View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16067_high_12 (Length: 342)

Name: NF16067_high_12
Description: NF16067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16067_high_12
NF16067_high_12
[»] chr5 (73 HSPs)
chr5 (14-282)||(37599267-37599535)
chr5 (14-272)||(20780631-20780888)
chr5 (14-272)||(24930841-24931097)
chr5 (14-272)||(20771856-20772113)
chr5 (14-282)||(22336042-22336303)
chr5 (14-277)||(22466666-22466922)
chr5 (14-282)||(22339580-22339841)
chr5 (14-282)||(22749688-22749950)
chr5 (14-272)||(19235792-19236043)
chr5 (14-277)||(22460042-22460298)
chr5 (14-268)||(20819080-20819326)
chr5 (14-268)||(20826180-20826426)
chr5 (14-268)||(28897012-28897290)
chr5 (22-268)||(28890316-28890586)
chr5 (14-278)||(34828967-34829224)
chr5 (62-282)||(38145773-38145994)
chr5 (14-277)||(28371406-28371662)
chr5 (62-282)||(42960017-42960238)
chr5 (105-268)||(28910326-28910490)
chr5 (105-268)||(28925594-28925758)
chr5 (105-268)||(28933521-28933685)
chr5 (105-268)||(28946721-28946885)
chr5 (105-268)||(28932018-28932181)
chr5 (70-282)||(23112767-23112979)
chr5 (203-282)||(9775402-9775481)
chr5 (203-282)||(37805478-37805557)
chr5 (14-103)||(28910260-28910349)
chr5 (14-103)||(28933455-28933544)
chr5 (14-103)||(28946655-28946744)
chr5 (14-98)||(28931952-28932036)
chr5 (158-282)||(41878105-41878228)
chr5 (135-270)||(19801966-19802097)
chr5 (38-103)||(28925552-28925617)
chr5 (158-270)||(23081839-23081951)
chr5 (158-270)||(23076391-23076503)
chr5 (158-270)||(26650350-26650460)
chr5 (158-270)||(26921935-26922045)
chr5 (158-270)||(39608973-39609084)
chr5 (135-267)||(19362548-19362676)
chr5 (158-272)||(37565983-37566096)
chr5 (158-270)||(5341819-5341930)
chr5 (158-270)||(23544961-23545073)
chr5 (158-270)||(24057547-24057658)
chr5 (158-270)||(25419767-25419879)
chr5 (158-255)||(18409149-18409248)
chr5 (158-270)||(20990250-20990359)
chr5 (158-270)||(16775143-16775253)
chr5 (200-268)||(19510948-19511016)
chr5 (158-270)||(28259974-28260084)
chr5 (158-269)||(18941314-18941423)
chr5 (63-217)||(22007944-22008102)
chr5 (203-269)||(22379474-22379540)
chr5 (216-268)||(21494878-21494931)
chr5 (217-268)||(24617894-24617946)
chr5 (217-268)||(24714125-24714177)
chr5 (217-268)||(24747153-24747205)
chr5 (14-49)||(18408981-18409016)
chr5 (14-49)||(21829665-21829700)
chr5 (158-239)||(24751647-24751729)
chr5 (158-270)||(7773749-7773858)
chr5 (201-242)||(22439886-22439927)
chr5 (14-49)||(6404477-6404512)
chr5 (14-49)||(24668972-24669007)
chr5 (14-49)||(24738741-24738776)
chr5 (14-49)||(24751510-24751545)
chr5 (203-252)||(427182-427229)
chr5 (201-239)||(24669153-24669191)
chr5 (201-239)||(24738922-24738960)
chr5 (158-239)||(19800442-19800522)
chr5 (14-46)||(427384-427416)
chr5 (213-268)||(10035058-10035113)
chr5 (14-46)||(20843310-20843342)
chr5 (14-46)||(23561589-23561621)
[»] scaffold0053 (3 HSPs)
scaffold0053 (14-277)||(80406-80670)
scaffold0053 (213-253)||(61297-61336)
scaffold0053 (213-253)||(73085-73124)
[»] chr4 (51 HSPs)
chr4 (14-277)||(16147746-16148010)
chr4 (14-282)||(14910520-14910780)
chr4 (203-282)||(15533721-15533800)
chr4 (203-282)||(36037448-36037527)
chr4 (69-217)||(40908583-40908733)
chr4 (70-217)||(27905211-27905359)
chr4 (14-217)||(1651039-1651236)
chr4 (158-272)||(20889270-20889383)
chr4 (158-268)||(10977137-10977251)
chr4 (158-270)||(46044944-46045056)
chr4 (158-269)||(42220330-42220440)
chr4 (14-257)||(14485470-14485705)
chr4 (203-268)||(14821304-14821370)
chr4 (158-272)||(20894889-20895002)
chr4 (158-272)||(49548658-49548771)
chr4 (203-272)||(31664955-31665024)
chr4 (158-270)||(19128417-19128528)
chr4 (158-270)||(41404780-41404892)
chr4 (75-268)||(14556114-14556308)
chr4 (158-269)||(33096992-33097102)
chr4 (203-268)||(13886614-13886680)
chr4 (203-257)||(15306961-15307015)
chr4 (159-272)||(33221266-33221377)
chr4 (158-270)||(2972807-2972917)
chr4 (69-174)||(14048121-14048227)
chr4 (75-267)||(14062866-14063053)
chr4 (158-270)||(21881490-21881600)
chr4 (14-174)||(14048244-14048396)
chr4 (135-257)||(15406872-15406993)
chr4 (200-245)||(11847025-11847070)
chr4 (63-177)||(16152526-16152642)
chr4 (201-239)||(13452204-13452242)
chr4 (203-268)||(15244047-15244113)
chr4 (217-266)||(22726056-22726106)
chr4 (63-177)||(16156672-16156788)
chr4 (201-242)||(18212114-18212154)
chr4 (158-270)||(899492-899602)
chr4 (14-46)||(12932005-12932037)
chr4 (14-46)||(15360804-15360836)
chr4 (14-46)||(17176528-17176560)
chr4 (135-217)||(26077807-26077890)
chr4 (14-49)||(30146927-30146962)
chr4 (203-270)||(30396096-30396162)
chr4 (183-239)||(37881374-37881431)
chr4 (158-239)||(42956097-42956177)
chr4 (158-239)||(45959817-45959897)
chr4 (158-239)||(47872497-47872577)
chr4 (13-46)||(53905295-53905328)
chr4 (158-239)||(54845023-54845103)
chr4 (14-46)||(18166267-18166299)
chr4 (14-46)||(40908747-40908779)
[»] chr6 (58 HSPs)
chr6 (14-272)||(29096751-29097007)
chr6 (14-272)||(9099984-9100240)
chr6 (14-282)||(4476300-4476561)
chr6 (14-277)||(20008860-20009117)
chr6 (14-272)||(21365448-21365699)
chr6 (14-272)||(23969430-23969681)
chr6 (111-272)||(25634093-25634255)
chr6 (62-270)||(15457412-15457621)
chr6 (62-270)||(15464007-15464216)
chr6 (14-242)||(31251344-31251565)
chr6 (154-272)||(31250237-31250355)
chr6 (181-277)||(20011080-20011176)
chr6 (62-217)||(19300690-19300846)
chr6 (200-282)||(28290367-28290449)
chr6 (203-282)||(12941735-12941814)
chr6 (200-282)||(25347017-25347099)
chr6 (62-217)||(14581877-14582034)
chr6 (135-270)||(23021425-23021556)
chr6 (158-270)||(12447291-12447403)
chr6 (75-217)||(14995984-14996128)
chr6 (158-272)||(17894617-17894730)
chr6 (158-272)||(10464305-10464417)
chr6 (158-272)||(10470827-10470939)
chr6 (158-270)||(17207833-17207944)
chr6 (158-270)||(27767306-27767417)
chr6 (75-268)||(8768208-8768390)
chr6 (201-268)||(18786010-18786078)
chr6 (213-268)||(25749655-25749711)
chr6 (135-268)||(8760522-8760653)
chr6 (203-268)||(19472490-19472556)
chr6 (203-268)||(25395948-25396014)
chr6 (197-270)||(13940380-13940453)
chr6 (158-270)||(29925643-29925753)
chr6 (14-49)||(17414157-17414192)
chr6 (14-49)||(19467984-19468019)
chr6 (14-243)||(24513809-24514030)
chr6 (158-239)||(94586-94666)
chr6 (200-237)||(12167217-12167254)
chr6 (201-242)||(18799360-18799401)
chr6 (200-237)||(19286126-19286163)
chr6 (200-237)||(19787033-19787070)
chr6 (200-237)||(19877310-19877347)
chr6 (200-237)||(19883086-19883123)
chr6 (14-46)||(10582820-10582852)
chr6 (14-46)||(19472305-19472337)
chr6 (14-46)||(24720763-24720795)
chr6 (14-46)||(25396168-25396200)
chr6 (14-49)||(5290122-5290157)
chr6 (14-49)||(14616253-14616288)
chr6 (14-49)||(14724525-14724560)
chr6 (14-49)||(19451446-19451481)
chr6 (200-239)||(24562260-24562299)
chr6 (201-239)||(5290303-5290341)
chr6 (200-242)||(11284005-11284047)
chr6 (201-259)||(21566348-21566405)
chr6 (200-242)||(25470851-25470893)
chr6 (12-49)||(8760408-8760444)
chr6 (201-242)||(18788380-18788421)
[»] chr3 (81 HSPs)
chr3 (14-272)||(19235981-19236237)
chr3 (14-282)||(14764111-14764372)
chr3 (14-282)||(23371857-23372118)
chr3 (14-282)||(51300037-51300298)
chr3 (14-277)||(14864728-14864984)
chr3 (14-277)||(17130637-17130892)
chr3 (14-277)||(12034328-12034584)
chr3 (14-277)||(20249117-20249373)
chr3 (14-268)||(10390378-10390625)
chr3 (14-268)||(10415487-10415734)
chr3 (14-268)||(10422157-10422404)
chr3 (75-268)||(10553822-10554016)
chr3 (13-282)||(38312129-38312392)
chr3 (203-282)||(3802472-3802551)
chr3 (158-282)||(29545271-29545394)
chr3 (206-282)||(12304684-12304760)
chr3 (14-217)||(19443469-19443666)
chr3 (63-268)||(18888914-18889122)
chr3 (14-242)||(18899980-18900201)
chr3 (200-282)||(9532784-9532866)
chr3 (158-268)||(30596967-30597076)
chr3 (158-272)||(54519987-54520100)
chr3 (14-178)||(13313919-13314076)
chr3 (158-270)||(8374033-8374144)
chr3 (73-257)||(18913966-18914151)
chr3 (135-239)||(31690691-31690796)
chr3 (135-257)||(17243775-17243897)
chr3 (158-270)||(16833165-16833275)
chr3 (203-270)||(15374627-15374694)
chr3 (202-257)||(23174119-23174174)
chr3 (62-178)||(13303282-13303400)
chr3 (158-268)||(29550869-29550977)
chr3 (69-217)||(18719161-18719312)
chr3 (213-268)||(14289150-14289206)
chr3 (158-270)||(32388125-32388236)
chr3 (158-270)||(49163098-49163208)
chr3 (135-178)||(13324945-13324988)
chr3 (203-270)||(27029588-27029654)
chr3 (203-270)||(27031756-27031822)
chr3 (203-270)||(54091845-54091911)
chr3 (203-265)||(18957715-18957777)
chr3 (158-270)||(9691516-9691626)
chr3 (188-239)||(10597881-10597933)
chr3 (158-270)||(11956704-11956814)
chr3 (213-268)||(42109062-42109118)
chr3 (158-270)||(46071219-46071329)
chr3 (14-49)||(12355952-12355987)
chr3 (14-49)||(12362501-12362536)
chr3 (203-242)||(17190811-17190850)
chr3 (14-49)||(17496282-17496317)
chr3 (135-248)||(34852304-34852414)
chr3 (135-265)||(14292657-14292786)
chr3 (204-242)||(17157036-17157074)
chr3 (204-242)||(24191737-24191775)
chr3 (216-257)||(13342671-13342712)
chr3 (158-270)||(16331702-16331811)
chr3 (201-242)||(16802610-16802651)
chr3 (158-239)||(48774727-48774807)
chr3 (14-50)||(2270240-2270276)
chr3 (14-46)||(11644798-11644830)
chr3 (158-237)||(11850780-11850860)
chr3 (135-217)||(12255133-12255216)
chr3 (14-46)||(13692087-13692119)
chr3 (217-257)||(17512490-17512530)
chr3 (217-257)||(46723597-46723637)
chr3 (200-239)||(8583454-8583493)
chr3 (14-49)||(12479687-12479722)
chr3 (200-239)||(14084509-14084548)
chr3 (200-239)||(14089910-14089949)
chr3 (135-217)||(14544286-14544368)
chr3 (14-49)||(15518656-15518691)
chr3 (14-45)||(18136298-18136329)
chr3 (158-269)||(19344261-19344370)
chr3 (203-270)||(20377393-20377459)
chr3 (200-239)||(49399451-49399490)
chr3 (200-242)||(41456308-41456350)
chr3 (14-46)||(12202446-12202478)
chr3 (200-236)||(13968993-13969029)
chr3 (200-236)||(13974468-13974504)
chr3 (203-239)||(20187671-20187707)
chr3 (213-268)||(24284634-24284689)
[»] chr7 (78 HSPs)
chr7 (14-277)||(29182024-29182288)
chr7 (14-277)||(16089961-16090225)
chr7 (14-282)||(18871801-18872062)
chr7 (14-277)||(10897165-10897420)
chr7 (14-282)||(15166709-15166971)
chr7 (14-277)||(2965871-2966127)
chr7 (14-277)||(20907341-20907597)
chr7 (14-277)||(16008024-16008280)
chr7 (14-272)||(2464258-2464508)
chr7 (14-271)||(3858337-3858586)
chr7 (14-282)||(147002-147264)
chr7 (14-277)||(14320546-14320802)
chr7 (14-282)||(14565643-14565904)
chr7 (62-270)||(31154314-31154523)
chr7 (203-282)||(23665990-23666069)
chr7 (203-282)||(29795665-29795744)
chr7 (203-282)||(29799484-29799563)
chr7 (135-282)||(11302787-11302933)
chr7 (200-282)||(14421289-14421371)
chr7 (202-268)||(14266165-14266232)
chr7 (202-268)||(19145514-19145581)
chr7 (202-268)||(20744913-20744980)
chr7 (158-268)||(13678230-13678343)
chr7 (158-270)||(13019655-13019766)
chr7 (202-268)||(14255889-14255956)
chr7 (135-255)||(21232129-21232248)
chr7 (158-270)||(19439259-19439370)
chr7 (204-268)||(46624790-46624855)
chr7 (135-257)||(20328344-20328465)
chr7 (202-245)||(11384000-11384043)
chr7 (202-245)||(11390488-11390531)
chr7 (158-269)||(16843984-16844093)
chr7 (202-268)||(18606814-18606881)
chr7 (202-268)||(19151816-19151883)
chr7 (202-268)||(20751215-20751282)
chr7 (63-217)||(11220134-11220290)
chr7 (135-239)||(37244403-37244506)
chr7 (14-49)||(46348731-46348766)
chr7 (201-239)||(3327778-3327816)
chr7 (201-239)||(32771473-32771511)
chr7 (200-237)||(13006286-13006323)
chr7 (216-268)||(16575613-16575666)
chr7 (216-268)||(16589996-16590049)
chr7 (201-242)||(16676167-16676208)
chr7 (201-242)||(17650404-17650445)
chr7 (76-217)||(6411821-6411963)
chr7 (14-46)||(11857681-11857713)
chr7 (14-46)||(14178986-14179018)
chr7 (14-46)||(15104319-15104351)
chr7 (158-270)||(23520950-23521060)
chr7 (135-237)||(36306130-36306233)
chr7 (14-46)||(46625014-46625046)
chr7 (14-46)||(46682169-46682201)
chr7 (14-49)||(832963-832998)
chr7 (14-49)||(837006-837041)
chr7 (14-49)||(1198143-1198178)
chr7 (14-49)||(1202186-1202221)
chr7 (14-49)||(1612782-1612817)
chr7 (14-49)||(3289762-3289797)
chr7 (14-49)||(3327963-3327998)
chr7 (200-239)||(4279941-4279980)
chr7 (158-269)||(12461467-12461576)
chr7 (14-49)||(16187705-16187740)
chr7 (200-239)||(19616273-19616312)
chr7 (200-242)||(12711060-12711102)
chr7 (200-242)||(13124131-13124173)
chr7 (200-237)||(12591795-12591832)
chr7 (183-239)||(18958570-18958627)
chr7 (216-268)||(23442201-23442254)
chr7 (158-239)||(46174303-46174383)
chr7 (14-46)||(10520003-10520035)
chr7 (217-268)||(11308933-11308985)
chr7 (217-268)||(11312241-11312293)
chr7 (14-46)||(12547339-12547371)
chr7 (135-217)||(14945937-14946020)
chr7 (14-46)||(15097942-15097974)
chr7 (135-217)||(15373530-15373613)
chr7 (206-270)||(30271898-30271961)
[»] scaffold0544 (1 HSPs)
scaffold0544 (14-282)||(2830-3091)
[»] scaffold0026 (4 HSPs)
scaffold0026 (14-282)||(110128-110389)
scaffold0026 (75-268)||(124505-124697)
scaffold0026 (200-242)||(13037-13079)
scaffold0026 (202-244)||(142605-142646)
[»] chr2 (52 HSPs)
chr2 (14-282)||(19662805-19663066)
chr2 (14-277)||(29280881-29281137)
chr2 (14-278)||(9461-9718)
chr2 (14-277)||(27210960-27211216)
chr2 (14-278)||(26884092-26884348)
chr2 (62-277)||(6261567-6261783)
chr2 (14-177)||(25181813-25181969)
chr2 (200-282)||(9241268-9241350)
chr2 (203-282)||(10685787-10685866)
chr2 (203-282)||(20260759-20260838)
chr2 (14-268)||(21907196-21907444)
chr2 (14-179)||(27208625-27208783)
chr2 (158-268)||(15643368-15643477)
chr2 (14-268)||(23263931-23264177)
chr2 (75-239)||(19649576-19649743)
chr2 (135-268)||(21074075-21074209)
chr2 (158-270)||(32911561-32911673)
chr2 (202-268)||(21124038-21124105)
chr2 (200-268)||(6482270-6482338)
chr2 (158-270)||(13101253-13101364)
chr2 (154-268)||(23269147-23269263)
chr2 (154-268)||(23276016-23276132)
chr2 (158-270)||(45028456-45028568)
chr2 (135-256)||(23062462-23062582)
chr2 (200-268)||(6485737-6485805)
chr2 (201-268)||(23877786-23877854)
chr2 (203-268)||(24660405-24660470)
chr2 (158-270)||(25590280-25590390)
chr2 (158-270)||(27272200-27272310)
chr2 (14-49)||(22796608-22796643)
chr2 (14-49)||(23062711-23062746)
chr2 (216-257)||(17633782-17633823)
chr2 (76-217)||(22809882-22810024)
chr2 (13-46)||(22860468-22860501)
chr2 (201-242)||(23090191-23090232)
chr2 (201-242)||(23102619-23102660)
chr2 (200-241)||(23169458-23169499)
chr2 (200-241)||(23580715-23580756)
chr2 (14-46)||(8889947-8889979)
chr2 (14-46)||(20648238-20648270)
chr2 (135-217)||(20724032-20724115)
chr2 (14-46)||(24660629-24660661)
chr2 (14-46)||(25107449-25107481)
chr2 (14-46)||(25267368-25267400)
chr2 (200-239)||(200619-200658)
chr2 (203-270)||(17592658-17592724)
chr2 (135-239)||(21133350-21133453)
chr2 (199-242)||(26582650-26582693)
chr2 (203-270)||(36800506-36800572)
chr2 (200-239)||(43693379-43693418)
chr2 (201-239)||(28971440-28971478)
chr2 (158-239)||(11466051-11466130)
[»] chr8 (45 HSPs)
chr8 (14-282)||(8728992-8729254)
chr8 (14-277)||(24321583-24321839)
chr8 (14-272)||(8596072-8596322)
chr8 (105-282)||(27942237-27942415)
chr8 (135-268)||(23653084-23653216)
chr8 (135-257)||(14057703-14057823)
chr8 (13-268)||(18609741-18609988)
chr8 (158-270)||(14416645-14416756)
chr8 (158-268)||(23653787-23653900)
chr8 (213-268)||(21930562-21930618)
chr8 (200-268)||(44476185-44476253)
chr8 (200-268)||(44479447-44479515)
chr8 (203-270)||(11392721-11392788)
chr8 (135-217)||(22025679-22025762)
chr8 (203-270)||(27873746-27873812)
chr8 (203-270)||(27889876-27889942)
chr8 (203-270)||(27948534-27948600)
chr8 (203-270)||(29299192-29299258)
chr8 (203-270)||(29305738-29305804)
chr8 (133-217)||(20974116-20974201)
chr8 (203-272)||(25701683-25701752)
chr8 (135-217)||(21322355-21322439)
chr8 (201-257)||(25110830-25110886)
chr8 (14-49)||(10607093-10607128)
chr8 (14-49)||(21300125-21300160)
chr8 (200-239)||(23825102-23825141)
chr8 (135-239)||(31412607-31412710)
chr8 (135-239)||(31418789-31418892)
chr8 (218-268)||(39363422-39363473)
chr8 (203-270)||(43687348-43687414)
chr8 (199-257)||(25409514-25409572)
chr8 (200-237)||(17053577-17053614)
chr8 (14-46)||(19859674-19859706)
chr8 (135-217)||(21326943-21327027)
chr8 (14-46)||(21683670-21683702)
chr8 (14-46)||(21688019-21688051)
chr8 (14-46)||(21690412-21690444)
chr8 (14-46)||(36445731-36445763)
chr8 (200-242)||(19903088-19903130)
chr8 (200-242)||(23865409-23865451)
chr8 (158-272)||(29328142-29328254)
chr8 (135-176)||(22063682-22063723)
chr8 (14-46)||(20783852-20783884)
chr8 (14-46)||(23654005-23654037)
chr8 (200-236)||(30767109-30767145)
[»] chr1 (41 HSPs)
chr1 (14-277)||(21705162-21705418)
chr1 (14-277)||(20852046-20852302)
chr1 (14-277)||(20858672-20858928)
chr1 (14-277)||(16371477-16371733)
chr1 (105-268)||(16669336-16669500)
chr1 (14-179)||(21709801-21709959)
chr1 (14-217)||(19961135-19961330)
chr1 (135-257)||(19664225-19664346)
chr1 (158-270)||(43088338-43088450)
chr1 (202-268)||(21987128-21987195)
chr1 (200-282)||(20438692-20438773)
chr1 (135-270)||(36614882-36615013)
chr1 (158-270)||(47484054-47484165)
chr1 (158-270)||(49327980-49328091)
chr1 (51-103)||(16669307-16669359)
chr1 (158-239)||(9269910-9269990)
chr1 (213-257)||(5380654-5380698)
chr1 (158-270)||(29596914-29597024)
chr1 (14-49)||(19666713-19666748)
chr1 (14-49)||(21664323-21664358)
chr1 (14-48)||(21732637-21732671)
chr1 (201-239)||(23195637-23195675)
chr1 (216-257)||(7792987-7793028)
chr1 (135-240)||(11156938-11157042)
chr1 (216-257)||(21734641-21734682)
chr1 (14-46)||(15316486-15316518)
chr1 (14-46)||(20849192-20849224)
chr1 (14-46)||(21410656-21410688)
chr1 (14-217)||(29554427-29554623)
chr1 (14-49)||(16883522-16883557)
chr1 (14-49)||(19853194-19853229)
chr1 (14-49)||(19859329-19859364)
chr1 (200-239)||(21542034-21542073)
chr1 (203-270)||(21920744-21920810)
chr1 (14-49)||(23195455-23195490)
chr1 (14-49)||(32650261-32650296)
chr1 (216-257)||(21745846-21745887)
chr1 (158-239)||(24850077-24850157)
chr1 (200-237)||(41110794-41110831)
chr1 (158-239)||(42626177-42626257)
chr1 (135-176)||(20824444-20824487)
[»] scaffold1469 (1 HSPs)
scaffold1469 (14-272)||(238-498)
[»] scaffold0343 (1 HSPs)
scaffold0343 (14-278)||(117-374)
[»] scaffold0029 (2 HSPs)
scaffold0029 (14-271)||(92115-92364)
scaffold0029 (14-271)||(97841-98090)
[»] scaffold0099 (1 HSPs)
scaffold0099 (16-272)||(11780-12045)
[»] scaffold0001 (5 HSPs)
scaffold0001 (62-278)||(493978-494195)
scaffold0001 (135-270)||(178950-179081)
scaffold0001 (14-49)||(96008-96043)
scaffold0001 (200-257)||(174722-174779)
scaffold0001 (213-257)||(524603-524647)
[»] scaffold0249 (3 HSPs)
scaffold0249 (14-270)||(14779-15027)
scaffold0249 (73-268)||(7840-8038)
scaffold0249 (214-268)||(6968-7023)
[»] scaffold0131 (1 HSPs)
scaffold0131 (14-186)||(1-166)
[»] scaffold0720 (2 HSPs)
scaffold0720 (137-278)||(4264-4406)
scaffold0720 (14-52)||(4174-4212)
[»] scaffold0124 (4 HSPs)
scaffold0124 (200-282)||(36977-37059)
scaffold0124 (201-268)||(44179-44247)
scaffold0124 (14-46)||(45061-45093)
scaffold0124 (14-46)||(9391-9423)
[»] scaffold0085 (2 HSPs)
scaffold0085 (14-131)||(4584-4693)
scaffold0085 (232-277)||(1-46)
[»] scaffold0034 (6 HSPs)
scaffold0034 (70-217)||(72229-72377)
scaffold0034 (183-242)||(35867-35927)
scaffold0034 (139-239)||(10205-10306)
scaffold0034 (135-239)||(17497-17602)
scaffold0034 (14-48)||(412-446)
scaffold0034 (14-48)||(6571-6605)
[»] scaffold0609 (1 HSPs)
scaffold0609 (192-272)||(1-81)
[»] scaffold0261 (1 HSPs)
scaffold0261 (14-217)||(24484-24680)
[»] scaffold0395 (1 HSPs)
scaffold0395 (135-268)||(4222-4354)
[»] scaffold1427 (2 HSPs)
scaffold1427 (70-178)||(877-986)
scaffold1427 (158-272)||(569-682)
[»] scaffold0004 (3 HSPs)
scaffold0004 (135-270)||(115682-115817)
scaffold0004 (203-268)||(129858-129924)
scaffold0004 (14-46)||(129672-129704)
[»] scaffold0037 (2 HSPs)
scaffold0037 (202-268)||(97503-97570)
scaffold0037 (158-270)||(101764-101874)
[»] scaffold1584 (1 HSPs)
scaffold1584 (75-239)||(298-465)
[»] scaffold0049 (1 HSPs)
scaffold0049 (202-266)||(43059-43124)
[»] scaffold0076 (3 HSPs)
scaffold0076 (158-270)||(8-120)
scaffold0076 (200-239)||(30305-30344)
scaffold0076 (200-239)||(35706-35745)
[»] scaffold0020 (1 HSPs)
scaffold0020 (135-268)||(103024-103157)
[»] scaffold0019 (1 HSPs)
scaffold0019 (158-270)||(143909-144020)
[»] scaffold0107 (1 HSPs)
scaffold0107 (135-257)||(41712-41833)
[»] scaffold0352 (1 HSPs)
scaffold0352 (203-268)||(4478-4544)
[»] scaffold0089 (2 HSPs)
scaffold0089 (135-268)||(1843-1976)
scaffold0089 (14-49)||(2105-2140)
[»] scaffold0005 (1 HSPs)
scaffold0005 (203-268)||(18339-18405)
[»] scaffold0693 (1 HSPs)
scaffold0693 (154-268)||(1986-2103)
[»] scaffold0461 (4 HSPs)
scaffold0461 (154-268)||(1193-1310)
scaffold0461 (154-268)||(8129-8246)
scaffold0461 (14-122)||(1037-1136)
scaffold0461 (14-122)||(7973-8072)
[»] scaffold0317 (1 HSPs)
scaffold0317 (158-268)||(123-236)
[»] scaffold0220 (1 HSPs)
scaffold0220 (132-268)||(10292-10426)
[»] scaffold0453 (1 HSPs)
scaffold0453 (14-97)||(11465-11540)
[»] scaffold0232 (1 HSPs)
scaffold0232 (203-268)||(19565-19631)
[»] scaffold0222 (2 HSPs)
scaffold0222 (203-268)||(27942-28008)
scaffold0222 (135-217)||(5102-5184)
[»] scaffold0098 (1 HSPs)
scaffold0098 (135-239)||(52731-52836)
[»] scaffold0154 (1 HSPs)
scaffold0154 (135-242)||(29723-29829)
[»] scaffold0139 (2 HSPs)
scaffold0139 (201-242)||(16207-16248)
scaffold0139 (14-49)||(15979-16014)
[»] scaffold0554 (1 HSPs)
scaffold0554 (201-268)||(108-176)
[»] scaffold0310 (2 HSPs)
scaffold0310 (158-270)||(7661-7771)
scaffold0310 (203-270)||(12852-12918)
[»] scaffold0235 (1 HSPs)
scaffold0235 (201-253)||(17099-17151)
[»] scaffold0178 (1 HSPs)
scaffold0178 (213-268)||(25447-25503)
[»] scaffold0060 (1 HSPs)
scaffold0060 (158-270)||(41179-41289)
[»] scaffold0031 (1 HSPs)
scaffold0031 (158-270)||(74231-74342)
[»] scaffold0574 (1 HSPs)
scaffold0574 (14-268)||(5885-6128)
[»] scaffold0483 (1 HSPs)
scaffold0483 (14-153)||(11924-12055)
[»] scaffold0094 (2 HSPs)
scaffold0094 (203-268)||(51079-51145)
scaffold0094 (14-46)||(51299-51331)
[»] scaffold0068 (1 HSPs)
scaffold0068 (158-272)||(65404-65517)
[»] scaffold0008 (1 HSPs)
scaffold0008 (14-177)||(34817-34973)
[»] scaffold1615 (1 HSPs)
scaffold1615 (133-253)||(510-629)
[»] scaffold0634 (1 HSPs)
scaffold0634 (200-245)||(2538-2583)
[»] scaffold0337 (1 HSPs)
scaffold0337 (201-268)||(10419-10486)
[»] scaffold0301 (2 HSPs)
scaffold0301 (135-217)||(13510-13593)
scaffold0301 (14-46)||(3373-3405)
[»] scaffold0169 (1 HSPs)
scaffold0169 (213-268)||(5873-5929)
[»] scaffold0610 (1 HSPs)
scaffold0610 (14-49)||(5707-5742)
[»] scaffold0348 (1 HSPs)
scaffold0348 (14-49)||(8465-8500)
[»] scaffold0192 (1 HSPs)
scaffold0192 (14-49)||(6801-6836)
[»] scaffold0061 (1 HSPs)
scaffold0061 (14-49)||(57165-57200)
[»] scaffold0058 (1 HSPs)
scaffold0058 (135-217)||(17477-17559)
[»] scaffold0017 (1 HSPs)
scaffold0017 (14-49)||(141433-141468)
[»] scaffold0011 (7 HSPs)
scaffold0011 (14-49)||(154291-154326)
scaffold0011 (14-49)||(252047-252082)
scaffold0011 (14-49)||(147170-147205)
scaffold0011 (200-239)||(174721-174760)
scaffold0011 (14-49)||(197421-197456)
scaffold0011 (14-46)||(56746-56778)
scaffold0011 (14-46)||(75298-75330)
[»] scaffold0009 (2 HSPs)
scaffold0009 (158-269)||(246968-247078)
scaffold0009 (158-269)||(253482-253592)
[»] scaffold1061 (2 HSPs)
scaffold1061 (203-268)||(1234-1299)
scaffold1061 (14-46)||(1453-1485)
[»] scaffold0113 (1 HSPs)
scaffold0113 (203-272)||(19115-19184)
[»] scaffold0104 (3 HSPs)
scaffold0104 (201-239)||(26069-26107)
scaffold0104 (201-239)||(27451-27489)
scaffold0104 (213-268)||(41808-41864)
[»] scaffold0575 (1 HSPs)
scaffold0575 (213-268)||(172-229)
[»] scaffold0462 (1 HSPs)
scaffold0462 (213-265)||(9473-9526)
[»] scaffold0420 (1 HSPs)
scaffold0420 (135-226)||(9993-10085)
[»] scaffold0363 (1 HSPs)
scaffold0363 (158-270)||(1963-2072)
[»] scaffold0206 (1 HSPs)
scaffold0206 (192-237)||(13251-13296)
[»] scaffold0126 (1 HSPs)
scaffold0126 (68-174)||(44245-44342)
[»] scaffold0077 (1 HSPs)
scaffold0077 (201-242)||(4779-4820)
[»] scaffold2016 (1 HSPs)
scaffold2016 (213-268)||(932-988)
[»] scaffold1299 (1 HSPs)
scaffold1299 (202-242)||(329-369)
[»] scaffold0751 (2 HSPs)
scaffold0751 (14-46)||(567-599)
scaffold0751 (203-252)||(366-413)
[»] scaffold0342 (1 HSPs)
scaffold0342 (14-217)||(16874-17071)
[»] scaffold0334 (1 HSPs)
scaffold0334 (14-46)||(8640-8672)
[»] scaffold0331 (1 HSPs)
scaffold0331 (14-46)||(18668-18700)
[»] scaffold0309 (1 HSPs)
scaffold0309 (133-177)||(20845-20889)
[»] scaffold0298 (2 HSPs)
scaffold0298 (14-46)||(8403-8435)
scaffold0298 (14-46)||(18487-18519)
[»] scaffold0205 (1 HSPs)
scaffold0205 (14-46)||(27405-27437)
[»] scaffold0156 (1 HSPs)
scaffold0156 (14-46)||(25750-25782)
[»] scaffold0120 (1 HSPs)
scaffold0120 (14-46)||(5107-5139)
[»] scaffold0114 (1 HSPs)
scaffold0114 (14-46)||(47802-47834)
[»] scaffold0097 (1 HSPs)
