View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16064_high_2 (Length: 602)

Name: NF16064_high_2
Description: NF16064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16064_high_2
NF16064_high_2
[»] chr5 (26 HSPs)
chr5 (14-602)||(14705753-14706341)
chr5 (102-150)||(36796628-36796676)
chr5 (114-150)||(499652-499688)
chr5 (102-153)||(10771806-10771857)
chr5 (106-153)||(11615572-11615619)
chr5 (102-153)||(19177546-19177597)
chr5 (104-150)||(17369306-17369352)
chr5 (106-152)||(27153259-27153305)
chr5 (102-150)||(13508541-13508589)
chr5 (102-154)||(31723906-31723958)
chr5 (104-150)||(20982133-20982179)
chr5 (104-150)||(34198524-34198570)
chr5 (108-150)||(42034167-42034209)
chr5 (109-150)||(14331474-14331515)
chr5 (104-226)||(14714683-14714810)
chr5 (102-159)||(40335785-40335842)
chr5 (113-150)||(41419431-41419468)
chr5 (113-150)||(41534550-41534587)
chr5 (102-146)||(4855796-4855840)
chr5 (118-150)||(14932413-14932445)
chr5 (110-150)||(28578954-28578994)
chr5 (102-150)||(32194013-32194061)
chr5 (102-154)||(33961784-33961836)
chr5 (104-156)||(35135567-35135619)
chr5 (104-160)||(37968980-37969035)
chr5 (114-150)||(39594920-39594956)
[»] chr1 (33 HSPs)
chr1 (102-151)||(29793618-29793667)
chr1 (104-153)||(5157175-5157224)
chr1 (102-150)||(4757439-4757487)
chr1 (102-150)||(6292593-6292641)
chr1 (102-157)||(33723296-33723351)
chr1 (104-149)||(10199330-10199375)
chr1 (101-146)||(15515656-15515701)
chr1 (102-154)||(9602571-9602623)
chr1 (120-152)||(18403126-18403158)
chr1 (102-150)||(24460322-24460370)
chr1 (102-150)||(48748516-48748564)
chr1 (106-149)||(2522701-2522744)
chr1 (102-145)||(25944542-25944585)
chr1 (103-146)||(32958739-32958782)
chr1 (104-155)||(51929378-51929429)
chr1 (102-156)||(3597196-3597250)
chr1 (102-140)||(43420359-43420397)
chr1 (105-149)||(6279503-6279547)
chr1 (102-150)||(6659781-6659829)
chr1 (102-150)||(7217995-7218043)
chr1 (102-150)||(15558312-15558360)
chr1 (102-150)||(15784897-15784945)
chr1 (108-152)||(18327065-18327109)
chr1 (102-146)||(28837278-28837322)
chr1 (111-151)||(30257794-30257834)
chr1 (110-150)||(30259407-30259447)
chr1 (102-150)||(33976279-33976327)
chr1 (102-150)||(34536259-34536307)
chr1 (102-146)||(35017683-35017727)
chr1 (114-150)||(41505787-41505823)
chr1 (102-150)||(44115826-44115874)
chr1 (114-158)||(48282235-48282279)
chr1 (102-150)||(52013988-52014036)
[»] chr7 (23 HSPs)
chr7 (105-153)||(32730166-32730214)
chr7 (103-149)||(529464-529510)
chr7 (108-150)||(47046029-47046071)
chr7 (113-150)||(30812250-30812287)
chr7 (104-156)||(3836598-3836650)
chr7 (102-154)||(8427114-8427166)
chr7 (102-150)||(47041960-47042008)
chr7 (103-150)||(1418521-1418568)
chr7 (114-153)||(9210934-9210973)
chr7 (105-150)||(5276594-5276639)
chr7 (105-150)||(7513663-7513708)
chr7 (114-155)||(19302479-19302520)
chr7 (111-148)||(46946017-46946054)
chr7 (114-150)||(11619079-11619115)
chr7 (102-154)||(12234806-12234858)
chr7 (102-150)||(23214956-23215004)
chr7 (102-150)||(29363609-29363657)
chr7 (108-160)||(31341242-31341294)
chr7 (114-150)||(33266407-33266443)
chr7 (114-150)||(33673190-33673226)
chr7 (107-151)||(33871347-33871391)
chr7 (102-150)||(40598406-40598454)
chr7 (102-154)||(44289960-44290012)
[»] chr4 (26 HSPs)
chr4 (102-149)||(1017129-1017176)
chr4 (87-150)||(24193618-24193681)
chr4 (102-153)||(32420976-32421027)
chr4 (102-152)||(18628472-18628522)
chr4 (102-146)||(18512440-18512484)
chr4 (114-150)||(27043751-27043787)
chr4 (102-166)||(56186803-56186867)
chr4 (102-157)||(22845620-22845674)
chr4 (104-150)||(1075561-1075607)
chr4 (102-152)||(19305027-19305077)
chr4 (104-150)||(28259376-28259422)
chr4 (102-150)||(7367975-7368023)
chr4 (114-153)||(8420908-8420948)
chr4 (109-149)||(10365883-10365923)
chr4 (114-150)||(15173224-15173260)
chr4 (114-150)||(17822786-17822822)
chr4 (106-150)||(17975258-17975302)
chr4 (102-150)||(19429391-19429439)
chr4 (102-150)||(28615435-28615483)
chr4 (102-150)||(32071964-32072012)
chr4 (114-150)||(42403944-42403980)
chr4 (102-150)||(44320050-44320098)
chr4 (102-154)||(47146045-47146097)
chr4 (114-150)||(49940088-49940124)
chr4 (102-146)||(54277248-54277292)
chr4 (102-150)||(55870263-55870311)
[»] chr3 (17 HSPs)
chr3 (102-154)||(22667504-22667556)
chr3 (102-154)||(22724143-22724195)
chr3 (102-150)||(20210849-20210897)
chr3 (102-150)||(21872216-21872264)
chr3 (115-150)||(26990146-26990181)
chr3 (106-153)||(41848634-41848681)
chr3 (103-150)||(51929843-51929890)
chr3 (114-156)||(16072956-16072998)
chr3 (104-150)||(31512486-31512532)
chr3 (114-151)||(26911704-26911741)
chr3 (102-147)||(33965412-33965457)
chr3 (102-150)||(20173811-20173859)
chr3 (104-152)||(24158435-24158483)
chr3 (114-150)||(25447166-25447202)
chr3 (102-150)||(32663739-32663787)
chr3 (102-150)||(37138383-37138431)
chr3 (102-150)||(44014719-44014767)
[»] chr2 (26 HSPs)
chr2 (102-150)||(13866979-13867027)
chr2 (102-150)||(22878199-22878247)
chr2 (106-155)||(43985314-43985363)
chr2 (106-146)||(3458700-3458740)
chr2 (102-150)||(15370244-15370292)
chr2 (102-154)||(28803447-28803499)
chr2 (102-150)||(40759261-40759309)
chr2 (110-150)||(40837358-40837398)
chr2 (102-150)||(41170711-41170759)
chr2 (103-150)||(18525162-18525209)
chr2 (103-150)||(28810373-28810420)
chr2 (102-153)||(40158819-40158870)
chr2 (105-139)||(29430862-29430896)
chr2 (105-150)||(1830143-1830188)
chr2 (105-150)||(8017538-8017583)
chr2 (102-151)||(21616580-21616629)
chr2 (101-150)||(26372648-26372697)
chr2 (113-146)||(41516949-41516982)
chr2 (106-150)||(3078529-3078573)
chr2 (114-150)||(18179062-18179098)
chr2 (114-150)||(27317492-27317528)
chr2 (114-150)||(30331864-30331900)
chr2 (102-150)||(35329739-35329787)
chr2 (114-150)||(40059382-40059418)
chr2 (114-150)||(40085282-40085318)
chr2 (102-150)||(40851699-40851747)
[»] chr8 (29 HSPs)
chr8 (103-150)||(4560604-4560651)
chr8 (101-148)||(10560147-10560194)
chr8 (106-171)||(34290974-34291039)
chr8 (106-154)||(1821934-1821982)
chr8 (106-154)||(1856379-1856427)
chr8 (102-150)||(7714343-7714391)
chr8 (102-150)||(9700102-9700150)
chr8 (102-150)||(18331815-18331863)
chr8 (104-152)||(22705031-22705079)
chr8 (114-150)||(38602440-38602476)
chr8 (104-150)||(2606152-2606198)
chr8 (108-150)||(8060775-8060817)
chr8 (102-156)||(43368615-43368669)
chr8 (102-151)||(1561378-1561427)
chr8 (102-147)||(6950423-6950468)
chr8 (102-146)||(1892149-1892193)
chr8 (102-150)||(2487929-2487977)
chr8 (102-150)||(7008699-7008747)
chr8 (102-150)||(10488564-10488612)
chr8 (102-150)||(14926903-14926951)
chr8 (102-150)||(16162861-16162909)
chr8 (102-154)||(20186381-20186433)
chr8 (102-154)||(20205448-20205500)
chr8 (108-156)||(29168776-29168824)
chr8 (114-150)||(30251375-30251411)
chr8 (106-150)||(32976478-32976522)
chr8 (102-146)||(39881646-39881690)
chr8 (102-154)||(43393689-43393741)
chr8 (114-154)||(43717851-43717891)
[»] chr6 (16 HSPs)
chr6 (104-150)||(13908343-13908389)
chr6 (104-150)||(31776193-31776239)
chr6 (102-150)||(8420117-8420166)
chr6 (102-154)||(12111068-12111120)
chr6 (102-145)||(6742912-6742955)
chr6 (102-145)||(7351597-7351640)
chr6 (102-156)||(2732160-2732216)
