835351 - 21835213
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||    
T  21835351 aaactcgatatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 21835252  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||| |||||||||||||| |||||||||||    
T  21835251 cttagcccaccgaaattggcaccagagggaatcgaacct 21835213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 22120080 - 22119934
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  22120080 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 22119981  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  22119980 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 22119934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 40542919 - 40543065
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  40542919 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 40543018  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  40543019 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 40543065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 7275469 - 7275323
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||| ||||||||||| |||||||| ||||||||||||| ||    
T  7275469 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagccc 7275370  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  7275369 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 7275323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 654714 - 654843
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| | |||||||| ||| |||||||||| || | |||||||||| || |||||||||||||| |||||||| ||||||||||||| |||    
T  654714 tatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagcaagctctgtatggacttagccca 654813  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
    ||| |||||||||||||| |||||||||||    
T  654814 ccgaaattggcaccagagggaatcgaacct 654843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 17196959 - 17197087
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| |||||||||||||  |    
T  17196959 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagctc 17197058  T
Q  367 accggaattggcaccagagtgaatcgaac 395  Q
    |||| |||||||||||||| |||||||||    
T  17197059 accgaaattggcaccagagggaatcgaac 17197087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 268 - 406
Target Start/End: Complemental strand, 11998041 - 11997902
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||||||||| || | |||||||||| || ||| ||||||||||| |||||||| ||||||||||||| |     
T  11998041 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagcaagctatgtatggacttagcca 11997942  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    |||| |||||||||||||| ||||||||||| | ||||||    
T  11997941 accgaaattggcaccagagggaatcgaacctgagacctct 11997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 2751463 - 2751333
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||| ||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  2751463 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 2751364  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  2751363 accgaaattggcaccagagggaatcgaacct 2751333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 7175871 - 7176017
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| ||  || ||||||||||| |||||||| ||||||||||||| ||    
T  7175871 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaagctctgtatggacttagccc 7175970  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  7175971 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 7176017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 22703678 - 22703532
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | |||||||||| ||  |||||||||||||| |||||||||||||||||||||| ||    
T  22703678 tatccgatcaaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctttgtatggacttagccc 22703579  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||| |||||||| ||||||||||| | ||||||| |||||    
T  22703578 accgaaattgacaccagagggaatcgaacctgagacctctggaggag 22703532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 408
Target Start/End: Complemental strand, 29861862 - 29861721
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||||||| |||| ||||| || | |||||||||| || ||||||||||||||| |||||| | ||||||||||||| ||    
T  29861862 tatccgatctaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctgtatggacttagccc 29861763  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctga 408  Q
    |||| |||||||||||||| ||||||||||| | ||||||||    
T  29861762 accgaaattggcaccagagggaatcgaacctgagacctctga 29861721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 28090011 - 28089878
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaag----ctttgtatggacttag 363  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||| |||||||||| || ||| |||||||||| ||||||    ||||||||||||||||    
T  28090011 tatccgatccaagaatcgactaatccgaggggaccaatctcatcgcccacttgcgggggcccatttaaagccagagcaagctcactttgtatggacttag 28089912  T
Q  364 tccaccggaattggcaccagagtgaatcgaacct 397  Q
     |||||| ||||| |||||||| | |||||||||    
T  28089911 cccaccgaaattgacaccagagggtatcgaacct 28089878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 268 - 395
Target Start/End: Complemental strand, 31274105 - 31273978
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||||| |||||| |||||||||||||| |||||||||||||   ||||||||||  |||||||||||||||| |||||||| ||||||||||||| ||     
T  31274105 tatccggtccaagaatcgactaattcgaggggaccaatctcactgcccacttgcggagccccgtttaaagccagagcaagctctgtatggacttagcccg 31274006  T
Q  368 ccggaattggcaccagagtgaatcgaac 395  Q
    ||| |||| || |||||| |||||||||    
T  31274005 ccgaaattagctccagagggaatcgaac 31273978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 18044299 - 18044169
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||||||||  || |||||||||  || |||||||||| | || ||||||||||||||| |||||||| ||||||||||||| ||    
T  18044299 tatccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagcaagctctgtatggacttagccc 18044200  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||||||| |||| |||||||||||    
T  18044199 accgaaattggcacaagagggaatcgaacct 18044169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 17212245 - 17212099
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||| |||||||| |||||||||| ||| |||||||||| || ||| ||||||| | || ||||||| |||||| ||||| || ||||||||||||| ||    
T  17212245 tatctgatccaagaatcgactaatccgaggggaccaatcccaccactcacttgcaggggtcccgttttaagccagagcaatctctgtatggacttagccc 17212146  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| |||| |||||| | ||||||| |||||    
T  17212145 accgaaattggcaccagagagaattgaacctgagacctctggaggag 17212099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 28951063 - 28950917
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| || | ||| ||||| |||||||||| || | || ||||||||||  |||||||||||||| |||||||| | |||| |||||| ||    
T  28951063 tatccgatccaagaattgtctagttcgaggggaccaatcccaccgccgacttgcgagggacccgtttaaagccagagcaagctctatatgaacttagccc 28950964  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| || |||||||| | |||||||||||||    
T  28950963 accgaaattggcaccagagggagtcgaacctgagacctctgaaggag 28950917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 413
Target Start/End: Complemental strand, 10091371 - 10091234
Alignment:
Q  277 caaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaatt 375  Q
    |||| |||||||||| ||| |||| ||||| || | |||||||||| || |||| |||||||||| |||||||| ||||||||||||| |||||| ||||    
T  10091371 caagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctctgtatggacttagcccaccgaaatt 10091272  T
Q  376 ggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| |||||| ||||||||||| | ||||||| |||||    
T  10091271 ggctccagagggaatcgaacctgagacctctggaggag 10091234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 413
Target Start/End: Complemental strand, 2103232 - 2103101
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcac 380  Q
    |||||||||| ||| |||||||||| || | |||||||||| || |||| |||||||||| |||||||| ||||||||||||| |||||| ||||||| |    
T  2103232 atcgactaatccga-gggaccaatcccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctc 2103134  T
Q  381 cagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| ||||||||||| | ||||||| |||||    
T  2103133 cagagggaatcgaacctgagacctctggaggag 2103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 21217842 - 21217988
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||| |||||| ||| |||| ||||| || | |||||||| | ||  |||||||||||| | |||||||| ||||||||||||| ||    
T  21217842 tatccgatccaagaatcaactaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagctagagcaagctctgtatggacttagccc 21217941  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||| ||||| ||||||||||| | ||||||| |||||    
T  21217942 accgaaattggcatcagagggaatcgaacctgagacctctggaggag 21217988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 385
Target Start/End: Complemental strand, 23092288 - 23092170
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||| | |||||||||| ||| |||||||||| || |  ||| ||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  23092288 tatccgatccatgaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 23092189  T
Q  367 accggaattggcaccagag 385  Q
    |||| ||||||||||||||    
T  23092188 accgaaattggcaccagag 23092170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 413
Target Start/End: Original strand, 39145653 - 39145807
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttg-tatgga 358  Q
    ||||||| |||| ||| |||| |||||||||||||| |||||||||| || |  ||||||||  || |||||||||||||| |||||||| || ||| ||    
T  39145653 aaacttggtatctgattcaagaatcgactaattcgaggggaccaatcccaccgtccacttgcaggggcccgtttaaagccagagcaagctctgttattga 39145752  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||| ||||||||||| || |||||||||| || || |||| |||||    
T  39145753 cttagcccaccgaaattggcaccacagggaatcgaaccgaagacatctggaggag 39145807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 41907523 - 41907652
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccc-cgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||||||||  |  |||||||||| || |||||||||||| || || |||||||||||| ||||| || ||||||||||||| ||    
