View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16064_low_2 (Length: 656)
Name: NF16064_low_2
Description: NF16064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16064_low_2 |
 | |
|
| [»] scaffold0265 (2 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 469; Significance: 0; HSPs: 38)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 56 - 548
Target Start/End: Complemental strand, 34916389 - 34915897
Alignment:
| Q |
56 |
aaagggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacg |
155 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
34916389 |
aaagggattatgaattggggtaatggtgctattttcgatggttattggtcaaatggactttcacatggatatggagtttatagatctgctaatggaaacg |
34916290 |
T |
|
| Q |
156 |
tctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaa |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
34916289 |
tctacactggaaattgggaaaaaggggaaagggatggaaaagggattatgaaatgggctaacggtgatgttttcgatggttattggtcaaatggacagaa |
34916190 |
T |
|
| Q |
256 |
acatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaattggtcaaat |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34916189 |
acatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaattggtcaaat |
34916090 |
T |
|
| Q |
356 |
ggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgataccaggctttctatgtacctttttgaagactatcagaccca |
455 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34916089 |
ggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgataccaggctttctatgtacctttttgaagactatcagaccca |
34915990 |
T |
|
| Q |
456 |
ttatcatctgaagcttaattttcaacttagcgtcatgtaagttatttgatctttaatagtattatggaaaactggtataatattcatggttat |
548 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34915989 |
ttatcatctgaagcttaattttcaacttagcgtcatgtaagttatttgatctttaatagtattatggaaaactggtatgatattcatggttat |
34915897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 16 - 349
Target Start/End: Complemental strand, 34916705 - 34916372
Alignment:
| Q |
16 |
aatatacgagggtgactgggttgatggaaaagtgacggggaaagggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactt |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34916705 |
aatatacgagggtgactgggttgatggaaaagtgacagggaaagggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactt |
34916606 |
T |
|
| Q |
116 |
tcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggcta |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34916605 |
tcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggcta |
34916506 |
T |
|
| Q |
216 |
acgatgatgttttcaatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtctacactggaaatt-ggaaaa |
314 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||| |||||| |
|
|
| T |
34916505 |
acgatgatgttttcgatggttattggtcaaatggacataaacatggatatggagtttatagatttgcaaatggggatgtctatgctggaaattgggaaaa |
34916406 |
T |
|
| Q |
315 |
ataataaaatggatggaagagggattatgaattgg |
349 |
Q |
| |
|
| | |||| |||||||| |||||||||||||||| |
|
|
| T |
34916405 |
aggagaaaa-ggatggaaaagggattatgaattgg |
34916372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 131 - 539
Target Start/End: Complemental strand, 34544939 - 34544538
Alignment:
| Q |
131 |
gtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttca |
230 |
Q |
| |
|
|||||||||| ||||||||| | ||||||| ||| |||||| |||| | ||| | |||||| |||||||||||| |||| ||| | ||||||||||| |
|
|
| T |
34544939 |
gtttatagatttgcaaatggggatgtctacattggtaattggaaaaatgataaaatggatggaagagggattatgaattgggttaatggtgatgttttca |
34544840 |
T |
|
| Q |
231 |
atggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatgg |
330 |
Q |
| |
|
|||| | ||||||||||||||| | |||||| |||||||||||||||||| ||||||| |||||||| | ||||||| |||||| |||||||||| || |
|
|
| T |
34544839 |
atggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtctacgcaggaaattttaaaaatgataaaatggacgg |
34544740 |
T |
|
| Q |
331 |
aagagggattatgaattggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgataccaggctttctatgt |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34544739 |
aagagggattatgaattggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgataccaggctttctatgt |
34544640 |
T |
|
| Q |
431 |
acctttttgaagactatcagacccattatcatctgaagcttaattttcaacttagcgtcatgtaagttatttgatctttaatagtattatggaaaactgg |
530 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34544639 |
gcatttttgaagactatcagacccattattatctgaagcttaattttcaa-------tcatgtaagttatttgatctttaatagtattatggaaaactgg |
34544547 |
T |
|
| Q |
531 |
tataatatt |
539 |
Q |
| |
