View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16067_high_11 (Length: 348)

Name: NF16067_high_11
Description: NF16067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16067_high_11
NF16067_high_11
[»] chr7 (7 HSPs)
chr7 (83-345)||(22612416-22612679)
chr7 (16-342)||(11657642-11657970)
chr7 (16-345)||(13474891-13475221)
chr7 (16-87)||(22611423-22611494)
chr7 (255-345)||(13773830-13773920)
chr7 (255-345)||(48378931-48379020)
chr7 (244-293)||(37943946-37943995)
[»] chr3 (10 HSPs)
chr3 (16-341)||(21100449-21100773)
chr3 (16-275)||(19186880-19187139)
chr3 (16-293)||(17793425-17793702)
chr3 (16-293)||(19101865-19102142)
chr3 (16-291)||(5941489-5941765)
chr3 (33-293)||(15958045-15958305)
chr3 (258-345)||(17959161-17959248)
chr3 (255-341)||(14057675-14057761)
chr3 (251-299)||(14479496-14479544)
chr3 (255-299)||(16942074-16942118)
[»] chr2 (5 HSPs)
chr2 (16-293)||(24788577-24788856)
chr2 (16-345)||(44583759-44584080)
chr2 (24-293)||(23651639-23651896)
chr2 (16-273)||(21553786-21554042)
chr2 (244-339)||(13362021-13362116)
[»] chr4 (6 HSPs)
chr4 (16-331)||(11558454-11558769)
chr4 (16-293)||(16282719-16282998)
chr4 (16-291)||(8808796-8809072)
chr4 (10-268)||(12230913-12231171)
chr4 (16-215)||(18218218-18218418)
chr4 (125-317)||(17338846-17339037)
[»] scaffold0166 (1 HSPs)
scaffold0166 (16-277)||(3417-3680)
[»] chr5 (3 HSPs)
chr5 (16-277)||(24760920-24761183)
chr5 (253-295)||(23950022-23950064)
chr5 (251-299)||(24829911-24829958)
[»] scaffold0145 (1 HSPs)
scaffold0145 (16-293)||(14717-14996)
[»] chr6 (2 HSPs)
chr6 (172-344)||(15118940-15119111)
chr6 (251-299)||(7680599-7680647)
[»] chr8 (3 HSPs)
chr8 (16-289)||(17883280-17883552)
chr8 (230-293)||(22553981-22554044)
chr8 (253-299)||(26859181-26859227)
[»] scaffold0218 (1 HSPs)
scaffold0218 (255-345)||(16534-16624)
[»] scaffold0091 (1 HSPs)
scaffold0091 (255-345)||(31186-31276)
[»] scaffold0063 (1 HSPs)
scaffold0063 (255-345)||(26065-26155)
[»] scaffold0061 (2 HSPs)
scaffold0061 (260-345)||(16665-16750)
scaffold0061 (260-345)||(25723-25808)
[»] scaffold0003 (1 HSPs)
scaffold0003 (255-345)||(132720-132810)
[»] chr1 (1 HSPs)
chr1 (255-345)||(51624858-51624947)
[»] scaffold0054 (1 HSPs)
scaffold0054 (253-298)||(71331-71376)
[»] scaffold0601 (1 HSPs)
scaffold0601 (230-317)||(4104-4191)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 83 - 345
Target Start/End: Original strand, 22612416 - 22612679
Alignment:
Q  83 tagtgcgtaggaaaggaagacaattatagc-aatggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaaggg 181  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22612416 tagtgcgtaggaaaggaagacaattatagcgaatggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaatcagagaaaaggg 22612515  T
Q  182 agaagaaaagcagacggagagaagcggaaccctagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcat 281  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22612516 agaagaaaagcagacagagagaagcggaaccctagtgcaacaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggagaatctcttcat 22612615  T
Q  282 ctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    ||||||||||||||||| | |||||| |||||||||||||| ||||||||||||||||||||||    
T  22612616 ctctagggtttaatattggcttgtggggatgtaaaggggttatagtaggagtgttgttatgatg 22612679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 342
Target Start/End: Complemental strand, 11657970 - 11657642
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagatt-ataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-a 113  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |    
T  11657970 ataaataaagagtcgtgggtgtagaaagtaagatttataataagtgggggaggggagaagtaaaagagtagtgtgtaggaaaggaagacaattatagcga 11657871  T
Q  114 atggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccc 213  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||||| |||||||    
T  11657870 atagtgagcccaaatataaataggaatattagggattagaaatcagttttgctaatcagagaaaagggagaagaaaagaagagggagagaagaggaaccc 11657771  T
Q  214 tagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgt 313  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||  |||||  | |||    
T  11657770 tagtgcagctacatcaagccaaaccaaaggtttctacggattcgaggtaagggtgagaatctcttcatttctagggtttaatattttgttgtgaggctgt 11657671  T