chr6 (104-149)||(17241082-17241127)
chr6 (102-151)||(26559159-26559208)
chr6 (102-150)||(738462-738510)
chr6 (104-140)||(3750100-3750136)
chr6 (102-150)||(4325226-4325274)
chr6 (102-150)||(8010458-8010506)
chr6 (102-150)||(10016724-10016772)
chr6 (114-150)||(20861619-20861655)
chr6 (114-150)||(21405075-21405111)
[»] scaffold0020 (1 HSPs)
scaffold0020 (104-150)||(159894-159940)


Alignment Details
Target: chr5 (Bit Score: 553; Significance: 0; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 14 - 602
Target Start/End: Complemental strand, 14706341 - 14705753
Alignment:
Q  14 attatactgttttcgtaagttatccctatgagtttatggagataattaagttgaaaagagcttatacaactctccaaatagtttcacttctcacaagtgt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  14706341 attatactgttttcgtaagttatccctatgagtttatggagataattaagttgaaaagagcttatacaactcttcaaatagtttcacatctcacaagtgt 14706242  T
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttcacaatttgttttgggtgccattattttgtagtaattggtctccggaat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706241 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttcacaatttgttttgggtgccattattttgtagtaattggtctccggaat 14706142  T
Q  214 gctttggctatgaccataattttgtatccaatttcttcttgtagtagcatgattatatttgtttgaatgttgatgttttccttaaaattgcacttttgtg 313  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14706141 gctttggctatgaccataattttgtattcaatttcgtcttgtagtagcatgattatatttgtttcaatgttgatgttttccttaaaattgcacttttgtg 14706042  T
Q  314 tagtatatgactatatgttgtggatgagcacggtaacttgaagcagttttaagattaaacaatgatcataatttatgaatttgtttgcttttagcttaac 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14706041 tagtatatgactatatgttgtggatgagcacggtaacttgaagcagttttaagattaaacaatgatcataatttatgaatttgtttgcttttggcttaac 14705942  T
Q  414 tttttaagaagtgattatatataataatgatatagtcgtgtatatactagatttctcaacagcatttcagtgtttatctcatggcaaattttagtttaaa 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14705941 tttttaagaagtgattatatataataatgatatagtcgtgtatatactagatttctcaacagcatttcagtgtttatctcatggcaaattttagtttaaa 14705842  T
Q  514 gtttatgacactgtagtacaacgtaatgaggtggatggattgcagagatgcactggattctttagtgctggttcgatattgctgcaggc 602  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14705841 gtttataacactgtagtacaaagtaatgaggtggatggattgcagagatgcactggattctttagggctggttcgatattgctgcaggc 14705753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 36796676 - 36796628
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  36796676 tctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaa 36796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 499688 - 499652
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||||||||||||||||||||||    
T  499688 ttatgtcagtaggtaagctcaaataagtcaatccaaa 499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 10771857 - 10771806
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    ||||||||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  10771857 tctcacaagtgcttatgccagtagataagctcaaataagccaatccaaatag 10771806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 11615619 - 11615572
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  11615619 acaagtgtttatgttagtagataagctcaaataagccaatccaaatag 11615572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 19177546 - 19177597
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    ||||||||||||| ||| || ||||||| |||||||||||||||||||||||    
T  19177546 tctcacaagtgttcatgccaataggtaaactcaaataagtcaatccaaatag 19177597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 17369306 - 17369352
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||||    
T  17369306 tcacaagtgattatgtcagtagataagttcaaataagtcaatccaaa 17369352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 27153305 - 27153259
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 152  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||    
T  27153305 acaagtgtttttgccagtaggtaagctcaaagaagtcaatccaaata 27153259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 13508541 - 13508589
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| |||||    
T  13508541 tctcacaagtgtttatgccagtagataagttcaaataagtcaagccaaa 13508589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 31723906 - 31723958
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||| |||||||||||  ||||  ||||||||||||||||||||||||||||    
T  31723906 tctcataagtgtttatgctagtacataagctcaaataagtcaatccaaatagg 31723958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 20982179 - 20982133
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||| | |||||| |||||||||||||| |||||||||    
T  20982179 tcacaagtgtttacgacagtagataagctcaaataagccaatccaaa 20982133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 34198524 - 34198570
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  34198524 tcacaagtgtttatgttagtaaataaactcaaataagtcaatccaaa 34198570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 42034167 - 42034209
Alignment:
Q  108 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||| |||||||||||||||||||||||||||  ||||||||    
T  42034167 aagtgcttatgtcagtaggtaagctcaaataagctaatccaaa 42034209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 14331474 - 14331515
Alignment:
Q  109 agtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||| ||||| |||||| ||||||||||||||||||||||||    
T  14331474 agtgcttatgacagtagataagctcaaataagtcaatccaaa 14331515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 14714810 - 14714683
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata-ggtctttagtttcacaa---tttgttttgggtgccattattttgtagt-a 198  Q
    ||||||||| |||||||||| | ||||||||||| || |||| |||| | |  ||||||||||||||   ||| |||| |||||||||||||| || | |    
T  14714810 tcacaagtgcttatgtcagtggataagctcaaatgagccaattcaaacatgccctttagtttcacaactttttttttttggtgccattattttttactaa 14714711  T
Q  199 attggtctccggaatgctttggctatga 226  Q
    ||| || ||||| || ||||||||||||    
T  14714710 atttgtttccggcatactttggctatga 14714683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 40335842 - 40335785
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttt 159  Q
    |||||||||||||| ||  ||||| ||| |||||||||||||||||||| ||| ||||    
T  40335842 tctcacaagtgtttgtgcgagtagataaactcaaataagtcaatccaaacaggccttt 40335785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 41419431 - 41419468
Alignment:
Q  113 tttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  41419431 tttatgtcagtagattagctcaaataagtcaatccaaa 41419468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 41534550 - 41534587
Alignment:
Q  113 tttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  41534550 tttatgtcagtagattagctcaaataagtcaatccaaa 41534587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 4855796 - 4855840
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    ||||||||||||||| |||| ||  ||||||||||||||||||||    
T  4855796 tctcacaagtgtttaagtcattatataagctcaaataagtcaatc 4855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 14932413 - 14932445
Alignment:
Q  118 gtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| ||||||||||||||||||||||||    
T  14932413 gtcagtagataagctcaaataagtcaatccaaa 14932445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 28578954 - 28578994