|
|||| |||| |
|
|
| T |
34544546 |
tatattatt |
34544538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 53 - 315
Target Start/End: Complemental strand, 34533967 - 34533705
Alignment:
| Q |
53 |
gggaaagggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaa |
152 |
Q |
| |
|
|||||||||||||||||||||| | |||||| | |||| |||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||| |
|
|
| T |
34533967 |
gggaaagggattatgaattgggttgatggtgatgtttttgatggttgttggtcaaatagacttaaagatggatatggagtttatagatatgcaaatgggg |
34533868 |
T |
|
| Q |
153 |
acgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggaca |
252 |
Q |
| |
|
| ||| |||||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| | || ||||||| |||||| |||||||||||||| |
|
|
| T |
34533867 |
atgtccacactggacattggaaaaaagggggaaatgatggaaaagggattatgagatgggctaatggtgttgttttcgatggttgttggtcaaatggact |
34533768 |
T |
|
| Q |
253 |
gaaacatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaa |
315 |
Q |
| |
|
| |||||| |||||||||| ||||||| ||||||| |||||| ||| |||| |||||||||| |
|
|
| T |
34533767 |
tagacatggatatggagtttgtagatttacaaatggggatgtccacagtggacattggaaaaa |
34533705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 56 - 345
Target Start/End: Complemental strand, 34916527 - 34916238
Alignment:
| Q |
56 |
aaagggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacg |
155 |
Q |
| |
|
|||||||||||||| |||| ||| | || | |||||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||||||| | | |
|
|
| T |
34916527 |
aaagggattatgaaatgggctaacgatgatgttttcgatggttattggtcaaatggacataaacatggatatggagtttatagatttgcaaatggggatg |
34916428 |
T |
|
| Q |
156 |
tctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaa |
255 |
Q |
| |
|
|||| ||||||||||||||||||| |||| | ||||||||||||||||||| |||| ||| | || | ||||| ||||||||||||||||||||| |
|
|
| T |
34916427 |
tctatgctggaaattgggaaaaaggagaaaaggatggaaaagggattatgaattggggtaatggtgctattttcgatggttattggtcaaatggactttc |
34916328 |
T |
|
| Q |
256 |
acatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaa |
345 |
Q |
| |
|
|||||| |||||||||||||||| ||| |||||| | |||||||||||||||||| |||| ||| |||||||| |||||||||||| |
|
|
| T |
34916327 |
acatggatatggagtttatagatctgctaatggaaacgtctacactggaaattgggaaaaaggggaaagggatggaaaagggattatgaa |
34916238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 16 - 315
Target Start/End: Complemental strand, 34534142 - 34533843
Alignment:
| Q |
16 |
aatatacgagggtgactgggttgatggaaaagtgacggggaaagggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactt |
115 |
Q |
| |
|
|||||| ||||| || |||||||||||| || |||| ||||||| ||||||||| |||| |||| || | ||||||||||||||||||||||||||||| |
|
|
| T |
34534142 |
aatatatgagggcgattgggttgatggacaaatgacagggaaagagattatgaagtgggttaatagttgtgttttcgatggttgttggtcaaatggactt |
34534043 |
T |
|
| Q |
116 |
tcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggcta |
215 |
Q |
| |
|
||||||| |||| |||||||||| || ||||||| | || || | |||||||||||||| ||| ||| |||| |||||||||||||| |||| | |
|
|
| T |
34534042 |
aaacatggacatggggtttatagatatgtaaatggagatgtttatagaggaaattgggaaaatgggaaaatagatgggaaagggattatgaattgggttg |
34533943 |
T |
|
| Q |
216 |
acgatgatgttttcaatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaa |
315 |
Q |
| |
|
| | ||||||||| |||||| |||||||||| ||| ||| |||| |||||||||||||||| ||||||||| |||||| |||||||| |||||||||| |
|
|
| T |
34533942 |
atggtgatgtttttgatggttgttggtcaaatagacttaaagatggatatggagtttatagatatgcaaatggggatgtccacactggacattggaaaaa |
34533843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 56 - 315
Target Start/End: Complemental strand, 34533826 - 34533567
Alignment:
| Q |
56 |
aaagggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacg |
155 |
Q |
| |
|
||||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | ||||||| | | |
|
|
| T |
34533826 |
aaagggattatgagatgggctaatggtgttgttttcgatggttgttggtcaaatggacttagacatggatatggagtttgtagatttacaaatggggatg |
34533727 |
T |
|
| Q |
156 |
tctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaa |
255 |
Q |
| |
|
|| ||| |||| ||||| |||||||||||| | ||||||||||||||| || |||||| || |||||||||| |||||| ||||| |||||||| || |
|
|
| T |
34533726 |
tccacagtggacattggaaaaaaggggaaaaggatggaaaagggattaagagatgggcaggcggtgatgttttcgatggttgttggtaaaatggacttaa |
34533627 |
T |
|
| Q |
256 |
acatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaa |
315 |
Q |
| |
|
|||||| | ||||||||||| || ||| ||||| |||||||| | |||||| |||||||| |
|
|
| T |
34533626 |
