View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1605_high_26 (Length: 264)
Name: NF1605_high_26
Description: NF1605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1605_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 10 - 252
Target Start/End: Original strand, 41552488 - 41552730
Alignment:
| Q |
10 |
cgaagaatatgcagctctcatcatggaagagttagaccctgaaagacttggctacatcgaggtattagcttagatatatgtagnnnnnnnatattttaat |
109 |
Q |
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| T |
41552488 |
cgaagaatatgcagctctcatcatggaagagttagaccctgaaagacttggctacatcgaggtattagcttagatatatgtagtttttttttttttaaat |
41552587 |
T |
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| Q |
110 |
attagcctttaaaaccaacaggtttgggtttagttgaatgatctacactcccataacgcaataaaccaatatttgaatactaattgggggaggtaaccac |
209 |
Q |
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| T |
41552588 |
attagcctttaaaaccaacaggtttgggtttagttgaatgatctacactcccataacgtaataaaccaatatttgaatactaattgggggaggtaaccac |
41552687 |
T |
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| Q |
210 |
attagttaaaaagtgcacgttgattattgaacatattaatatt |
252 |
Q |
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| T |
41552688 |
attagttaaaaagtgcacgttgattattgaacatattaatatt |
41552730 |
T |
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