Q  314 aaaggggttgtagtaggagtgttgttatg 342  Q
    |||||||||  ||||| ||||||||||||    
T  11657670 aaaggggttacagtagaagtgttgttatg 11657642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 16 - 345
Target Start/End: Original strand, 13474891 - 13475221
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagcaat 115  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||| ||     
T  13474891 ataaataaagagtcgtggatgtagaaagtaagattataataagtgggggaggggagaagtaaaagagtagtgcataggaaatgaatacaattatagaaaa 13474990  T
Q  116 g-gtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
      |||||||||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||| ||||||||| |||| |||||||||| |||||||    
T  13474991 cagtgagcccaaatataaataggagtattagggattagaaatcagttttgctaattagagaaaaggaagaagaaaaccagagggagagaagctgaaccct 13475090  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgta 314  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||   |||||| | ||||    
T  13475091 agtgcagcaacatcgaggcaaatcgaaggtttctacggattcgaggtaaagggaagaatctcttcatctctagggtttaatattctattgtggggctgta 13475190  T
Q  315 aaggggttgtagtaggagtgttgttatgatg 345  Q
    |||||||| ||||| ||||||||||||||||    
T  13475191 aaggggttatagtaagagtgttgttatgatg 13475221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 22611423 - 22611494
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtg 87  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22611423 ataaataaagagtcgtgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagagtagtg 22611494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 13773830 - 13773920
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    ||||||||||||   |||||||||||||||||||||||| |||||  |||| | | |||||||||||| ||||| ||||||||||||||||    
T  13773830 tcgaggtaagggatagaatctcttcatctctagggtttattattttgttgtagggttgtaaaggggttatagtatgagtgttgttatgatg 13773920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 48379020 - 48378931
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    |||||||||||||  ||||||||||||||||||||||||||||||  |||| | | ||||||||||||  |||| ||||||||||||||||    
T  48379020 tcgaggtaagggga-gaatctcttcatctctagggtttaatattttgttgtagggttgtaaaggggttagagtatgagtgttgttatgatg 48378931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 37943946 - 37943995
Alignment:
Q  244 tttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
    |||| |||||||| ||||||| ||| |||||| |||||||||||||||||    
T  37943946 tttcgacggattcaaggtaagagggagaatctattcatctctagggttta 37943995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 341
Target Start/End: Original strand, 21100449 - 21100773
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagcaat 115  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  21100449 ataaataaagagtcgtgggtgtggaaagtaagattttaataagtgggggaggggagaagtaaaagagtactgcgtaagaaaggaagacaattatagcaat 21100548  T
Q  116 ggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaacccta 215  Q
     | ||||||||||||||||| ||||||||||||||| |||||| |||| || | ||||| |||||||||||| ||||||  |||||||||||||||||||    
T  21100549 tgcgagcccaaatataaataagaatattagggattaaaaatcaattttgctgatcagagtaaagggagaagagaagcagggggagagaagcggaacccta 21100648  T
Q  216 gtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaa 315  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| |||| |||||||||||| |||||||||||||||||  ||||||   |||||    
T  21100649 gtgcagcaacatcgagccaaaccgaaggtttctatggatttgaggtaa-ggggagaatctcttcatatctagggtttaatattttgttgtgggtctgtaa 21100747  T
Q  316 aggggttgtagtaggagtgttgttat 341  Q
    || ||||  || | ||||||||||||    
T  21100748 agaggttagaggatgagtgttgttat 21100773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 16 - 275
Target Start/End: Complemental strand, 19187139 - 19186880
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    |||| ||||||| | ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||    
T  19187139 ataattaaagagacgtgggtgtagaaagcaaaattataataagtgggggaggggagaagtaaaagagtagtgtgtaggaaaggaagacaattatagcgaa 19187040  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