acatggatctggagtttatacatatgctaatggggatgtctatattggaaaatggaaaaa |
34533567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 58 - 349
Target Start/End: Original strand, 39848483 - 39848777
Alignment:
| Q |
58 |
agggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtc |
157 |
Q |
| |
|
||||||||||| ||||| || ||| | | | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||| |
|
|
| T |
39848483 |
agggattatgagttgggatactggagatgtcttctatggttgttggtcaaatggacttgcacatggatatggagtttatagatccgcaaatggggatgtc |
39848582 |
T |
|
| Q |
158 |
tacactggaaattgggaaaaaggggaaaggcatg---gaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacaga |
254 |
Q |
| |
|
| || |||||||||| ||| | || ||| | ||| | | || |||| | | |||||||| | ||||||||| |||||| | ||||||||||| | |
|
|
| T |
39848583 |
tccattggaaattggaaaacatggaaaatggatgatgggagagcgattttcgattgggctaatggtgatgtttttgatggttgtatgtcaaatggactta |
39848682 |
T |
|
| Q |
255 |
aacatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaattgg |
349 |
Q |
| |
|
|||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||| ||||||||||| |||| |
|
|
| T |
39848683 |
gacatggatttggagtttatagatttgcaaatggggatgtctacatcggaaattggaaaaaagacaaaatggatggaacagggattatgagttgg |
39848777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 56 - 349
Target Start/End: Original strand, 38632770 - 38633065
Alignment:
| Q |
56 |
aaagggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacg |
155 |
Q |
| |
|
||||| ||||||| ||||| || ||||| | | |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| | | |
|
|
| T |
38632770 |
aaaggaattatgagttgggctactggtgatgtcttcgatggttgttggtcagatggacttatacatggatttggagtttatagatctgcaaatggggatg |
38632869 |
T |
|
| Q |
156 |
tctacactggaaattgggaaaaaggggaaagg---catggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggaca |
252 |
Q |
| |
|
||||||||||||||||| ||| || ||| | |||| | | ||||| || | | ||||||| ||||||||| ||||||||| ||||||||||| |
|
|
| T |
38632870 |
tctacactggaaattggaaaatagacaaaatggattatgggagatggattttggattcagctaacggtgatgtttttgatggttatttgtcaaatggact |
38632969 |
T |
|
| Q |
253 |
gaaacatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaattgg |
349 |
Q |
| |
|
| | |||| | ||||||||||| |||||||||||| ||||| ||| |||||||||||||| | ||||||||||||| ||||||||||| |||| |
|
|
| T |
38632970 |
tagatatggatttggagtttataaatttgcaaatggggatgtttacgtaggaaattggaaaaa-gacaaaatggatggaatagggattatgacttgg |
38633065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 104 - 314
Target Start/End: Original strand, 38632682 - 38632890
Alignment:
| Q |
104 |
tcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggatta |
203 |
Q |
| |
|
||||||||| || |||||||| |||||||||||||| |||| |||| | ||||||| ||||||||| |||||| || | |||||||||| |||| |
|
|
| T |
38632682 |
tcaaatggatttagacatggatttggagtttatagatatgcagatgggcatgtctacatgggaaattggaaaaaagac--aatggatggaaaaggaatta |
38632779 |
T |
|
| Q |
204 |
tgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtctacactgg |
303 |
Q |
| |
|
||| ||||||| | |||||| ||| |||||| ||||||| |||||| | |||||| | |||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
38632780 |
tgagttgggctactggtgatgtcttcgatggttgttggtcagatggacttatacatggatttggagtttatagatctgcaaatggggatgtctacactgg |
38632879 |
T |
|
| Q |
304 |
aaattggaaaa |
314 |
Q |
| |
|
||||||||||| |
|
|
| T |
38632880 |
aaattggaaaa |
38632890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 69 - 295
Target Start/End: Original strand, 39848635 - 39848861
Alignment:
| Q |
69 |
attggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaa |
168 |
Q |
| |
|
|||||| |||||||| | |||| ||||||||| ||||||||||||| |||||||| |||||||||||||| ||||||||| | ||||||| ||||| |
|
|
| T |
39848635 |
attgggctaatggtgatgtttttgatggttgtatgtcaaatggacttagacatggatttggagtttatagatttgcaaatggggatgtctacatcggaaa |
39848734 |
T |
|
| Q |
169 |
ttgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaaacatggctatgga |
268 |
Q |
| |
|
|||| |||||| ||| | |||||| ||||||||||| |||| | | |||||| ||| |||||| |||||||||||||| | |||||| |||||| |
|
|
| T |
39848735 |
ttggaaaaaagacaaaatggatggaacagggattatgagttgggttgttggtgatgtcttcgatggttgttggtcaaatggacttatacatggatatgga |
39848834 |
T |
|
| Q |
269 |
gtttatagatttgcaaatggagatgtc |
295 |
Q |
| |
|
|||||||||| ||| || || |||||| |
|
|
| T |
39848835 |
gtttatagatatgctaacggggatgtc |
39848861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 78 - 349
Target Start/End: Complemental strand, 38453968 - 38453697
Alignment:
| Q |
78 |
atggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgggaaaa |
177 |
Q |
| |
|
|||||| | |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| | || |||||||||||||| || |
|
|
| T |
38453968 |
atggtgatgtttttgatggttgttggtcaaatagacttgtacatggatatggagtttatagatctgtaaatggggatgttaacactggaaattggaaagc |
38453869 |
T |
|
| Q |
178 |
aggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaaacatggctatggagtttataga |
277 |
Q |
| |
|
|||| | | |||||| ||||||| |||| ||| |||||| |||| || |||||| | ||| |||||| | |||||| ||||||||||||| |
|
|
| T |
38453868 |
agggagattggatggaagagggattttgaattggactaacggtgatcaatttgatggttgtctgtcgcatggacttagacatggacttggagtttataga |
38453769 |
T |
|
| Q |
278 |
tttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaattgg |
349 |
Q |
| |
|
|||| |||||| ||||||||||| |||||||||||| | | |||||||||||| |||||| |||| |||| |
|
|
| T |
38453768 |
tttgtaaatggggatgtctacaccggaaattggaaagaagacgaaatggatggaacagggatcatgagttgg |
38453697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 34539180 - 34539027
Alignment:
| Q |
141 |
ctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattg |
240 |
Q |
| |
|
|||||||||| | ||||| | |||||||||| ||||| || |||| ||||||| ||||||||||| |||||||| | |||||||| ||||||| ||| |
|
|
| T |
34539180 |
ctgcaaatggcgatgtctataatggaaattggaaaaaaaggaaaagagatggaaatgggattatgaattgggctaatggcgatgtttttaatggttgttg |
34539081 |
T |
|
| Q |
241 |
gtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgt |
294 |
Q |
| |
|
||||||||||| | |||||| | |||||||||||||||||||||||| ||||| |
|
|
| T |
34539080 |
gtcaaatggacttagacatggttctggagtttatagatttgcaaatggggatgt |
34539027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 108 - 295
Target Start/End: Complemental strand, 38453800 - 38453613
Alignment:
| Q |
108 |
atggactttcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaa |
207 |
Q |
| |
|
|||||||| ||||||| |||||||||||||| || |||||| | |||||||| ||||||||| || ||| |||| | |||||| |||||| |||| |
|
|
| T |
38453800 |
atggacttagacatggacttggagtttatagatttgtaaatggggatgtctacaccggaaattggaaagaagacgaaatggatggaacagggatcatgag |
38453701 |
T |
|
| Q |
208 |
atgggctaacgatgatgttttcaatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtc |
295 |
Q |
| |
|
|||||||| | ||||||||| |||||| |||||||||||||| | |||||| | |||||||| ||||||||||||||| |||||| |
|
|
| T |
38453700 |
ttgggctaatggtgatgtttttgatggttgttggtcaaatggacttatacatggatctggagtttttagatttgcaaatggggatgtc |
38453613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 34544874 - 34544762
Alignment:
| Q |
58 |
agggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtc |
157 |
Q |
| |
|
||||||||||||||||| |||||||| | ||||| |||| |||||||||||||||| | ||||||||||||||||||||||| | ||||||| || ||| |
|
|
| T |
34544874 |
agggattatgaattgggttaatggtgatgttttcaatggatgttggtcaaatggacatagacatggatatggagtttatagattttcaaatgggaatgtc |
34544775 |
T |
|
| Q |
158 |
tacactggaaatt |
170 |
Q |
| |
|
||| | ||||||| |
|
|
| T |
34544774 |
tacgcaggaaatt |
34544762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 353 - 512
Target Start/End: Complemental strand, 34538968 - 34538809
Alignment:
| Q |
353 |
aatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgataccaggctttctatgtacctttttgaagactatcagac |
452 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||| ||| || |||||| ||| ||||||||| || || |||| | ||| | |||| |||| | |
|
|
| T |
34538968 |
aatggaacaatatacgagggcgattgggtggatggagaaaggacagggaacaaattcatgataccaagccttgtatggagatttcttaagagaatcaaat |
34538869 |
T |
|
| Q |
453 |
ccattatcatctgaagcttaattttcaacttagcgtcatgtaagttatttgatctttaat |
512 |
Q |
| |
|
| ||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||||||| |
|
|
| T |
34538868 |
ctattattatctgaagcttaattttcaacatagcatcatgtaagttatttcatctttaat |
34538809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 38453712 - 38453620
Alignment:
| Q |
58 |
agggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatgg |
150 |
Q |
| |
|
|||||| |||| ||||| |||||||| | |||| |||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||| |
|
|
| T |
38453712 |
agggatcatgagttgggctaatggtgatgtttttgatggttgttggtcaaatggacttatacatggatctggagtttttagatttgcaaatgg |
38453620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 34539124 - 34539033
Alignment:
| Q |
59 |
gggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatgg |
150 |
Q |
| |
|
|||||||||||||||| |||||| | | |||| ||||||||||||||||||||||| |||||| | |||||||||||||| ||||||||| |
|
|
| T |
34539124 |