scaffold0097 (135-217)||(27861-27944)
[»] scaffold0096 (1 HSPs)
scaffold0096 (14-46)||(3036-3068)
[»] scaffold0065 (1 HSPs)
scaffold0065 (76-217)||(27803-27945)
[»] scaffold0035 (1 HSPs)
scaffold0035 (14-46)||(10611-10643)
[»] scaffold0028 (3 HSPs)
scaffold0028 (14-46)||(65133-65165)
scaffold0028 (200-239)||(47139-47178)
scaffold0028 (200-239)||(52544-52583)
[»] scaffold0025 (2 HSPs)
scaffold0025 (14-46)||(76883-76915)
scaffold0025 (204-242)||(15620-15658)
[»] scaffold0706 (1 HSPs)
scaffold0706 (14-49)||(3310-3345)
[»] scaffold0405 (1 HSPs)
scaffold0405 (14-49)||(3279-3314)
[»] scaffold0243 (3 HSPs)
scaffold0243 (14-49)||(16029-16064)
scaffold0243 (14-268)||(8009-8254)
scaffold0243 (14-42)||(12315-12343)
[»] scaffold0106 (4 HSPs)
scaffold0106 (200-239)||(38379-38418)
scaffold0106 (14-49)||(46740-46775)
scaffold0106 (14-49)||(51013-51048)
scaffold0106 (14-46)||(28763-28795)
[»] scaffold0067 (3 HSPs)
scaffold0067 (135-217)||(47507-47589)
scaffold0067 (135-217)||(56541-56623)
scaffold0067 (135-217)||(62927-63009)
[»] scaffold0023 (1 HSPs)
scaffold0023 (135-174)||(156861-156899)
[»] scaffold0022 (2 HSPs)
scaffold0022 (14-49)||(38648-38683)
scaffold0022 (14-49)||(136708-136743)
[»] scaffold0811 (1 HSPs)
scaffold0811 (200-242)||(114-156)
[»] scaffold0117 (1 HSPs)
scaffold0117 (200-242)||(9792-9834)
[»] scaffold0476 (1 HSPs)
scaffold0476 (201-242)||(4460-4501)
[»] scaffold0266 (1 HSPs)
scaffold0266 (158-239)||(15080-15160)
[»] scaffold0790 (1 HSPs)
scaffold0790 (213-257)||(4374-4417)
[»] scaffold0556 (1 HSPs)
scaffold0556 (14-46)||(4988-5020)
[»] scaffold0377 (1 HSPs)
scaffold0377 (135-217)||(7253-7336)
[»] scaffold0167 (1 HSPs)
scaffold0167 (14-50)||(7099-7135)
[»] scaffold0121 (1 HSPs)
scaffold0121 (14-46)||(9404-9436)
[»] scaffold0102 (1 HSPs)
scaffold0102 (14-46)||(44748-44780)
[»] scaffold0093 (1 HSPs)
scaffold0093 (228-272)||(24593-24637)
[»] scaffold0078 (1 HSPs)
scaffold0078 (14-46)||(17409-17441)


Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 37599267 - 37599535
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37599267 atatacacaagtggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatggaacactatg 37599366  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  37599367 ttgttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaatcattctataaagatgagggcttcgactctgttatggtaccacat 37599466  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37599467 gcatagttgcatttgttgagaagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 37599535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 20780888 - 20780631
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||    
T  20780888 atatacacaagtggagtcagttgcataagcataaaaatgatgttatgatgcggactttggtcctggaacgctttgtcgttcaaaatgatggaatactatg 20780789  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20780788 t-gttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctttgttatggtaccacat 20780690  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  20780689 gcatagttgcatttgttcagaagtcttagtagagttgtcatgtcttgcatgagtcttag 20780631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 24930841 - 24931097
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  24930841 atatacactagaggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtccaggaacgccttgtcgttcaaaatgatggaacactatg 24930940  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24930941 t-gttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 24931039  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||||| || |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  24931040 gcatagtttca-ttgttgaggagtcttagtagaggtgtcatgtcttgcatgagtcttag 24931097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 20772113 - 20771856
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||    
T  20772113 atatacacaagtggagtcagtcgcataagcataaaaatgatgttatgatgtggactttggtcctggaacgctttgtcgttcaaaatgatggaatactatg 20772014  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  20772013 t-gttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaatatgagagcttcggctttgttatgataccacat 20771915  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  20771914 gcatagttgcatttgttcagaagtcttagtagagttgtcatgtcttgcatgagtcttag 20771856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 22336303 - 22336042
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||||||||||| ||||||||||||| |||| |||||||||    
T  22336303 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacctcggtcctggaacgccttgtcgttcaaaacgatggaacactatg 22336212  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  22336211 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 22336112  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22336111 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 22336042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 22466922 - 22466666
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  22466922 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaatgatggaacactatg 22466831  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  22466830 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccaca 22466731  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  22466730 tgcatagttgcatttgttgatgagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 22466666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 22339841 - 22339580
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||||||||| | ||||||||||||| |||| |||||||||    
T  22339841 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacctcggtcctggaacaccttgtcgttcaaaacgatggaacactatg 22339750  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| |||    
T  22339749 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtacgaca 22339650  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22339649 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 22339580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 22749950 - 22749688
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||| ||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||| ||||||||||||| |||| | |||||||    
T  22749950 atatccacaagtggagtcagttgcataagcataaaaa-------acgatgaggacttcggtcctggaacgccttgtcgttcaaaacgatggagcactatg 22749858  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  22749857 ttgttcaaaacgatgttaacgatgaagactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 22749758  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22749757 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 22749688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 19236043 - 19235792
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  19236043 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaacgatggaacactatg 19235952  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  19235951 ttgttcaaaacgatgttaacgatgatgactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccaca 19235852  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19235851 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttag 19235792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 22460298 - 22460042
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  22460298 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaacgatggaacactatg 22460207  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    || |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  22460206 tttttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacaatgagggcttcggctctgttatggtaccaca 22460107  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  22460106 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 22460042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 20819326 - 20819080
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  20819326 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 20819235  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  20819234 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgaaatggtaccaca 20819135  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||| ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  20819134 tgcataattgcatttgttgaggagtctt-gtagagttgtcatgtcttgcatgagtc 20819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 20826426 - 20826180
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  20826426 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 20826335  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  20826334 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgaaatggtaccaca 20826235  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||| ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  20826234 tgcataattgcatttgttgaggagtctt-gtagagttgtcatgtcttgcatgagtc 20826180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 28897012 - 28897290
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaa--------atgatga- 104  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||        |||||||     
T  28897012 atatacataagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacactttgttgttcaaaccgatgttatgatgag 28897111  T
Q  105 --------------aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctga-taaaagaatgctttaaccattctataaagatgagagc 189  Q
                  |||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||    
T  28897112 gacttcggtcctggaacactttgttgttcaaaacgatgttatgatgaggactcgtgtcctgaataaaagaatgctttaaccattctaataagatgagagc 28897211  T
Q  190 ttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28897212 ttcggctctgttatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtcttgcatgagtc 28897290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 22 - 268
Target Start/End: Original strand, 28890316 - 28890586
Alignment:
Q  22 aagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaa--------atgatga--------- 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||        |||||||             
T  28890316 aagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacactttgttgttcaaaccgatgttatgatgaggacttcgg 28890415  T
Q  105 ------aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctga-taaaagaatgctttaaccattctataaagatgagagcttcggctc 197  Q
          |||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  28890416 tcctggaacactttgttgttcaaaacgatgttatgatgaggactcgtgtcctgaataaaagaatgctttaaccattctaataagatgagagcttcggctc 28890515  T
Q  198 tgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28890516 tgttatggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtcttgcatgagtc 28890586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 34829224 - 34828967
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||| ||||||||||||||||||||| || ||        ||||| ||||||||||||||| ||||||||||||  | || |||||||||    
T  34829224 atatacacaagtgg-gtcagttgcataagcataaaagcggtg--------aggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatg 34829134  T
Q  114 ttgttcaaaacaatgtta-tgatgaggactcatgtcctgataaaa-gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    ||||||||| |  ||||| || ||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||| |||||||| |||||||||||    
T  34829133 ttgttcaaagcggtgttaatggtgaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggctccggctctgatatggtaccac 34829034  T
Q  212 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtgg 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34829033 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtgg 34828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 62 - 282
Target Start/End: Original strand, 38145773 - 38145994
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgataaaa-gaa 160  Q
    ||||||| ||||||||||||||| ||||||||||||  | || |||||||||||||||||| |  |||||    |||||||||||||||||||||| |||    
T  38145773 tgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttaatgggaggactcatgtcctgataaaaagaa 38145872  T
Q  161 tgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 260  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38145873 tgctttaaccattctataacggtgagggcttcggctctgatatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 38145972  T
Q  261 catgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||    
T  38145973 catgagtcttagcggtggtgtc 38145994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 28371406 - 28371662
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||| ||||||||||||||||||        || ||||||| ||||||||||||||| ||||||||||||  | || |||||||||    
T  28371406 atatacacaagtggagtc-gttgcataagcataaaaa--------tggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatg 28371496  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaa--gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    ||||||||| |  |||||    ||||||||||||||||||||||  |||||||||||||||||||||| | |||| |||||||||||| |||||||||||    
T  28371497 ttgttcaaagcggtgttaatgggaggactcatgtcctgataaaaaagaatgctttaaccattctataacggtgagggcttcggctctgatatggtaccac 28371596  T
Q  212 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28371597 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagaggtg 28371662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 62 - 282
Target Start/End: Complemental strand, 42960238 - 42960017
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgataaaa-gaa 160  Q
    ||||||| |||||||||||| || ||||||||||||  | || |||||||||||||||||| |  |||||    |||||||||||||||||||||| |||    
T  42960238 tgaggacctcggtcctggaatgccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttaatgggaggactcatgtcctgataaaaagaa 42960139  T
Q  161 tgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 260  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42960138 tgctttaaccattctataacggtgagggcttcggctctgatatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 42960039  T
Q  261 catgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||    
T  42960038 catgagtcttagcggtggtgtc 42960017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 28910326 - 28910490
Alignment:
Q  105 aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctga-taaaagaatgctttaaccattctataaagatgagagcttcggctctgttat 203  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28910326 aacactttgttgttcaaaacgatgttatgatgaggactcgtgtcctgaataaaagaatgctttaaccattctaataagatgagagcttcggctctgttat 28910425  T
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28910426 ggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtcttgcatgagtc 28910490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 28925594 - 28925758
Alignment:
Q  105 aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctga-taaaagaatgctttaaccattctataaagatgagagcttcggctctgttat 203  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28925594 aacactttgttgttcaaaacgatgttatgatgaggactcgtgtcctgaataaaagaatgctttaaccattctaataagatgagagcttcggctctgttat 28925693  T
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28925694 ggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtcttgcatgagtc 28925758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 28933521 - 28933685
Alignment:
Q  105 aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctga-taaaagaatgctttaaccattctataaagatgagagcttcggctctgttat 203  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28933521 aacactttgttgttcaaaacgatgttatgatgaggactcgtgtcctgaataaaagaatgctttaaccattctaataagatgagagcttcggctctgttat 28933620  T
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28933621 ggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtcttgcatgagtc 28933685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 28946721 - 28946885
Alignment:
Q  105 aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctga-taaaagaatgctttaaccattctataaagatgagagcttcggctctgttat 203  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28946721 aacactttgttgttcaaaacgatgttatgatgaggactcgtgtcctgaataaaagaatgctttaaccattctaataagatgagagcttcggctctgttat 28946820  T
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28946821 ggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtcttgcatgagtc 28946885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 28932018 - 28932181
Alignment:
Q  105 aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgat-aaaagaatgctttaaccattctataaagatgagagcttcggctctgttat 203  Q
    |||||| ||||||||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28932018 aacactttgttgttcaaaacgat-ttatgatgaggactcgtgtcctgattaaaagaatgctttaaccattctaataagatgagagcttcggctctgttat 28932116  T
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28932117 ggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtcttgcatgagtc 28932181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 70 - 282
Target Start/End: Original strand, 23112767 - 23112979
Alignment:
Q  70 tcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgtta-tgatgaggactcatgtcctgataaaagaatgctttaa 168  Q
    ||||||||||||| | ||||||||||||  | || |||||||||||||||||| |  ||||| || |||||||| |||||||||| |  |||||||||||    
T  23112767 tcggtcctggaacaccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttagtggtgaggacttatgtcctgatga--gaatgctttaa 23112864  T
Q  169 ccattctataaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagt 267  Q
    |||||| | |  | |||| |   |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23112865 ccattcgacagcggtgagggtcacggccctgattatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagt 23112964  T
Q  268 cttagcggtggtgtc 282  Q
    |||||||||||||||    
T  23112965 cttagcggtggtgtc 23112979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 9775481 - 9775402
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9775481 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 9775402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 37805478 - 37805557
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37805478 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 37805557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 28910260 - 28910349
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatg 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  28910260 atatacataagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacactttgttgttcaaaacgatg 28910349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 28933455 - 28933544
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatg 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  28933455 atatacataagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacactttgttgttcaaaacgatg 28933544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 28946655 - 28946744
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatg 103  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  28946655 atatacataagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacactttgttgttcaaaacgatg 28946744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 28931952 - 28932036
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaa 98  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  28931952 atatacataagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacactttgttgttcaaaa 28932036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 41878105 - 41878228
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| ||| || | ||||||||||||||||| |||||||||||    
T  41878105 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgtatattttgaggagtcttagtggtgttgtcatgtc 41878203  T
Q  258 ttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||    
T  41878204 ttgcatgagtcttagcggtggtgtc 41878228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 19801966 - 19802097
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgagg 234  Q
    |||||||| ||||||||||    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| ||||||    
T  19801966 tgaggacttatgtcctgat----gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgagg 19802061  T
Q  235 agtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
     |||||||||| || |||||||| ||||||||||||    
T  19802062 ggtcttagtggtgtcgtcatgtcatgcatgagtctt 19802097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 28925552 - 28925617
Alignment:
Q  38 ataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  28925552 ataagcataaaaacgatgttatgatgaggacttcggtcctggaacactttgttgttcaaaacgatg 28925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 23081839 - 23081951
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  23081839 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 23081938  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  23081939 atgcatgagtctt 23081951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 23076391 - 23076503
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||| ||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  23076391 gaatgctttaaacattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 23076490  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  23076491 atgcatgagtctt 23076503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 26650460 - 26650350
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | ||||||||||||  ||||| ||||||||||||||||  ||||||  ||||||||||||||||| |||||||||||    
T  26650460 gaatgctttaaccattcaaaagcggtgagagcttcggtcctgtt-tggtaccacatgcatatctgcatta-ttgaggagtcttagtggtgttgtcatgtc 26650363  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  26650362 atgcatgagtctt 26650350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 26922045 - 26921935
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | ||||||||||||  ||||| ||||||||||||||||  ||||||  ||||||||||||||||| |||||||||||    
T  26922045 gaatgctttaaccattcaaaagcggtgagagcttcggtcctgtt-tggtaccacatgcatatctgcatta-ttgaggagtcttagtggtgttgtcatgtc 26921948  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  26921947 atgcatgagtctt 26921935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 39608973 - 39609084
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | ||||||||||||  ||||| |||||||||||||||| |||||||| || ||| |||||||||| || ||||||||    
T  39608973 gaatgctttaaccattcaaaagcggtgagagcttcggtcctgtt-tggtaccacatgcataattgcatttattaaggggtcttagtggtgtcgtcatgtc 39609071  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  39609072 atgcatgagtctt 39609084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 267
Target Start/End: Complemental strand, 19362676 - 19362548
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgagg 234  Q
    |||||||| ||||||||||    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||  |||||||| ||||||    
T  19362676 tgaggacttatgtcctgat----gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcatgattgcatttattgagg 19362581  T
Q  235 agtcttagtggagttgtcatgtcttgcatgagt 267  Q
     |||||||||| || |||||||| |||||||||    
T  19362580 ggtcttagtggtgtcgtcatgtcatgcatgagt 19362548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 37566096 - 37565983
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||  |||||||||||||||| |||||| | ||||||||||||||||| ||| |||||||    
T  37566096 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtc-tggtaccacatgcataattgcatattttgaggagtcttagtggtgttatcatgtc 37565998  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||||||||    
T  37565997 atgcatgagtcttag 37565983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 5341819 - 5341930
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| || ||||| |||||| |||||||||| || ||||||||    
T  5341819 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattacatttattgaggggtcttagtggtgtcgtcatgtc 5341917  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  5341918 atgcatgagtctt 5341930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 23544961 - 23545073
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| ||||||| |||||||| |||||||| ||||||  ||||||||| || ||||||||    
T  23544961 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccgcatgcataattgcatttattgagggatcttagtggtgtcgtcatgtc 23545060  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  23545061 atgcatgagtctt 23545073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 24057658 - 24057547
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  || || |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  24057658 gaatgctttaaccattcaaaagcggtgagggcttcggtcctatt-tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 24057560  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  24057559 atgcatgagtctt 24057547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 25419879 - 25419767
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| ||||||||||||||||  ||||||| |||||| |||||||||| |  ||||||||    
T  25419879 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataaatgcatttattgaggggtcttagtggtgacgtcatgtc 25419780  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  25419779 atgcatgagtctt 25419767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 18409149 - 18409248
Alignment:
Q  158 gaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatg 255  Q