    |  |||||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  19187039 taatgagccaaaatataaataggaatattagggattagaaatcagttttgctaat-agagaaaagggagaagaaaagcagagggagagaagcggaaccct 19186941  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatct 275  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  19186940 agggcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaaggaggagaatct 19186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 17793702 - 17793425
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||||| ||||||| ||||||||||||||  ||    
T  17793702 ataaataaagagttctgggtgtagaaagtaagattacaataagtggggaaggggataagtaaaagagtagtgcataggaaaagaagacaattatagtgaa 17793603  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
    | |||||| |||||||||||||||||||||||| ||| | || |||||| || |  |||||||||||||||||| |||||| | |||||||||||||| |    
T  17793602 tagtgagcgcaaatataaataggaatattaggggttacatataagttttgctgat-agagaaaagggagaagaatagcagaggaagagaagcggaaccgt 17793504  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  17793503 agtgcagcaacatcgagccaaaccgaaggtttctacagattcgaggtaagggggagaatctattcatctctagggttta 17793425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 19102142 - 19101865
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||||| ||||||| ||||||||||||||  ||    
T  19102142 ataaataaagagttctgggtgtagaaagtaagattacaataagtggggaaggggataagtaaaagagtagtgcataggaaaagaagacaattatagtgaa 19102043  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
    | |||||| |||||||||||||||||||||||| ||| | || |||||| || |  |||||||||||||||||| |||||| | |||||||||||||| |    
T  19102042 tagtgagcgcaaatataaataggaatattaggggttacatataagttttgctgat-agagaaaagggagaagaatagcagaggaagagaagcggaaccgt 19101944  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  19101943 agtgcagcaacatcgagccaaaccgaaggtttctacagattcgaggtaagggggagaatctattcatctctagggttta 19101865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 16 - 291
Target Start/End: Original strand, 5941489 - 5941765
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| || ||||| |||||||||| ||| ||| ||  |||||||| |||||||||  ||    
T  5941489 ataaataaagagtcatgggtgtagaaagtaagattttaataagtgaggaaggggggaagtaaaagagtattgcataaaaaaggaaggcaattatagagaa 5941588  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
    | ||||||| | ||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||||| ||||| | ||||||||||| ||||||    
T  5941589 tagtgagcctagatataaatatgaatattagggattagaaatcagttttgctgatcagagaaaagggagaagagaagcatagggagagaagcgaaaccct 5941688  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtt 291  Q
    |||| |||||||||| | |||||| |||||||||| ||||| |||||||||| | |||||| ||||||| |||||||    
T  5941689 agtgtagcaacatcgggtcaaaccaaaggtttctatggatttgaggtaagggagagaatctattcatctatagggtt 5941765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 293
Target Start/End: Original strand, 15958045 - 15958305
Alignment:
Q  33 ggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aatggtgagcccaaatata 131  Q
    ||||||||||||||||||  |||| |||||| | |||||||||||||  |||| || || ||||||| |  ||||||| | ||| |||||||||  ||||    
T  15958045 ggtgtagaaagtaagattgaaatatgtgggg-atgggagaagtaaaattgtagcgcatatgaaaggagggaaattataacgaatagtgagcccatgtata 15958143  T
Q  132 aataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccctagtgcagcaacatcgag 231  Q
    |||| |||||||||||||||||||| |||||| |||| |||||||||| || |||| ||| ||| ||||| | ||| ||| |||||||||| ||||  ||    
T  15958144 aataagaatattagggattagaaattagttttgctaatcagagaaaagagataagagaagaagaaggagaaatgcgaaactctagtgcagcgacatttag 15958243  T
Q  232 ccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
     | ||||||||||||||||||||| |||||||||||| |||||| |||||||| || |||||    
T  15958244 tccaaccgaaggtttctacggatttgaggtaagggggagaatctattcatctcaagagttta 15958305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 17959161 - 17959248
Alignment:
Q  258 aggtaagggggtgaatctcttcatctctagggtttaata-tttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| ||  || | ||||||||||||  |||| ||||||||||||||||    
T  17959161 aggtaagggggagaatctcttcatctctagggtttaatattttgattaagg-gttgtaaaggggttagagtatgagtgttgttatgatg 17959248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 341
Target Start/End: Original strand, 14057675 - 14057761
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttat 341  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||   ||| | | |||| |||||||| |||| ||||||||||||    