gggattatgaattgggctaatggcgatgtttttaatggttgttggtcaaatggacttagacatggttctggagtttatagatttgcaaatgg |
34539033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 34549262 - 34549179
Alignment:
| Q |
78 |
atggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtctaca |
161 |
Q |
| |
|
|||||| | |||| |||||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||| || ||||||| |
|
|
| T |
34549262 |
atggtgatgtttttgatggttgttggtctaatggacttacacatggatatggagtttatagattttcaaatgggaatgtctaca |
34549179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 349
Target Start/End: Complemental strand, 34534073 - 34533947
Alignment:
| Q |
223 |
tgttttcaatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaa |
322 |
Q |
| |
|
||||||| |||||| |||||||||||||| |||||||| |||| |||||||||| || |||||||||||| || | ||||||||| ||||| ||| |
|
|
| T |
34534073 |
tgttttcgatggttgttggtcaaatggacttaaacatggacatggggtttatagatatgtaaatggagatgtttatagaggaaattgggaaaatgggaaa |
34533974 |
T |
|
| Q |
323 |
atggatggaagagggattatgaattgg |
349 |
Q |
| |
|
|| ||||| | |||||||||||||||| |
|
|
| T |
34533973 |
atagatgggaaagggattatgaattgg |
34533947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 39848762 - 39848844
Alignment:
| Q |
58 |
agggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagat |
140 |
Q |
| |
|
||||||||||| ||||| | ||||| | | ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39848762 |
agggattatgagttgggttgttggtgatgtcttcgatggttgttggtcaaatggacttatacatggatatggagtttatagat |
39848844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 156 - 313
Target Start/End: Complemental strand, 38454028 - 38453871
Alignment:
| Q |
156 |
tctacactggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaa |
255 |
Q |
| |
|
||||||||||||||||| |||||| |||| |||||| ||||| ||||| ||| || | | ||||||||| |||||| |||||||||| ||| |
|
|
| T |
38454028 |
tctacactggaaattggaaaaaagataaaagagatggaagagggactatgagttggcctgatggtgatgtttttgatggttgttggtcaaatagacttgt |
38453929 |
T |
|
| Q |
256 |
acatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaa |
313 |
Q |
| |
|
|||||| |||||||||||||||| || |||||| ||||| ||||||||||||||||| |
|
|
| T |
38453928 |
acatggatatggagtttatagatctgtaaatggggatgttaacactggaaattggaaa |
38453871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 87 - 295
Target Start/End: Original strand, 38632942 - 38633149
Alignment:
| Q |
87 |
ttttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaag |
186 |
Q |
| |
|
|||| ||||||| || ||||||||||||| | |||||| ||||||||||| || ||||||||| | || ||| ||||||||| |||||| ||| |
|
|
| T |
38632942 |
tttttgatggttatttgtcaaatggacttagatatggatttggagtttataaatttgcaaatggggatgtttacgtaggaaattgg-aaaaagacaaaat |
38633040 |
T |
|
| Q |
187 |
gcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaat |
286 |
Q |
| |
|
| |||||| ||||||||||| ||||||| | |||||| ||| |||||| |||||||||||| | | |||||| | |||||||||||||| ||| ||| |
|
|
| T |
38633041 |
ggatggaatagggattatgacttgggctactggtgatgtcttcgatggttgttggtcaaatgggcttatacatggatctggagtttatagatatgctaat |
38633140 |
T |
|
| Q |
287 |
ggagatgtc |
295 |
Q |
| |
|
|| |||||| |
|
|
| T |
38633141 |
ggggatgtc |
38633149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 38633050 - 38633142
Alignment:
| Q |
58 |
agggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatgg |
150 |
Q |
| |
|
||||||||||| ||||| || ||||| | | ||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||| ||||| |
|
|
| T |
38633050 |
agggattatgacttgggctactggtgatgtcttcgatggttgttggtcaaatgggcttatacatggatctggagtttatagatatgctaatgg |
38633142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 39848264 - 39848360
Alignment:
| Q |
76 |
taatggtgctattttcgatggttgttggtcaaatggactttc-acatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgg |
172 |
Q |
| |
|
|||||||| | |||| |||||||||||||||||| ||||| | ||||||||||||||| ||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
39848264 |
taatggtgatgtttttaatggttgttggtcaaatg-actttgtatatggatatggagtttttagatttgcaaatggtgacgtctacactggaaattgg |
39848360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 34534156 - 34534101
Alignment:
| Q |
347 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
402 |
Q |
| |
|
|||||| |||||||||| || |||||||||||||||||||||||||||| |||||| |
|
|
| T |
34534156 |
tggtcagatggaacaatatatgagggcgattgggttgatggacaaatgacagggaa |
34534101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 34548613 - 34548518
Alignment:
| Q |
58 |
agggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaa |
153 |
Q |
| |
|
||||||||||| |||| |||||||| ||||||||||||| | |||||||||||| || |||||||| || |||||||| || ||||| |||||| |
|
|
| T |
34548613 |
agggattatgatgtgggctaatggtgatattttcgatggtggctggtcaaatggagttagacatggatttgaagtttatatatttgcaactggaaa |
34548518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 38632551 - 38632625
Alignment:
| Q |
76 |
taatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatgg |
150 |
Q |
| |
|
|||||||| | |||| |||| ||||||||||||||||||| |||||||| |||||||| |||| |||||||||| |
|
|
| T |
38632551 |
taatggtgatgttttggatgcttgttggtcaaatggacttctacatggatttggagtttttagagctgcaaatgg |
38632625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 34544985 - 34544940
Alignment:
| Q |
16 |
aatatacgagggtgactgggttgatggaaaagtgacggggaaaggg |
61 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
34544985 |
aatatacgagggtgactgggttgatggaaaaatgacagggaaaggg |
34544940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 39848308 - 39848361
Alignment:
| Q |
258 |
atggctatggagtttatagatttgcaaatggagatgtctacactggaaattgga |
311 |
Q |
| |
|
|||| |||||||||| ||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
39848308 |
atggatatggagtttttagatttgcaaatggtgacgtctacactggaaattgga |
39848361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 299
Target Start/End: Complemental strand, 34549258 - 34549179
Alignment:
| Q |
220 |
tgatgttttcaatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtctaca |
299 |
Q |
| |
|
||||||||| |||||| |||||| ||||||| | |||||| |||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
34549258 |
tgatgtttttgatggttgttggtctaatggacttacacatggatatggagtttatagattttcaaatgggaatgtctaca |
34549179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 38454037 - 38453973
Alignment:
| Q |
285 |
atggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaattgg |
349 |
Q |
| |
|
|||||| | |||||||||||||||||||||| |||||| ||||||||||||| ||||| |||| |
|
|
| T |
38454037 |
atggaggtatctacactggaaattggaaaaaagataaaagagatggaagagggactatgagttgg |
38453973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 402
Target Start/End: Complemental strand, 34544995 - 34544944
Alignment:
| Q |
351 |
caaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
402 |
Q |
| |
|
||||||||||||| |||||||| || |||||||||||| |||||| |||||| |
|
|
| T |
34544995 |
caaatggaacaatatacgagggtgactgggttgatggaaaaatgacagggaa |
34544944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 290
Target Start/End: Original strand, 36951420 - 36951547
Alignment:
| Q |
163 |
tggaaattgggaaaaaggggaaaggcatggaaaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaaacatggc |
262 |
Q |
| |
|
|||||||||| |||||||| ||| |||||| ||||||||||| ||| ||||| |||||||| |||||| ||||| |||||||| | ||| || |
|
|
| T |
36951420 |
tggaaattggaaaaaagggaaaatagatggaagggggattatgaagtggtttaacggcgatgtttttgatggttgttggttaaatggacttagacaagga |
36951519 |
T |
|
| Q |
263 |
tatggagtttatagatttgcaaatggag |
290 |
Q |
| |
|
| |||||||||||||||| || |||||| |
|
|
| T |
36951520 |
tctggagtttatagattttcagatggag |
36951547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 256 - 349
Target Start/End: Original strand, 38632696 - 38632787
Alignment:
| Q |
256 |
acatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaattgg |
349 |
Q |
| |
|
|||||| | |||||||||||||| |||| |||| ||||||||| ||||||||||||| || | ||||||||||| ||| ||||||| |||| |
|
|
| T |
38632696 |
acatggatttggagtttatagatatgcagatgggcatgtctacatgggaaattggaaaa--aagacaatggatggaaaaggaattatgagttgg |
38632787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 34539179 - 34539110
Alignment:
| Q |
280 |
tgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggattatgaattgg |
349 |
Q |
| |
|
||||||||| |||||||| | ||||||||||||||| | |||| ||||||| ||||||||||||||| |
|
|
| T |
34539179 |
tgcaaatggcgatgtctataatggaaattggaaaaaaaggaaaagagatggaaatgggattatgaattgg |
34539110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 36951454 - 36951535
Alignment:
| Q |
59 |
gggattatgaattggggtaatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagat |
140 |
Q |
| |
|
||||||||||| ||| ||| || | | |||| ||||||||||||| |||||||||| ||| |||| |||||||||||||| |
|
|
| T |
36951454 |
gggattatgaagtggtttaacggcgatgtttttgatggttgttggttaaatggacttagacaaggatctggagtttatagat |
36951535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 415
Target Start/End: Complemental strand, 34548924 - 34548856
Alignment:
| Q |
347 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgata |
415 |
Q |
| |
|
|||||||| ||||||| || || |||||||||||||||||| |||||| |||||| ||| | |||||| |
|
|
| T |
34548924 |
tggtcaaacagaacaatatatgaaggcgattgggttgatggaaaaatgacagggaaaggactaatgata |
34548856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 547 - 623
Target Start/End: Original strand, 18334844 - 18334920
Alignment:
| Q |
547 |
atagccgttggttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgcctac |
623 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18334844 |
atagccgttggttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgcctac |
18334920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 94 - 338
Target Start/End: Original strand, 44474388 - 44474632
Alignment:
| Q |
94 |
tggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatggaaacgtctacactggaaattgggaaaaaggggaaaggcatgga |
193 |
Q |
| |
|
||||| |||||||||||| ||| |||||||| |||||||| || |||| | |||| | |||||| ||||||||||| ||| |||| || | ||||| |
|
|
| T |
44474388 |
tggttcttggtcaaatggccttgtacatggatttggagtttttacatctctagatggggatgtctacgctggaaattggaaaacagggaaattggatgga |
44474487 |
T |
|
| Q |
194 |
aaagggattatgaaatgggctaacgatgatgttttcaatggttattggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatg |
293 |
Q |
| |
|
| ||||| | |||| |||||||| |||||| ||| ||||||| | ||||||||| | | |||||| | ||||||||||| ||||| |||||| |||| |
|
|
| T |
44474488 |
agagggaatttgaattgggctaatgatgatcattttaatggttgtctgtcaaatgggcttagacatggatttggagtttatacatttgtaaatggggatg |
44474587 |
T |
|
| Q |
294 |
tctacactggaaattggaaaaataataaaatggatggaagaggga |
338 |
Q |
| |
|
|||| | ||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
44474588 |
tctatatcggaaattggaaaaatgacaaaatggatggaagaggga |
44474632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 44474646 - 44474720
Alignment:
| Q |
76 |
taatggtgctattttcgatggttgttggtcaaatggactttcacatggatatggagtttatagatctgcaaatgg |
150 |
Q |
| |
|
|||||||| | |||| || ||||| ||||||||||||||| |||||||| |||||||| || || ||||||||| |
|
|
| T |
44474646 |
taatggtgatgtttttgaaggttgctggtcaaatggacttatacatggatctggagtttttaaatttgcaaatgg |
44474720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 76; Significance: 8e-35; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 547 - 622
Target Start/End: Original strand, 43000 - 43075
Alignment:
| Q |
547 |
atagccgttggttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgccta |
622 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43000 |
atagccgttggttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgccta |
43075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 553 - 617
Target Start/End: Complemental strand, 18151833 - 18151769
Alignment:
| Q |
553 |
gttggttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtat |
617 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
18151833 |
gttggttggttagaacatcctatctttagagacaaagatgggcgtgaactttatgtacgtcgtat |
18151769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 547 - 620
Target Start/End: Complemental strand, 18159318 - 18159245
Alignment:
| Q |
547 |
atagccgttggttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgcc |
620 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||| |
|
|
| T |
18159318 |
atagtcgttggttggttaggacatcctatctttaaagacaaagagaagcgtgagctttttgtacgacgtatgcc |
18159245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 2998210 - 2998265
Alignment:
| Q |
347 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
402 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||| ||||| || |||||| |
|
|
| T |
2998210 |
tggtcaaatggaacaatatatgagggtgattgggttgatgaacaaaggacagggaa |
2998265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0265 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0265
Description:
Target: scaffold0265; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 558 - 623
Target Start/End: Complemental strand, 2472 - 2407
Alignment:
| Q |
558 |
ttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgcctac |
623 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2472 |
ttggttaggacatcctatctttagagacaaataggggcgtgaactttttgtacgtcgtatgcctac |
2407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0265; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 558 - 623
Target Start/End: Complemental strand, 7361 - 7296
Alignment:
| Q |
558 |
ttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgcctac |
623 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7361 |