    ||||||||||||||||| || |  | ||||||||||||| |||  ||||||||||| ||||||||||||||||| |||||||||||| || |||||||||    
T  18409149 gaatgctttaaccattcaattagcggtgagagcttcggccctgaatatggtaccacgtgcatagttgcatttgtcgaggagtcttagaggtgttgtcatg 18409248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 20990359 - 20990250
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| |  |||||||||||||||| || ||||||||    
T  20990359 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat--tgaggagtcttagtggtgtcgtcatgtc 20990263  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  20990262 atgcatgagtctt 20990250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 16775143 - 16775253
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||| ||||||||||| |||||| | ||||||||||||||||| |||||||||||    
T  16775143 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtgccacatgcataattgcatat-ttgaggagtcttagtggtgttgtcatgtc 16775240  T
Q  258 ttgcatgagtctt 270  Q
     || |||||||||    
T  16775241 atggatgagtctt 16775253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 19511016 - 19510948
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||    |||||||||||||||||||    
T  19511016 ttatggtaccacatgcatagttgcatttattgaggagtattagggggaaggtcatgtcttgcatgagtc 19510948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 28259974 - 28260084
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |    |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||| || ||||||||    
T  28259974 gaatgctttaaccattcaaaagcagtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtc 28260071  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  28260072 atgcatgagtctt 28260084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 18941314 - 18941423
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||  |||||| |||||||||| || ||||||||    
T  18941314 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatta-ttgaggggtcttagtggtgtcgtcatgtc 18941411  T
Q  258 ttgcatgagtct 269  Q
     |||||||||||    
T  18941412 atgcatgagtct 18941423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 22007944 - 22008102
Alignment:
Q  63 gaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaa 160  Q
    |||| |||||| |||||||||| ||||||||||||  | || |||||| ||||||||||| | |||||  |   |||||||| | ||||||| ||| |||    
T  22007944 gagggcttcggccctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcgatgtttagcggtgaggacttaggtcctgaaaaatgaa 22008043  T
Q  161 tgctttaaccattctataaa-gatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    ||||||||||||||||| |  | |||| ||| |||| ||| ||||||||||||||||||    
T  22008044 tgctttaaccattctattagcggtgagggctccggccctgattatggtaccacatgcat 22008102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 22379540 - 22379474
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtct 269  Q
    ||||||||||||||||  ||||||| |||||| |||||||||| ||||||||||| ||||| |||||    
T  22379540 tggtaccacatgcatatctgcatttattgaggggtcttagtggtgttgtcatgtcatgcattagtct 22379474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 21494931 - 21494878
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  21494931 atagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 21494878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 24617894 - 24617946
Alignment:
Q  217 tagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  24617894 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtctttgcatgagtc 24617946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 24714125 - 24714177
Alignment:
Q  217 tagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  24714125 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtctttgcatgagtc 24714177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 24747153 - 24747205
Alignment:
Q  217 tagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  24747153 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtctttgcatgagtc 24747205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 18408981 - 18409016
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  18408981 atatacacaagtggagtcagttgcataagcataaaa 18409016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 21829700 - 21829665
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  21829700 atatacacaagtggagtcagttgcataagcataaaa 21829665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 24751647 - 24751729
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |  | |||| ||| |||| |||  |||||||||||||||||| |||||||| |||||||||||    
T  24751647 gaatgctttaaccattctacagcggtgagggctacggccctgaatatggtaccacatgcatatttgcatttattgaggagtct 24751729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 7773749 - 7773858
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  |||||  ||||||||||||||| |||||| | | ||| ||||||||||| || ||||||||    
T  7773749 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt--ggtaccacatgcataattgcatatttggag-agtcttagtggtgtagtcatgtc 7773845  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  7773846 atgcatgagtctt 7773858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 22439886 - 22439927
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  22439886 tatggtaccacatgcatagttgcatttatcgaggagtcttag 22439927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 6404477 - 6404512
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  6404477 atatacacaagtggagtcagttgcataagcacaaaa 6404512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 24668972 - 24669007
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||| |||||||||    
T  24668972 atatacacaagtggagtcagttgcatgagcataaaa 24669007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 24738741 - 24738776
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||| |||||||||    
T  24738741 atatacacaagtggagtcagttgcatgagcataaaa 24738776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 24751510 - 24751545
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||| |||||||||    
T  24751510 atatacacaagtggagtcagttgcatgagcataaaa 24751545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 427229 - 427182
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtc 252  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||||||    
T  427229 tggtaccacatgcatg--tgcatttgtcgaggagtcttagtggagttgtc 427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 24669153 - 24669191
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  24669153 tatggtaccacatgcatatttgcatttattgaggagtct 24669191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 24738922 - 24738960
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  24738922 tatggtaccacatgcatatttgcatttattgaggagtct 24738960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 19800442 - 19800522
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | |||||||||||    
T  19800442 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcatatttgcatctattgaggagtct 19800522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 427416 - 427384
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||| ||||||||||    
T  427416 atatacacaagtggagtcagtttcataagcata 427384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 10035113 - 10035058
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgt-cttgcatgagtc 268  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||  |||||||||||    
T  10035113 tgcatagtcgcatt-gttgaggagtcttagtggtgttgtcatgtagttgcatgagtc 10035058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 20843342 - 20843310
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||||| |||||||||||||    
T  20843342 atatacacaagtggagtcaattgcataagcata 20843310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 23561589 - 23561621
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||||| |||||||||||||    
T  23561589 atatacacaagtggagtcaattgcataagcata 23561621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 221; Significance: 1e-121; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 80406 - 80670
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaat-gatgaaacactat 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  80406 atatacacaagtggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaaacgatggaacactat 80505  T
Q  113 gttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  80506 gttgttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagggcttcggctctgttatggtaccaca 80605  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  80606 tgcatagttgcaattgttgaggagtcttagtagagttgtcatgtcctgcatgagtcttagaggtg 80670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 61297 - 61336
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtca 253  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  61297 tgcatagttgcatt-gttgaggagtcttagcggagttgtca 61336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 73085 - 73124
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtca 253  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  73085 tgcatagttgcatt-gttgaggagtcttagcggagttgtca 73124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 16147746 - 16148010
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaat-gatgaaacactat 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  16147746 atatacacaagtggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaaacgatggaacactat 16147845  T
Q  113 gttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16147846 gttgttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagggcttcggctctgttatggtaccaca 16147945  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  16147946 tgcatagttgcaattgttgaggagtcttagtagagttgtcatgtcctgcatgagtcttagaggtg 16148010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 14910780 - 14910520
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||| ||||||||||||||||||||| || ||        ||| | ||||||||||||||| ||||||||||||  |||| |||||||||    
T  14910780 atatacacaagtgg-gtcagttgcataagcataaaagcggtg--------agggcctcggtcctggaacgccttgtcgttcaaagcgatggaacactatg 14910690  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccaca 212  Q
    ||||||||| | |||||| | |||||||||||||||| |||||||||||||||||||||||||||  | |||| ||| |||| ||| |||||||||||||    
T  14910689 ttgttcaaagcgatgttagggtgaggactcatgtccttataaaagaatgctttaaccattctatagcggtgagggctccggccctgattatggtaccaca 14910590  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14910589 tgcatagttgcatttgttgagtagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 14910520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 15533800 - 15533721
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15533800 tggtaccacatgcatagttgcttttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 15533721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 36037527 - 36037448
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36037527 tggtaccgcatgcatagttgcatttgtagaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 36037448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 217
Target Start/End: Complemental strand, 40908733 - 40908583
Alignment:
Q  69 ttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaagaatgcttt 166  Q
    ||||||||||||| || ||||| |||||| || || ||||| |||||||||||| |  ||||  | | ||||||||||||||||||||||||||||||||    
T  40908733 ttcggtcctggaatgccttgtcattcaaagtggtggaacacaatgttgttcaaagcggtgtttaacggtgaggactcatgtcctgataaaagaatgcttt 40908634  T
Q  167 aaccattctataaagatgagagcttcggctctgttatggtaccacatgcat 217  Q
    ||||||||||||  | |||| ||| |||| |||||||||||||||||||||    
T  40908633 aaccattctatagcggtgagggctccggccctgttatggtaccacatgcat 40908583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 217
Target Start/End: Complemental strand, 27905359 - 27905211
Alignment:
Q  70 tcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaa 168  Q
    |||||||| |||||| ||||||||||||  |||| |||||||||||||||||| |  |||||  |  |||||||||||||||||||||||||||||||||    
T  27905359 tcggtcctagaacgccttgtcgttcaaagcgatggaacactatgttgttcaaagcggtgttagcggagaggactcatgtcctgataaaagaatgctttaa 27905260  T
Q  169 ccattctataaagatgagagcttcggctctgttatggtaccacatgcat 217  Q
    ||||||||||  | |||| ||||| |  ||| |||||||||||||||||    
T  27905259 ccattctatagcggtgagggcttcagtcctgatatggtaccacatgcat 27905211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 1651039 - 1651236
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||| |||||||||||||||||||||||| || ||        ||| |||| | |||||||||| ||||||||||||  | || |||||  ||    
T  1651039 atatacacaagcggagtcagttgcataagcataaaagcggtg--------agggcttctgccctggaacgccttgtcgttcaaagcggtggaacacattg 1651130  T
Q  114 ttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    ||||||||| |   |||  | | ||||||||||||||||||||||||||||||||||||||||||||  | |||| ||| || | |||||||||||||||    
T  1651131 ttgttcaaagcggagtttgacggtgaggactcatgtcctgataaaagaatgctttaaccattctatagcggtgagggctccgaccctgttatggtaccac 1651230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 20889383 - 20889270
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||| |||||||||||    
T  20889383 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatattttgaggagtcttagtggtgttgtcatgtc 20889285  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||||||||    
T  20889284 atgcatgagtcttag 20889270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 10977137 - 10977251
Alignment:
Q  158 gaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatg 255  Q
    ||||||||||||||||| || |  | |||| ||||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  10977137 gaatgctttaaccattcaattagcggtgagggcttcggctctgaatatggtaccacatgcatagtcgcatttattgaggagtcttagtggtgttgtcatg 10977236  T
Q  256 tc--ttgcatgagtc 268  Q
    ||  |||||||||||    
T  10977237 tcatttgcatgagtc 10977251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 46044944 - 46045056
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| ||  |||||||    
T  46044944 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgaggggtcttagtggtgtcatcatgtc 46045043  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  46045044 atgcatgagtctt 46045056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 42220440 - 42220330
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | ||||  ||||||  ||||| |||||||||||||||| |||||||| ||||||||||||||||| || ||||||||    
T  42220440 gaatgctttaaccattcaaaagcggtgaggacttcggtcctgtt-tggtaccacatgcataattgcatttattgaggagtcttagtggtgtcgtcatgtc 42220342  T
Q  258 ttgcatgagtct 269  Q
     |||||||||||    
T  42220341 atgcatgagtct 42220330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 14485705 - 14485470
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||| ||||||||||||||||||||| ||          |||| |||||| |||||||| | ||||||||||||  | || |||||| ||    
T  14485705 atatacacaagtgg-gtcagttgcataagcataaaagcgg---------gagggcttcggccctggaacaccttgtcgttcaaagcggtggaacactttg 14485616  T
Q  114 ttgttcaaaacaatg-ttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgttatggtacca 210  Q
    ||||||||| |  || |||  | |||||||||||||||||| ||||||||||||||||||||| || |  | |||| |||||||| ||  ||||||||||    
T  14485615 ttgttcaaagcggtgattagcggtgaggactcatgtcctga-aaaagaatgctttaaccattcgattagcggtgagggcttcggccctaatatggtacca 14485517  T
Q  211 catgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    || ||||||| | | || | |||||||||||| || |||||||||||    
T  14485516 caagcatagtcgtaattatcgaggagtcttagaggtgttgtcatgtc 14485470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 14821370 - 14821304
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatg-tcttgcatgagtc 268  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| | |||||||||||    
T  14821370 tggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgttgttgcatgagtc 14821304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 20895002 - 20894889
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||| ||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||| |||||||||||    
T  20895002 gaatgttttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatattttgaggagtcttagtggtgttgtcatgtc 20894904  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||| ||||||    
T  20894903 atgcatgaatcttag 20894889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 49548658 - 49548771
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||| ||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||| |||||||||||    
T  49548658 gaatgttttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatattttgaggagtcttagtggtgttgtcatgtc 49548756  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||| ||||    
T  49548757 atgcatgagttttag 49548771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 31665024 - 31664955
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    ||||||||||||||||  ||||| | ||||||||||||||||| ||||||||||| ||||||||||||||    
T  31665024 tggtaccacatgcataactgcatattttgaggagtcttagtggtgttgtcatgtcatgcatgagtcttag 31664955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 19128417 - 19128528
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||||| || | |  | |||| |||||||  ||||| ||||||||||||||||  ||||||| ||||||||||||||||| || ||||||||    
T  19128417 gaatgctttaaccactcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcatatctgcatttattgaggagtcttagtggtgtcgtcatgtc 19128515  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  19128516 atgcatgagtctt 19128528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 41404780 - 41404892
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  | ||| |||||||||||||||| |||||||| |||||| |||||||||| || || |||||    
T  41404780 gaatgctttaaccattcaaaagtggtgagggcttcggtccagttttggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgttatgtc 41404879  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  41404880 atgcatgagtctt 41404892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 268
Target Start/End: Original strand, 14556114 - 14556308
Alignment:
Q  75 cctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccat 172  Q
    |||||||||| ||||||||||||  | || |||||| ||||||||||| |  ||||  |   |||||||| ||||||||| |||||||||||||||||||    
T  14556114 cctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaaagaatgctttaaccat 14556213  T
Q  173 tcta-taaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    || | ||  | |||| |||||||| |||  |||||||||||||||||   ||||  ||| ||||||||||||||||||||| | || |||||||||||    
T  14556214 tcgattagcggtgagggcttcggccctgaatatggtaccacatgcat--gtgca-ctgtagaggagtcttagtggagttgttaagtgttgcatgagtc 14556308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 33097102 - 33096992
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  |  ||| |||||||  ||||| ||||||||||||||||  ||||||| ||||||||||||||||| || ||||||||    
T  33097102 gaatgctttaaccattcaaaagcggcgagggcttcggtcctgtt-tggtaccacatgcatatctgcatttattgaggagtcttagtggtgtcgtcatgtc 33097004  T
Q  258 ttgcatgagtct 269  Q
     |||||||||||    
T  33097003 atgcatgagtct 33096992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 13886680 - 13886614
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||||||| ||| |||||||||||    
T  13886680 tggtaccacatgcatagtcgcatttgttgaggagtcttaggggtgttgtcaagtcattgcatgagtc 13886614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 15307015 - 15306961
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||||||||||    
T  15307015 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgttgtcatgtc 15306961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 33221377 - 33221266
Alignment:
Q  159 aatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtct 258  Q
    |||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| ||||||  ||||||||||||| |||| || ||||||||     
T  33221377 aatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcatatttgcata-gttgaggagtcttggtggtgtcgtcatgtca 33221280  T
Q  259 tgcatgagtcttag 272  Q
    ||||||||||||||    
T  33221279 tgcatgagtcttag 33221266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 2972807 - 2972917
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | |||| |||||||||||| || ||||||||    
T  2972807 gaatgctttaaccattcaaaagcggtgagtgcttcggtcctgtt-tggtaccacatgcataattgcatat-ttgaagagtcttagtggtgtcgtcatgtc 2972904  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  2972905 atgcatgagtctt 2972917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 14048227 - 14048121
Alignment:
Q  69 ttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgcttt 166  Q
    ||||| |||||||||| ||||||||||||| | || |||||| ||||||||||| |  ||||  |   |||||||||||||||||| |||||||||||||    
T  14048227 ttcggccctggaacgccttgtcgttcaaaacggtggaacactttgttgttcaaagcggtgtttagcggtgaggactcatgtcctga-aaaagaatgcttt 14048129  T
Q  167 aaccattc 174  Q
    ||||||||    
T  14048128 aaccattc 14048121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 267
Target Start/End: Complemental strand, 14063053 - 14062866
Alignment:
Q  75 cctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccat 172  Q
    |||||||||| ||||||||||||  | || |||||| ||||||||||| |  ||||  |   |||||||| ||||||||| |||||||||||||||||||    
T  14063053 cctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtcctga-aaaagaatgctttaaccat 14062955  T
Q  173 tcta-taaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagt 267  Q
    || | ||  | |||| |||||||| ||| |||||||||||||        ||||||||| ||||||||||||||||| ||||  |||||||||||||    
T  14062954 tcgattagcggtgagggcttcggccctgattatggtaccaca--------tgcatttgtagaggagtcttagtggaggtgtcgagtcttgcatgagt 14062866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 21881600 - 21881490
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||| || ||||||||    
T  21881600 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtc 21881503  T
Q  258 ttgcatgagtctt 270  Q
     ||||||| ||||    
T  21881502 atgcatgaatctt 21881490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 14048396 - 14048244
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||||||||||||| ||||||| ||          |||| ||| || |||||||||| ||||||||||||  | || |||||| ||    
T  14048396 atatacacaagtggagtcagttgcataatcataaaagcgg---------gagggctttggccctggaacgccttgtcgttcaaagcggtggaacactttg 14048306  T
Q  114 ttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccattc 174  Q
    ||||||||| |  ||||  |   |||||||||||||||||| |||||||||||||||||||||    
T  14048305 ttgttcaaagcggtgtttagcggtgaggactcatgtcctga-aaaagaatgctttaaccattc 14048244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 15406993 - 15406872
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| ||||||||| ||| |||||||||||||||||  ||  |  ||| |||||||| |||  ||||||||||||||||||| |||||||||  ||    
T  15406993 tgaggacttatgtcctga-aaatgaatgctttaaccattcattagcgg-gagggcttcggccctgaatatggtaccacatgcatagctgcatttgtcaag 15406896  T
Q  234 gagtcttagtggagttgtcatgtc 257  Q
    ||||||||| || |||||||||||    
T  15406895 gagtcttagaggtgttgtcatgtc 15406872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 11847070 - 11847025
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtgg 245  Q
    |||||||||||||||||||||||||||| | |||||||||||||||    
T  11847070 ttatggtaccacatgcatagttgcatttatcgaggagtcttagtgg 11847025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 16152642 - 16152526
Alignment:
Q  63 gaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaa 160  Q
    |||| |||||| |||||||||| ||||||||||||  | || |||||| ||||||||||| |  ||||  |   |||||||| ||||||||| ||| |||    
T  16152642 gagggcttcggccctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaatgaa 16152543  T
Q  161 tgctttaaccattctat 177  Q
    |||||||||||||||||    
T  16152542 tgctttaaccattctat 16152526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 13452242 - 13452204
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13452242 tatggtaccacatgcatatttgcatttgttgaggagtct 13452204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 15244113 - 15244047
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||| |||||||||||| ||||||||||||||||||||| || ||||| || || |||||||||||    
T  15244113 tggtaacacatgcatagtcgcatttgttgaggagtcttagaggggttgtgatatcattgcatgagtc 15244047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 22726056 - 22726106
Alignment:
Q  217 tagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgag 266  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  22726056 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtcattgcatgag 22726106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 16156788 - 16156672
Alignment:
Q  63 gaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaa 160  Q
    |||| |||||| | |||||||| ||||||||||||  | || |||||| ||||||||||| |  ||||  |   |||||||| ||||||||| ||| |||    
T  16156788 gagggcttcggccttggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaatgaa 16156689  T
Q  161 tgctttaaccattctat 177  Q
    |||||||||||||||||    
T  16156688 tgctttaaccattctat 16156672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 18212154 - 18212114
