View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16063_low_13 (Length: 236)
Name: NF16063_low_13
Description: NF16063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16063_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 66 - 232
Target Start/End: Original strand, 10376528 - 10376694
Alignment:
| Q |
66 |
tgataaataattcaagtgtcaaattggccacacaaaaatcaatgtcatatctagttgtaattgactctttataaagtgatttttaaactaaaataatttt |
165 |
Q |
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| T |
10376528 |
tgataagtaattcaagtgccaaattggccacacaaaaatcaatgtcatatctagttgtaattgactctttataaagtgatttttaaactaaaataatttt |
10376627 |
T |
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| Q |
166 |
tctactttatatccaagaaagagtttcaatgtcaaccaccatcttttcaacctttgcttctcctcta |
232 |
Q |
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| T |
10376628 |
tctactttatatccaagaaagagtttcaatgtcaaccaccaccttttcaacatttgctactcctcta |
10376694 |
T |
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