T  14057675 tcgaggtaaaggggagaatctcttcatctctagggtttattattttgctgtagggttgtagaggggttggagtatgagtgttgttat 14057761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 14479496 - 14479544
Alignment:
Q  251 ggattcgaggtaagggggtgaatctcttcatctctagggtttaatattt 299  Q
    |||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  14479496 ggattcgaggtaagggggagaatcttttcatctctagggtttattattt 14479544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 16942074 - 16942118
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaatattt 299  Q
    ||||||||||| || |||||||||||||||||||||||| |||||    
T  16942074 tcgaggtaaggcggagaatctcttcatctctagggtttattattt 16942118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 24788856 - 24788577
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||    
T  24788856 ataaataaagagtcgtgggtgtagaaagcaagattataataagtgggggaggggagaagtaaaagagtagtgcgtatgaaaggaagacaattatagcgaa 24788757  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaa-gggagaagaaaagcagacggagagaagcggaaccc 213  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||| || | | ||||||| |||||||||||| || | |||||||||||||||||    
T  24788756 tagtgagcccaaatataaataggaatattagggattagaaattagttttgctgatcggagaaaaagggagaagaaaaacaaagggagagaagcggaaccc 24788657  T
Q  214 tagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||  ||| | |||||||||||||||||    
T  24788656 tagtgcagcaacttctagccaaaccgaaggtttctacggattcgaggtaagggggataatatattcatctctagggttta 24788577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 16 - 345
Target Start/End: Original strand, 44583759 - 44584080
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    |||||||||||||| |||||||||||||||||||||||| ||   |||| ||||||||||||||| |||||| ||||||||| |||||||||||||| ||    
T  44583759 ataaataaagagtcgtgggtgtagaaagtaagattataacaaaaaggggtggggagaagtaaaagagtagtgtgtaggaaagcaagacaattatagcgaa 44583858  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
    |  |||||||||||||||||||||||||||||||||||||||||||||| ||         ||||||||| |||||||||| |||||||||||||| |||    
T  44583859 taatgagcccaaatataaataggaatattagggattagaaatcagttttgct---------aaagggagaggaaaagcagatggagagaagcggaatcct 44583949  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgta 314  Q
    |||||||||||||| || |||||| |||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||   |||||| ||||||    
T  44583950 agtgcagcaacatcaagtcaaaccaaaggtttctacggatttgaggtaagggggagaatctctccgtctctagggtttaatattctgttgtggggatgta 44584049  T
Q  315 aaggggttgtagtaggagtgttgttatgatg 345  Q
    || | ||| |||||| |||||||||||||||    
T  44584050 aatgagttatagtagcagtgttgttatgatg 44584080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 24 - 293
Target Start/End: Original strand, 23651639 - 23651896
Alignment:
Q  24 agagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatag-caatggtgagc 122  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||  |||||||||  | | |||| |    
T  23651639 agagtcgtgggtgtagaaagtaagattttaataagtgggggaggggagaagtaaaagagtagtgcgtagtaaagaaatgcaattatagagattagtgaac 23651738  T
Q  123 ccaaatataaataggaatattagggattagaaatcagt-ttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccctagtgcag 221  Q
    ||| |||||||||||||||||||||||||||||||||| ||  || | |||||              ||||| | | ||||||||||||||||| |||||    
T  23651739 ccatatataaataggaatattagggattagaaatcagtattggctgatcagag--------------aagcaaaggtagagaagcggaaccctaatgcag 23651824  T
Q  222 caacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  23651825 caacatcgagccaaactgaaggtatctacagattcgaggtaagggggagaatctattcatctctagggttta 23651896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 21553786 - 21554042
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    ||||||||||||||   |||||||| ||||||||   |||| |||||||||||||||| |||||  ||||  |||||||||||| ||  |  ||| | ||    
T  21553786 ataaataaagagtcggaggtgtagagagtaagatctaaatacgtgggggaggggagaattaaaatagtagcacgtaggaaaggagga--accataacgaa 21553883  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
    | ||||| |||  |||||||| |||||||||||||||||||||||||||  | | ||||| |||| ||||||| ||||||| |||||||| |||||| ||    