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  18212154 tatggtaccacatgcatagttgcatttg-tgaggagtcttag 18212114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 899602 - 899492
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| ||||| |  ||||| ||||||| |||||||| |||||||| |||||| |||||||||| ||  |||||||    
T  899602 gaatgctttaaccattcaaaagcggtgagggcttcagtcctgtt-tggtaccgcatgcataattgcatttattgagg-gtcttagtggtgtcatcatgtc 899505  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  899504 atgcatgagtctt 899492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 12932037 - 12932005
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  12932037 atatacacaagtggagtcagttgcataagcata 12932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 15360804 - 15360836
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  15360804 atatacacaagtggagtcagttgcataagcata 15360836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 17176560 - 17176528
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  17176560 atatacacaagtggagtcagttgcataagcata 17176528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 26077807 - 26077890
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||  | |||| |||||| | ||| ||||||||||||||||||    
T  26077807 tgaggactcatgtcctga-aaaagaatgctttaaccattcgattagcggtgagggcttcgaccctgattatggtaccacatgcat 26077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 30146962 - 30146927
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||||| |||||||    
T  30146962 atatacacaagtggagtcagttgcataatcataaaa 30146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 30396162 - 30396096
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    ||||||||||||||||  ||||||  |||||| ||||||||||  |||||||||| ||||||||||||    
T  30396162 tggtaccacatgcatatctgcatta-ttgaggggtcttagtggttttgtcatgtcatgcatgagtctt 30396096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 37881431 - 37881374
Alignment:
Q  183 tgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||  ||||| |||||    
T  37881431 tgagggcttcggctctgattatggtaccacatgcatatttgcattctttgagaagtct 37881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 42956097 - 42956177
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||  |||||||||||||||| |||||||| |||||||||||    
T  42956097 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtc-tggtaccacatgcatatttgcatttattgaggagtct 42956177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 45959817 - 45959897
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | ||||||||||||  ||||  |||||||||||||||| |||||||| | |||||||||    
T  45959817 gaatgctttaaccattcaaaagcggtgagagcttcggtcctgtc-tggtaccacatgcatatttgcatttatggaggagtct 45959897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 47872497 - 47872577
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||| ||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||||||||    
T  47872497 gaatgctttaatcattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatttattgaggagtct 47872577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 53905295 - 53905328
Alignment:
Q  13 aatatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||| |||||||||||||||    
T  53905295 aatatacacaagtggagtgagttgcataagcata 53905328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 54845023 - 54845103
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||  |||||||||||||||| |||||||| |||||||||||    
T  54845023 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtc-tggtaccacatgcatatttgcatttattgaggagtct 54845103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 18166267 - 18166299
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||||| |||||||||||||    
T  18166267 atatacacaagtggagtcaattgcataagcata 18166299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 40908779 - 40908747
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||| |||||||||||||||||||||    
T  40908779 atatacacaagcggagtcagttgcataagcata 40908747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 29097007 - 29096751
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  29097007 atatacactagtggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtcctggaacgccttgtcgttcaaaatgatggaacactatg 29096908  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29096907 t-gttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 29096809  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29096808 gcatagttgca-ttgttgaggagtcttagtagagttgtcatgtcttgcatgagtcttag 29096751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 9099984 - 9100240
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||||||    
T  9099984 atatacactagtggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtcctggcacgccttctcgttcaaaatgatggaacactatg 9100083  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9100084 t-gttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 9100182  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  9100183 gcatagttgca-ttgttgaggagtcttagtagagttgtcatgtcttgcatgagtcttag 9100240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 4476561 - 4476300
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  4476561 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 4476470  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  4476469 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 4476370  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4476369 tgcatagtcgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 4476300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 20008860 - 20009117
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaat-gatgaaacactat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||||||  |||| ||||||||    
T  20008860 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaaacgatggaacactat 20008951  T
Q  113 gttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  20008952 gttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccac 20009051  T
Q  212 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  20009052 atgcatagttacatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 20009117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 21365448 - 21365699
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  21365448 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 21365539  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  21365540 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgatatggtaccaca 21365639  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  21365640 tgcataattgcatttgttgaggagtcttagaagggttgtcatgtcttgcatgagtcttag 21365699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 23969430 - 23969681
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  23969430 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 23969521  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  23969522 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgatatggtaccaca 23969621  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||| |||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  23969622 tgcataattgcatttgttgaggagtcttagaagggttgtcatgtcttgcatgagtcttag 23969681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 111 - 272
Target Start/End: Complemental strand, 25634255 - 25634093
Alignment:
Q  111 atgttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtacc 209  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  25634255 atgttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgatatggtacc 25634156  T
Q  210 acatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  25634155 acatgcatagttgcatttgttgataagtcttagtagagttgtcatgtcttgcatgagtcttag 25634093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 62 - 270
Target Start/End: Complemental strand, 15457621 - 15457412
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgata-aaagaa 160  Q
    ||||||| ||||||||||||||| ||||||||||||  | || |||||||||||||||||| |  |||||    ||||||||||||||||||| ||||||    
T  15457621 tgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttaatgggaggactcatgtcctgatataaagaa 15457522  T
Q  161 tgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 260  Q
    ||||||||||||||||||| | |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||    
T  15457521 tgctttaaccattctataacggtgagggcttcggccctgatatggtaccacatgcatagttgcatttgttgaggagtcttagaggagtcgtcatgtcatg 15457422  T
Q  261 catgagtctt 270  Q
    ||||||||||    
T  15457421 catgagtctt 15457412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 62 - 270
Target Start/End: Complemental strand, 15464216 - 15464007
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgata-aaagaa 160  Q
    ||||||| ||||||||||||||| ||||||||||||  | || |||||||||||||||||| |  |||||    ||||||||||||||||||| ||||||    
T  15464216 tgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttaatgggaggactcatgtcctgatataaagaa 15464117  T
Q  161 tgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 260  Q
    ||||||||||||||||||| | |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||    
T  15464116 tgctttaaccattctataacggtgagggcttcggccctgatatggtaccacatgcatagttgcatttgttgaggagtcttagaggagtcgtcatgtcatg 15464017  T
Q  261 catgagtctt 270  Q
    ||||||||||    
T  15464016 catgagtctt 15464007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 31251565 - 31251344
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||      |||| ||||||||||||||| ||||| ||||||  | || |||||||||    
T  31251565 atatacacaagtggagttagttgcataagcataaaaacg--gtta------ggacctcggtcctggaacgccttgtcattcaaagcggtggaacactatg 31251474  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaa-gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||| |  |||||    |||||||||||||||||||||| |||||||||||||||||||||| | |||| |||||||| ||| |||||  |||||    
T  31251473 ttgttcaaagcggtgttaatgggaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggcttcggccctgatatggcgccaca 31251374  T
Q  213 tgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||||||    
T  31251373 tgcatagttgcatttgttgaggagtcttag 31251344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 154 - 272
Target Start/End: Complemental strand, 31250355 - 31250237
Alignment:
Q  154 aaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 253  Q
    |||||||||||||||||||||||||| | |||| |||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  31250355 aaaagaatgctttaaccattctataacggtgagggcttcggccctgatatggcgccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 31250256  T
Q  254 tgtcttgcatgagtcttag 272  Q
    |||| ||||||||||||||    
T  31250255 tgtcctgcatgagtcttag 31250237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 20011080 - 20011176
Alignment:
Q  181 gatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  20011080 gatgagggcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 20011176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 62 - 217
Target Start/End: Original strand, 19300690 - 19300846
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaa 160  Q
    ||||| |||||||| ||||||||||||||||||||| || || |||||||||||||||||| |  |||||  | ||||||||||||||||||||||||||    
T  19300690 tgagggcttcggtcttggaacgctttgtcgttcaaagtggtggaacactatgttgttcaaagcggtgttagcggtgaggactcatgtcctgataaaagaa 19300789  T
Q  161 tgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcat 217  Q
    ||||||||||||||||||  | |||| |||||||  ||| |||||||||||||||||    
T  19300790 tgctttaaccattctatagcggtgagggcttcggtcctgatatggtaccacatgcat 19300846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 28290367 - 28290449
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28290367 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagtggtggtgtc 28290449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 12941814 - 12941735
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941814 tggtaccacatgcatagtttcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 12941735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 25347099 - 25347017
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25347099 ttatggtaccacatgcatagttgcattttttgaggtgtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 25347017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 217
Target Start/End: Original strand, 14581877 - 14582034
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaaga 159  Q
    |||||||||||||||||||| || ||||| |||||| ||  | ||||| |||||||||||| |  ||||  | | ||||||||||||||||||| |||||    
T  14581877 tgaggacttcggtcctggaatgccttgtcattcaaagtggaggaacacaatgttgttcaaagcggtgtttaacggtgaggactcatgtcctgatgaaaga 14581976  T
Q  160 atgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcat 217  Q
    |||||||||||||||||||  | |||| || ||||| |||||||||||||||||||||    
T  14581977 atgctttaaccattctatagcggtgagggcctcggccctgttatggtaccacatgcat 14582034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 23021425 - 23021556
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgagg 234  Q
    |||||||| ||||||||||    |||| |||||||||||||| |  | |||| |||||||  ||||| |||||||||||||||| |||||||| ||||||    
T  23021425 tgaggacttatgtcctgat----gaattctttaaccattctaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgagg 23021520  T
Q  235 agtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
     |||||||||| || |||||||| ||||||||||||    
T  23021521 tgtcttagtggtgtcgtcatgtcatgcatgagtctt 23021556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 12447291 - 12447403
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  12447291 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 12447390  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  12447391 atgcatgagtctt 12447403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 14995984 - 14996128
Alignment:
Q  75 cctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaagaatgctttaaccat 172  Q
    |||||||||| ||||||||||||  | || |||||  ||||||||||| |  ||||  ||| |||||||||||||||||| ||| |||||||||||||||    
T  14995984 cctggaacgccttgtcgttcaaagcggtggaacacattgttgttcaaagcggtgtttaatggtgaggactcatgtcctga-aaaggaatgctttaaccat 14996082  T
Q  173 tctataaa-gatgagagcttcggctctgttatggtaccacatgcat 217  Q
    ||||| |  | ||||||||||||||||| |||||||||| ||||||    
T  14996083 tctattagcggtgagagcttcggctctgatatggtaccatatgcat 14996128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 17894617 - 17894730
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||  |||||||||||||||| |||||| | ||||||||||||||||| |||||||||||    
T  17894617 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtc-tggtaccacatgcataattgcatattttgaggagtcttagtggtgttgtcatgtc 17894715  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||||||||    
T  17894716 atgcatgagtcttag 17894730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 10464305 - 10464417
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||| || ||||||||    
T  10464305 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtc 10464402  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||||||||    
T  10464403 atgcatgagtcttag 10464417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 10470827 - 10470939
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||| || ||||||||    
T  10470827 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtc 10470924  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||||||||    
T  10470925 atgcatgagtcttag 10470939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 17207833 - 17207944
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| | |||||  ||||| |||||||||||||||| |||||||  ||||||||||||||||| || ||||||||    
T  17207833 gaatgctttaaccattcaaaagcggtgagggtttcggtcctgttttggtaccacatgcataattgcatta-ttgaggagtcttagtggggtcgtcatgtc 17207931  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  17207932 atgcatgagtctt 17207944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 27767417 - 27767306
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| ||||||||||||||||  ||||||| ||||||||||||||||| || ||||||||    
T  27767417 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcatatatgcatttattgaggagtcttagtggtgtcgtcatgtc 27767319  T
Q  258 ttgcatgagtctt 270  Q
     |||| |||||||    
T  27767318 atgcaagagtctt 27767306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 268
Target Start/End: Original strand, 8768208 - 8768390
Alignment:
Q  75 cctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattc 174  Q
    |||||||||| ||||||||||||||| || ||||||| |||||||||| |        | |||||| ||||||||||| |||||||||||||||||||||    
T  8768208 cctggaacgccttgtcgttcaaaatggtggaacacta-gttgttcaaagc--------ggtgaggattcatgtcctga-aaaagaatgctttaaccattc 8768297  T
Q  175 tataa-agatgagagcttcggctctg-ttatggtaccacatgcat-agttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
     ||||  | |||| |||||||| ||| |||||||||||||||||| |||     |||| |||||||||||||||||| ||  ||| |||||||||||    
T  8768298 gataattggtgagggcttcggccctgattatggtaccacatgcatgagt----attgtagaggagtcttagtggagtggttgtgtgttgcatgagtc 8768390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 18786078 - 18786010
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgt-cttgcatgagtc 268  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||  |||||||||||    
T  18786078 tatggtaccacatgcatagttgcatttgttcaggagtcttattggtgttgtcctgtaattgcatgagtc 18786010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 25749711 - 25749655
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  25749711 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 25749655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 8760522 - 8760653
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataa-agatgagagcttcggctctg-ttatggtaccacatgcat-agttgcatttgttg 231  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||  | |||| |||||||  ||| |||||||||||||||||| |||     |||| |    
T  8760522 tgaggactcatgtcctga-aaaagaatgctttaaccattcgataagtggtgagggcttcggtcctgattatggtaccacatgcatgagt----attgtag 8760616  T
Q  232 aggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||||| ||  ||| |||||||||||    
T  8760617 aggagtcttagtggagtggttgtgtgttgcatgagtc 8760653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 19472490 - 19472556
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||  |||||||||| |||||||||||    
T  19472490 tggtaccacatgcatagtcgcatttgttgaggggtcttagaggtattgtcatgtcattgcatgagtc 19472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 25396014 - 25395948
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||| ||||||||||||||||||||| || || ||||| || |||||||||||    
T  25396014 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgtcgtcatatcattgcatgagtc 25395948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 13940453 - 13940380
Alignment:
Q  197 ctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    ||||| |||||||||||||||| |||||| | |||||| |||||||||| || |||||||| | ||||||||||    
T  13940453 ctgttttggtaccacatgcataattgcatctattgaggggtcttagtggtgtagtcatgtcatccatgagtctt 13940380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 29925753 - 29925643
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | ||||  ||||||  ||||| |||||||||||||||| ||||||   ||||||||||||||||| || ||||||||    
T  29925753 gaatgctttaaccattcaaaaggggtgaggacttcggtcctgtt-tggtaccacatgcatatttgcataa-ttgaggagtcttagtggtgtcgtcatgtc 29925656  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  29925655 atgcatgagtctt 29925643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 17414192 - 17414157
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  17414192 atatacacaagtggagtcagttgcataagcataaaa 17414157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 19468019 - 19467984
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  19468019 atatacacaagtggagtcagttgcataagcataaaa 19467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 243
Target Start/End: Original strand, 24513809 - 24514030
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||| ||||||||||||||||| ||          ||||  ||||| |||||||||| |||||||| |||  | || |||||| ||    
T  24513809 atatacacaagtggagtcggttgcataagcataaaagcg---------ggagggtttcggccctggaacgccttgtcgtttaaagcggtggaacactttg 24513899  T
Q  114 ttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaagaatgctttaaccattc-tataaagatgagagcttcggctctg-ttatggtacc 209  Q
    ||||||||| |  ||||    | ||| |||| ||||||||  |||||||||||||||||||||  |||  | |||| ||| |||| |||  |||||||||    
T  24513900 ttgttcaaagcggtgtttagcggtgatgacttatgtcctg--aaaagaatgctttaaccattcgaatagcggtgagggctccggccctgaatatggtacc 24513997  T
Q  210 acatgcatagttgcatttgttgaggagtcttagt 243  Q
    ||||||||| |||||||||| |||||||||||||    
T  24513998 acatgcata-ttgcatttgtcgaggagtcttagt 24514030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 94586 - 94666
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||||||||    
T  94586 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcatatttgcatttattgaggagtct 94666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 12167254 - 12167217
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||||||||||||||||||||||||||| |||||||||    
T  12167254 ttatggtaccacatgcatagttgcatttattgaggagt 12167217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 18799401 - 18799360
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  18799401 tatggtaccacatgcatagttgcatttttcgaggagtcttag 18799360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 19286163 - 19286126
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||||||||||||||||||||||||||| |||||||||    
T  19286163 ttatggtaccacatgcatagttgcatttattgaggagt 19286126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 19787033 - 19787070
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||||||||||||||||||||||||||| |||||||||    
T  19787033 ttatggtaccacatgcatagttgcatttattgaggagt 19787070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 19877347 - 19877310
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||||||||||||||||||||||||||| |||||||||    
T  19877347 ttatggtaccacatgcatagttgcatttattgaggagt 19877310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 19883123 - 19883086
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||||||||||||||||||||||||||| |||||||||    
T  19883123 ttatggtaccacatgcatagttgcatttattgaggagt 19883086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 10582820 - 10582852
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  10582820 atatacacaagtggagtcagttgcataagcata 10582852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 19472305 - 19472337
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  19472305 atatacacaagtggagtcagttgcataagcata 19472337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 24720795 - 24720763
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  24720795 atatacacaagtggagtcagttgcataagcata 24720763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 25396200 - 25396168
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  25396200 atatacacaagtggagtcagttgcataagcata 25396168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 5290122 - 5290157
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||| |||||||||    
T  5290122 atatacacaagtggagtcagttgcatgagcataaaa 5290157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 14616253 - 14616288
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  14616253 atatacacaagtggagtcagttgcataagcacaaaa 14616288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 14724560 - 14724525
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  14724560 atatacacaagtggagtcagttgcataagcacaaaa 14724525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 19451481 - 19451446
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||| ||||||    
T  19451481 atatacacaagtggagtcagttgcataagtataaaa 19451446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 24562299 - 24562260
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  24562299 ttatggtaccacatgcatatttgcatttattgaggagtct 24562260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 5290303 - 5290341
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  5290303 tatggtaccacatgcatatttgcatttattgaggagtct 5290341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 11284005 - 11284047
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  11284005 ttatggtaccacatgcataattgcatttattgaggagtattag 11284047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 21566348 - 21566405
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtctt 259  Q
    ||||||||||| ||||||||||||||| | |||||||||||| || | |||||||||||    
T  21566348 tatggtaccacgtgcatagttgcatttatcgaggagtcttagagg-ggtgtcatgtctt 21566405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 25470851 - 25470893
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  25470851 ttatggtaccacatgcatatttgcatttattgaggagtattag 25470893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 8760408 - 8760444
Alignment:
Q  12 gaatatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||| |||||||||||||||||||||    
T  8760408 gaatatacacaagtgg-gtcagttgcataagcataaaa 8760444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 18788421 - 18788380
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    |||||||||||||| |||||||||||| | ||||||||||||    
T  18788421 tatggtaccacatgtatagttgcatttttcgaggagtcttag 18788380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 19235981 - 19236237
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  19235981 atatacactagtggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtcctggaacgccttgtcgttcaaaatgatggaacactatg 19236080  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236081 t-gttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 19236179  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  19236180 gcatagttgca-ttgttgaggagtcttagtagagttgtcatgtcttgcatgagtcttag 19236237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 14764111 - 14764372
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  14764111 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 14764202  T
Q  114 ttgttcaaaacaatgtta-tgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  14764203 ttgttcaaaacgatgttaatgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 14764302  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764303 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 14764372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 23371857 - 23372118
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  23371857 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 23371948  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  23371949 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 23372048  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23372049 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 23372118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 51300298 - 51300037
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  51300298 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacacgatg 51300207  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  51300206 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 51300107  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51300106 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 51300037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 14864984 - 14864728
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14864984 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaatgatggaacactatg 14864893  T
Q  114 ttgttcaaaacaatgtta-tgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14864892 ttgttcaaaacgatgttaatgatgaggactcatgtcctgataaaagaatgttttaaccattctataaagatgagggcttcggctctgttatggtaccaca 14864793  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  14864792 tgcatagttgcatttgttgaggagtcttagtagagttgtcatgtcctgcatgagtcttagaggtg 14864728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 17130892 - 17130637
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  17130892 atatacacaagtggagtcagatgcataagcataaaaacgatg--------aggacttcggtcctggaacgttttgtcgttcaaaacgatggaacactatg 17130801  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  17130800 ttgttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccacat 17130701  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  17130700 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 17130637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 12034328 - 12034584
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  12034328 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 12034419  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  12034420 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagggcttcggctctattatggtaccaca 12034519  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  12034520 tgcatatttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 12034584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 20249117 - 20249373
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  20249117 atatacacaagtggagtcaattgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggagcactatg 20249208  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||||    
T  20249209 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggtttcggctctgatatggtaccaca 20249308  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  20249309 tgcatggttgcatttgttgaggagtcttaatggagttgtcatgtcctgcatgagtcttagcggtg 20249373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 10390378 - 10390625
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  10390378 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 10390469  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  10390470 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgaaatggtaccaca 10390569  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  10390570 tgcataattgcattagttgaggagtcttagtagagttgtcgtgtcttgcatgagtc 10390625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 10415487 - 10415734
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  10415487 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 10415578  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  10415579 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgaaatggtaccaca 10415678  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  10415679 tgcataattgcattagttgaggagtcttagtagagttgtcgtgtcttgcatgagtc 10415734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 10422157 - 10422404
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  10422157 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 10422248  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  10422249 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgaaatggtaccaca 10422348  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  10422349 tgcataattgcattagttgaggagtcttagtagagttgtcgtgtcttgcatgagtc 10422404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 75 - 268
Target Start/End: Complemental strand, 10554016 - 10553822
Alignment:
Q  75 cctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccatt 173  Q
    |||||||||| ||||||||||||| |||| ||||| |||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10554016 cctggaacgccttgtcgttcaaaacgatggaacacgatgttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccatt 10553917  T
Q  174 ctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||| || ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  10553916 ctacaacgatgagagctttggctctgatatggtaccacatgcatagttgcatttgttgaggagtcttagtggagtcgtcatgtcatgcatgagtc 10553822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 282
Target Start/End: Original strand, 38312129 - 38312392
Alignment:
Q  13 aatatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactat 112  Q
    ||||||||||||||| ||||||||||||||||||||| || ||        ||||| ||||||||||||||| ||||||||||||  | || ||||| ||    
T  38312129 aatatacacaagtgg-gtcagttgcataagcataaaagcggtg--------aggacctcggtcctggaacgccttgtcgttcaaagcggtggaacaccat 38312219  T
Q  113 gttgtt-caaaacaatgttat-gatgaggactcatgtcctgataaaa-gaatgctttaaccattctataaagatgagagcttcggctctgttatggtacc 209  Q
    |||||| |||| |  |||||  | ||||||||||||||||||||||| ||||| |||||||||||||||| | |||| ||| |||| ||| |||||||||    
T  38312220 gttgtttcaaagcggtgttagcggtgaggactcatgtcctgataaaaagaatgttttaaccattctataacggtgagggctccggccctgatatggtacc 38312319  T
Q  210 acatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38312320 acatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 38312392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 3802551 - 3802472
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3802551 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 3802472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 29545271 - 29545394
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  29545271 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcattttttgaggagtcttagtggagttgtcatgtc 29545369  T
Q  258 ttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||    
T  29545370 ttgcatgagtcttagcggtggtgtc 29545394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 12304760 - 12304684
Alignment:
Q  206 taccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12304760 taccacatacatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 12304684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 19443666 - 19443469
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||| |||||||||||||||||||||||| || ||        ||| |||| | |||||||||| ||||||||||||  | || |||||  ||    
T  19443666 atatacacaagcggagtcagttgcataagcataaaagcggtg--------agggcttctgccctggaacgccttgtcgttcaaagcggtggaacacattg 19443575  T
Q  114 ttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    ||||||||| |  ||||  |   ||||||||||||||||||||||||||||||||||||||||||||  | |||| ||| |||| |||||||||||||||    
T  19443574 ttgttcaaagcggtgtttagcggtgaggactcatgtcctgataaaagaatgctttaaccattctatagcggtgagggctccggccctgttatggtaccac 19443475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 63 - 268
Target Start/End: Complemental strand, 18889122 - 18888914
Alignment:
Q  63 gaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgtta--tgatgaggactcatgtcctgataaaagaa 160  Q
    |||| |||||| |||||||||| ||||||||||||  | || |||||| | ||||||||| |  ||||   ||||||||||| |||||||||  ||||||    
T  18889122 gagggcttcggccctggaacgccttgtcgttcaaagcggtggaacactttattgttcaaagcggtgttcagtgatgaggacttatgtcctga--aaagaa 18889025  T
Q  161 tgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc- 257  Q
    |||||||||||||| || |  | |||| ||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||  | || ||||||||     
T  18889024 tgctttaaccattcgattagcggtgagggctccggccctgaatatggtaccacatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatgtca 18888925  T
Q  258 ttgcatgagtc 268  Q
    |||||||||||    
T  18888924 ttgcatgagtc 18888914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 18900201 - 18899980
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||| ||||||||||||||||| ||          |||| |||||| |||||||||| ||||||||||||  | || |||||| ||    
T  18900201 atatacacaagtggagtcggttgcataagcataaaagcgg---------gagggcttcggccctggaacgccttgtcgttcaaatcggtggaacactttg 18900111  T
Q  114 ttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtacc 209  Q
    ||||||||| | |||||  ||  |||||||| ||||||||| ||||  ||||||||||||||| || |  | |||| |||  ||| |||  |||||||||    
T  18900110 ttgttcaaagcgatgtttagaggtgaggacttatgtcctgaaaaaa--atgctttaaccattcgattagcggtgagggctctggccctgaatatggtacc 18900013  T
Q  210 acatgcatagttgcatttgttgaggagtcttag 242  Q
    |||||||||||||||||||||||||||||||||    
T  18900012 acatgcatagttgcatttgttgaggagtcttag 18899980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 9532866 - 9532784
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||| ||||||||| |||  || |  |||||||||||||||||||||||||||||||||    
T  9532866 ttatggtaccacatgcatagttgcatttattgaggagtattatgggggaggtcatgtcttgcatgagtcttagcggtggtgtc 9532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 30596967 - 30597076
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  30596967 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatttattgaggagtcttagtggtgttgtcatgtc 30597065  T
Q  258 ttgcatgagtc 268  Q
     ||||||||||    
T  30597066 atgcatgagtc 30597076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 54520100 - 54519987
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | || | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||| ||||||| |||||||||||    
T  54520100 gaatgctttaaccattcaaaaacggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatattttgaggagtattagtggtgttgtcatgtc 54520002  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||||||||    
T  54520001 atgcatgagtcttag 54519987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 13313919 - 13314076
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||| ||||||||||||||||||||| || ||        ||| |||| | |||||||||| ||||||||||||  | || |||||  ||    
T  13313919 atatacacaagtgg-gtcagttgcataagcataaaagcggtg--------agggcttctgccctggaacgccttgtcgttcaaagcggtggaacacattg 13314009  T
Q  114 ttgttcaaaacaatg-tta-tgatgaggactcatgtcctgataaaagaatgctttaaccattctata 178  Q
    |||||||||||  || ||| || ||||||||||||||||||||||||||| ||||||||||||||||    
T  13314010 ttgttcaaaacggtgattagtggtgaggactcatgtcctgataaaagaatactttaaccattctata 13314076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 8374033 - 8374144
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| ||||||| || |||||||||||    
T  8374033 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcatatttgcatttattgaggggtcttagaggtgttgtcatgtc 8374131  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  8374132 atgcatgagtctt 8374144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 257
Target Start/End: Complemental strand, 18914151 - 18913966
Alignment:
Q  73 gtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgtt-atgatgaggactcatgtcctgataaaagaatgctttaacca 171  Q
    |||||||||| | |||||||||||| || || |||||| ||||||||||| |  |||| | |  || |||| |||||||||  || ||||||||||||||    
T  18914151 gtcctggaacaccttgtcgttcaaagtggtggaacactttgttgttcaaagcggtgtttagggagatgacttatgtcctga--aatgaatgctttaacca 18914054  T
Q  172 ttctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||| || |  | |||| ||||||||  ||  ||||||||||||||||||||||||||||| |||||||||||| || |||||||||||    
T  18914053 ttcaattagcggtgagggcttcggccttgaatatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgtc 18913966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 31690691 - 31690796
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||  | |||| |||||||| |||  |||||||||||||||||| |||||||| ||||    
T  31690691 tgaggactcatgtcctga-aaaagaatgctttaaccattcgattagcggtgagggcttcggccctgaatatggtaccacatgcatatttgcatttattga 31690789  T
Q  233 ggagtct 239  Q
    |||||||    
T  31690790 ggagtct 31690796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 17243775 - 17243897
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||| |||||||||  |||||||||||||||||||| | ||  | |||| ||| || | |||  ||||||||||||||||||||||||||||| ||    
T  17243775 tgaggacttatgtcctga--aaagaatgctttaaccattcgactagcggtgagggctccgaccctgaatatggtaccacatgcatagttgcatttgtcga 17243872  T
Q  233 ggagtcttagtggagttgtcatgtc 257  Q
    |||||||||| || |||||||||||    
T  17243873 ggagtcttagaggtgttgtcatgtc 17243897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 16833275 - 16833165
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | || | |||| |||||||  ||||| ||| |||||||||||| |||||| | ||||||||||||||||| || ||||||||    
T  16833275 gaatgctttaaccattcaaaaacggtgagggcttcggtcctgtt-tggcaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtc 16833178  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  16833177 atgcatgagtctt 16833165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 15374694 - 15374627
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    ||||||||||||||||  ||||||| ||||||||||||||||| || |||||||| ||||||||||||    
T  15374694 tggtaccacatgcatatctgcatttattgaggagtcttagtggtgtcgtcatgtcatgcatgagtctt 15374627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 23174174 - 23174119
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||||||||||||||||||| |||||||||||| || |||||||||||    
T  23174174 atggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgtc 23174119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 178
Target Start/End: Original strand, 13303282 - 13303400
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatg-ttat-gatgaggactcatgtcctgataaaaga 159  Q
    ||||| |||| | |||||||||| ||||||||||||  | || |||||  |||||||||||||  || |||  | |||||||||||||||||||||||||    
T  13303282 tgagggcttctgccctggaacgccttgtcgttcaaagcggtggaacacattgttgttcaaaacggtgattagcggtgaggactcatgtcctgataaaaga 13303381  T
Q  160 atgctttaaccattctata 178  Q
    || ||||||||||||||||    
T  13303382 atactttaaccattctata 13303400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 29550977 - 29550869
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||| || ||||||||    
T  29550977 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtc 29550880  T
Q  258 ttgcatgagtc 268  Q
     ||||||||||    
T  29550879 atgcatgagtc 29550869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 217
Target Start/End: Original strand, 18719161 - 18719312
Alignment:
Q  69 ttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgcttt 166  Q
    ||||| |||||||||| || |||||||||  | || |||||| ||||||||||| |  ||||  |   |||||||||||||||||| |||||||||||||    
T  18719161 ttcggccctggaacgccttctcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggactcatgtcctga-aaaagaatgcttt 18719259  T
Q  167 aaccattctataa-agatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||  | |||| |||||||| ||| ||||||||||||||||||    
T  18719260 aaccattcgataagcggtgagggcttcggccctgattatggtaccacatgcat 18719312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 14289150 - 14289206
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14289150 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 14289206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 32388125 - 32388236
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||| ||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| ||  |||||||    
T  32388125 gaatgctttaaccattcaaaagcggtgagggctttggtcctgtt-tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcatcatgtc 32388223  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  32388224 atgcatgagtctt 32388236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 49163208 - 49163098
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||| |||||||| | |  | ||||||||||||  ||||| |||||||||||||||| |||||||  |||||| |||||||||| || ||||||||    
T  49163208 gaatgcttgaaccattcaaaagcggtgagagcttcggtcctgtt-tggtaccacatgcataattgcatta-ttgaggggtcttagtggtgtcgtcatgtc 49163111  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  49163110 atgcatgagtctt 49163098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 13324945 - 13324988
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctata 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  13324945 tgaggactcatgtcctgataaaagaatgctttaatcattctata 13324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 27029588 - 27029654
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  27029588 tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtcatgcatgagtctt 27029654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 27031756 - 27031822
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  27031756 tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtcatgcatgagtctt 27031822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 54091845 - 54091911
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  54091845 tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtcatgcatgagtctt 54091911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 18957777 - 18957715
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatga 265  Q
    |||||||||||||||| |||||||| |||||| |||||||||| || |||||||| |||||||    
T  18957777 tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtcatgcatga 18957715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 9691516 - 9691626
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||| | |||||||||||||||| |||||| | ||||||||||||||||| || || |||||    
T  9691516 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgat-tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgttatgtc 9691613  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  9691614 atgcatgagtctt 9691626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 10597881 - 10597933
Alignment:
Q  188 gcttcggctctg-ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  10597881 gcttcggccctgattatggtaccacatgcatatttgcatttgttgaggagtct 10597933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 11956704 - 11956814
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| || |||||||||||||  ||||||  |||||| |||||||||| |||||||||||    
T  11956704 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tgttaccacatgcatatctgcatta-ttgaggggtcttagtggtgttgtcatgtc 11956801  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  11956802 atgcatgagtctt 11956814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 42109118 - 42109062
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||    
T  42109118 tgcatagtcgcagttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 42109062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 46071219 - 46071329
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  ||| || |||||||  ||||| |||||||||||||||| |||||| | | ||||||||||||| | || ||||||||    
T  46071219 gaatgctttaaccattcaaaagcgataagggcttcggtcctgtt-tggtaccacatgcataattgcatatct-gaggagtcttagtagtgtcgtcatgtc 46071316  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  46071317 atgcatgagtctt 46071329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 12355952 - 12355987
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  12355952 atatacacaagtggagtcagttgcataagcataaaa 12355987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 12362501 - 12362536
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  12362501 atatacacaagtggagtcagttgcataagcataaaa 12362536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 17190850 - 17190811
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  17190850 tggtaccacatgcatagttgcatttattgaggagtcttag 17190811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 17496317 - 17496282
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  17496317 atatacacaagtggagtcagttgcataagcataaaa 17496282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 34852304 - 34852414
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| ||||||||| ||| ||||||||||||||||||| || | |||| ||| |||| |||  |||||||||||||||||    ||| ||||||||    
T  34852304 tgaggacttatgtcctga-aaatgaatgctttaaccattctacaacggtgagggctacggccctgaatatggtaccacatgcat--gcgca-ttgttgag 34852399  T
Q  234 gagtcttagtggagt 248  Q
    |||||||||||||||    
T  34852400 gagtcttagtggagt 34852414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 265
Target Start/End: Complemental strand, 14292786 - 14292657
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgtt-ga 232  Q
    |||||||| ||||||| | ||| ||||||||||||||||||| |  | |||| |||||||| ||| ||||||||||||||| || | ||   ||||| ||    
T  14292786 tgaggacttatgtcctaaaaaatgaatgctttaaccattctacagcggtgagggcttcggccctgattatggtaccacatgtatggatg---ttgttaga 14292690  T
Q  233 ggagtcttagtggagttgtcatgtcttgcatga 265  Q
    |||||||||||||||| || |||| | ||||||    
T  14292689 ggagtcttagtggagtggtgatgtgtcgcatga 14292657  T

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Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 17157074 - 17157036
Alignment:
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17157074 ggtaccacatgcatagttgcatttattgaggagtcttag 17157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 24191775 - 24191737
Alignment:
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  24191775 ggtaccacatgcatagttgcatttattgaggagtcttag 24191737  T

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Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 13342712 - 13342671
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||| |||||||||||||||||||||||| |||||||||||    
T  13342712 atagtcgcatttgttgaggagtcttagtggtgttgtcatgtc 13342671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 16331702 - 16331811
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||  |||||||||||||||| |||||| |  |||||||||||||||| || ||||||||    
T  16331702 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtc-tggtaccacatgcataattgcatat--tgaggagtcttagtggtgtcgtcatgtc 16331798  T
Q  258 ttgcatgagtctt 270  Q
     ||||||| ||||    
T  16331799 atgcatgactctt 16331811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 16802610 - 16802651
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  16802610 tatggtaccacatgcatagttgcatttatcgaggagtcttag 16802651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 48774727 - 48774807
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | ||||||||||||  ||||| |||||||||||||||| |||||| | |||||||||||    
T  48774727 gaatgctttaaccattcaaaagcggtgagagcttcggtcctgtt-tggtaccacatgcatatttgcatctattgaggagtct 48774807  T

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Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 2270240 - 2270276
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaa 50  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2270240 atatacacaagtggagtcagtttcataagcataaaaa 2270276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 11644798 - 11644830