T  41907523 tatccgatccaagaatcgactaatctgg-gggaccaatcccaccacccacttgcgggggccacgtttaaagccagagcaacctctgtatggacttagccc 41907621  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    || | |||||||||||||| |||||||||||    
T  41907622 actgaaattggcaccagagagaatcgaacct 41907652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 407
Target Start/End: Complemental strand, 27009552 - 27009411
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccactt-gc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||| ||||||| ||||||||||| || |||||||||| || |  |||||| || | |||||||||||||| || |||||||| ||||||||||||| |    
T  27009552 tatccaatccaagaatcgactaatttgaggggaccaatcccaccgtccactttgcaggggccccgtttaaagtcagagcaagctctgtatggacttagcc 27009453  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    ||||| |||||||||||||| | ||||||||| | |||||||    
T  27009452 caccgaaattggcaccagaggggatcgaacctgagacctctg 27009411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 27704193 - 27704048
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||| ||| |||| ||||||||||  || |||| ||||| || |||||||||||| ||  || ||||||||||||||||||| | ||||||||||| |||    
T  27704193 tatctgattcaagaatcgactaatctgaggggatcaatcacaccacccacttgcgggggtccatttaaagccaaagcaagctctctatggacttagccca 27704094  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| ||||||||||| ||  |||||||||| | ||||||| |||||    
T  27704093 ccgaaattggcaccaaaggaaatcgaacctgagacctctgtaggag 27704048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 407
Target Start/End: Original strand, 23012517 - 23012657
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| | | || ||||||| ||| |||||||||| || | |||||||| | || |||| |||||||||| |||||||| ||||||||||||| ||    
T  23012517 tatccgatcaatgaattgactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagccagagcaagctctgtatggacttagccc 23012616  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    |||| ||||||||| |||| ||||| ||||||| |||||||    
T  23012617 accgaaattggcactagagggaatcaaacctaagacctctg 23012657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 394
Target Start/End: Complemental strand, 2344491 - 2344364
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | | |||||||| ||  ||||||||||||||||  ||||| ||||||||||||| ||    
T  2344491 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagccaaaaaaagctctgtatggacttagccc 2344392  T
Q  367 accggaattggcaccagagtgaatcgaa 394  Q
    |||  |||||||||||||  ||||||||    
T  2344391 accaaaattggcaccagaaggaatcgaa 2344364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 16374186 - 16374040
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || |  ||| ||||| ||  |||||||||||||| |||||  | ||||||||||||  ||    
T  16374186 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggtcccgtttaaagccatagcaaattctgtatggacttaaccc 16374087  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| |||||||| || | ||||||| |||||    
T  16374086 accgaaattggcaccagagggaatcgaatctgagacctctggaggag 16374040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 376
Target Start/End: Complemental strand, 3851949 - 3851840
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||| ||||| || | |||||||||| || ||||||||||||||| |||||||| | ||||||||||| ||    
T  3851949 tatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctatatggacttagccc 3851850  T
Q  367 accggaattg 376  Q
    |||| |||||    
T  3851849 accgaaattg 3851840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 385
Target Start/End: Original strand, 33137826 - 33137951
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    ||||| ||||||||||| ||| |||||||||||||| ||||||||| ||| | |||||||||  |||||| |||||||| | ||| |||| |||||||||    
T  33137826 aaactcgatatccgatctaagaatcgactaattcgaggggaccaatttcaccgcccacttgcagggccccatttaaagctagagcgagctctgtatggac 33137925  T
Q  360 ttagtccaccggaattggcaccagag 385  Q
    |||| ||||   ||||| ||||||||    
T  33137926 ttagcccactaaaattgacaccagag 33137951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 43785308 - 43785436
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg-aggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||  |||||||||| | | ||||||||||||| |  ||||||||| |||||||||||||| ||| || ||||| ||||||||||||||||    
T  43785308 tatccgatccaaaaatcgactaatccaaggggaccaatctcaccgtccacttgcggaggccccgtttaaaaccagagtaagctctgtatggacttagtcc 43785407  T
Q  367 accggaattggcaccagagtgaatcgaac 395  Q
    || | |||| |||| || | |||||||||    
T  43785408 actgaaattagcacaagtgggaatcgaac 43785436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 23330748 - 23330878
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagc-aagctttgtatggacttagtc 365  Q
    |||||||||||||||| |||||||| || ||||||||||| | | ||||||||| |||| ||||||| |||||| ||| ||||| ||||||||||| | |    
T  23330748 tatccgatccaaggattgactaatttgaggggaccaatcttaccgcccacttgcggaggtcccgttttaagccagagcaaagctctgtatggactt-gcc 23330846  T
Q  366 caccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||||||| ||| || ||||||||    
T  23330847 caccgaaattggcaccggagggagtcgaacct 23330878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 22638480 - 22638354
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| | || ||||| || | ||||||||| ||||||||||||||||||| |||||||    | || |||||  ||    
T  22638480 tatccgatccaagaatcgactaattcgaggagatcaatcccaccgcccacttgcggaggccccgtttaaagccagagcaagc----tctgaacttaaccc 22638385  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||| ||||||||| |||||||||||    
T  22638384 accgaaattagcaccagagggaatcgaacct 22638354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 376
Target Start/End: Complemental strand, 31197790 - 31197673
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||| ||||||||||  || |||||||||| || |  ||||||||| || ||||||||||||| | |||||| | ||||||||    
T  31197790 aaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccaccgaccacttgcgggggccccgtttaaagcaagagcaagatctgtatgga 31197691  T
Q  359 cttagtccaccggaattg 376  Q
    |||| ||||||| |||||    
T  31197690 cttaatccaccgaaattg 31197673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 406
Target Start/End: Complemental strand, 27312344 - 27312205
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||||||||  || |||||||||| || | |||||||||| || | |||||||||| || ||  |||| ||||||||||| |  |    
T  27312344 tatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagtcagaggtagctctgtatggacttggcac 27312245  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    | || ||||||||| |||| ||||||||||| ||||||||    
T  27312244 atcgaaattggcactagagggaatcgaacctgaaacctct 27312205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 362
Target Start/End: Original strand, 31712911 - 31713006
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcga-ggccccgtttaaagccaaagcaagctttgtatggactta 362  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||||| || |||| ||||||||| || |||| |||||||||||||    
T  31712911 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgagggtcccgcttaaagccagagtaagcgttgtatggactta 31713006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 42863719 - 42863660
Alignment:
Q  58 agtgtccatcattcctctgtttatgcacaatccaagcttccttaattttaaaattactag 117  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  42863719 agtgaccatcattcctctatttatgcacaatctaagcttccttaattttaaaatcactag 42863660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 413
Target Start/End: Original strand, 14199719 - 14199821
Alignment:
Q  311 cacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaag 410  Q
    |||||||||||| |||||||||||||| || |||||||| | ||| ||||||| |||||  ||||||||  |||| ||||||||||| | ||||||| ||    
T  14199719 cacccacttgcggggccccgtttaaaggcagagcaagctctatatagacttagcccaccaaaattggcattagagggaatcgaacctgagacctctggag 14199818  T
Q  411 gag 413  Q
    |||    
T  14199819 gag 14199821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 397
Target Start/End: Complemental strand, 42814992 - 42814926
Alignment:
Q  331 tttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||||| || |||||||||||||||||||||| |||||| ||||| |||||||| |||||||||||    
T  42814992 tttaaagtcagagcaagctttgtatggacttagcccaccgaaattgacaccagagggaatcgaacct 42814926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 32471190 - 32471295
Alignment:
Q  6 gagtagcaaagggagagaggagagacttcaccaatattcttcctatccct----taagtgtccatcattcctctgtttatgcacaatccaagcttcctta 101  Q
    ||||| |||||||||||||||||||||||| |||| |||||| || |||     | ||||  ||||||| |||| ||||||||||||||||||||||||     
T  32471190 gagtaccaaagggagagaggagagacttcatcaattttcttcataacccggccctcagtgatcatcatttctctatttatgcacaatccaagcttccttg 32471289  T
Q  102 atttta 107  Q
    ||||||    
T  32471290 atttta 32471295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 413
Target Start/End: Original strand, 7799900 - 7799987
Alignment:
Q  326 ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||| |||||||| | ||||||||||  |||| | |||||||||||||| ||||||||||| | ||||||| |||||    
T  7799900 ccccatttaaagccatagcaagctctctatggacttaacccactgaaattggcaccagagggaatcgaacctgagacctctggaggag 7799987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 395
Target Start/End: Original strand, 9718053 - 9718124
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaac 395  Q
    ||||||||||||||||| |||||||| | ||||||||||| ||| || ||||| |||||||| |||||||||    
T  9718053 ggccccgtttaaagccagagcaagctctctatggacttagcccatcgaaattgacaccagagggaatcgaac 9718124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 380
Target Start/End: Complemental strand, 21373872 - 21373789
Alignment:
Q  298 ggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcac 380  Q
    |||||||||||| |  ||||||||| || ||||||||||||||| |||||||| ||||| ||||||| |||||| |||||||||    
T  21373872 ggaccaatctcaccgtccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagcccaccgaaattggcac 21373789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 406
Target Start/End: Original strand, 22643343 - 22643490
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| |||| |||| ||| ||||| |||| ||| ||||| |||| || |  |||||||||||| | |||||||||| || |||||||| ||||||||    