Alignment:
Q  110 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  28578954 gtgtttttgtcagtagataagctcaaataagtcaattcaaa 28578994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 32194061 - 32194013
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||  |||| ||| ||| ||||||||||||||||||||||||    
T  32194061 tctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 32194013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 33961784 - 33961836
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||| ||||| ||||||| |||| ||||||||||||| ||||| ||||||||    
T  33961784 tctcataagtgcttatgtccgtagataagctcaaataattcaattcaaatagg 33961836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 35135619 - 35135567
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 156  Q
    ||||||||| ||||||||||||  ||||| |||||||| |||||||| |||||    
T  35135619 tcacaagtggttatgtcagtagagaagctgaaataagttaatccaaacaggtc 35135567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 37968980 - 37969035
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttta 160  Q
    ||||||||  |||||||||||| |||||||||| ||||| ||||| |||||||||||    
T  37968980 tcacaagtacttatgtcagtagataagctcaaacaagtc-atccagataggtcttta 37969035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 39594920 - 39594956
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  39594920 ttatgtcggtagataagctcaaataagtcaatccaaa 39594956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 29793667 - 29793618
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  29793667 tctcacaagtgtttatgtcagtagataagctcaaataagtcaatacaaat 29793618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 5157175 - 5157224
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  5157175 tcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaatag 5157224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 4757439 - 4757487
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  4757439 tctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaa 4757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 6292593 - 6292641
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  6292593 tctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaa 6292641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 33723351 - 33723296
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtct 157  Q
    |||||||||||||||||  ||||| |||| ||||||||||||||||||| ||||||    
T  33723351 tctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaacaggtct 33723296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 10199375 - 10199330
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 149  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||    
T  10199375 tcacaagtgcttatgttagtagataagctcaaataagtcaatccaa 10199330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 15515656 - 15515701
Alignment:
Q  101 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||    
T  15515656 ttctcacacgtgtttatgccagtagataagctcaaataagtcaatc 15515701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 9602623 - 9602571
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||||||| ||| || ||||| |||||||| |||||||||||||||||||    
T  9602623 tctcacaagtgcttaagttagtagataagctcagataagtcaatccaaatagg 9602571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 18403158 - 18403126
Alignment:
Q  120 cagtaggtaagctcaaataagtcaatccaaata 152  Q
    |||||||||||||||||||||||||||||||||    
T  18403158 cagtaggtaagctcaaataagtcaatccaaata 18403126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 24460370 - 24460322
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| | |||||||||| |||| |||||||||||||||||||    
T  24460370 tctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaa 24460322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 48748564 - 48748516
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||||| | | ||||||||||||||||||| ||||    
T  48748564 tctcacaagtgtttatgtcaatggataagctcaaataagtcaattcaaa 48748516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 2522701 - 2522744
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 149  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||    
T  2522701 acaagtgtttatgccagtagataaactcaaataagtcaatccaa 2522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 25944542 - 25944585
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 145  Q
    |||||||||||||||||||||||  ||||| |||||||||||||    
T  25944542 tctcacaagtgtttatgtcagtaaataagcgcaaataagtcaat 25944585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 32958739 - 32958782
Alignment:
Q  103 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||    
T  32958739 ctcacaagtgcttatgacagtagataagctcaaataagtcaatc 32958782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 51929429 - 51929378
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggt 155  Q
    ||||| ||| |||||||||||| |||||||||| ||||||||||||| ||||    
T  51929429 tcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaagaggt 51929378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 3597250 - 3597196
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 156  Q
    ||||||||||| |||| ||| ||| ||| |||||||||||||||||||| |||||    
T  3597250 tctcacaagtggttatatcattagataacctcaaataagtcaatccaaacaggtc 3597196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 43420359 - 43420397
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataag 140  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  43420359 tctcacaagtgtttatgtctgtagataagctcaaataag 43420397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 6279503 - 6279547
Alignment:
Q  105 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 149  Q
    |||||||| |||||||||||| |||||| |||||||||| |||||    
T  6279503 cacaagtgcttatgtcagtagttaagctgaaataagtcactccaa 6279547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 6659781 - 6659829
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||  ||||| |||||| |||||||||||||||||    
T  6659781 tctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaa 6659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 7218043 - 7217995
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||| ||||||||||| | |||| |||||| |||||||||||||||||    
T  7218043 tctcagaagtgtttatgccggtagataagcttaaataagtcaatccaaa 7217995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 15558312 - 15558360
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||| | |||| | ||||||||||||| ||||||||||    
T  15558312 tctcacaagtgtttaagccagtcgataagctcaaataactcaatccaaa 15558360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 15784897 - 15784945
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||| ||||| |||||| |||||  ||||||||||||||||||||||||    
T  15784897 tctcgcaagtttttatgacagtaaataagctcaaataagtcaatccaaa 15784945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 18327109 - 18327065
Alignment:
Q  108 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 152  Q
    ||||| ||||| |||||| |||||||||||||| |||||||||||    
T  18327109 aagtgcttatgacagtagataagctcaaataagccaatccaaata 18327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 28837322 - 28837278