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  11644798 atatacacaagtggagtcagttgcataagcata 11644830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 11850780 - 11850860
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    ||||||||||||||||||| |  | |||| ||| |||| |||  |||||||||||||||||| |||||||| |||||||||    
T  11850780 gaatgctttaaccattctacagcggtgagggctacggccctgaatatggtaccacatgcataattgcatttattgaggagt 11850860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 12255216 - 12255133
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||  | ||||  ||||||| ||| ||||||||||||||||||    
T  12255216 tgaggactcatgtcctga-aaaagaatgctttaaccattcgattagcggtgaggtcttcggccctgattatggtaccacatgcat 12255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 13692119 - 13692087
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  13692119 atatacacaagtggagtcagttgcataagcata 13692087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 17512530 - 17512490
Alignment:
Q  217 tagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  17512530 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtc 17512490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 46723597 - 46723637
Alignment:
Q  217 tagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  46723597 tagttgcatttgtcgaggagtcttagtggtgttgtcatgtc 46723637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 8583454 - 8583493
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  8583454 ttatggtaccacatgcatatttgcatttattgaggagtct 8583493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 12479687 - 12479722
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  12479687 atatacacaagtggagtcagttgcataagcacaaaa 12479722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 14084548 - 14084509
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  14084548 ttatggtaccacatgcatatttgcatttattgaggagtct 14084509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 14089949 - 14089910
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  14089949 ttatggtaccacatgcatatttgcatttattgaggagtct 14089910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 14544286 - 14544368
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||| ||||||||||||||||||||| | || | |||| ||| |||  ||| ||||||||||||||||||    
T  14544286 tgaggacttatgtcctga-aaaagaatgctttaaccattcgacaacggtgagggctacggtcctgattatggtaccacatgcat 14544368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 15518691 - 15518656
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  15518691 atatacacaagtggagtcagttgcataagcacaaaa 15518656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 45
Target Start/End: Original strand, 18136298 - 18136329
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcat 45  Q
    ||||||||||||||||||||||||||||||||    
T  18136298 atatacacaagtggagtcagttgcataagcat 18136329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 19344261 - 19344370
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||| |||| | |  | |||| |||||||  ||||| |||||||||||||||| ||| || | ||||||||||||||||| ||  |||||||    
T  19344261 gaatgctttaactattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattggatat-ttgaggagtcttagtggtgtcatcatgtc 19344358  T
Q  258 ttgcatgagtct 269  Q
     |||||||||||    
T  19344359 atgcatgagtct 19344370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 20377393 - 20377459
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | | ||||||||||||| | || |||||||| ||||||||||||    
T  20377393 tggtaccacatgcataattgcatatct-gaggagtcttagtagtgtcgtcatgtcatgcatgagtctt 20377459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 49399490 - 49399451
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  49399490 ttatggtaccacatgcatatttgcatttattgaggagtct 49399451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 41456308 - 41456350
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  41456308 ttatggtaccacatgcataattgcatttattgaggagtattag 41456350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 12202478 - 12202446
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||| ||||    
T  12202478 atatacacaagtggagtcagttgcataaacata 12202446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 13968993 - 13969029
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggag 236  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  13968993 ttatggtaccacatgcatatttgcatttattgaggag 13969029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 13974468 - 13974504
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggag 236  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  13974468 ttatggtaccacatgcatatttgcatttattgaggag 13974504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 20187707 - 20187671
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||| |||||||| |||||||||||    
T  20187707 tggtaccacatgcatatttgcatttattgaggagtct 20187671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 24284634 - 24284689
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgt-cttgcatgagtc 268  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||  |||||||||||    
T  24284634 tgcatagtcgcatt-gttgaggagtcttagtggtgttgtcatgtagttgcatgagtc 24284689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 29182024 - 29182288
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaat-gatgaaacactat 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||    
T  29182024 atatacacaagtggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtcctgaaacgctttgtcgttcaaaaacgatggaacactat 29182123  T
Q  113 gttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  29182124 gttgttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagggcttcggccctgttatggtaccaca 29182223  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  29182224 tgcatagttgcaattgttgaggagtcttagtagagttgtcatgtcctgcatgagtcttagaggtg 29182288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 16090225 - 16089961
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaat-gatgaaacactat 112  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||    
T  16090225 atatacacaagtggagtcagttgcataagcataaaaatgatgttatgatgaggacttcggtcttggaacgctttgtcgttcaaaaacgatggaacactat 16090126  T
Q  113 gttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  16090125 gttgttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatggtttaaccattctataaaggtgagggcttcggctctgttatggtaccaca 16090026  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  16090025 tgcatagttgcaattgttgaggagtcttagtagagttgtcatgtcctgcatgagtcttagaggtg 16089961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 18872062 - 18871801
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  18872062 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 18871971  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  18871970 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 18871871  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871870 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 18871801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 10897165 - 10897420
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  10897165 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 10897256  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacat 213  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10897257 ttgttcaaaacgatgttatgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagggcttcggctctgttatggtaccacat 10897356  T
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||    
T  10897357 gcatagttgcatttgttgagaagtcttagtagagttgtcatgtcctgcatgagtcttagaggtg 10897420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 15166971 - 15166709
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  15166971 atatacacaagtggagtcagttgcataagcataaaaa-------acgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 15166879  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  15166878 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 15166779  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15166778 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcgatggtgtc 15166709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 2966127 - 2965871
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  2966127 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaacgatggaacactatg 2966036  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  2966035 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccaca 2965936  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  2965935 tgcatagttgcatttgttgaggagtcttagtggggttgtcatgtcctgcatgagtcttagaggtg 2965871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 20907341 - 20907597
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  20907341 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgccttgtcgttcaaaacgatggaacactatg 20907432  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||    
T  20907433 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcgactctgatatggtaccaca 20907532  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  20907533 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttaacggtg 20907597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 16008280 - 16008024
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||| |||| | |||||||    
T  16008280 atatatacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgccttgtcgttcaaaacgatggagcactatg 16008189  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  16008188 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 16008089  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16008088 tgcatggttgcatttgttgaggagtcttagtggagttgtcatgtcctacatgagtcttagcggtg 16008024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 2464508 - 2464258
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  2464508 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 2464417  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  2464416 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaa-gaatgctttaaccattctataacgatgagagcttcgactctgatatggtaccaca 2464318  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  2464317 tgcataattgcatttgttgaggagtcttagaagagttgtcatgtcttgcatgagtcttag 2464258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 3858337 - 3858586
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  3858337 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 3858428  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  3858429 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaa-gaatgctttaaccattctataacgatgagagcttcggctctgatatggtaccaca 3858527  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctta 271  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  3858528 tgcataattgcatttgttgaggagtcttagaagagttgtcatgtcttgcatgagtctta 3858586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 147264 - 147002
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||        ||||| ||||||||||||||| ||||||||||||  | || |||||||||    
T  147264 atatacacaagtggagtcagttgcataagcataaaaacggtg--------aggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatg 147173  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaa-gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    ||||||||| |  |||||  | ||||||||||||||||||||||| |||||||||||||||||||||| | |||| |||||||||||| |||||||||||    
T  147172 ttgttcaaagcggtgttaacggtgaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggcttcggctctgatatggtaccac 147073  T
Q  212 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  147072 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 147002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 14320546 - 14320802
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||        ||||| ||||||||||||||| ||||||||||||  |||| |||||||||    
T  14320546 atatacacaagtggagtcagttgcataagcataaaaacggtg--------aggacctcggtcctggaacgccttgtcgttcaaagcgatggaacactatg 14320637  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgat-aaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||| |  |||||    |||||||||||||||||| |||||||||||||||||||||||||| | |||| ||| |||| ||| ||||||||||||    
T  14320638 ttgttcaaagcggtgttaatgggaggactcatgtcctgatgaaaagaatgctttaaccattctataacggtgagggctccggccctgatatggtaccaca 14320737  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  14320738 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagtggtg 14320802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 14565904 - 14565643
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||| |||||||||||||||||||| ||        ||||| ||||||||||||||| ||||||||||||  | || |||||||||    
T  14565904 atatacacaagtggagtc-gttgcataagcataaaaacggtg--------aggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatg 14565814  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaa--gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    ||||||||| |  |||||    ||||||||||||||||||||||  |||||||||||||||||||||| | |||| |||||||||||| |||||||||||    
T  14565813 ttgttcaaagcggtgttaatgggaggactcatgtcctgataaaaaagaatgctttaaccattctataacggtgagggcttcggctctgatatggtaccac 14565714  T
Q  212 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  14565713 atgcatagttgcatttgttgaggagtcttagtagagttgtcatgtcctgcatgagtcttagcggtggtgtc 14565643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 62 - 270
Target Start/End: Complemental strand, 31154523 - 31154314
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgata-aaagaa 160  Q
    ||||||| ||||||||||||||| ||||||||||||  | || |||||||||||||||||| |  || ||    ||||||||||||||||||| ||||||    
T  31154523 tgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgataatgggaggactcatgtcctgatataaagaa 31154424  T
Q  161 tgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 260  Q
    ||||||||||||||||||| | |||| || ||||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||    
T  31154423 tgctttaaccattctataacggtgagggcctcggccctgatatggtaccacatgcatagttgcatttgtcgaggagtcttagaggagtcgtcatgtcatg 31154324  T
Q  261 catgagtctt 270  Q
    ||||||||||    
T  31154323 catgagtctt 31154314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 23665990 - 23666069
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23665990 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 23666069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 29795744 - 29795665
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29795744 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 29795665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 29799563 - 29799484
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29799563 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 29799484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 282
Target Start/End: Complemental strand, 11302933 - 11302787
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| |||||||||| |  ||||||||||||||||| | |||| || | |   |||| ||| || |||||||||||||||||||||||||||||||    
T  11302933 tgaggacttatgtcctgatga--gaatgctttaaccattcgacaaaggtgtgggtcacggccctgattttggtaccacatgcatagttgcatttgttgag 11302836  T
Q  234 gagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11302835 gagtcttagtggagttttcatgtcttgcatgagtcttagcggtggtgtc 11302787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 14421371 - 14421289
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||| ||||||||| |||| || |  |||||||||||||||||||||||||||||||||    
T  14421371 ttatggtaccacatgcatagttgcatttattgaggagtattaggggggaggtcatgtcttgcatgagtcttagcggtggtgtc 14421289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 14266165 - 14266232
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14266165 atggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 14266232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 19145581 - 19145514
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  19145581 atggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 19145514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 20744980 - 20744913
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  20744980 atggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 20744913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 13678343 - 13678230
Alignment:
Q  158 gaatgctttaaccattctataa-agatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatg 255  Q
    ||||||||||||||||| || | || |||| |||||||| |||  ||||||||||||||||||||||||||||||||||||||||||  | || ||||||    
T  13678343 gaatgctttaaccattcaattagaggtgagggcttcggccctgaatatggtaccacatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatg 13678244  T
Q  256 tc-ttgcatgagtc 268  Q
    || |||||||||||    
T  13678243 tcattgcatgagtc 13678230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 13019766 - 13019655
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | ||||||||||||  ||||| |||||||||||||||| |||||||| |||||| ||||||||||  | ||||||||    
T  13019766 gaatgctttaaccattcaaaagcggtgagagcttcggtcctgtt-tggtaccacatgcataattgcatttattgaggggtcttagtggtatcgtcatgtc 13019668  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  13019667 atgcatgagtctt 13019655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 14255889 - 14255956
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatg-tcttgcatgagtc 268  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||| | |||||||||||    
T  14255889 atggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgttattgcatgagtc 14255956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 255
Target Start/End: Original strand, 21232129 - 21232248
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| ||||||||| ||| |||||||||||||||||  ||  |  ||| |||||||| |||  ||||||||||||||||||||||||||||| |||    
T  21232129 tgaggacttatgtcctga-aaatgaatgctttaaccattcattagcgg-gagggcttcggccctgaatatggtaccacatgcatagttgcatttgtcgag 21232226  T
Q  234 gagtcttagtggagttgtcatg 255  Q
    ||||||||| || |||||||||    
T  21232227 gagtcttagaggtgttgtcatg 21232248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 19439370 - 19439259
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| || ||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  19439370 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tgataccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 19439272  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  19439271 atgcatgagtctt 19439259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 46624855 - 46624790
Alignment:
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||| ||||| |||||||||||    
T  46624855 ggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgttgtgatgtcattgcatgagtc 46624790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 20328344 - 20328465
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| |||||||||  |||||||||||||||||||| | |  | || | ||| |||  |||| |||||||||||||||||||| |||||||| |||    
T  20328344 tgaggacttatgtcctga--aaagaatgctttaaccattcgacagcggtgtgggctacggtcctgtatatggtaccacatgcatagtagcatttgtcgag 20328441  T
Q  234 gagtcttagtggagttgtcatgtc 257  Q
    | ||||||| || |||||||||||    
T  20328442 gggtcttagaggtgttgtcatgtc 20328465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 11384000 - 11384043
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtgg 245  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  11384000 atggtaccacatgcatagttgcatttgtcgaggagtcttagtgg 11384043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 11390488 - 11390531
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtgg 245  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  11390488 atggtaccacatgcatagttgcatttgtcgaggagtcttagtgg 11390531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 16843984 - 16844093
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| | |||||| |||||||||||||| || || ||||||||    
T  16843984 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataat-gcatttattgaggagtcttaggggtgtcgtcatgtc 16844081  T
Q  258 ttgcatgagtct 269  Q
     |||||||||||    
T  16844082 atgcatgagtct 16844093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 18606881 - 18606814
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||||| |||||||||||||||||||||||  | || |||||||| |||||||||||    
T  18606881 atggtaccacatgcataattgcatttgttgaggagtcttagaagtgtcgtcatgtcattgcatgagtc 18606814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 19151883 - 19151816
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||||  |||||||| |||||||||||||| |||||| |||| |||||||||||    
T  19151883 atggtaccacatgcatagtcacatttgttaaggagtcttagtggtgttgtcgtgtcattgcatgagtc 19151816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 20751282 - 20751215
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||||  |||||||| |||||||||||||| |||||| |||| |||||||||||    
T  20751282 atggtaccacatgcatagtcacatttgttaaggagtcttagtggtgttgtcgtgtcattgcatgagtc 20751215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 11220134 - 11220290
Alignment:
Q  63 gaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaa 160  Q
    |||| |||||| |||||||||| ||||||||||||  | || ||||||| |||||||||| |  ||||| |   |||||||| ||||||||| ||| |||    
T  11220134 gagggcttcggccctggaacgccttgtcgttcaaagcggtggaacacta-gttgttcaaagcggtgttaagcggtgaggacttatgtcctga-aaatgaa 11220231  T
Q  161 tgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||||||||| | ||  | |||| |||||||| ||| ||||||||||||||||||    
T  11220232 tgctttaaccattcaaatagcggtgagggcttcggccctgattatggtaccacatgcat 11220290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 37244403 - 37244506
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaaga--tgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttg 231  Q
    |||||||| ||||||||||    ||||||||||||||||| | | ||   |||| |||||||| ||| ||||||||||||||||||| |||||||| |||    
T  37244403 tgaggacttatgtcctgat----gaatgctttaaccattcaaaacagcggtgagggcttcggccctgattatggtaccacatgcatatttgcatttattg 37244498  T
Q  232 aggagtct 239  Q
    ||||||||    
T  37244499 aggagtct 37244506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 46348731 - 46348766
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  46348731 atatacacaagtggagtcagttgcataagcataaaa 46348766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 3327816 - 3327778
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3327816 tatggtaccacatgcatatttgcatttgttgaggagtct 3327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 32771511 - 32771473
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  32771511 tatggtaccacatgcatatttgcatttgttgaggagtct 32771473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 13006323 - 13006286
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||||||||||||||||||||||||||| |||||||||    
T  13006323 ttatggtaccacatgcatagttgcatttattgaggagt 13006286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 16575613 - 16575666
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  16575613 atagtcgcatttgttgaggagtcatagtggtgttgtcatgtcattgcatgagtc 16575666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 16590049 - 16589996
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  16590049 atagtcgcatttgttgaggagtcatagtggtgttgtcatgtcattgcatgagtc 16589996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 16676208 - 16676167
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  16676208 tatggtaccacatgcatagttgcatttatcgaggagtcttag 16676167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 17650445 - 17650404
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  17650445 tatggtaccacatgcatagttgcatttatcgaggagtcttag 17650404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 6411963 - 6411821
Alignment:
Q  76 ctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgt-tat-gatgaggactcatgtcctgataaaagaatgctttaaccatt 173  Q
    ||||||||| ||||||||||||  | || ||||||| |||||||||| || ||| ||  | |||||||| ||||||||| ||| |||||||||||| |||    
T  6411963 ctggaacgcattgtcgttcaaagcggtggaacacta-gttgttcaaagcagtgtatagcggtgaggacttatgtcctga-aaatgaatgctttaacaatt 6411866  T
Q  174 ctataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    ||| |  | |||| |||||||| ||| ||||||||||||||||||    
T  6411865 ctacagcggtgagggcttcggccctgattatggtaccacatgcat 6411821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 11857681 - 11857713
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  11857681 atatacacaagtggagtcagttgcataagcata 11857713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 14178986 - 14179018
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  14178986 atatacacaagtggagtcagttgcataagcata 14179018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 15104319 - 15104351
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  15104319 atatacacaagtggagtcagttgcataagcata 15104351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 23521060 - 23520950
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  || || ||||||||||||||||  ||||||  |||||| |||||||||  |||||||||||    