T  21553884 tagtgagtccatgtataaataagaatattagggattagaaatcagttttgttgatcagagtaaagagagaagagaagcagaaggagagaaacggaactct 21553983  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaat 273  Q
    |||||| | ||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  21553984 agtgcaacgacaccgagccaaaacgaaggtttctacggattcgaggtaagggggagaat 21554042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 339
Target Start/End: Complemental strand, 13362116 - 13362021
Alignment:
Q  244 tttctacggattcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgtt 339  Q
    |||| ||| |||| ||||||||||| ||||||||||||||||||||||||  ||||  |||||| | |||||||  || | |||| ||||||||||    
T  13362116 tttcgacgaattcaaggtaagggggagaatctcttcatctctagggtttatcatttaattgtggtgctgtaaagatgtcggagtatgagtgttgtt 13362021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 7e-77; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 16 - 331
Target Start/End: Complemental strand, 11558769 - 11558454
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagcaat 115  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||  ||| |||||||| | ||    
T  11558769 ataaatgaagagtcgtgggtgtagaaagtaagattttaataagtgggggaggggagaagtaaaagagtagtgcgtaagaaataaaggcaattataacgat 11558670  T
Q  116 g-gtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
      ||||||||| |||||||| |||||||||||| ||||||||||||||| || |  |||||||||  |||||| ||||||| ||||||||| ||||||||    
T  11558669 tagtgagcccatatataaatgggaatattagggtttagaaatcagttttgctgatgagagaaaagt-agaagagaagcagatggagagaagtggaaccct 11558571  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtttaatatttgt-ttgtggcgatgt 313  Q
    | |||| ||||||||||||||||||||||||||||||||||| |||||||| || ||||||  ||| ||||||||||| |||||| | |||||| |||||    
T  11558570 aatgcaacaacatcgagccaaaccgaaggtttctacggattctaggtaaggaggagaatctaatcaactctagggttt-atatttttattgtggggatgt 11558472  T
Q  314 aaaggggttgtagtagga 331  Q
    |||| ||||  |||||||    
T  11558471 aaagaggttagagtagga 11558454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 293
Target Start/End: Original strand, 16282719 - 16282998
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagcaat 115  Q
    |||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| |||||||  |||  |||| |||  ||    
T  16282719 ataaataaagagtcgtgggtgtagaaagtaagtttttaataagtgggggaggggagaagtaaaagagtagtgcataggaaataaaggtaattctagatat 16282818  T
Q  116 g-gtgagcccaaatataaataggaatattagggattagaaatcagttttt-ctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccc 213  Q
      |||||||||  |||| |||||||||||||||||||||||||||||||  ||||  || |||||||||||| | ||||| |  || ||||| |||||||    
T  16282819 tagtgagcccatttatatataggaatattagggattagaaatcagttttggctaataagggaaaagggagaaaagaagcaaagagaaagaagtggaaccc 16282918  T
Q  214 tagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
    || ||||||||||||||| |||||| || |||||||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  16282919 tactgcagcaacatcgagtcaaaccaaatgtttctacgggttcgaggtaagggggagaatctattcatctatagggttta 16282998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 291
Target Start/End: Complemental strand, 8809072 - 8808796
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    |||||||| |||||  |||||||||||||||||||  ||||||||| |||||||||||||||||  ||||  | ||||||| || |||||  ||| | ||    
T  8809072 ataaataaggagtcgagggtgtagaaagtaagatttaaataagtggtggaggggagaagtaaaattgtaggacataggaaaagaggacaaccataacgaa 8808973  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
    | |||| |||| ||||||||| ||||| ||| ||||||||||||||||| || | || ||||||| || || | ||||||| ||||||| ||||||||||    
T  8808972 tagtgatcccagatataaataagaataatagagattagaaatcagttttgctgatcaaagaaaagagataaaagaagcagaaggagagaggcggaaccct 8808873  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtt 291  Q
    |||||||| | |||||| |||||| |||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  8808872 agtgcagcgatatcgagtcaaaccaaaggtttctacggatttgaggtaagggggagaatctattcatctctagggtt 8808796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 10 - 268
Target Start/End: Complemental strand, 12231171 - 12230913
Alignment:
Q  10 aagaatataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattat 109  Q
    ||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||| ||  |||||||    