ttggttaggacatcctatctttagagacaaataggggcgtgaactttttgtacgtcgtatgcctac |
7296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 558 - 623
Target Start/End: Original strand, 21825449 - 21825514
Alignment:
| Q |
558 |
ttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgcctac |
623 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
21825449 |
ttggttaggacatcctatctttagagacaaataggggcgtgaactttttgtacgtcgtatgcctac |
21825514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 547 - 623
Target Start/End: Original strand, 270076 - 270152
Alignment:
| Q |
547 |
atagccgttggttggttaggacatcctatctttagagacaaagaggggcgtgaactttttgtacgtcgtatgcctac |
623 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||||||| ||||| || ||||| ||||||||||| ||||||||||| |
|
|
| T |
270076 |
atagctgttggatggttaggacatcccgtctttagagataaagaaggacgtgagctttttgtacgccgtatgcctac |
270152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 7045879 - 7045822
Alignment:
| Q |
238 |
ttggtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtc |
295 |
Q |
| |
|
|||||||||||||| | |||||| |||||||||| || ||||||||||||||||||| |
|
|
| T |
7045879 |
ttggtcaaatggacttatacatggatatggagtttttacatttgcaaatggagatgtc |
7045822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 7046004 - 7045896
Alignment:
| Q |
241 |
gtcaaatggacagaaacatggctatggagtttatagatttgcaaatggagatgtctacactggaaattggaaaaataataaaatggatggaagagggatt |
340 |
Q |
| |
|
||||||||||| | | |||| | ||||||||||| |||| |||||| ||||||||| |||||||||||| | | |||||||||||||||||||| |
|
|
| T |
7046004 |
gtcaaatggactcagagatggatttggagtttataaatttagaaatggtgatgtctacggaggaaattggaaagaagagaaaatggatggaagagggatc |
7045905 |
T |
|
| Q |
341 |
atgaattgg |
349 |
Q |
| |
|
|||| |||| |
|
|
| T |
7045904 |
atgagttgg |
7045896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 7045879 - 7045828
Alignment:
| Q |
100 |
ttggtcaaatggactttcacatggatatggagtttatagatctgcaaatgga |
151 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || || |||||||||| |
|
|
| T |
7045879 |
ttggtcaaatggacttatacatggatatggagtttttacatttgcaaatgga |
7045828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 7046093 - 7046043
Alignment:
| Q |
290 |
gatgtctacactggaaattggaaaaataataaaatggatggaagagggatt |
340 |
Q |
| |
|
||||||||||||||| ||||||||||| | |||||||||||| ||||||| |
|
|
| T |
7046093 |
gatgtctacactggatattggaaaaatgagaaaatggatggagaagggatt |
7046043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 415
Target Start/End: Complemental strand, 7045770 - 7045702
Alignment:
| Q |
347 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaatggattgatgata |
415 |
Q |
| |
|
||||||||||||||||||||||| ||| |||| ||||||| | || |||||| ||| ||| | |||||| |
|
|
| T |
7045770 |
tggtcaaatggaacaatgtacgaaggccattgtgttgatgaaaaagtgatagagaaaggactaatgata |
7045702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 7046220 - 7046172
Alignment:
| Q |
301 |
tggaaattggaaaaataataaaatggatggaagagggattatgaattgg |
349 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||||| ||| |||| |
|
|
| T |
7046220 |
tggaaattggaaaaaagataaaatggatggaaaagggattgtgagttgg |
7046172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 32714079 - 32714134
Alignment:
| Q |
347 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
402 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||| ||| || |||||| |
|
|
| T |
32714079 |
tggtcaaatggaacaatatatgagggtgattgggttgatggaaaaaggacagggaa |
32714134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 32716493 - 32716548
Alignment:
| Q |
347 |
tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaatgatagggaa |
402 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||| ||| || |||||| |
|
|
| T |
32716493 |
tggtcaaatggaacaatatatgagggtgattgggttgatggaaaaaggacagggaa |
32716548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 32717128 - 32717172
Alignment:
| Q |
16 |
aatatacgagggtgactgggttgatggaaaagtgacggggaaagg |
60 |
Q |
| |
|
||||||||||||||| ||||||||||||| | |||| |||||||| |
|
|
| T |
32717128 |
aatatacgagggtgattgggttgatggaagaatgactgggaaagg |
32717172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 14905006 - 14904961
Alignment:
| Q |
16 |
aatatacgagggtgactgggttgatggaaaagtgacggggaaaggg |
61 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
14905006 |
aatatatgagggtgactgggttgatggaaaaaagacagggaaaggg |
14904961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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