View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16067_high_1 (Length: 359)
Name: NF16067_high_1
Description: NF16067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16067_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 7 - 336
Target Start/End: Original strand, 7793739 - 7794068
Alignment:
| Q |
7 |
ttcgattgcaatgattagccactttgggtgtgcactgtccacttcaaaatgttgactttctcactttcatttacccacagacctctgttttctttggaat |
106 |
Q |
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| T |
7793739 |
ttcgattgcaattattagccactttgggtgtgcactgtccacttcaaaatgttgactttctcactttcacttacccacaaacctctgttttctttggaat |
7793838 |
T |
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| Q |
107 |
attttttcttatggcccaagaaggatggaataaggataaggttaatgtggagtagtttgttgggaccagacaatgaaatagaaaacaacataaacaataa |
206 |
Q |
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| T |
7793839 |
attttttcttatggcccaagaaggatggaataaggataaggttaatgtggagtaggttgttgggaccagacaatgaaatagaaaacaacataaacaataa |
7793938 |
T |
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| Q |
207 |
gacaaagattgtgtcacagtgcatttaggatgtgagaggtgaagagaggcataaatagagaagacagagttgaaaaatattgaagatgatgtgaactaaa |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7793939 |
gacaaagattgtgtcacagtgcatttaggatgtgagaggtgaagagaggcataaatagagaagacagagttgaaaaatattgaagatgatgtgatctaaa |
7794038 |
T |
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| Q |
307 |
ataaagataatagaaagggagacaatttta |
336 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
7794039 |
ataaagataatagaaagggagacaatttta |
7794068 |
T |
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