T  22643343 aaacttggtatctgatcaaagaatcgattaatccgaggggactaatcacaccggccacttgcgagggctccgtttaaagtcagagcaagctctgtatgga 22643442  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    ||||| | |||| ||||| || |||||  |||||||| ||| ||||||    
T  22643443 cttagcctaccgaaattgacatcagaggaaatcgaacataagacctct 22643490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 397
Target Start/End: Complemental strand, 28647169 - 28647031
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttg-cgaggccccgtttaaagccaaagc-aagctttgtatgg 357  Q
    ||||| |||||||||||||||||  ||||||||||| || ||||||| || | ||||||||  | |||||||||  |||||| ||| || || ||||| |    
T  28647169 aaactcgatatccgatccaaggacagactaattcgagggaaccaatcccaccgcccacttgtgggggccccgttataagccagagcaaaactctgtattg 28647070  T
Q  358 acttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||| | |||||| |||||||||||||| |||||||||||    
T  28647069 actt-gcccaccgaaattggcaccagagggaatcgaacct 28647031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 9684014 - 9683895
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||||||| ||||| |||| ||| |||||| |||  | | |||||||| | || ||||||||||||||| || |||||  |||||||||||| ||||||    
T  9684014 cgatccaagaatcgattaatccgaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcggtatggacttagcccaccg 9683915  T
Q  371 gaattggcaccagagtgaat 390  Q
     ||||||||| |||| ||||    
T  9683914 aaattggcactagagggaat 9683895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 13332495 - 13332562
Alignment:
Q  330 gtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||||||||| || ||||| ||||||||||||| |||||| ||||||| |||||| |||||| ||||    
T  13332495 gtttaaagccagagtaagctctgtatggacttagcccaccgaaattggctccagagggaatcgtacct 13332562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 406
Target Start/End: Complemental strand, 19421423 - 19421284
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||| ||| |||| |||||||||| ||| | |||||||| || | |||||||| | | ||||| ||||||| || |||||||| ||||||||||||| ||    
T  19421423 tatctgattcaagaatcgactaatccgaggagaccaatcccaccgcccacttgtgggcgccccatttaaagtcagagcaagctctgtatggacttagccc 19421324  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    | || ||||| |||||||   |||||||||| | ||||||    
T  19421323 atcgaaattgacaccagaagaaatcgaacctgagacctct 19421284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 379
Target Start/End: Original strand, 36772369 - 36772424
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggca 379  Q
    ||||||||||||||||| |||||||| |||||| |||||| |||||| ||||||||    
T  36772369 ggccccgtttaaagccagagcaagctctgtatgaacttagcccaccgaaattggca 36772424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 42913522 - 42913637
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| ||| |||||| ||| |||||||||| || |  ||||||||| || ||||||||||||||| |||||| |  |||||||||||  ||    
T  42913522 tatccgatctaagaatcaactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagttccgtatggacttatccc 42913621  T
Q  367 accggaattggcacca 382  Q
    | || |||||||||||    
T  42913622 atcgaaattggcacca 42913637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 37056394 - 37056269
Alignment:
Q  271 ccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    |||||||||||| ||||| ||||||||||||||||| ||   |||||||||| |||||||||  |||||| |||      ||||||||||| ||||| ||    
T  37056394 ccgatccaaggaccgactgattcgatgggaccaatcccacagcccacttgcg-ggccccgttctaagccagagc------tgtatggactt-gtccatcg 37056303  T
Q  371 gaattggcaccagagtgaatcgaacctaaaacct 404  Q
     ||||||||||||||  ||||||| || ||||||    
T  37056302 aaattggcaccagaggaaatcgaatctcaaacct 37056269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 358
Target Start/End: Original strand, 8943410 - 8943502
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||||||||| |||||||||||| | |||||||||| || | |||||||||  | || |||||||||| ||| | |||||| ||||||||    
T  8943410 tatccgatccaagaatcgactaattcaaggggaccaatcacaccgcccacttgcgggggggcccgtttaaaaccagaccaagctctgtatgga 8943502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 399
Target Start/End: Original strand, 8435769 - 8435836
Alignment:
Q  332 ttaaagccaaagcaa-gctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaa 399  Q
    ||||||||||| ||| ||||||||||||||| | |||||| ||||||||||||||  ||||||||||||    
T  8435769 ttaaagccaaaacaaagctttgtatggactt-gcccaccgaaattggcaccagaggaaatcgaacctaa 8435836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 24934737 - 24934785
Alignment:
Q  198 ttgataagaagtttagagtatcaactttatcttaaaaattgtgtattca 246  Q
    ||||||||||||||| |||| ||||||||||||| |||||||| |||||    
T  24934737 ttgataagaagtttaaagtagcaactttatcttagaaattgtgcattca 24934785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 6491738 - 6491675
Alignment:
Q  328 ccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatc 391  Q
    |||||||||||||||||||||| |||||| | |||| ||| || ||||| |||||||| |||||    
T  6491738 ccgtttaaagccaaagcaagctctgtatgaatttagcccatcgaaattgacaccagagggaatc 6491675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 21574111 - 21574152
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctca 309  Q
    ||||||||||||||| |||||||| ||| |||||||||||||    
T  21574111 tatccgatccaaggaccgactaatccgaggggaccaatctca 21574152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 39773277 - 39773225
Alignment:
Q  84 acaatccaagcttccttaattttaaaattactagtcacatgtccatttatctc 136  Q
    ||||| ||||||||||||||||||  || ||||| ||||||||||||| ||||    
T  39773277 acaattcaagcttccttaattttaggatcactagccacatgtccatttttctc 39773225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 27528804 - 27528950
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| | |||||||||| || |||||| |||||||| |||||||| ||||||||||||| ||    
T  27528804 tatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagcaagctctgtatggacttagccc 27528903  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  27528904 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 27528950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 34723987 - 34723857
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| |||  ||||||||| || |||||||||||| || ||||||||||||||| |||||||||||||||||||||| ||    
T  34723987 tatccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctttgtatggacttagccc 34723888  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  34723887 accgaaattggcaccagagggaatcgaacct 34723857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 34844767 - 34844913
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  34844767 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 34844866  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  34844867 accgaaattggcaccagagagaatcgaacctgagacctctggaggag 34844913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 268 - 406
Target Start/End: Original strand, 40058861 - 40059000
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  40058861 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 40058960  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    |||| |||||||||||||| ||||||||||| | ||||||    
T  40058961 accgaaattggcaccagagagaatcgaacctgagacctct 40059000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 52983807 - 52983661
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  52983807 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 52983708  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    || | |||||||||||||| ||||||||||| | ||||||| |||||    
T  52983707 actgaaattggcaccagagggaatcgaacctgagacctctggaggag 52983661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 265 - 397
Target Start/End: Original strand, 9517647 - 9517780
Alignment:
Q  265 tgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttag 363  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||| ||||||| |||| || |||||||||||| || |||||||| |||||||||||||    
T  9517647 tgatatccgatccaagaatcgactaatccgaggggaccaatctcaccacccacctgcgggggccccgtttaaagtcagagcaagctctgtatggacttag 9517746  T
Q  364 tccaccggaattggcaccagagtgaatcgaacct 397  Q
     |||| | |||||||||||||| |||||||||||    
T  9517747 cccactgaaattggcaccagagagaatcgaacct 9517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 49288045 - 49287900
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||| |||||||| |||||||||| ||| ||||||||||||| | |||||||||| |  |||||||||||||| |||||  ||||||||||||||| |||    
T  49288045 tatctgatccaagaatcgactaatccgaggggaccaatctcagcgcccacttgcgggagcccgtttaaagccatagcaaattttgtatggacttagccca 49287946  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  49287945 ccgaaattggcaccagagagaatcgaacctgagacctctggaggag 49287900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 260 - 413
Target Start/End: Original strand, 33696280 - 33696434
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||| || ||||||| |||  |||||||||||| | |||||||||| || |||| |||||||||| |||||||| ||||||||    
T  33696280 aaactcgatatccgatccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatgga 33696379  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||| |||||||||||||| |||| |||||| | ||||||| |||||    
T  33696380 cttagcccaccgaaattggcaccagagggaattgaacctgagacctctggaggag 33696434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 397
Target Start/End: Complemental strand, 20566546 - 20566408
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||| ||||||||||  || |||||||||| || | |||||||||| || | ||||||||||||| |||||||| ||||||||    
T  20566546 aaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccagcgcccacttgcgggggctccgtttaaagccagagcaagctctgtatgga 20566447  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||| | |||||| |||||||||||||| |||||||||||    
T  20566446 ctttgcccaccgaaattggcaccagagggaatcgaacct 20566408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 5609211 - 5609341
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||| ||||| || |  ||||||||| || |||| |||||||||| |||||||| ||||||||||||| ||    
T  5609211 tatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagccc 5609310  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  5609311 accgaaattggcaccagagagaatcgaacct 5609341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 32986385 - 32986239