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    |||| |||||| |||||||||||| |||||||||||||| |||||    
T  28837322 tctctcaagtgcttatgtcagtagataagctcaaataagccaatc 28837278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 30257794 - 30257834
Alignment:
Q  111 tgtttatgtcagtaggtaagctcaaataagtcaatccaaat 151  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  30257794 tgtttatgtcagtagataaactcaaataagtaaatccaaat 30257834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 30259447 - 30259407
Alignment:
Q  110 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||| | |||||||| ||||||||||||||||||||    
T  30259447 gtgtttatgccggtaggtaaactcaaataagtcaatccaaa 30259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 33976279 - 33976327
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| | |||||| ||  ||||||||||||||||||||||||    
T  33976279 tctcacaagtgctgatgtcattaaataagctcaaataagtcaatccaaa 33976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 34536259 - 34536307
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||||| ||| || | |||||||||||| ||||||    
T  34536259 tctcacaagtgtttatgtcaatagatacgttcaaataagtcattccaaa 34536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 35017683 - 35017727
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    ||||||||||||||||| || ||| |||||||||||||| |||||    
T  35017683 tctcacaagtgtttatgccaatagataagctcaaataagccaatc 35017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 41505787 - 41505823
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| |||||||||||||| |||||||||    
T  41505787 ttatgtcagtagataagctcaaataagccaatccaaa 41505823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 44115874 - 44115826
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||  ||| || ||||||||| ||||||||||||||||||||    
T  44115874 tctcacaagtacttaagtgagtaggtaaactcaaataagtcaatccaaa 44115826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 48282235 - 48282279
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtctt 158  Q
    ||||| |||||||||||||||||| |||||| ||||| |||||||    
T  48282235 ttatgccagtaggtaagctcaaattagtcaacccaaacaggtctt 48282279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 52013988 - 52014036
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||| ||||||||| || ||| ||||||||||||||| ||||||||    
T  52013988 tctcacacgtgtttatgccaatagataagctcaaataagttaatccaaa 52014036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 32730214 - 32730166
Alignment:
Q  105 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  32730214 cacaaatgtttatgtcagtaggtaagctcaaataagtcaatcgaaatag 32730166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 529464 - 529510
Alignment:
Q  103 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 149  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||    
T  529464 ctcacaagtgtttatgccagtagataagctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 47046071 - 47046029
Alignment:
Q  108 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47046071 aagtgtttatgtcagtagataagcacaaataagtcaatccaaa 47046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 30812250 - 30812287
Alignment:
Q  113 tttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  30812250 tttatgtcagtaggtaaactcaaataagtcaatccaaa 30812287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 3836650 - 3836598
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 156  Q
    ||||||||| ||| | |||||| |||||||||||||| |||||||||||||||    
T  3836650 tcacaagtgcttaagccagtagataagctcaaataaggcaatccaaataggtc 3836598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 8427114 - 8427166
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||||||  |||||| ||||| ||||||||||||| ||||||||||||||    
T  8427114 tctcacaagtacttatgttagtagataagctcaaataaatcaatccaaatagg 8427166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 47042008 - 47041960
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||| |||||| ||| || |||||||||||||||||||||    
T  47042008 tctcacaagtgttaatgtcaatagatatgctcaaataagtcaatccaaa 47041960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 1418521 - 1418568
Alignment:
Q  103 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||| ||||| ||||| |||||| ||||||||||||||||||||||||    
T  1418521 ctcataagtgcttatgccagtagataagctcaaataagtcaatccaaa 1418568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 153
Target Start/End: Original strand, 9210934 - 9210973
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  9210934 ttatatcagtagataagctcaaataagtcaatccaaatag 9210973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 5276594 - 5276639
Alignment:
Q  105 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  5276594 cacaagtgtttatgttagtagataagctcatctaagtcaatccaaa 5276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 7513663 - 7513708
Alignment:
Q  105 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| ||||| |||||| ||||||||||||||||||| ||||    
T  7513663 cacaagtgcttatgccagtagataagctcaaataagtcaattcaaa 7513708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 19302520 - 19302479
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaataggt 155  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  19302520 ttatgtcagtagataagctcaaataagtcaattcaaacaggt 19302479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 46946017 - 46946054
Alignment:
Q  111 tgtttatgtcagtaggtaagctcaaataagtcaatcca 148  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  46946017 tgtttatgccagtagctaagctcaaataagtcaatcca 46946054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 11619115 - 11619079
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| |||||||||||||| |||||||||    
T  11619115 ttatgtcagtagataagctcaaataagccaatccaaa 11619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 12234858 - 12234806
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||| ||| | ||| |||||| ||||||||| ||||||||||||||||||    
T  12234858 tctcacacgtgctaatgccagtagataagctcaactaagtcaatccaaatagg 12234806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 23214956 - 23215004
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||| |||||||||||  ||||| |||| |||||||||||||||||||    
T  23214956 tctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaa 23215004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 29363609 - 29363657
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||| ||||| |||| ||||||||| |||||||||    
T  29363609 tctcacaagtgcttatgttagtagataagttcaaataagccaatccaaa 29363657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 31341242 - 31341294
Alignment:
Q  108 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttta 160  Q
    |||||||||||  |||||  ||||||||||||||||||||||| | |||||||    
T  31341242 aagtgtttatgcaagtagaaaagctcaaataagtcaatccaaacatgtcttta 31341294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 33266443 - 33266407
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  33266443 ttatgtcggtagataagctcaaataagtcaatccaaa 33266407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 33673190 - 33673226
