View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16064_low_22 (Length: 264)
Name: NF16064_low_22
Description: NF16064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16064_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 3 - 249
Target Start/End: Complemental strand, 39417785 - 39417539
Alignment:
| Q |
3 |
tatgatgttttagtttttatattttctctaatttgtttagtactagtacttttaattggttactacatttcttagaagcttttaaaaacttgtcacattg |
102 |
Q |
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| T |
39417785 |
tatgatgttttagtttttatattttctctaatttggttagtactagtacttttaattggttactacatttcttagaagcttttaaaaacttgtcacattg |
39417686 |
T |
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| Q |
103 |
agtagttttcattgtggcaatgcttctatatttatgttaaatgttaaactatgtatgattggggaaattatcaagtgatgttaaaattatcgagaagtta |
202 |
Q |
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| T |
39417685 |
agtagttttcattgtggcaatgcttctatatttatgttaaatgttaaactatgtatgattggggaaattatcaagtgatgttaaaattatcgagaagtta |
39417586 |
T |
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| Q |
203 |
aaagttcaatgcaaaagtgtttaatttagttttgcttgttatctgtg |
249 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39417585 |
aaagttcaatgcaaaagtgtttaatttagttttgcttgttatttgtg |
39417539 |
T |
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