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||| | ||| |||||||||| || | |||||||||| || |||| ||||||| || |||||||| ||||||||||||| ||    
T  32986385 tatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctctgtatggacttagccc 32986286  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| |||| |||||| | ||||||| |||||    
T  32986285 accgaaattggcaccagagggaattgaacctgagacctctggaggag 32986239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 45787713 - 45787843
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||||||||| || |  ||||||||| || ||| ||||||||||| |||||||| ||||||||||||| ||    
T  45787713 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagccc 45787812  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    || | |||||||| ||||| |||||||||||    
T  45787813 actgaaattggcatcagagggaatcgaacct 45787843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 324 - 413
Target Start/End: Complemental strand, 33992757 - 33992668
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||| |||||    
T  33992757 ggccccgtttaaagccagagcaagctatgtatggacttagcccaccgaaattggcaccagagagaatcgaacctaagacctctggaggag 33992668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 25852403 - 25852272
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    |||||| |||||| | |||||||| ||| |||||||||| |||  |||||||||||||  |||  |||||||||| |||||||| ||||||||||||| |    
T  25852403 tatccggtccaagaaccgactaatccgaggggaccaatcccattgcccacttgcgagggtcccgttttaaagccagagcaagctctgtatggacttagcc 25852304  T
Q  366 caccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||||||||||| |||||||||||    
T  25852303 caccgaaattggcaccagagggaatcgaacct 25852272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 395
Target Start/End: Complemental strand, 44343702 - 44343574
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| |||||||||||||| |||||||||| || | |||||||||| | ||||||||||||| || |||||||| ||||||||||||| ||    
T  44343702 tatccgattcaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagtcagagcaagctctgtatggacttagccc 44343603  T
Q  367 accggaattggcaccagagtgaatcgaac 395  Q
    |||  |||| ||||||||| |||||||||    
T  44343602 accaaaattagcaccagagggaatcgaac 44343574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 20077993 - 20078139
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| || || |||| || | ||||||| || || ||||||||||||||| |||||||| ||||||||||||| ||    
T  20077993 tatccgatccaagaatcgactaatccgagggaactaatcccaccgcccacttacgggggccccgtttaaagccagagcaagctctgtatggacttagccc 20078092  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||| | ||||| ||||| | ||||||| |||||    
T  20078093 accgaaattggcaccagtgggaatcaaacctgagacctctggaggag 20078139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 397
Target Start/End: Complemental strand, 32990619 - 32990493
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||||||| |||||||| | ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||||||    
T  32990619 cgatccaagaatcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccg 32990520  T
Q  371 gaattggcaccagagtgaatcgaacct 397  Q
     ||||||||| | || |||||||||||    
T  32990519 aaattggcactaaagggaatcgaacct 32990493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 19660541 - 19660687
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||| ||||| || | |||||||||| || ||| ||||||||||| |||||||| ||||||||||||  ||    
T  19660541 tatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttatccc 19660640  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||| ||| ||||| ||||| ||||| | ||||||| |||||    
T  19660641 accgaaatttgcatcagagagaatcaaacctgagacctctggaggag 19660687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 54127351 - 54127481
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||| |||||| | |||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||| ||||||| ||    
T  54127351 tatccggtccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagccc 54127450  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||||||| |||| |||| ||||||    
T  54127451 accgaaattggcacaagagggaattgaacct 54127481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 394
Target Start/End: Original strand, 13771491 - 13771619
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgag-gccccgtttaaagccaaagca-agctttgtatggacttagtc 365  Q
    ||||||||||||| | |||||||||  | |||||||||||||||| ||||||||| | |||||||||||||||| |||| ||||| |||||||||||| |    
T  13771491 tatccgatccaagaaccgactaattataggggaccaatctcatcatccacttgcgggagccccgtttaaagccagagcatagcttcgtatggacttagcc 13771590  T
Q  366 caccggaattggcaccagagtgaatcgaa 394  Q
    |||||  |||| || ||||| ||||||||    
T  13771591 caccgagattgacatcagagggaatcgaa 13771619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 32942497 - 32942409
Alignment:
Q  328 ccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggagtaa 416  Q
    ||||||||||||| || ||||| ||||||||||||| |||||| |||||||| ||||| ||||||||||| ||||||||| ||||||||    
T  32942497 ccgtttaaagccagagtaagctctgtatggacttagcccaccgaaattggcatcagagagaatcgaaccttaaacctctggaggagtaa 32942409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 46714581 - 46714434
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| || ||||||| ||| |||||||||| || | |||||||||| || ||||||||||||| |  ||||||| ||||||||||||| ||    
T  46714581 tatccgattcaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcaagggcaagctctgtatggacttagccc 46714482  T
Q  367 accggaattggcaccagagtg-aatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||||||| || | |||||||||| | ||||||| |||||    
T  46714481 accgaaattggcaccaaagggaaatcgaacctgagacctctggaggag 46714434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 18875526 - 18875655
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||| |||||||  || ||||||| ||| |||| ||||| ||  ||||||||| | || |||||||||||||| |||||||| ||||||||||||| |||    
T  18875526 tatctgatccaaaaattgactaatccgaggggatcaatcccactacccacttgtgggggcccgtttaaagccagagcaagctctgtatggacttagccca 18875625  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
    ||| ||||| || ||||| |||||||||||    
T  18875626 ccgaaattgacatcagagggaatcgaacct 18875655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 376
Target Start/End: Original strand, 22488029 - 22488146
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||||||||| ||||||||| || |||| ||||| || | |||| ||||| || ||||||||||||||| | |||||| | ||||||    
T  22488029 aaacttggtatccgatccaaggaccgactaatttgaggggatcaatcccaccgcccatttgcgggggccccgtttaaagccagaacaagctctatatgga 22488128  T
Q  359 cttagtccaccggaattg 376  Q
    |||||||||||| |||||    
T  22488129 cttagtccaccgaaattg 22488146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 385
Target Start/End: Original strand, 55961767 - 55961880
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccgg 371  Q
    |||| |||| ||||| |||| ||| || ||||||| || | |||||||| | |||||||||||||| || |||||||| ||||||||||||| ||||||     
T  55961767 cgattcaagaatcgattaatccgaaggaaccaatcccaccgcccacttgtggggccccgtttaaagtcagagcaagctctgtatggacttagcccaccga 55961866  T
Q  372 aattggcaccagag 385  Q
    ||||||||||||||    
T  55961867 aattggcaccagag 55961880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 35229356 - 35229210
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc--cccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||| |||||||||||||| |||||||||| || | | |||||| | ||   ||||||||||| || |||||||| ||||||||||||| |    
T  35229356 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgctcacttgtggggggacccgtttaaagtcagagcaagctatgtatggacttagcc 35229257  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| ||||||||  |||  ||||||||||| | ||||||| |||||    
T  35229256 caccgaaattggca-tagaaggaatcgaacctgagacctctggaggag 35229210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 397
Target Start/End: Original strand, 36131533 - 36131649
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcac 380  Q
    |||||||||| ||| |||||||||| || | ||||||| || ||  ||||||||||| || |||||||| ||||||||||||| |||||| |||||||||    
T  36131533 atcgactaatccgaggggaccaatcccaccgcccacttacgggggtcccgtttaaagtcatagcaagctctgtatggacttaggccaccgaaattggcac 36131632  T
Q  381 cagagtgaatcgaacct 397  Q
    || || |||||||||||    
T  36131633 catagggaatcgaacct 36131649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 25969512 - 25969639
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||||||| |||| |||||||||||||| |||||||||| || | | ||||| || || |||||||||||||| |||||| | ||||||||||| | |||    
T  25969512 tatccgattcaagaatcgactaattcga-gggaccaatcccaccgctcacttacgggggcccgtttaaagccagagcaagttctgtatggactt-ggcca 25969609  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
    ||| |||||||||||| | ||||| |||||    
T  25969610 ccgaaattggcaccagggggaatccaacct 25969639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 35674807 - 35674880
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||||||||||||| || |||||||| ||||||||||||| |||||| ||||||| |||||| |||||||||||    
T  35674807 ggccccgtttaaaggcagagcaagctctgtatggacttagcccaccgaaattggctccagagggaatcgaacct 35674880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 51535809 - 51535671
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--gaggccccgtttaaagccaaagc---aagctttgtatggactta 362  Q
    ||||||||| ||| |||||||||||||| |||||||||| || | |||||||||  | ||||||||||||||||| |||   ||||| ||||||||||||    
T  51535809 tatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttgctgggggccccgtttaaagccagagctgcaagctctgtatggactta 51535710  T
Q  363 gt----ccaccggaattggcaccagagtgaatcgaacct 397  Q
     |    |||||  |||||||||||||| |||||||||||    
T  51535709 attagcccaccaaaattggcaccagagggaatcgaacct 51535671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 12500127 - 12500213
Alignment:
Q  327 cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||||||||||| |||||||| ||||||||||||| |||  | |||||||||||||| ||||| ||||| | |||| ||||||||    
T  12500127 cccgtttaaagccagagcaagctatgtatggacttagcccattgaaattggcaccagagggaatcaaacctgagacctttgaaggag 12500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 22625154 - 22625228
Alignment:
Q  342 agcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggagtaa 416  Q
    |||||||| ||||||||||||| |||||| ||||||| |||||| ||||||||||| | ||||||| ||||||||    
T  22625154 agcaagctctgtatggacttagcccaccgaaattggctccagagggaatcgaacctgagacctctggaggagtaa 22625228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 413
Target Start/End: Complemental strand, 2351140 - 2351055
Alignment:
Q  328 ccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||  | |||||| |||||||| |||||| |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  2351140 ccgtttaaagccggaacaagctatgtatggatttagtcgaccgaaattggcaccagagggaatcgaacctgagacctctggaggag 2351055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 404
Target Start/End: Complemental strand, 28791310 - 28791166
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagc-aagctttgtatgga 358  Q
    ||||| |||||||||| |||||| ||||||||||||  | |||||||||| | |||||||| |  | |||||||||||||| ||| ||| ||||||| ||    
T  28791310 aaactcgatatccgattcaaggaccgactaattcgaaagaaccaatctcaccgcccacttgtggagacccgtttaaagccagagcaaagttttgtataga 28791211  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacct 404  Q
    ||||  |||||| ||||| ||||||||  ||| |||||||| ||||    
T  28791210 ctta-cccaccgaaattgacaccagaggtaatggaacctaagacct 28791166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 30879175 - 30879320
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    |||| |||||||| ||||| ||||  || || ||||||| || |  ||||||||  | |||| |||||||||| ||||| ||||||||||| |||  |||    
T  30879175 tatctgatccaagaatcgattaatctgagggaaccaatcccaccgtccacttgcaggaccccctttaaagccagagcaaactttgtatggatttaaccca 30879274  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
     || |||||||||||||| ||||| |||||||||||  ||||||||    
T  30879275 tcgaaattggcaccagagggaatcaaacctaaaacccatgaaggag 30879320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 395
Target Start/End: Original strand, 13584320 - 13584391
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaac 395  Q
    ||||||||||||||||| |||||||| | ||||||||||| ||| || ||||| |||||||| |||||||||    
T  13584320 ggccccgtttaaagccagagcaagctctctatggacttagcccatcgaaattgacaccagagggaatcgaac 13584391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 397
Target Start/End: Original strand, 21387488 - 21387624
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||||||  |||||||||| ||| |||||||  | || | |||||||||| ||  |||||||||||||| |||||||| ||||| ||    
T  21387488 aaacttggtatccgatccaataatcgactaatccgaggggacca--cccaccgcccacttgcggggatcccgtttaaagccagagcaagctctgtataga 21387585  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||  ||||| ||| | || |||||||||||    
T  21387586 cttagcccaccaaaattgacactatagggaatcgaacct 21387624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 52494676 - 52494609
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaa 335  Q
    ||||||||||||| |||||||||||||| |||||||||| || | ||||||||| ||| |||||||||    
T  52494676 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcaagggcccgtttaa 52494609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 402
Target Start/End: Complemental strand, 4912114 - 4911975
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagcca----aagcaagctttgtatggactta 362  Q
    |||| |||||||| |||||||||||||  |||| ||||| || ||||||||||| | ||| |||||||||||||    ||||||||| | ||||||| ||    
T  4912114 tatctgatccaagaatcgactaattcggggggatcaatcacaccacccacttgcgggggctccgtttaaagccagagcaagcaagctctatatggacata 4912015  T
Q  363 gtccaccggaattggcaccagagtgaatcgaacctaaaac 402  Q
    | |||||  ||||  |||||||| ||||||||||| ||||    
T  4912014 ggccaccaaaattaacaccagagggaatcgaacctgaaac 4911975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 7093567 - 7093508
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccactt 319  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||| || | |||||||    
T  7093567 aaactcgatatccgatccaaggaccgactaattcgaagggaccaatcccaccgcccactt 7093508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 390
Target Start/End: Complemental strand, 13550392 - 13550273
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    ||||||||| ||||| |||| ||| |||||| |||  | | |||||||| | || ||||||||||||||| || |||||  |||||||||||| ||||||    
T  13550392 cgatccaagaatcgattaatccgaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcggtatggacttagcccaccg 13550293  T
Q  371 gaattggcaccagagtgaat 390  Q
     ||||||||| |||| ||||    
T  13550292 aaattggcactagagggaat 13550273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 413
Target Start/End: Original strand, 13873347 - 13873450
Alignment:
Q  311 cacccacttgcgaggcccc-gtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaa 409  Q
    |||||||||||| || ||| |||| |||| | ||||| || |||||| |||||| | |||| |||||||||||||| ||||||||||| | |||| ||||    
T  13873347 cacccacttgcgggggccctgtttgaagctagagcaaactctgtatgaacttagcctaccgaaattggcaccagagggaatcgaacctgagacctttgaa 13873446  T
Q  410 ggag 413  Q
    ||||    
T  13873447 ggag 13873450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 20527048 - 20527187
Alignment:
Q  273 gatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccgga 372  Q
    |||||||  |||||||||| ||| | ||||||||  | | ||||||| || ||||| ||||||| | ||| |||||| | ||||||||||| |||||| |    
T  20527048 gatccaaaaatcgactaatccgaggagaccaatcctaccgcccacttacggggccctgtttaaaccgaaatcaagctctatatggacttagcccaccgaa 20527147  T
Q  373 attggcaccagagtgaatcgaacctaaaacctctgaagga 412  Q
    |||||| |||||| ||||| ||| | | ||||||| ||||    
T  20527148 attggcgccagagggaatcaaacttgagacctctggagga 20527187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 377
Target Start/End: Complemental strand, 27574506 - 27574396
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| || || |||| ||| |||||||| |||| | ||||||||| | |||||| |||||||||| |||||||| |||||| | |||| |     
T  27574506 tatccgatccaagaattgattaatccgaggggaccaaactcaccgcccacttgcgggggccccttttaaagccagagcaagctctgtatgaatttagcct 27574407  T
Q  367 accggaattgg 377  Q
    |||| ||||||    
T  27574406 accgaaattgg 27574396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 395
Target Start/End: Complemental strand, 34835713 - 34835589
Alignment:
Q  272 cgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtccacc 369  Q
    ||||| ||| |||||||||| ||| ||||||||||||| | |||||||||| ||  |||  |||||||||| |   ||||  |||||||||||| |||||    
T  34835713 cgatctaagaatcgactaatccgaggggaccaatctca-cgcccacttgcggggggccctatttaaagccagacatagctccgtatggacttagcccacc 34835615  T
Q  370 ggaattggcaccagagtgaatcgaac 395  Q
    | ||||| |||||||| |||||||||    
T  34835614 gaaattgacaccagagggaatcgaac 34835589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 43719158 - 43719220
Alignment:
Q  351 tgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||| |||||| |||| |||| |||| ||||||||||| ||||||||| |||||    
T  43719158 tgtatggacttagcccaccgaaattagcactagagagaatcgaacctgaaacctctggaggag 43719220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 4585736 - 4585802
Alignment:
Q  282 atcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagct 349  Q
    |||||||||| |||  ||||||||| || | |||||||||| || |||||||||||||||||||||||    
T  4585736 atcgactaatccgaaaggaccaatc-caccgcccacttgcgggggcccgtttaaagccaaagcaagct 4585802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 7392037 - 7392102
Alignment:
Q  331 tttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||||||||| ||||| || ||||||||||||  |||||| ||||||||||| || |||||||||||    
T  7392037 tttaaagccagagcaaactctgtatggacttaa-ccaccgaaattggcaccatagggaatcgaacct 7392102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 12824588 - 12824550
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatc 306  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  12824588 tatccgatccaagaatcgactaattcgatgagaccaatc 12824550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 246
Target Start/End: Original strand, 44369014 - 44369044
Alignment:
Q  216 tatcaactttatcttaaaaattgtgtattca 246  Q
    |||||||||||||||||||||||||||||||    
T  44369014 tatcaactttatcttaaaaattgtgtattca 44369044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 13781176 - 13781131
Alignment:
Q  266 gatatccgatccaaggatcgactaattcgatgggaccaatctcatc 311  Q
    |||||||||| |||| ||||| |||||||| |||||||||||||||    
T  13781176 gatatccgattcaagaatcgattaattcgaggggaccaatctcatc 13781131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 19456220 - 19456364
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||    
T  19456220 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagccagagcaagctctgtatggacttagccca 19456319  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| |||||||||||||| | ||||||||| | ||||||| |||||    
T  19456320 ccgaaattggcaccagag-ggatcgaacctgagacctctggaggag 19456364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 38684395 - 38684250
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | | |||||||| || |||||||||||||| |||||||| ||||||||||||| |||    
T  38684395 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccagagcaagctctgtatggacttagccca 38684296  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  38684295 ccgaaattggcaccagagggaatcgaacctgagacctctggaggag 38684250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 11926510 - 11926657
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||| |||||||||| ||| |||||||||| || |||||||||||| ||  ||||||||||||||| |||||||| ||||||||||||| |    
T  11926510 tatccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagcaagctctgtatggacttagcc 11926609  T
Q  366 caccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||| |||||||||||||| ||||| ||||| | ||||||| |||||    
T  11926610 caccgaaattggcaccagagggaatctaacctgagacctctggaggag 11926657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 268 - 406
Target Start/End: Original strand, 27498740 - 27498879
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  27498740 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctatgtatggacttagccc 27498839  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
    |||| |||||||||||||| ||||||||||| | ||||||    