T  23521060 gaatgctttaaccattcaaaagcggtgagggcttcggtcctatt-tggtaccacatgcatatctgcatta-ttgaggggtcttagtgatgttgtcatgtc 23520963  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  23520962 atgcatgagtctt 23520950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 36306130 - 36306233
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcgg-ctctgttatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||  | |||| ||||||| ||    |||||||||||||||||| |||||||  ||||    
T  36306130 tgaggactcatgtcctga-aaaagaatgctttaaccattcgactagtggtgagggcttcggtcttgaatatggtaccacatgcatatttgcattatttga 36306228  T
Q  233 ggagt 237  Q
    |||||    
T  36306229 ggagt 36306233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 46625046 - 46625014
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  46625046 atatacacaagtggagtcagttgcataagcata 46625014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 46682169 - 46682201
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  46682169 atatacacaagtggagtcagttgcataagcata 46682201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 832963 - 832998
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||||| |||||||    
T  832963 atatacacaagtggagtcagttgcataatcataaaa 832998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 837006 - 837041
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||||| |||||||    
T  837006 atatacacaagtggagtcagttgcataatcataaaa 837041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 1198143 - 1198178
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||||| |||||||    
T  1198143 atatacacaagtggagtcagttgcataatcataaaa 1198178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 1202186 - 1202221
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||||| |||||||    
T  1202186 atatacacaagtggagtcagttgcataatcataaaa 1202221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 1612817 - 1612782
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||| ||||||||||||    
T  1612817 atatacacaagtggagtcagttggataagcataaaa 1612782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 3289762 - 3289797
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||||| |||||||    
T  3289762 atatacacaagtggagtcagttgcataatcataaaa 3289797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 3327998 - 3327963
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||| |||||||||||||||||||||||    
T  3327998 atatacacaagtagagtcagttgcataagcataaaa 3327963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 4279980 - 4279941
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  4279980 ttatggtaccacatgcatatttgcatttattgaggagtct 4279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 12461576 - 12461467
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| |    | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||| ||| ||  |||||||    
T  12461576 gaatgctttaaccattcaaatgcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat-ttgaggagtcttaatggtgtcatcatgtc 12461479  T
Q  258 ttgcatgagtct 269  Q
     |||||||||||    
T  12461478 atgcatgagtct 12461467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 16187705 - 16187740
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16187705 atatacacaagtggagtcagttgcataagcacaaaa 16187740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 19616312 - 19616273
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  19616312 ttatggtaccacatgcatatttgcatttattgaggagtct 19616273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 12711060 - 12711102
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  12711060 ttatggtaccacatgcatatttgcatttattgaggagtattag 12711102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 13124131 - 13124173
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  13124131 ttatggtaccacatgcatatttgcatttattgaggagtattag 13124173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 12591795 - 12591832
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  12591795 ttatggtaccacatgcatatttgcatttattgaggagt 12591832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 18958570 - 18958627
Alignment:
Q  183 tgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||| |||||||| ||| ||||||||||||||||||| |||||||| ||||| |||||    
T  18958570 tgagggcttcggccctgattatggtaccacatgcatatttgcatttattgagaagtct 18958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 23442254 - 23442201
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||| ||||||| |||||| ||||||||| ||||||||||| |||||||||||    
T  23442254 atagtcgcatttgatgaggactcttagtggtgttgtcatgtcattgcatgagtc 23442201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 46174383 - 46174303
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| | |||||  ||||| |||||||||||||||| |||||||| |||||||||||    
T  46174383 gaatgctttaaccattcaaaagcggtgagggtttcggtcctgtt-tggtaccacatgcatatttgcatttattgaggagtct 46174303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 10520035 - 10520003
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||| |||||||||||||||||||||||||    
T  10520035 atatacataagtggagtcagttgcataagcata 10520003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 11308985 - 11308933
Alignment:
Q  217 tagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||| |||||||||| |||| ||||||||| | |||||||||||    
T  11308985 tagttgcatttgtcgaggagtcttggtggtgttgtcatgccattgcatgagtc 11308933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 11312293 - 11312241
Alignment:
Q  217 tagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||| |||||||||| |||| ||||||||| | |||||||||||    
T  11312293 tagttgcatttgtcgaggagtcttggtggtgttgtcatgccattgcatgagtc 11312241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 12547371 - 12547339
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||| ||||||||||    
T  12547371 atatacacaagtggagtcagttccataagcata 12547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 14945937 - 14946020
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| |||||||| |||| |||||||||||||||||||| |  | |||| ||| |||| ||| ||||||||||||||||||    
T  14945937 tgaggacttatgtcctg-taaatgaatgctttaaccattctattagcggtgagggctccggccctgattatggtaccacatgcat 14946020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 15097942 - 15097974
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||| |||||||||||||||||||    
T  15097942 atatacacaagtgaagtcagttgcataagcata 15097974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 15373530 - 15373613
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| |||||||| |||| |||||||||||||||||||| |  | |||| ||| |||| ||| ||||||||||||||||||    
T  15373530 tgaggacttatgtcctg-taaatgaatgctttaaccattctattagcggtgagggctccggccctgattatggtaccacatgcat 15373613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 30271898 - 30271961
Alignment:
Q  206 taccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||  ||||||  | |||| |||||||||| ||||||||||| ||||||||||||    
T  30271898 taccacatgcataactgcatta-tcgaggggtcttagtggtgttgtcatgtcatgcatgagtctt 30271961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 2830 - 3091
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  2830 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 2921  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  2922 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 3021  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3022 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 3091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 205; Significance: 1e-112; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 110389 - 110128
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  110389 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 110298  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  110297 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 110198  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  110197 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 110128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 268
Target Start/End: Original strand, 124505 - 124697
Alignment:
Q  75 cctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccat 172  Q
    |||||||||| |||||||||||| || || ||||||| |||||||||| |  ||||  |   |||||||||||||||||| |||||||||||||||||||    
T  124505 cctggaacgccttgtcgttcaaagtggtggaacacta-gttgttcaaagcggtgtttagcggtgaggactcatgtcctga-aaaagaatgctttaaccat 124602  T
Q  173 tctataa-agatgagagcttcggctctg-ttatggtaccacatgcat-agttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    || ||||  | |||| |||||||| ||| |||||||||||||||||| |||     |||| |||||||||||||||||| ||  ||| |||||||||||    
T  124603 tcgataagcggtgagggcttcggccctgattatggtaccacatgcatgagt----attgtagaggagtcttagtggagtggttgtgtgttgcatgagtc 124697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 13037 - 13079
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    |||||||||||||||||||||||||||| | ||||||| ||||    
T  13037 ttatggtaccacatgcatagttgcatttatcgaggagtattag 13079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 142646 - 142605
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtg 244  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  142646 atggtaccacatgcatagtcgca-ttgttgaggagtcttagtg 142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 19662805 - 19663066
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  19662805 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 19662896  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  19662897 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 19662996  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19662997 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 19663066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 29281137 - 29280881
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  29281137 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 29281046  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  29281045 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagggcttcggctctgatatggtaccaca 29280946  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29280945 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagaggtg 29280881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 9718 - 9461
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  9718 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 9627  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  9626 ttgttcaaaatgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccaca 9527  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtgg 278  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  9526 tgcatagttgcattttttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtgg 9461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 27210960 - 27211216
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||        ||||| |||||||| |||||| ||||||||||||  | || |||||||||    
T  27210960 atatacacaagtggagtcagttgcataagcataaaaacggtg--------aggacctcggtcctagaacgccttgtcgttcaaagcggtggaacactatg 27211051  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgat-aaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||| |  |||||    |||||||||||||||||| ||||||||| |||||||||||||||| | |||| ||| |||| ||| ||||||||||||    
T  27211052 ttgttcaaagcggtgttaatgggaggactcatgtcctgatgaaaagaatgttttaaccattctataacggtgagggctccggccctgatatggtaccaca 27211151  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27211152 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagcggtg 27211216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 26884348 - 26884092
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||| |||||||||||||||        || ||||||| ||||||||||||||| ||||||||||||  | || |||||||||    
T  26884348 atatacacaagtggagtcagt-gcataagcataaaaa--------tggtgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatg 26884258  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgataaaa-gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||| |  |||||    |||||||||||||||||||||| |||||||||||||||||||||| | |||| ||  |||| ||| ||||||||||||    
T  26884257 ttgttcaaagcggtgttaatgggaggactcatgtcctgataaaaagaatgctttaaccattctataacggtgagggccccggccctgatatggtaccaca 26884158  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtgg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  26884157 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagtggtgg 26884092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 62 - 277
Target Start/End: Original strand, 6261567 - 6261783
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgat-aaaagaa 160  Q
    ||||||| ||||||||||||||| ||||||||||||  | || ||||||| |||||||||| |  |||||    |||||||||||||||||| |||||||    
T  6261567 tgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactaagttgttcaaagcggtgttaatgggaggactcatgtcctgatgaaaagaa 6261666  T
Q  161 tgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 260  Q
    ||||||||||||||||||| | |||| | |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||    
T  6261667 tgctttaaccattctataacggtgagggtttcggctctgatatggtaccacatgcatagttgcatttgttgaggagttttagtagagttgtcatgtcctg 6261766  T
Q  261 catgagtcttagcggtg 277  Q
    |||||||||||| ||||    
T  6261767 catgagtcttagaggtg 6261783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 25181813 - 25181969
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  25181813 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 25181904  T
Q  114 ttgttcaaaacaatgtt-atgatgaggactcatgtcctgataaaagaatgctttaaccattctat 177  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  25181905 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctat 25181969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 9241350 - 9241268
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9241350 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 9241268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 282
Target Start/End: Original strand, 10685787 - 10685866
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10685787 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 10685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 20260838 - 20260759
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20260838 tggtaccacatgcatagttgcttttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 20260759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 21907444 - 21907196
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||  |          |||| |||||| |||||||||| ||||||||||||  | || |||||| ||    
T  21907444 atatacacaagtggagtcagttgcataagcataaaagtgg---------gagggcttcggccctggaacgccttgtcgttcaaagcggtggaacactttg 21907354  T
Q  114 ttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtacc 209  Q
    ||||||||| |  |||| ||   |||||||| |||||||||  |||||||| ||||||||||| || |  | |||| ||| |||| |||  |||||||||    
T  21907353 ttgttcaaagcggtgttttgcggtgaggacttatgtcctga--aaagaatgttttaaccattcgattagcggtgagggctccggccctgaatatggtacc 21907256  T
Q  210 acatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||| |||||||||||    
T  21907255 acatgcatagttgcatttgtcgaggagtcttagaggtgttgtcatgtcattgcatgagtc 21907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 27208625 - 27208783
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||        ||||| |||||||| |||||| ||||||||||||  | || |||||||||    
T  27208625 atatacacaagtggagtcagttgcataagcataaaaacggtg--------aggacctcggtcctagaacgccttgtcgttcaaagcggtggaacactatg 27208716  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgat-aaaagaatgctttaaccattctataa 179  Q
    ||||||||| |  |||||    |||||||||||||||||| ||||||||| ||||||||||||||||    
T  27208717 ttgttcaaagcggtgttaatgggaggactcatgtcctgatgaaaagaatgttttaaccattctataa 27208783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 15643368 - 15643477
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | | || |||| |||||||  ||||| |||||||||||||||| |||||||| ||||||||||||||||| || ||||||||    
T  15643368 gaatgctttaaccattcaaaagaggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatttattgaggagtcttagtggtgtcgtcatgtc 15643466  T
Q  258 ttgcatgagtc 268  Q
     ||||||||||    
T  15643467 atgcatgagtc 15643477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 23264177 - 23263931
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||| ||||||||| ||||||||||||||||| ||          |||| |||||| |||||||||| ||||||||||||  | || ||||||| |    
T  23264177 atatacaccagtggagtctgttgcataagcataaaagcgg---------gagggcttcggccctggaacgccttgtcgttcaaagcggtggaacacta-g 23264088  T
Q  114 ttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtacca 210  Q
    ||||||||| |  ||||  |   |||||||| |||||||||  |||||||||||||| ||||| |||  | |||| ||| |||| |||  ||||||||||    
T  23264087 ttgttcaaagcggtgtttagcggtgaggacttatgtcctga--aaagaatgctttaatcattcgatagtggtgagggctccggccctgaatatggtacca 23263990  T
Q  211 catgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||| |||||||| |||| |||||||||||| || ||||||||||| |||||||||||    
T  23263989 catgcttagttgcaattgtcgaggagtcttagaggtgttgtcatgtcattgcatgagtc 23263931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 239
Target Start/End: Original strand, 19649576 - 19649743
Alignment:
Q  75 cctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccat 172  Q
    |||||||||| ||||||||||||  | || |||||| ||||||||||| |  ||||  |   |||||||||||||||||| |||||||||||||||||||    
T  19649576 cctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggactcatgtcctga-aaaagaatgctttaaccat 19649674  T
Q  173 tcta-taaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    || | ||  | |||| |||||||| |||  ||||||||||||||||||  |||||||||||||||||||    
T  19649675 tcaattagcggtgagggcttcggccctgaatatggtaccacatgcatatctgcatttgttgaggagtct 19649743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 21074075 - 21074209
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttga 232  Q
    ||||||| ||||||||||  |||||||||||||||||||| || |  | |||| ||| |||| |||  ||||||||||||||||||||||||||||||||    
T  21074075 tgaggacccatgtcctga--aaagaatgctttaaccattcgattagcggtgagggctccggccctgaatatggtaccacatgcatagttgcatttgttga 21074172  T
Q  233 ggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||  | || |||||||| |||||||||||    
T  21074173 ggagtcttagaagtgtcgtcatgtcattgcatgagtc 21074209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 32911561 - 32911673
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||| ||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  32911561 gaatgctttaaacattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 32911660  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  32911661 atgcatgagtctt 32911673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 21124038 - 21124105
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||||    
T  21124038 atggtaccacatgcatagtcgaatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 21124105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 6482338 - 6482270
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||   ||||||||||||||||||||    
T  6482338 ttatggtaccacatgcatagttgcatttattgaggagtattagggggaatgtcatgtcttgcatgagtc 6482270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 13101253 - 13101364
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||   |||| ||||||||||||||||  ||||||| ||||||||||||||||| || ||||||||    
T  13101253 gaatgctttaaccattcaaaagcggtgagggcttcggtcatgtt-tggtaccacatgcatatatgcatttattgaggagtcttagtggtgtcgtcatgtc 13101351  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  13101352 atgcatgagtctt 13101364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 23269263 - 23269147
Alignment:
Q  154 aaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtc 252  Q
    ||||||||||||||||||||| |||  | |||| ||| |||| |||  ||||||||||||||| |||||||| |||| || ||||||||| || ||||||    
T  23269263 aaaagaatgctttaaccattcgatagcggtgagggctccggccctgaatatggtaccacatgcttagttgcaattgtcgaagagtcttagaggtgttgtc 23269164  T
Q  253 atgtc-ttgcatgagtc 268  Q
    ||||| |||||||||||    
T  23269163 atgtcattgcatgagtc 23269147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 23276132 - 23276016
Alignment:
Q  154 aaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtc 252  Q
    ||||||||||||||||||||| |||  | |||| ||| |||| |||  ||||||||||||||| |||||||| |||| || ||||||||| || ||||||    
T  23276132 aaaagaatgctttaaccattcgatagcggtgagggctccggccctgaatatggtaccacatgcttagttgcaattgtcgaagagtcttagaggtgttgtc 23276033  T
Q  253 atgtc-ttgcatgagtc 268  Q
    ||||| |||||||||||    
T  23276032 atgtcattgcatgagtc 23276016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 45028568 - 45028456
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| | |||| |||||||||  || ||||||||    
T  45028568 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttatcgaggggtcttagtgatgtcgtcatgtc 45028469  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  45028468 atgcatgagtctt 45028456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 23062582 - 23062462
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||| |||||||||   | ||||||||||||||||| || |  | |||| |||||||| |||  |||||||||||||||||||||||| |||||||    
T  23062582 tgaggacttatgtcctga---atgaatgctttaaccattcaattagcggtgagggcttcggccctgaatatggtaccacatgcatagttgcacttgttga 23062486  T
Q  233 ggagtcttagtggagttgtcatgt 256  Q
    ||||||||||  | ||||||||||    
T  23062485 ggagtcttagaagtgttgtcatgt 23062462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 6485805 - 6485737
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||    |||||||||||||||||||    
T  6485805 ttatggtaccacatgcatagttgcatttattgaggagtattagggggaaggtcatgtcttgcatgagtc 6485737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 23877854 - 23877786
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||||||||| |||| | |||||||||| || ||||||||||| |||||||||||    
T  23877854 tatggtaccacatgcatagttgcaattgtcggggagtcttagaggtgttgtcatgtcattgcatgagtc 23877786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 24660470 - 24660405
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||| ||||| ||||||||||||||| || ||||||||||| |||||||||||    
T  24660470 tggtaccacatgcatagtcgcatt-gttgaggagtcttagaggtgttgtcatgtcattgcatgagtc 24660405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 25590280 - 25590390
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||  |||||| |||||| ||| || ||||||||    
T  25590280 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatta-ttgaggggtcttaatggtgtcgtcatgtc 25590377  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  25590378 atgcatgagtctt 25590390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 27272310 - 27272200
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||| ||||||||| || || |||||    
T  27272310 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat-ttgaggattcttagtggtgtagtgatgtc 27272213  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  27272212 atgcatgagtctt 27272200  T

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Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 22796608 - 22796643
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  22796608 atatacacaagtggagtcagttgcataagcataaaa 22796643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 23062746 - 23062711
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  23062746 atatacacaagtggagtcagttgcataagcataaaa 23062711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 17633823 - 17633782
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  17633823 atagttgcatttgttgaggagtcttagtggtgtcgtcatgtc 17633782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 22810024 - 22809882
Alignment:
Q  76 ctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgtta--tgatgaggactcatgtcctgataaaagaatgctttaaccatt 173  Q
    ||||||||| ||||||||||||  | || ||||||| |||||||||| |  ||||   || |||||||| ||||||||| ||| ||||||||||||||||    
T  22810024 ctggaacgccttgtcgttcaaagcggtggaacacta-gttgttcaaagcggtgtttagtggtgaggacttatgtcctga-aaatgaatgctttaaccatt 22809927  T
Q  174 ctataaagatgagagcttcggctct-gttatggtaccacatgcat 217  Q
    |||||  | |||| || ||||| || | |||||||||||||||||    
T  22809926 ctatagcggtgagggcctcggccctggatatggtaccacatgcat 22809882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 22860501 - 22860468
Alignment:
Q  13 aatatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||||||||||||||||||||    
T  22860501 aatatacacaagtggagtcagttgcataagcata 22860468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 23090191 - 23090232
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  23090191 tatggtaccacatgcatagttgcatttatcgaggagtcttag 23090232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 23102619 - 23102660
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  23102619 tatggtaccacatgcatagttgcatttatcgaggagtcttag 23102660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 23169458 - 23169499