T  12231171 aagaaaataaataaagagtcgtgagtgtagaaagtaagattttaataagtgggggaggagagaagtaaaagagtagtgcttaggaaagaaaagcaattat 12231072  T
Q  110 agcaatgg-tgagcccaaatataaataggaatattagggattagaaatcagttttt-ctaaccagagaaaagggagaagaaaagcagacggagagaagcg 207  Q
    ||  ||   ||||||| | |||||||| |||||||||||||||||||||| ||||  || |  ||||||||||||||||| ||||| | ||||||||||     
T  12231071 agagattaatgagcccga-tataaataagaatattagggattagaaatcaattttggcttat-agagaaaagggagaagagaagcaaagggagagaagca 12230974  T
Q  208 gaaccctagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaaggggg 268  Q
    ||||||| ||| ||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  12230973 gaaccctcgtgtagcaacatcaagccaaactgaaggtttctacagattcgaggtaaggggg 12230913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 18218218 - 18218418
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagcaat 115  Q
    |||||||||||||| | ||| ||||||||||||||  |||||| |||||| |||||||||||||| ||||||||||| |||  | | |||||||| | ||    
T  18218218 ataaataaagagtcgttggtttagaaagtaagatttaaataagcgggggatgggagaagtaaaagagtagtgcgtagcaaataatggcaattataacgat 18218317  T
Q  116 g-gtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
      ||||||||| ||||||||  ||||||||||| ||||||||||||||| || |  || ||||||| |||||| ||||||| ||||||||| ||||||||    
T  18218318 tagtgagcccatatataaatgagaatattaggggttagaaatcagttttgcttatgagcgaaaaggtagaagagaagcagatggagagaagtggaaccct 18218417  T
Q  215 a 215  Q
    |    
T  18218418 a 18218418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 125 - 317
Target Start/End: Complemental strand, 17339037 - 17338846
Alignment:
Q  125 aaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccctagt-gcagca 223  Q
    |||||||||||||||||||||   |||||| |||||||| ||   ||||||||| ||| |||| || ||||  ||||||||| |||||||| | ||| ||    
T  17339037 aaatataaataggaatattagaatttagaagtcagttttgctggacagagaaaaaggaaaagagaaacaga--gagagaagcagaaccctaattgcaaca 17338940  T
Q  224 acatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaag 317  Q
    ||||| ||| ||||||||| |||  ||||| | |||||||  ||| ||||||||| ||||||||||||||||||||  |||||| |||||||||    
T  17338939 acatcaagcaaaaccgaagattttgacggagttgaggtaaatgggagaatctctttatctctagggtttaatattttgttgtggggatgtaaag 17338846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 16 - 277
Target Start/End: Complemental strand, 3680 - 3417
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagcaat 115  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||||| |||  ||||||||  ||    
T  3680 ataaataaagagtcgtgggtgtagaaagtaagattttaataagtgggggacgagagaagtaaaagagtagtgcgtaggaaagaaaggaaattatagagat 3581  T
Q  116 g-gtgagcccaaatataaataggaatattagggattagaaatcagttttt-ctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccc 213  Q
      |||||| || |||||||||||||||||| ||||||||||||||||||  || | ||||||||||||||||||  |||| | |||||||| | ||||||    
T  3580 tagtgagctcatatataaataggaatattatggattagaaatcagttttggctgatcagagaaaagggagaagaggagcatagggagagaacctgaaccc 3481  T
Q  214 tagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctct 277  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  3480 tagtgcaacaacaccgagccaaaccgaaggtttctaaggattcgaggtaagagggggaatctct 3417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 7e-71; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 16 - 277
Target Start/End: Complemental strand, 24761183 - 24760920
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagcaat 115  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||||| |||  ||||||||  ||    
T  24761183 ataaataaagagtcgtgggtgtagaaagtaagattttaataagtgggggacgagagaagtaaaagagtagtgcgtaggaaagaaaggaaattatagagat 24761084  T
Q  116 g-gtgagcccaaatataaataggaatattagggattagaaatcagttttt-ctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccc 213  Q
      |||||| || |||||||||||||||||| ||||||||||||||||||  || | ||||||||||||||||||  |||| | |||||||| | ||||||    
T  24761083 tagtgagctcatatataaataggaatattatggattagaaatcagttttggctgatcagagaaaagggagaagaggagcatagggagagaacctgaaccc 24760984  T
Q  214 tagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctct 277  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  24760983 tagtgcaacaacaccgagccaaaccgaaggtttctaaggattcgaggtaagagggggaatctct 24760920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 23950022 - 23950064