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  33673190 ttatgtcagtagataagctcaaatgagtcaatccaaa 33673226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 33871347 - 33871391
Alignment:
Q  107 caagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 151  Q
    ||||||||||||| ||||| |||||||||| ||||||||| ||||    
T  33871347 caagtgtttatgtaagtagataagctcaaaaaagtcaatcaaaat 33871391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 40598454 - 40598406
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||| |||||||| |||  ||||| ||||||||||||||||||||||||    
T  40598454 tctcgcaagtgttcatgctagtagataagctcaaataagtcaatccaaa 40598406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 44290012 - 44289960
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  44290012 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 44289960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 1017129 - 1017176
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 149  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  1017129 tctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 24193618 - 24193681
Alignment:
Q  87 ccaaatagtttcacttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||| ||||  |||||||||||||||| ||| || ||||||||||||||||||||||||    
T  24193618 ccaaatagtctcacaactcacaagtgtttatgccaggagataagctcaaataagtcaatccaaa 24193681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 32421027 - 32420976
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  32421027 tctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaatag 32420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 18628522 - 18628472
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 152  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  18628522 tctcacaagtgtttatgtcagtagataagctcaaatacgtcaatctaaata 18628472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 18512484 - 18512440
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  18512484 tctcacaagtgtttatgtcagtagataagctcaaataagttaatc 18512440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 27043787 - 27043751
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27043787 ttatgtcagtagataagctcaaataagtcaatccaaa 27043751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 56186867 - 56186803
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttca 166  Q
    |||||||||||||||||| ||||| ||| ||| ||||||| |||||||| | || ||||||||||    
T  56186867 tctcacaagtgtttatgttagtagataaactcgaataagttaatccaaacaagtgtttagtttca 56186803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 22845674 - 22845620
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtct 157  Q
    ||||||||||  |||||| ||||| |||||||||||||| ||||||||||||||||    
T  22845674 tctcacaagtacttatgt-agtagataagctcaaataagccaatccaaataggtct 22845620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 1075561 - 1075607
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||| |||||| |||||||||||||| |||| ||||    
T  1075561 tcacaagtgtttatgccagtagataagctcaaataagccaattcaaa 1075607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 19305027 - 19305077
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 152  Q
    |||||||| || |||||||| ||| ||| ||||||||||||||||||||||    
T  19305027 tctcacaaatgcttatgtcaatagataatctcaaataagtcaatccaaata 19305077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 28259376 - 28259422
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||| |||||||||| | ||||||||||||||||| ||||||    
T  28259376 tcacaagtgcttatgtcagttgataagctcaaataagtcagtccaaa 28259422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 7368023 - 7367975
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||| ||||||| | |||| ||| ||||||||||||||||||||    
T  7368023 tctcacaagcgtttatgcctgtagataaactcaaataagtcaatccaaa 7367975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 153
Target Start/End: Original strand, 8420908 - 8420948
Alignment:
Q  114 ttatgtcagtaggtaagctcaaa-taagtcaatccaaatag 153  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  8420908 ttatgtcagtagataagctcaaactaagtcaatccaaatag 8420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 10365883 - 10365923
Alignment:
Q  109 agtgtttatgtcagtaggtaagctcaaataagtcaatccaa 149  Q
    ||||||||||||||||| |||| | ||||||||||||||||    
T  10365883 agtgtttatgtcagtagataagattaaataagtcaatccaa 10365923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 15173260 - 15173224
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| |||| |||||||||||||||||||    
T  15173260 ttatgtcagtagataagttcaaataagtcaatccaaa 15173224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 17822822 - 17822786
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  17822822 ttatgtcagtagataagctcaaataagttaatccaaa 17822786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 17975302 - 17975258
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||    
T  17975302 acaagtgtttgtgttggtagataagctcaaataagtcaatccaaa 17975258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 19429439 - 19429391
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||||  |||||  |||||||||||||| |||||||||    
T  19429439 tctcacaagtgtttataccagtaaataagctcaaataagccaatccaaa 19429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 28615435 - 28615483
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||  ||||| ||| || |||||||||||||||||    
T  28615435 tctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaa 28615483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 32071964 - 32072012
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||||| ||| ||| ||||||||||||| ||||||    
T  32071964 tctcacaagtgcttatgtcaatagataaactcaaataagtcagtccaaa 32072012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 42403980 - 42403944
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||| | ||||||||||||||||||||||||    
T  42403980 ttatgtcagttgataagctcaaataagtcaatccaaa 42403944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 44320050 - 44320098
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| |||||||| || |||||||||||||||||  |||||||||    
T  44320050 tctcacaattgtttatgccaataggtaagctcaaataaaccaatccaaa 44320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 47146045 - 47146097
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||||||| ||||| || ||  |||| |||||||||||||||||||||||    
T  47146045 tctcacaagtgcttatgccaatatataagttcaaataagtcaatccaaatagg 47146097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 49940124 - 49940088
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||| || |||||||||||||||||||||||||||    
T  49940124 ttatgttagcaggtaagctcaaataagtcaatccaaa 49940088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 54277292 - 54277248
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    ||||| |||||||||||||| ||| |||| |||||||||||||||    
T  54277292 tctcataagtgtttatgtcactagataagttcaaataagtcaatc 54277248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 55870311 - 55870263
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  55870311 tctcacaaatgtttatgtcattagataaactcaaataagttaatccaaa 55870263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 22667504 - 22667556