T  27498840 accgaaattggcaccagagggaatcgaacctgagacctct 27498879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 11464917 - 11465046
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| |||||||||||||| |||||||||| || |||||||||||| ||||||||||||||||| || ||||| |||||| |||||| |||    
T  11464917 tatccgatccaagaatcgactaattcgaggggaccaatcccaccacccacttgcggggccccgtttaaagccagagtaagctctgtatgaacttagccca 11465016  T
Q  368 ccggaattggcaccagagtgaatcgaacct 397  Q
    ||  ||||||||||||||  ||||||||||    
T  11465017 ccaaaattggcaccagaggaaatcgaacct 11465046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 260 - 397
Target Start/End: Original strand, 6014281 - 6014419
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||||||||||||| |||||||||||||| ||||| ||||||| | |||||||||| || ||||||||||||||| |||||||| ||||||||    
T  6014281 aaactcgatatccgatccaagaatcgactaattcgaggggactaatctcaccgcccacttgcgtggaccccgtttaaagccagagcaagctctgtatgga 6014380  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||  |||||| |||||||||||||   ||||||||||    
T  6014381 cttaacccaccgaaattggcaccagaagtaatcgaacct 6014419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 8484670 - 8484816
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| |||||| |||||| ||    
T  8484670 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgaacttagccc 8484769  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||| ||||| | ||||||| |||||    
T  8484770 accgaaattggcaccagagggaatcaaacctgagacctctggaggag 8484816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 30486016 - 30485870
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccc-cgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| || ||||||| ||| |||||||||| || | |||||||||| || |  |||||||||||| |||||||| ||||||||||||| ||    
T  30486016 tatccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagcaagctctgtatggacttagccc 30485917  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||| |||||||||||||||||||| | |||||||||||||    
T  30485916 accgaaattgacaccagagtgaatcgaacctgagacctctgaaggag 30485870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 32059449 - 32059579
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  32059449 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 32059548  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||  |||||||||||    
T  32059549 accgaaattggcaccagaaggaatcgaacct 32059579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 15641115 - 15641260
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  15641115 tatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 15641213  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||| |||||| ||||||||||| | ||||||| |||||    
T  15641214 accgaaattggctccagagggaatcgaacctgagacctctggaggag 15641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 18207395 - 18207249
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccc-cgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || || |||||||||||| | |||||| ||||||||||||| ||    
T  18207395 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaacaagctctgtatggacttagccc 18207296  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||| ||| ||||||||||| | ||||||| |||||    
T  18207295 accgaaattggcaccggagggaatcgaacctgagacctctggaggag 18207249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 27487563 - 27487679
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg--ccccgtttaaagccaaagcaagctttgtatggacttagtc 365  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| |||  ||||||||||||| | |||||||| |||||||||||||||    
T  27487563 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaagggcccccgtttaaagctagagcaagctctgtatggacttagtc 27487662  T
Q  366 caccggaattggcacca 382  Q
    ||||| |||||||||||    
T  27487663 caccgaaattggcacca 27487679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 395
Target Start/End: Original strand, 31287955 - 31288083
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||| |||||| | |||||||||||| | |||||||| || | |||||||||| || |||||||||||| ||||||||||||||||||||||||  ||    
T  31287955 tatccggtccaagaaccgactaattcgaggagaccaatcccaccgcccacttgcgggggccccgtttaaagtcaaagcaagctttgtatggacttaaccc 31288054  T
Q  367 accggaattggcaccagagtgaatcgaac 395  Q
    |||| ||||||||||| || |||||||||    
T  31288055 accgaaattggcaccaaagggaatcgaac 31288083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 390
Target Start/End: Complemental strand, 5049332 - 5049202
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||||| || |  ||| ||||| || |||||||||||||| |||||||| |||||| ||    
T  5049332 aaacttggtattcgatccaagaatcgactaattcgatgggaccaatcccaccgtccatttgcgggggcccgtttaaagccagagcaagctctgtatgaac 5049233  T
Q  360 ttagtccaccggaattggcaccagagtgaat 390  Q
    |||| ||| || |||||| ||||||| ||||    
T  5049232 ttagaccatcgaaattggtaccagagggaat 5049202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 7085635 - 7085781
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| |||||||||| ||| |||||||||| || | |||||||||| || |||||||||||| || |||||||| ||||||||||||| ||    
T  7085635 tatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagtcagagcaagctctgtatggacttagccc 7085734  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||| ||| |||| ||||||||||  | ||||||| |||||    
T  7085735 accgaaattgacactagagggaatcgaaccggagacctctggaggag 7085781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 397
Target Start/End: Original strand, 10869566 - 10869704
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg-aggccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||||||| | |||||||| ||| |||||||||| || | |||||||||| ||||||| |||||||||| ||||||||  || ||||    
T  10869566 aaacttggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcggaggccccatttaaagccagagcaagctcagtgtgga 10869665  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||| |||||| ||||||  |||||||||||    
T  10869666 cttagcccaccgaaattggaaccagatggaatcgaacct 10869704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 34310330 - 34310184
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||| |||||||| |||||||||| || |  ||||||  | ||  |||||||||||||| |||||||| ||||||||||||| ||    
T  34310330 tatccgatccaagaatcgattaattcgaggggaccaatcccaccgtccacttatgggggtcccgtttaaagccagagcaagctctgtatggacttagccc 34310231  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||  |||||||||||||| ||||||||||| | ||||||| |||||    
T  34310230 accaaaattggcaccagagggaatcgaacctgagacctctggaggag 34310184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 395
Target Start/End: Complemental strand, 4603965 - 4603837
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||||| |||||||| ||| |||||||||| || |  |||||||| | ||||||||||||||||| ||| |||| ||||||||||||| ||    
T  4603965 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagccagagcgagctctgtatggacttagccc 4603866  T
Q  367 accggaattggcaccagagtgaatcgaac 395  Q
    | || |||||||||||||  |||||||||    
T  4603865 atcgaaattggcaccagaaggaatcgaac 4603837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 385
Target Start/End: Complemental strand, 35425201 - 35425083
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| |||  ||||||||| || | |||||||||| || ||||||||||||||| ||| |||| ||||||||||||| ||    
T  35425201 tatccgatccaagaatcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcgagctctgtatggacttagccc 35425102  T
Q  367 accggaattggcaccagag 385  Q
    |||| ||||||||| ||||    
T  35425101 accgaaattggcactagag 35425083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 33709512 - 33709656
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||| | ||  |||||||||||||| |||   || ||||||||||||| ||    
T  33709512 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggtcccgtttaaagccagagct--ctctgtatggacttagccc 33709609  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||| | | ||||||| |||||    
T  33709610 accgaaattggcaccagagggaatcgaacttgagacctctggaggag 33709656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 13038464 - 13038609
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||| ||||| || | ||||||||| | ||||||||||||||||| | |  ||| |||||| |||||| ||    
T  13038464 tatccgatccaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccata-cttgctctgtatgaacttagccc 13038562  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | |  |||||||||||||| ||||||||||| | ||||||| |||||    
T  13038563 atcaaaattggcaccagagggaatcgaacctgagacctctggaggag 13038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 260 - 379
Target Start/End: Original strand, 23270523 - 23270643
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggcc-ccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||| ||||||| ||| |||||| ||| |||||||||| || |  ||| ||||| || | |||||||||||||||||||||| ||||||||    
T  23270523 aaacttggtatccaatccaagaatcaactaatccgaggggaccaatcccaccgtccatttgcgggggctccgtttaaagccaaagcaagctctgtatgga 23270622  T
Q  359 cttagtccaccggaattggca 379  Q
    ||||| |||||| ||||||||    
T  23270623 cttagcccaccgaaattggca 23270643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 37495242 - 37495089
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc--------gaggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||        | ||   |||||||||||| |||||||| |||||||||    
T  37495242 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggcgggggggggggcgtttaaagccagagcaagctctgtatggac 37495143  T
Q  360 ttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||  |||||||||||||| ||||||||||| | ||||||| |||||    
T  37495142 ttagcccaccaaaattggcaccagagggaatcgaacctgagacctctggaggag 37495089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 330 - 413
Target Start/End: Complemental strand, 25587057 - 25586974
Alignment:
Q  330 gtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||||  |||||||||| | ||||||| |||||    
T  25587057 gtttaaagccagagcaagctctgtatggacttagcccaccgaaattggcaccagaggaaatcgaacctgagacctctggaggag 25586974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 407
Target Start/End: Complemental strand, 42193675 - 42193533
Alignment:
Q  264 ttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttag 363  Q
    |||||||| |||||||| |||||||||| |||  ||||||| | || | |||||||||| || ||  |||||||||||||||| || ||||| |||||||    
