View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16063_low_7 (Length: 306)
Name: NF16063_low_7
Description: NF16063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16063_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 6 - 280
Target Start/End: Complemental strand, 44279730 - 44279456
Alignment:
| Q |
6 |
caaaggaatgaagaacttgctctaacatcattcttttatgttgatcaagagggctctctggattatcagagtgaacaatgtttagaaaatatatcttctt |
105 |
Q |
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| T |
44279730 |
caaaggaatgaagaacttgctctaacatcattcttttatgttgatcaagagggctctctggattatcagagtgaacaatatttagaaaatatatcttctt |
44279631 |
T |
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| Q |
106 |
tgaggcaacaaatgctgcagaaaagatcctcttcagccctcccctagtactatcaatcttgtattcaaattcataaacttgcaaacctcccttccccgat |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44279630 |
tgaggcaacaaatgctgcagaaaagatcctcttcagccctcccctagtactatcaatcttgtattcaaattcataaacttgcaaacctcccttccccgat |
44279531 |
T |
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| Q |
206 |
ctttctgcaactgtgaccacctcggcttccttcgtactttcctgaacatggaggcaataactaacagaagttaaa |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
44279530 |
ctttctgcaactgtgaccacctcggcttccttcgtactttcctgaacatggaggcaataactgacagaagttaaa |
44279456 |
T |
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