Alignment:
Q  253 attcgaggtaagggggtgaatctcttcatctctagggtttaat 295  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  23950022 attcgaggtaagggggagaatcttttcatctctagggtttaat 23950064  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 24829911 - 24829958
Alignment:
Q  251 ggattcgaggtaagggggtgaatctcttcatctctagggtttaatattt 299  Q
    |||||||||||||||||  ||||| |||||||||||||||||| |||||    
T  24829911 ggattcgaggtaagggga-gaatcgcttcatctctagggtttattattt 24829958  T

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Target: scaffold0145 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 16 - 293
Target Start/End: Complemental strand, 14996 - 14717
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagcaat 115  Q
    |||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| |||||||  |||  |||| |||  ||    
T  14996 ataaataaagagtcgtgggtgtagaaagtaagtttttaataagtgggggaggggagaagtaaaagagtagtgcataggaaataaaggtaattctagatat 14897  T
Q  116 g-gtgagcccaaatataaataggaatattagggattagaaatcagttttt-ctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccc 213  Q
      |||||||||  |||| |||||||||||||||||||||||||||||||  ||||  ||||||||||||||| | ||||| |  || ||||| |||||||    
T  14896 tagtgagcccatttatatataggaatattagggattagaaatcagttttggctaataagagaaaagggagaaaagaagcaaagagaaagaagtggaaccc 14797  T
Q  214 tagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
    || ||||||||||||||| |||||| || |||||||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  14796 tactgcagcaacatcgagtcaaaccaaatgtttctacgggttcgaggtaagggggagaatctattcatctatagggttta 14717  T

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Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 172 - 344
Target Start/End: Complemental strand, 15119111 - 15118940
Alignment:
Q  172 gagaaaagggagaagaaaagcagacggagagaagcggaaccctagtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtga 271  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||  ||    
T  15119111 gagaaaagggagaagaaaagaagacggagagaagcagaaccctagtgcagcaacatcgagctaaatcgaaggtttctac-gattcgaggtaaggggaaga 15119013  T
Q  272 atctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgat 344  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||||||| || ||| ||||||||||||||    
T  15119012 atctcttcatctctaggatttaatatttgtttgtgggaatgtaaaggggttataatagtagtgttgttatgat 15118940  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 7680599 - 7680647
Alignment:
Q  251 ggattcgaggtaagggggtgaatctcttcatctctagggtttaatattt 299  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  7680599 ggattcgaggtaagggggagaatctcttcatgtctagggtttattattt 7680647  T

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Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 289
Target Start/End: Complemental strand, 17883552 - 17883280
Alignment:
Q  16 ataaataaagagtcatgggtgtagaaagtaagattataataagtgggggaggggagaagtaaaagggtagtgcgtaggaaaggaagacaattatagc-aa 114  Q
    ||||||||||||||   | || ||| ||||| |||  |||||||||||||||| ||||||||||  |||| ||||||||||||| || ||  ||| | ||    
T  17883552 ataaataaagagtcggagatgcagagagtaatatttaaataagtgggggagggaagaagtaaaattgtagcgcgtaggaaaggaggaaaaccataacgaa 17883453  T
Q  115 tggtgagcccaaatataaataggaatattagggattagaaatcagtttttctaaccagagaaaagggagaagaaaagcagacggagagaagcggaaccct 214  Q
    |  |||| |||  | |||||  |||| ||||||||||||||||||||||  | | | | | |||| ||||||| ||||||| |||||||| |||||||||    
T  17883452 tattgagaccatgtttaaatgagaatgttagggattagaaatcagttttgttgatccggggaaagagagaagagaagcagaaggagagaaacggaaccct 17883353  T
Q  215 agtgcagcaacatcgagccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctaggg 289  Q
    ||||||   | | |||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||| |||||    
T  17883352 agtgcattga-accgagccaaaccgaaggtttctatggattcgaggtaa-ggggagaatctattcatctataggg 17883280  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 22554044 - 22553981
Alignment:
Q  230 agccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggttta 293  Q
    ||||||||| ||| |||| ||| ||| |||||||||||| |||||| |||||||||||||||||    
T  22554044 agccaaaccaaagatttcgacgaatttgaggtaagggggagaatctattcatctctagggttta 22553981  T