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  22667504 tctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaatagg 22667556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 22724143 - 22724195
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  22724143 tctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaatagg 22724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 20210897 - 20210849
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||||||||||    
T  20210897 tctcacaagtggttatgtcagtagataacctcaaataaatcaatccaaa 20210849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 21872264 - 21872216
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||||||||| |||| |||||||||| ||||||||    
T  21872264 tctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaa 21872216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 26990181 - 26990146
Alignment:
Q  115 tatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26990181 tatgtcagtagataagctcaaataagtcaatccaaa 26990146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 41848681 - 41848634
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    |||||||||||||| ||||| ||| |||||||||||||||| ||||||    
T  41848681 acaagtgtttatgttagtagataaactcaaataagtcaatctaaatag 41848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 51929843 - 51929890
Alignment:
Q  103 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||||  | ||| ||||||||||||||||||||||||    
T  51929843 ctcacaagtgtttatgctaatagataagctcaaataagtcaatccaaa 51929890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 16072998 - 16072956
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 156  Q
    |||||||| ||| |||||||||||||||||||||||| |||||    
T  16072998 ttatgtcattagataagctcaaataagtcaatccaaacaggtc 16072956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 31512486 - 31512532
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||  |||||||||||||||| |||||||||||||    
T  31512486 tcacaagtgttcatgctagtaggtaagctcaaacaagtcaatccaaa 31512532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 151
Target Start/End: Original strand, 26911704 - 26911741
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaat 151  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  26911704 ttatgtcagtagataaactcaaataagtcaatccaaat 26911741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 33965457 - 33965412
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcc 147  Q
    ||||||| ||||||| |||||||| |||||||||||| ||||||||    
T  33965457 tctcacatgtgtttaagtcagtagataagctcaaatatgtcaatcc 33965412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 20173859 - 20173811
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||| ||| ||| || |||||||||||||||||||||    
T  20173859 tctcacaagtgcttatttcaatagatacgctcaaataagtcaatccaaa 20173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 24158483 - 24158435
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 152  Q
    ||||||||  |||||||||||| |||||| ||||||| |||||||||||    
T  24158483 tcacaagtacttatgtcagtagataagcttaaataagccaatccaaata 24158435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 25447202 - 25447166
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  25447202 ttatgtcagtagataaactcaaataagtcaatccaaa 25447166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 32663739 - 32663787
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| | |||| |||| |||||||||||||| |||||||||    
T  32663739 tctcacaagtgtatttgtcggtagataagctcaaataagccaatccaaa 32663787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 37138383 - 37138431
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||||||||| |||  || |||||| |||||||||    
T  37138383 tctcacaagtgtttatgtcagtagataaattctaataagccaatccaaa 37138431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 44014767 - 44014719
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||  ||||| ||| |||||||||| |||||||||    
T  44014767 tctcacaagtgtttatgctagtagataaactcaaataagccaatccaaa 44014719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 13866979 - 13867027
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  13866979 tctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaa 13867027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 22878199 - 22878247
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  22878199 tctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaa 22878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 43985314 - 43985363
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggt 155  Q
    |||||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  43985314 acaagtgtttatgtcagtagataaacttaaataagtcgatccaaataggt 43985363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 3458700 - 3458740
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  3458700 acaagtgtttatgccagtaagtaagctcaaataagtcaatc 3458740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 15370292 - 15370244
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| || ||||| |||||| ||||||||||||||||||||||||    
T  15370292 tctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaa 15370244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 28803499 - 28803447
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||| ||| ||||| | |||| ||||||||||||||||||||||||||||    
T  28803499 tctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaatagg 28803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 40759261 - 40759309
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  40759261 tctcacaagtgcttatgtcaatagataagctcaaataaggcaatccaaa 40759309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 40837398 - 40837358
Alignment:
Q  110 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  40837398 gtgtttatgtcagtagataagctcaaataagccaatccaaa 40837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 41170711 - 41170759
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  41170711 tctcacaagtgtttatgttagtagataaactcaaataagccaatccaaa 41170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 18525209 - 18525162
Alignment:
Q  103 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||| |||||||||||| |||| ||||||||||||||||||| ||||    
T  18525209 ctcacgagtgtttatgtctgtagataagctcaaataagtcaattcaaa 18525162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 28810420 - 28810373
Alignment:
Q  103 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||| || |||  |||||||||||||||||||||||    
T  28810420 ctcacaagtgtttatgccaatagagaagctcaaataagtcaatccaaa 28810373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 40158819 - 40158870
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 153  Q
    ||||||||||  |||||||||||| || ||||||||||| ||||||||||||    
T  40158819 tctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaatag 40158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 29430862 - 29430896
Alignment:
Q  105 cacaagtgtttatgtcagtaggtaagctcaaataa 139  Q
    ||||||||||||||||||||| |||||||||||||    
T  29430862 cacaagtgtttatgtcagtagataagctcaaataa 29430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 1830143 - 1830188