T  42193675 ttgatatctgatccaagaatcgactaatccgagaggaccaaccccaccgcccacttgcggggtcca-tttaaagccaaagcaaactctgtatagacttag 42193577  T
Q  364 tccaccggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
     |||||| |||||||| |||||  |||||||||| | |||||||    
T  42193576 cccaccgaaattggcatcagaggaaatcgaacctgagacctctg 42193533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 397
Target Start/End: Complemental strand, 15931201 - 15931117
Alignment:
Q  313 cccacttgcgag-gccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    |||||||||||| |||| ||||||||||| |||| ||| ||||||||||||| |||||| |||||||||||||| |||||||||||    
T  15931201 cccacttgcgagagccctgtttaaagccagagcaggctctgtatggacttag-ccaccgaaattggcaccagagggaatcgaacct 15931117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 19145421 - 19145549
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagc-aagctttgtatggacttagtcc 366  Q
    ||||||||||||| | | |||||| ||| |||||||||| || | |||||||||| ||  || |||||||||| ||| ||||| ||||||||||| | ||    
T  19145421 tatccgatccaagaaccaactaatccgaggggaccaatcccaccgcccacttgcgggggaccatttaaagccagagcaaagctctgtatggactt-gccc 19145519  T
Q  367 accggaattggcaccagagtgaatcgaacc 396  Q
    |||| |||||||||||||| ||||||||||    
T  19145520 accgaaattggcaccagagggaatcgaacc 19145549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 396
Target Start/End: Original strand, 26009265 - 26009402
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||| ||||| |||| |||| | |||||||| ||| ||||| |||| ||  ||||||||||| || ||||||||||||||| || ||||| || |||||    
T  26009265 aaactcgatattcgattcaagaaccgactaatccgaggggactaatcccactacccacttgcgggggccccgtttaaagccagagtaagctctgcatgga 26009364  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacc 396  Q
    ||||| |||| | ||||||||||| || ||||||||||    
T  26009365 cttagcccactgaaattggcaccaaagggaatcgaacc 26009402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 349
Target Start/End: Original strand, 41351113 - 41351194
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagct 349  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||||  |||||||||||||||| ||||||||    
T  41351113 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggagccccgtttaaagccagagcaagct 41351194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 13108459 - 13108588
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||||||| |||| ||||| || | ||||||||| | |||||||||||||| || | |  ||| |||||| |||||| ||    
T  13108459 tatccgatccaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaaggcaga-cttgctctgtatgaacttagccc 13108557  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    | |  |||||||||||||| |||||||||||    
T  13108558 atcaaaattggcaccagagggaatcgaacct 13108588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 413
Target Start/End: Original strand, 15971151 - 15971277
Alignment:
Q  288 taattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagt 386  Q
    |||| ||| |||| |||||||| | |||||||||| ||  ||||||||||| || |||||||| ||||||||||||| |||||| ||||| || |||||     
T  15971151 taatccgaggggatcaatctcaccgcccacttgcgggggtcccgtttaaagtcagagcaagctatgtatggacttagcccaccgaaattgacatcagagg 15971250  T
Q  387 gaatcgaacctaaaacctctgaaggag 413  Q
     |||||||||| | ||||||| |||||    
T  15971251 aaatcgaacctgagacctctggaggag 15971277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 21236371 - 21236517
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| ||||||||||  || ||||| |||| || | |||||||||| || |||||||||||| || || || || ||||||||||||| ||    
T  21236371 tatccgattcaagaatcgactaatctgaggggactaatcccaccgcccacttgcgggggccccgtttaaagtcagagaaaactctgtatggacttagccc 21236470  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |  | ||||| ||| |||| |||||||||| || |||||||||||||    
T  21236471 attgaaattgacactagagagaatcgaaccgaagacctctgaaggag 21236517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 384
Target Start/End: Original strand, 25750622 - 25750735
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||||||| ||||||||||  || ||||||||||||| | |||||||| | || ||||||  |||||| |||||||| | ||||||||||  |||    
T  25750622 tatccgatccaagaatcgactaatctgaagggaccaatctcaccccccacttg-ggggtcccgtt--aagccagagcaagctctatatggacttaaccca 25750718  T
Q  368 ccggaattggcaccaga 384  Q
    ||| |||||||||||||    
T  25750719 ccgaaattggcaccaga 25750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 12398457 - 12398587
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||| ||||||| | ||||||||| ||  ||| |||||||| |  ||| ||||| || |||| |||||||||| |||||||| |||||| |||||| ||    
T  12398457 tatccaatccaagaaccgactaatttgagaggatcaatctcaccgtccatttgcgggggccccatttaaagccagagcaagctctgtatgaacttaggcc 12398556  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||| ||||| || |||||||||||    
T  12398557 accgaaattgacaccatagggaatcgaacct 12398587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 376
Target Start/End: Original strand, 9659320 - 9659429
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||| ||||||| ||| |||||| ||| |||||||||| || |  ||||||||| ||  ||| |||||||||| |||||||| ||||||||||||| ||    
T  9659320 tatcccatccaagaatcaactaatccgaagggaccaatcccaccgtccacttgcggggggcccatttaaagccagagcaagctgtgtatggacttagccc 9659419  T
Q  367 accggaattg 376  Q
    |||| |||||    
T  9659420 accgaaattg 9659429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 410
Target Start/End: Complemental strand, 10399957 - 10399818
Alignment:
Q  273 gatccaaggatcgactaattcgatgg-gaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtccaccg 370  Q
    |||||||| |||||||||||||| || |||||||| || |  |||||| || || |||||||||||| || |||| |||  |||||||||||| ||| ||    
T  10399957 gatccaagaatcgactaattcgagggtgaccaatcccaccgtccacttacgggggccccgtttaaagtcagagcatgctccgtatggacttagcccatcg 10399858  T
Q  371 gaattggcaccagagtgaatcgaacctaaaacctctgaag 410  Q
     ||||||| |||||| ||||| ||||| ||| || |||||    
T  10399857 aaattggcgccagagagaatcaaacctgaaatctttgaag 10399818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 24158175 - 24158305
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaag-caagctttgtatggacttagtc 365  Q
    |||||||| |||||| ||||||||  || ||||||||||||| | ||||||||| |||||||||||  |||||| ||  ||||| ||||||||||||  |    
T  24158175 tatccgattcaaggaccgactaatctgaggggaccaatctcaccgcccacttgcagaggccccgttctaagccagagtaaagctatgtatggactta-cc 24158273  T
Q  366 caccggaattggcaccagagtgaatcgaacct 397  Q
    || || ||||| |||||||  |||||||||||    
T  24158274 catcgaaattgacaccagaaggaatcgaacct 24158305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 406
Target Start/End: Complemental strand, 36955006 - 36954867
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||||||||||  || ||||| |||| ||    ||||||||| ||  ||| |||||||||||||||| || |||||||||||||  |    
T  36955006 tatccgatccaagaatcgactaatatgaggggactaatcccacagtccacttgcggggggcccatttaaagccaaagcaaactctgtatggacttagcac 36954907  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctct 406  Q
     ||| |||| | ||||||| ||||||||||| | ||||||    
T  36954906 gccgaaattagaaccagagggaatcgaacctgagacctct 36954867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 382
Target Start/End: Original strand, 930487 - 930608
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggac 359  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||| ||    |||||||||||| |  |||  |||||  |||||||| ||||| ||     
T  930487 aaactcgatatccgatccaaggaccgactaatccgaggggaccaatcacactgtccacttgcgagggcttgttctaagccggagcaagctatgtat-gaa 930585  T
Q  360 ttagtccaccggaattggcacca 382  Q
    || |||||||| |||||||||||    
T  930586 tttgtccaccgaaattggcacca 930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 7151491 - 7151437
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcg 322  Q
    ||||||||||||| |||||||||||| | ||||||||| ||||||||| ||||||    
T  7151491 tatccgatccaagaatcgactaattctaggggaccaatttcatcacccgcttgcg 7151437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 22693123 - 22693054
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaa 336  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | ||||||||| | |||||||||||||    
T  22693123 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaa 22693054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 34049942 - 34049897
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccacc 369  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||    
T  34049942 ggccccgtttaaagccagagcaagctctgtatggacttagcccacc 34049897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 41568907 - 41569007
Alignment:
Q  297 gggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacc 396  Q
    |||||||||| || |||||| ||||| ||  || ||||||| |||| |||  | |||||||||||||||||||| ||||| ||| ||||  |||||||||    
T  41568907 gggaccaatcccaccacccatttgcggggttccatttaaagacaaaacaaattctgtatggacttagtccaccgaaattgacacaagaggaaatcgaacc 41569006  T
Q  397 t 397  Q
    |    
T  41569007 t 41569007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 362
Target Start/End: Original strand, 13659254 - 13659349
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggactta 362  Q
    ||||||||||||| ||||| |||| ||| |||| ||||| || | ||||||||| | || ||||||||||| ||||||||| | | ||||||||||    
T  13659254 tatccgatccaagaatcgattaatccgaggggatcaatcccaccgcccacttgcgggggtcccgtttaaagtcaaagcaagttctctatggactta 13659349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 34272358 - 34272303
Alignment:
Q  77 tttatgcacaatccaagcttccttaattttaaaattactagtcacatgtccattta 132  Q
    ||||||||||||| |||| ||||| ||||||  || ||||||||||||||||||||    
T  34272358 tttatgcacaatctaagcatccttgattttaggatcactagtcacatgtccattta 34272303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 413
Target Start/End: Original strand, 38631054 - 38631116
Alignment:
Q  351 tgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||||||||||| ||| || |||||||||||||| |||||||| || | ||||||| |||||    
T  38631054 tgtatggacttagcccatcgaaattggcaccagagggaatcgaatctgagacctctggaggag 38631116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 1827616 - 1827685
Alignment:
Q  344 caagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||| ||||||||||||  |||||| |||||| | ||||| ||||||||||| | ||||||| |||||    