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Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 26859181 - 26859227
Alignment:
Q  253 attcgaggtaagggggtgaatctcttcatctctagggtttaatattt 299  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||    
T  26859181 attcgaggtaagggggagaatctcttcatctctagggcttattattt 26859227  T

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Target: scaffold0218 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 16624 - 16534
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    |||||||||||||| |||||||||||||||||||||||||||||| | ||| | | ||||||||||||  |||| ||||||||||||||||    
T  16624 tcgaggtaagggggagaatctcttcatctctagggtttaatatttttctgtagggttgtaaaggggttagagtatgagtgttgttatgatg 16534  T

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Target: scaffold0091 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 31276 - 31186
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaata-tttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    |||||||||||||| |||||||||||||||||||||||| || ||||||| ||| | ||||||||||||| |||| ||||||||||||||||    
T  31276 tcgaggtaagggggagaatctcttcatctctagggtttattattttgtttttgg-gttgtaaaggggttggagtatgagtgttgttatgatg 31186  T

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Target: scaffold0063 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 26065 - 26155
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    |||||||||||||| |||||||||||||||||||||||| |||||   | | | | ||||||||||||| |||| ||||||||||||||||    
T  26065 tcgaggtaagggggagaatctcttcatctctagggtttattattttgctatagggttgtaaaggggttggagtatgagtgttgttatgatg 26155  T

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Target: scaffold0061 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 345
Target Start/End: Original strand, 16665 - 16750
Alignment:
Q  260 gtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    ||||||||| |||||||||||||||||||||||| |||||   ||| | | ||||||||||||| |||| ||||||||||||||||    
T  16665 gtaagggggagaatctcttcatctctagggtttattattttgctgtagggttgtaaaggggttggagtatgagtgttgttatgatg 16750  T

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Target: scaffold0061; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 345
Target Start/End: Original strand, 25723 - 25808
Alignment:
Q  260 gtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    ||||||||| |||||||||||||||||||||||| |||||   ||| | | ||||||||||||| |||| ||||||||||||||||    
T  25723 gtaagggggagaatctcttcatctctagggtttattattttgctgtagggttgtaaaggggttggagtatgagtgttgttatgatg 25808  T

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Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 132810 - 132720
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||  |||| | | ||||||||||||| | || |||| |||||||||||    
T  132810 tcgaggtaagggggagaatctcttcatttctagggtttattattttgttgtagggttgtaaaggggttggaatatgagttttgttatgatg 132720  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 51624858 - 51624947
Alignment:
Q  255 tcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaaggggttgtagtaggagtgttgttatgatg 345  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||   ||| | | ||||||||||||  |||| ||||||||||||||||    
T  51624858 tcgaggtaaggggg-gaatctcttcatctctaaggtttaatattttgctgtagggttgtaaaggggttagagtatgagtgttgttatgatg 51624947  T

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Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 71376 - 71331
Alignment:
Q  253 attcgaggtaagggggtgaatctcttcatctctagggtttaatatt 298  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||    
T  71376 attcgaggtaagggggagaatctcttcatctcttgggtttactatt 71331  T

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Target: scaffold0601 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 317
Target Start/End: Original strand, 4104 - 4191
Alignment:
Q  230 agccaaaccgaaggtttctacggattcgaggtaagggggtgaatctcttcatctctagggtttaatatttgtttgtggcgatgtaaag 317  Q
    |||||||||| || |||  ||| |||||||||||||| | |||||||||||||  ||||||||| |||||  |||||| | |||||||    
T  4104 agccaaaccggagattttgacgaattcgaggtaagggagagaatctcttcatccttagggtttattattttattgtggggctgtaaag 4191  T

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