Alignment:
Q  105 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| |||||||||||  ||| ||||||||||||||||||||    
T  1830143 cacaagtgcttatgtcagtaaataaactcaaataagtcaatccaaa 1830188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 8017538 - 8017583
Alignment:
Q  105 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| |||||||| ||| ||| ||||||||||||||||||||    
T  8017538 cacaagtgcttatgtcaatagataacctcaaataagtcaatccaaa 8017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 21616629 - 21616580
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 151  Q
    |||||||| ||||||||||||| | ||| || ||||||||||||||||||    
T  21616629 tctcacaaatgtttatgtcagtggataaactgaaataagtcaatccaaat 21616580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 26372697 - 26372648
Alignment:
Q  101 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||| || ||||||||| || ||||||||||| ||||||||||||    
T  26372697 ttctcacaaatgcttatgtcagaagataagctcaaatgagtcaatccaaa 26372648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 146
Target Start/End: Complemental strand, 41516982 - 41516949
Alignment:
Q  113 tttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    ||||||| ||||||||||||||||||||||||||    
T  41516982 tttatgtgagtaggtaagctcaaataagtcaatc 41516949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 3078573 - 3078529
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||    
T  3078573 acaagtgtttgtgttggtagataagctcaaataagtcaatccaaa 3078529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 18179062 - 18179098
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  18179062 ttatgttagtagataagctcaaataagtcaatccaaa 18179098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 27317492 - 27317528
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  27317492 ttatgtcggtagataagctcaaataagtcaatccaaa 27317528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 30331864 - 30331900
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| |||||| |||||||||||||||||    
T  30331864 ttatgtcagtagataagctgaaataagtcaatccaaa 30331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 35329787 - 35329739
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||| ||||||||||  ||||| |||||||| |||||||||||||||    
T  35329787 tctcactagtgtttatggtagtagataagctcacataagtcaatccaaa 35329739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 40059418 - 40059382
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaa 40059382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 40085318 - 40085282
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaa 40085282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 40851699 - 40851747
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| |||||||||||| |  ||||| ||||||||||||||||||    
T  40851699 tctcacaattgtttatgtcagcaattaagcgcaaataagtcaatccaaa 40851747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000006; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 4560604 - 4560651
Alignment:
Q  103 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  4560604 ctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaa 4560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 10560147 - 10560194
Alignment:
Q  101 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcca 148  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  10560147 ttctcacaaatgtttatgtcagtagataagctcaactaagtcaatcca 10560194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 34290974 - 34291039
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttcacaatt 171  Q
    |||||||||||||||||||| | | |||||| ||||||||| ||||||| || |||||||| ||||    
T  34290974 acaagtgtttatgtcagtagatgaactcaaacaagtcaatcgaaataggcctctagtttcaaaatt 34291039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 1821934 - 1821982
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||    
T  1821934 acaagtgtttatgtcggtatctaagctcaaataagtcaattcaaatagg 1821982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 1856379 - 1856427
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||    
T  1856379 acaagtgtttatgtcggtatctaagctcaaataagtcaattcaaatagg 1856427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 7714343 - 7714391
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||||| || ||  ||||||||||||||||||||||||    
T  7714343 tctcacaagtgtttatgacattatataagctcaaataagtcaatccaaa 7714391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 9700102 - 9700150
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||||||    
T  9700102 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 9700150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 18331815 - 18331863
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||| ||||| |||| |||||||||||||||||||    
T  18331815 tctcacaagtgcttatgttagtagataagatcaaataagtcaatccaaa 18331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 22705079 - 22705031
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 152  Q
    |||||||||||||||| | |||||||||||||||||| |||| ||||||    
T  22705079 tcacaagtgtttatgttaataggtaagctcaaataagccaattcaaata 22705031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 38602440 - 38602476
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38602440 ttatgtcagtagataagctcaaataagtcaatccaaa 38602476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 2606152 - 2606198
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||| |||| |||||||||||| ||||||| ||||||||||||||||    
T  2606152 tcactagtgattatgtcagtagataagctcgaataagtcaatccaaa 2606198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 8060775 - 8060817
Alignment:
Q  108 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  8060775 aagtgtttatgtcaatagatatgctcaaataagtcaatccaaa 8060817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 43368669 - 43368615
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 156  Q
    |||||||| || |||||| ||||| |||| ||||||||||||||||||| |||||    
T  43368669 tctcacaaatgcttatgttagtagataagatcaaataagtcaatccaaacaggtc 43368615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 1561378 - 1561427
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 151  Q
    ||||||||||||||||| || ||| |||| |||||||| |||||||||||    
T  1561378 tctcacaagtgtttatgccattagataagatcaaataaatcaatccaaat 1561427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 6950423 - 6950468
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcc 147  Q
    |||||||| |||||||| |||||| ||| |||||||||||||||||    
T  6950423 tctcacaaatgtttatgccagtagataaactcaaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 1892193 - 1892149
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    ||||||||||||||||| | |||| ||| ||||||||||||||||    
T  1892193 tctcacaagtgtttatgacggtagataaactcaaataagtcaatc 1892149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 2487977 - 2487929
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| |||||||||||| | | |||||||||| |||||||||    
T  2487977 tctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaa 2487929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 7008699 - 7008747