T  1827616 caagctctgtatggacttaacccaccgaaattggtatcagagggaatcgaacctgagacctctggaggag 1827685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 21377258 - 21377323
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtt 332  Q
    |||||||||||| || |||||||| | | | ||||||||||| ||||||||||| |||||||||||    
T  21377258 tatccgatccaaagaccgactaatccaaagagaccaatctcaccacccacttgcagaggccccgtt 21377323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 347
Target Start/End: Complemental strand, 22392876 - 22392796
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaag 347  Q
    ||||||||||||  ||||||||||  || |||||||||  || | |||||||||| || ||||||||||||||| ||||||    
T  22392876 tatccgatccaaaaatcgactaatctgaggggaccaattccaccgcccacttgcgggggccccgtttaaagccagagcaag 22392796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 268 - 397
Target Start/End: Original strand, 5091 - 5221
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| |||||||||| ||| |||||||||| || | |||| ||||| || ||||||||||||||| |||||||| ||||||||||||| ||    
T  5091 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 5190  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| |||||||||||||| |||||||||||    
T  5191 accgaaattggcaccagagggaatcgaacct 5221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 260 - 397
Target Start/End: Original strand, 7310 - 7448
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| || ||||| ||||||||    
T  7310 aaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagaaagctctgtatgga 7409  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacct 397  Q
    ||||| |||||| |||||||||| ||| |||||||||||    
T  7410 cttagcccaccgaaattggcaccggagggaatcgaacct 7448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 161997 - 161851
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||| |||||||| |||||||||| ||| |||||||||| || | |||||||||| || |||| || ||||||| |||||||| ||||||||||||| ||    
T  161997 tatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagcaagctctgtatggacttagccc 161898  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| | ||||||| |||||    
T  161897 accgaaattggcaccagagggaatcgaacctgagacctctggaggag 161851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 1066 - 1211
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||||||| |||||||||| || |  ||||||||| || |||| |||||||||| |||||||| ||||||||||||| ||    
T  1066 tatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagccc 1164  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||| |||||| ||||||||||| | ||||||| |||||    
T  1165 accgaaattggctccagagggaatcgaacctgagacctctggaggag 1211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 9309 - 9454
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||||||| |||||||||| || |  ||||||||| || |||| |||||||||| |||||||| ||||||||||||| ||    
T  9309 tatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagccc 9407  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| ||||||| |||||| ||||||||||| | ||||||| |||||    
T  9408 accgaaattggctccagagggaatcgaacctgagacctctggaggag 9454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 413
Target Start/End: Original strand, 12027 - 12155
Alignment:
Q  285 gactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccaga 384  Q
    ||||||||||| |||||||||| || |  ||||||| | |||||| |||||||||| |||||||| ||||||||||||| |||||| ||||||| |||||    
T  12027 gactaattcgaggggaccaatcccaccgtccacttgtggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattggctccaga 12126  T
Q  385 gtgaatcgaacctaaaacctctgaaggag 413  Q
    |  |||||||||| | ||||||| |||||    
T  12127 ggaaatcgaacctgagacctctggaggag 12155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 39280 - 39134
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||| |||||||| |||||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| | |||| | ||||||||| ||| ||    
T  39280 tatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagaacaagttctgtatggacatagccc 39181  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||| | | ||||||| |||||    
T  39180 accgaaattggcaccagagggaatcgaacttgagacctctggaggag 39134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 10704 - 10848
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccccgtttaaagccaaagcaagctttgtatggacttagtcca 367  Q
    ||||||||| ||| || ||||||||||| |||||||||| || |  ||||||| | |||||| |||||||||| |||||||| ||||||||||||| |||    
T  10704 tatccgatc-aagaattgactaattcgaggggaccaatcccaccgtccacttgtggggccccatttaaagccagagcaagctctgtatggacttagccca 10802  T
Q  368 ccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||| ||||||| ||||||  |||||||||| | ||||||| |||||    
T  10803 ccgaaattggctccagaggaaatcgaacctgagacctctggaggag 10848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 41654 - 41799
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||| ||| |||||||||| |||  ||||||||| | ||||||||||||||||| |||||||| |||||||||||||  |    
T  41654 tatccgatc-aagaatcgactaatccgaggggaccaatcccattgcccacttgcaggggccccgtttaaagccagagcaagctctgtatggacttagcac 41752  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    | || |||||| || |||| ||||||||||| | ||||||| |||||    
T  41753 aacgaaattggaacaagagggaatcgaacctgagacctctggaggag 41799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Original strand, 52880 - 53026
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    |||||||| |||| |||||||||| |||  |||||||||  | | ||||| |||| || ||||||||||||||| |||||||| |||||||| || | ||    
T  52880 tatccgattcaagaatcgactaatccgagaggaccaatcctaccgcccacctgcgggggccccgtttaaagccagagcaagctctgtatggattttgccc 52979  T
Q  367 accggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||| |||||||||||||| ||||||||||| || |||||| |||||    
T  52980 accgaaattggcaccagagggaatcgaacctgaagcctctggaggag 53026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 397
Target Start/End: Complemental strand, 32475 - 32346
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgaggccc-cgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||| ||| |||||||||| ||| |||||||||| || |||||||||||| || || | |||||||||| |||||||| ||||||||||||| ||    
T  32475 tatccgatc-aagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagcaagctctgtatggacttagccc 32377  T
Q  367 accggaattggcaccagagtgaatcgaacct 397  Q
    |||| ||||||| ||||||  ||||||||||    
T  32376 accgaaattggctccagaggaaatcgaacct 32346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 97391 - 97505
Alignment:
Q  284 cgactaattcgatgggaccaatctcatcacccacttgcgaggc-cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcacca 382  Q
    |||||||| |||  ||||||||| || | |||||||||| ||  ||||||||||| || |||||||| ||||||||||||| |||||| |||||||||||    
T  97391 cgactaatacgagaggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagcaagctctgtatggacttagcccaccgaaattggcacca 97490  T
Q  383 gagtgaatcgaacct 397  Q
    ||| |||||||||||    
T  97491 gagggaatcgaacct 97505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1175 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 363
Target Start/End: Original strand, 2435 - 2531
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttag 363  Q
    |||||||| ||||||  ||||||| ||| |||||||||| || | |||||||||| || ||||||||||||||| |||||||| |||||||||||||    
T  2435 tatccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttag 2531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 413
Target Start/End: Complemental strand, 15186 - 15033
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagctttgtatgga 358  Q
    ||||||| ||||||||||||| || ||||||| ||| | |||||||| |  | ||||||||| | || ||| |||||||||| |||||||| || |||||    
T  15186 aaacttgttatccgatccaagaattgactaatccgaggagaccaatc-ccccgcccacttgcggggggcccatttaaagccagagcaagctctggatgga 15088  T
Q  359 cttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    ||||  |||||| |||| ||||||||| |||| |||||| | ||||||| |||||    
T  15087 cttaacccaccgaaattagcaccagagggaattgaacctgagacctctggaggag 15033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 396
Target Start/End: Original strand, 13056 - 13182
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagccaaagcaagctttgtatggacttagtcc 366  Q
    ||||||||||||| ||| ||||||  || |||| ||||| || |  ||||||||| || ||||||||||||    |||||||| ||||||||||||  ||    
T  13056 tatccgatccaagaatcaactaatctgaggggatcaatcccaccgtccacttgcgggggccccgtttaaagt---agcaagctctgtatggacttaaccc 13152  T
Q  367 accggaattggcaccagagtgaatcgaacc 396  Q
    |||| |||||||||||||| ||||||||||    
T  13153 accgaaattggcaccagagggaatcgaacc 13182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 20350 - 20264
Alignment:
Q  327 cccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctgaaggag 413  Q
    |||||||||||||| |||||||| ||||||||||||| |||  | |||||||||||||| ||||| ||||| | |||| ||||||||    
T  20350 cccgtttaaagccagagcaagctatgtatggacttagcccattgaaattggcaccagagggaatcaaacctgagacctttgaaggag 20264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 348
Target Start/End: Complemental strand, 66942 - 66861
Alignment:
Q  268 tatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgc-gaggccccgtttaaagccaaagcaagc 348  Q
    ||||||||||||||| |||||||| ||| |||||||||| || | ||||||||| | ||||||||||||||||| |||||||    
T  66942 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagc 66861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 407
Target Start/End: Original strand, 24 - 107
Alignment:
Q  324 ggccccgtttaaagccaaagcaagctttgtatggacttagtccaccggaattggcaccagagtgaatcgaacctaaaacctctg 407  Q
    ||||||||||||||| | ||||| || ||||||||||||| ||| || ||||| ||  |||| ||||||||||| | |||||||    
T  24 ggccccgtttaaagctagagcaaactctgtatggacttagcccatcgaaattgacataagagggaatcgaacctgagacctctg 107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 11421 - 11502
Alignment:
Q  260 aaacttgatatccgatccaaggatcgactaattcgatgggaccaatctcatcacccacttgcgagg-ccccgtttaaagcca 340  Q
    ||||||| ||||||||||||||| | ||||||| || |||| ||||| ||||  ||||||||| || |||| ||||||||||    
T  11421 aaacttggtatccgatccaaggaccaactaatttgaggggatcaatcccatcttccacttgcggggaccccatttaaagcca 11502  T

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