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| ||||| |||||| ||| ||||||||||||||| ||||    
T  7008699 tctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaa 7008747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 10488564 - 10488612
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||| |||||||||| ||| | |||||||||||||| |||||||||    
T  10488564 tctcacatgtgtttatgttagttgataagctcaaataagccaatccaaa 10488612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 14926951 - 14926903
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||| ||||| |||||  |||| |||||||||||||||||||    
T  14926951 tctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaa 14926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 16162861 - 16162909
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||  ||||| ||| |||||||||| |||||||||    
T  16162861 tctcacaagtgtttatgctagtagataaactcaaataagccaatccaaa 16162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 20186433 - 20186381
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  20186433 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 20186381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 20205500 - 20205448
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  20205500 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 20205448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 29168824 - 29168776
Alignment:
Q  108 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 156  Q
    ||||| |||||  ||||||||||||||||| ||||||| ||||||||||    
T  29168824 aagtgcttatgctagtaggtaagctcaaatcagtcaatacaaataggtc 29168776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 30251411 - 30251375
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||| |||||||||||||| |||||||||    
T  30251411 ttatgtcagtagataagctcaaataagccaatccaaa 30251375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 32976478 - 32976522
Alignment:
Q  106 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||| |||||||||||| ||||||||||||||  ||||||||    
T  32976478 acaagtgcttatgtcagtagataagctcaaataagggaatccaaa 32976522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 39881690 - 39881646
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 146  Q
    ||||||||||||||||| || ||| |||| |||||||||||||||    
T  39881690 tctcacaagtgtttatgccaatagataagttcaaataagtcaatc 39881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 43393741 - 43393689
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    ||||| |||||||| ||  ||||| |||||| |||||||||||||||||||||    
T  43393741 tctcaaaagtgtttttgcaagtagataagcttaaataagtcaatccaaatagg 43393689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 43717891 - 43717851
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    |||||||| ||| |||||||||||||| |||||||||||||    
T  43717891 ttatgtcaatagataagctcaaataagccaatccaaatagg 43717851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 13908343 - 13908389
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||    
T  13908343 tcacaagtgtttatgtcagtagataagttcaaataagtcaattcaaa 13908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 31776239 - 31776193
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  31776239 tcacaagtgtatatatcagtagataagctcaaataagtcaatccaaa 31776193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 8420166 - 8420117
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaat-aagtcaatccaaa 150  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  8420166 tctcacaagtgtttatgtcaatagataagctcaaataaagtcaatccaaa 8420117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 12111068 - 12111120
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 154  Q
    |||| |||||| |||||  ||||| ||||||||||||||||||||||||||||    
T  12111068 tctcgcaagtgcttatgctagtagataagctcaaataagtcaatccaaatagg 12111120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 6742912 - 6742955
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 145  Q
    ||||||||||| |||||  |||||||||||||||||||||||||    
T  6742912 tctcacaagtgattatgctagtaggtaagctcaaataagtcaat 6742955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 7351640 - 7351597
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 145  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||    
T  7351640 tctcacaagtgcttatgtcagtagataaactcaaataagtcaat 7351597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 2732216 - 2732160
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctc--aaataagtcaatccaaataggtc 156  Q
    ||||||||||| ||||||||||||  ||||||  |||||||||||||| ||||||||    
T  2732216 tctcacaagtgcttatgtcagtagacaagctctcaaataagtcaatcccaataggtc 2732160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 17241127 - 17241082
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 149  Q
    |||||||||||||||||||||  ||| ||||||||||| |||||||    
T  17241127 tcacaagtgtttatgtcagtatataaactcaaataagtaaatccaa 17241082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 26559208 - 26559159
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 151  Q
    |||||||| || ||||| |||||||||| ||||||||||| |||||||||    
T  26559208 tctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaat 26559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 738510 - 738462
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| ||||||| ||| ||| ||||||||||||||| ||||||||    
T  738510 tctcacaaatgtttatctcaatagataagctcaaataagttaatccaaa 738462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 3750100 - 3750136
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataag 140  Q
    |||||||||||||||||||||| |||||||| |||||    
T  3750100 tcacaagtgtttatgtcagtagataagctcagataag 3750136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 4325274 - 4325226
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||||||| ||||| ||| || |||| ||||||||||||    
T  4325274 tctcacaagtgtttatgttagtagataaactaaaattagtcaatccaaa 4325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 8010458 - 8010506
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||| |||||||| || ||| |||||||| |||||||||||||||    
T  8010458 tctcacaaatgtttatgccaatagataagctcacataagtcaatccaaa 8010506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 10016724 - 10016772
Alignment:
Q  102 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||||||||||||||| | |||| |||||||||||||  |||||||||    
T  10016724 tctcacaagtgtttatgcctgtagataagctcaaataaaccaatccaaa 10016772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 20861655 - 20861619
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  20861655 ttatgccagtaggtaagctcaaataagacaatccaaa 20861619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 21405111 - 21405075
Alignment:
Q  114 ttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||  ||||||||||||||||||||||||    
T  21405111 ttatgtcagtatataagctcaaataagtcaatccaaa 21405075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 159940 - 159894
Alignment:
Q  104 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 150  Q
    |||||||||||||| | ||||| |||||||||||||| |||||||||    
T  159940 tcacaagtgtttatattagtagataagctcaaataagccaatccaaa 159894  T

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