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtctta 241  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  23169458 ttatggtaccacatgcatagttgcatttatcgaggagtctta 23169499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 23580715 - 23580756
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtctta 241  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  23580715 ttatggtaccacatgcatagttgcatttatcgaggagtctta 23580756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 8889947 - 8889979
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  8889947 atatacacaagtggagtcagttgcataagcata 8889979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 20648270 - 20648238
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  20648270 atatacacaagtggagtcagttgcataagcata 20648238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 20724115 - 20724032
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||||||||||||| ||| ||||||||||||||||| || |  | |||| |||||||| ||| ||||||||||||||||||    
T  20724115 tgaggactcatgtcctga-aaatgaatgctttaaccattcaattagcggtgagggcttcggccctgattatggtaccacatgcat 20724032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 24660661 - 24660629
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  24660661 atatacacaagtggagtcagttgcataagcata 24660629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 25107449 - 25107481
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  25107449 atatacacaagtggagtcagttgcataagcata 25107481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 25267400 - 25267368
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  25267400 atatacacaagtggagtcagttgcataagcata 25267368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 200658 - 200619
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  200658 ttatggtaccacatgcatatttgcatttattgaggagtct 200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 17592658 - 17592724
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    ||||||||||||||||  ||||||| |||||||||| |||||  || |||||||| ||||||||||||    
T  17592658 tggtaccacatgcatatctgcatttattgaggagtc-tagtgatgtcgtcatgtcatgcatgagtctt 17592724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 21133350 - 21133453
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaaga--tgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttg 231  Q
    |||||||| ||||||||||    ||||||||||||||||| | | ||   |||| |||||||| |||  |||||||| ||||||||| ||||||||||||    
T  21133350 tgaggacttatgtcctgat----gaatgctttaaccattcaaaacagcggtgagggcttcggccctgaatatggtactacatgcatatttgcatttgttg 21133445  T
Q  232 aggagtct 239  Q
    ||||||||    
T  21133446 aggagtct 21133453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 26582693 - 26582650
Alignment:
Q  199 gttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||    
T  26582693 gttatggtaccacatgcatagttgcatttattgaagagtattag 26582650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 36800572 - 36800506
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    ||||||||||||||||   |||||  |||||| |||||||||| ||||||||||| ||||||||||||    
T  36800572 tggtaccacatgcatatcggcatta-ttgaggggtcttagtggtgttgtcatgtcatgcatgagtctt 36800506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 43693418 - 43693379
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  43693418 ttatggtaccacatgcatatttgcatttattgaggagtct 43693379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 28971440 - 28971478
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  28971440 tatggtaccacatgcatatttgcatttattgaggagtct 28971478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 11466130 - 11466051
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| ||||||   ||||| |||||||||||||||| ||||||||||||||||||||    
T  11466130 gaatgctttaaccattcaaaagcggtgagggcttcgatcctgtt-tggtaccacatgcata-ttgcatttgttgaggagtct 11466051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 8728992 - 8729254
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  8728992 atatacacaagtggagtcagttgcataagcataaaaa-------acgatgaggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 8729084  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  8729085 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 8729184  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8729185 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 8729254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 24321583 - 24321839
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  24321583 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaacgatggaacactatg 24321674  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  24321675 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccaca 24321774  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  24321775 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 24321839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 8596072 - 8596322
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  8596072 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 8596163  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  8596164 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaa-gaatgctttaaccattctataacgatgagagcttcggctctgatatggtaccaca 8596262  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  8596263 tgcataattgcatttgttgaggagtcttagaagagttgtcatgtcttgcatgagtcttag 8596322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 105 - 282
Target Start/End: Original strand, 27942237 - 27942415
Alignment:
Q  105 aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgat-aaaagaatgctttaaccattctataaagatgagagcttcggctctgttat 203  Q
    |||||||||||||||||| |  |||||    |||||||||||||||||| ||||||||| |||||||||||||||| | |||| |||||||||||| |||    
T  27942237 aacactatgttgttcaaagcggtgttaatgggaggactcatgtcctgatgaaaagaatgttttaaccattctataacggtgagggcttcggctctgatat 27942336  T
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27942337 ggtaccacatgcatagttgcatttgttgaggagtcttagttgagttgtcatgtcttgcatgagtcttagcggtggtgtc 27942415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 23653084 - 23653216
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||| |||||||||||||    |||||||||||||| || |  | |||| |||||||| |||  ||||||||||||||||||||||||||||||||    
T  23653084 tgaggacttatgtcctgataaa----tgctttaaccattcaattagcggtgagggcttcggccctgaatatggtaccacatgcatagttgcatttgttga 23653179  T
Q  233 ggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  23653180 ggagtcttagtggtgttgtcatgtcattgcatgagtc 23653216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 14057703 - 14057823
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| ||||||||||||  ||||||||||||||||| |||  | |||| ||| |||| |||  ||||||||||||||||||||||||||||| |||    
T  14057703 tgaggacttatgtcctgataa--gaatgctttaaccattcgatagcggtgagggctccggccctgaatatggtaccacatgcatagttgcatttgtcgag 14057800  T
Q  234 gagtcttagtggagttgtcatgtc 257  Q
    ||||||||| || |||||||||||    
T  14057801 gagtcttagagg-gttgtcatgtc 14057823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 268
Target Start/End: Complemental strand, 18609988 - 18609741
Alignment:
Q  13 aatatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactat 112  Q
    ||||||||| ||||||||||||||||||||||||||| ||          |||| |||||| ||||||| || |||||||| |||  | || |||||||     
T  18609988 aatatacaccagtggagtcagttgcataagcataaaagcgg---------gagggcttcggccctggaatgccttgtcgttgaaagcggtggaacacta- 18609899  T
Q  113 gttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtacc 209  Q
    |||||||||| |  ||||  |   |||||||| |||||||||  |||||||||||||||||||| |||    |||| ||| |||| |||  |||||||||    
T  18609898 gttgttcaaagcggtgtttagcggtgaggacttatgtcctga--aaagaatgctttaaccattcgatagcagtgagggctccggccctgaatatggtacc 18609801  T
Q  210 acatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||| || | |||||||||||| || ||||||||||| |||||||||||    
T  18609800 acatgcatagttgcaattatcgaggagtcttagaggtgttgtcatgtcattgcatgagtc 18609741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 14416645 - 14416756
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||| ||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  14416645 gaatgctttaatcattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 14416743  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  14416744 atgcatgagtctt 14416756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 23653900 - 23653787
Alignment:
Q  158 gaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatg 255  Q
    |||||||||||||||||||| |  | |||| |||||||| |||  ||||||||||||||||||||||||||| |||||||||| ||| || |||||||||    
T  23653900 gaatgctttaaccattctattagcggtgagggcttcggccctgaatatggtaccacatgcatagttgcatttcttgaggagtc-taggggtgttgtcatg 23653802  T
Q  256 tc--ttgcatgagtc 268  Q
    ||  |||||||||||    
T  23653801 tcatttgcatgagtc 23653787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 21930618 - 21930562
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  21930618 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 21930562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 44476253 - 44476185
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||    |||||||||||||||||||    
T  44476253 ttatggtaccacatgcatagttgcatttattgaggagtattagggggaaggtcatgtcttgcatgagtc 44476185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 44479515 - 44479447
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||    |||||||||||||||||||    
T  44479515 ttatggtaccacatgcatagttgcatttattgaggagtattagggggaaggtcatgtcttgcatgagtc 44479447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 11392721 - 11392788
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    ||||||||||||||||  ||||||| ||||||||||||||||  || |||||||| ||||||||||||    
T  11392721 tggtaccacatgcatatctgcatttattgaggagtcttagtgatgtcgtcatgtcatgcatgagtctt 11392788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 22025679 - 22025762
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||| ||| ||||||||||||||||||| |  | |||| |||||||| ||| ||||||||||||||||||    
T  22025679 tgaggacttatgtcctgaaaaatgaatgctttaaccattctacagcggtgagggcttcggccctgattatggtaccacatgcat 22025762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 27873812 - 27873746
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  27873812 tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtcctgcatgagtctt 27873746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 27889942 - 27889876
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  27889942 tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtcctgcatgagtctt 27889876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 27948600 - 27948534
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  27948600 tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtcgtcatgtcctgcatgagtctt 27948534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 29299192 - 29299258
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  29299192 tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtagtcatgtcatgcatgagtctt 29299258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 29305738 - 29305804
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  29305738 tggtaccacatgcataattgcatat-ttgaggagtcttagtggtgtagtcatgtcatgcatgagtctt 29305804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 20974116 - 20974201
Alignment:
Q  133 gatgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| ||  | |||| |||||||| ||| ||||||||||||||||||    
T  20974116 gatgaggacttatgtcctga-aaaagaatgctttaaccattctattagcggtgagggcttcggccctgattatggtaccacatgcat 20974201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 25701683 - 25701752
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||||||||||||  |||||| | ||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  25701683 tggtaccacatgcattattgcatattttgaggagtctcagtggtgttgtaatgtcatgcatgagtcttag 25701752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 21322355 - 21322439
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||| ||||||||||||||||||||| | ||  | |||| |||||||| ||| ||||||||||||||||||    
T  21322355 tgaggacttatgtcctgaaaaaagaatgctttaaccattcgattagcggtgagggcttcggccctgattatggtaccacatgcat 21322439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 25110886 - 25110830
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | ||||||||| |||||||||||| || |||||||||||    
T  25110886 tatggtaccacatgcatggctgcatttgtcgaggagtcttaggggtgttgtcatgtc 25110830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 10607128 - 10607093
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  10607128 atatacacaagtggagtcagttgcataagcataaaa 10607093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 21300125 - 21300160
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  21300125 atatacacaagtggagtcagttgcataagcataaaa 21300160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 23825141 - 23825102
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  23825141 ttatggtaccacatgcatatttgcatttgttgaggagtct 23825102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 31412607 - 31412710
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaaga--tgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttg 231  Q
    |||||||| ||||||||||    ||||||||||||||||| | | ||   |||| |||||||| ||| ||||||||||||||||||| |||||||| |||    
T  31412607 tgaggacttatgtcctgat----gaatgctttaaccattcaaaacagcggtgagggcttcggccctgattatggtaccacatgcatatttgcatttattg 31412702  T
Q  232 aggagtct 239  Q
    ||||||||    
T  31412703 aggagtct 31412710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 31418789 - 31418892
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaaga--tgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttg 231  Q
    |||||||| ||||||||||    ||||||||||||||||| | | ||   |||| |||||||| ||| ||||||||||||||||||| |||||||| |||    
T  31418789 tgaggacttatgtcctgat----gaatgctttaaccattcaaaacagcggtgagggcttcggccctgattatggtaccacatgcatatttgcatttattg 31418884  T
Q  232 aggagtct 239  Q
    ||||||||    
T  31418885 aggagtct 31418892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 39363473 - 39363422
Alignment:
Q  218 agttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  39363473 agttgcatttgtcgaggagtcttagtggtgttgtcatgtcattgcatgagtc 39363422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 43687414 - 43687348
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    ||||||||||||||||  ||||||  |||||| |||||||||| ||||||||||| ||||||||||||    
T  43687414 tggtaccacatgcatatctgcatta-ttgaggggtcttagtggtgttgtcatgtcatgcatgagtctt 43687348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 25409572 - 25409514
Alignment:
Q  199 gttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||||||||||||||| ||||||||  |||| || | |||||||||    
T  25409572 gttatggtaccacatgcatagttgcatttattgaggagaattaggggggatgtcatgtc 25409514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 17053614 - 17053577
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||||||||||||||||||||||||||| |||||||||    
T  17053614 ttatggtaccacatgcatagttgcatttattgaggagt 17053577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 19859706 - 19859674
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  19859706 atatacacaagtggagtcagttgcataagcata 19859674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 21326943 - 21327027
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||  ||||||||||||||||||||| | ||  | |||| |||||||| ||| ||||||||||||||||||    
T  21326943 tgaggacttatgtcctggaaaaagaatgctttaaccattcgattagcggtgagggcttcggccctgattatggtaccacatgcat 21327027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 21683670 - 21683702
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  21683670 atatacacaagtggagtcagttgcataagcata 21683702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 21688019 - 21688051
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  21688019 atatacacaagtggagtcagttgcataagcata 21688051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 21690412 - 21690444
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  21690412 atatacacaagtggagtcagttgcataagcata 21690444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 36445731 - 36445763
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  36445731 atatacacaagtggagtcagttgcataagcata 36445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 19903088 - 19903130
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  19903088 ttatggtaccacatgcataattgcatttattgaggagtattag 19903130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 23865451 - 23865409
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  23865451 ttatggtaccacatgcatacttgcatttattgaggagtattag 23865409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 29328254 - 29328142
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||| ||||| | |  | |||| |||||||  ||||| |||||| |||||||||  |||||  ||||||||||| |||||| || ||||||||    
T  29328254 gaatgctttaatcattcaaaagcggtgagggcttcggtcctgtt-tggtacgacatgcatatatgcata-gttgaggagtcgtagtggtgtcgtcatgtc 29328157  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||||||||    
T  29328156 atgcatgagtcttag 29328142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 22063682 - 22063723
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta 176  Q
    |||||||| ||||||||| ||| |||||||||||||||||||    
T  22063682 tgaggacttatgtcctgaaaaatgaatgctttaaccattcta 22063723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 20783852 - 20783884
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||| |||||||||||||||||||||    
T  20783852 atatacacaaggggagtcagttgcataagcata 20783884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 23654037 - 23654005
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||||| |||||||||||||    
T  23654037 atatacacaagtggagtcaattgcataagcata 23654005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 30767109 - 30767145
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggag 236  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  30767109 ttatggtaccacatgcatatttgcatttattgaggag 30767145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 21705418 - 21705162
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  21705418 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgctttgtcgttcaaaacgatggaacactatg 21705327  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  21705326 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccaca 21705227  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  21705226 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 21705162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 20852046 - 20852302
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  20852046 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaacgatggaacactatg 20852137  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  20852138 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccaca 20852237  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  20852238 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 20852302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 20858672 - 20858928
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  20858672 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggttctggaacgctttgtcgttcaaaacgatggaacactatg 20858763  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  20858764 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgttatggtaccaca 20858863  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  20858864 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtg 20858928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 16371733 - 16371477
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||| ||| |||||| || ||||||||||||| |||| | |||||||    
T  16371733 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttgggttctggaaagccttgtcgttcaaaacgatggagcactatg 16371642  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  16371641 ttgttcaaaacgatgttaacgatgaggacttatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcggctctgatatggtaccaca 16371542  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16371541 tgcatggttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagcggtg 16371477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 16669336 - 16669500
Alignment:
Q  105 aacactatgttgttcaaaacaatgttatgatgaggactcatgtcctga-taaaagaatgctttaaccattctataaagatgagagcttcggctctgttat 203  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16669336 aacactttgttgttcaaaacgatgttatgatgaggactcgtgtcctgaataaaagaatgctttaaccattctaataagatgagagcttcggctctgttat 16669435  T
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16669436 ggtaccacatgcataattgcatttgttgaggagtcttagtagagttgtcatgtcttgcatgagtc 16669500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 21709959 - 21709801
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||| | ||||| ||||||||||||||| |||| |||||||||    
T  21709959 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtacaggaacactttgtcgttcaaaacgatggaacactatg 21709868  T
Q  114 ttgttcaaaacaatgtta-tgatgaggactcatgtcctgataaaagaatgctttaaccattctataa 179  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21709867 ttgttcaaaacgatgttaatgatgaggactcatgtcctgataaaagaatgctttaaccattctataa 21709801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 19961330 - 19961135
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||| ||||||||||||||||||||| || ||        ||| | ||||||||||||||| ||||||||||||  | || |||||||||    
T  19961330 atatacacaagtgg-gtcagttgcataagcataaaagcggtg--------agggcctcggtcctggaacgccttgtcgttcaaagcggtggaacactatg 19961240  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    |||||| || |  |||||  | ||||||||||||||| ||||||||||||||||||||||||||||  | |||| ||| |||||||| ||||||||||||    
T  19961239 ttgttcgaagcggtgttagcggtgaggactcatgtccggataaaagaatgctttaaccattctatagcggtgagggctccggctctgatatggtaccaca 19961140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 19664225 - 19664346
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| ||||||||||||  ||||||||||||||||| |||    |||| ||| |||| |||  ||||||||||||||||||| |||||||||||||    
T  19664225 tgaggacttatgtcctgataa--gaatgctttaaccattcgatagcagtgagggctccggccctgaatatggtaccacatgcatagctgcatttgttgag 19664322  T
Q  234 gagtcttagtggagttgtcatgtc 257  Q
    ||||||||| || |||||||||||    
T  19664323 gagtcttagaggtgttgtcatgtc 19664346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 43088450 - 43088338
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||| |||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| ||||||||||||||||| || ||||||||    
T  43088450 gaatactttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgaggagtcttagtggtgtcgtcatgtc 43088351  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  43088350 atgcatgagtctt 43088338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 21987128 - 21987195
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  21987128 atggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 21987195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 20438692 - 20438773
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||| || |||||| |||| || |  |||||||||||||||||||||||||||||||||    
T  20438692 ttatggtaccacatgcatagttgcatttatttaggagtattagggg-gaggtcatgtcttgcatgagtcttagcggtggtgtc 20438773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 36615013 - 36614882
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgagg 234  Q
    |||||||| ||||||||||    ||||||||||||||||| | |  | |||| | |||||| ||||| |||||||||||||||| |||||||| ||||||    
T  36615013 tgaggacttatgtcctgat----gaatgctttaaccattcaaaagcggtgagggtttcggccctgttttggtaccacatgcataattgcatttattgagg 36614918  T
Q  235 agtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
     |||||||||| ||  ||||||| ||||||||||||    
T  36614917 ggtcttagtggtgtcttcatgtcatgcatgagtctt 36614882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 47484165 - 47484054
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | ||||||||||||  ||||| |||||||||||||||| |||||||| || ||| |||||||||| || ||||||||    
T  47484165 gaatgctttaaccattcaaaagcggtgagagcttcggtcctgtt-tggtaccacatgcataattgcatttattaaggggtcttagtggtgtcgtcatgtc 47484067  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  47484066 atgcatgagtctt 47484054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 49328091 - 49327980
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  49328091 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 49327993  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  49327992 atgcatgagtctt 49327980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 16669307 - 16669359
Alignment:
Q  51 cgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatg 103  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  16669307 cgatgttatgatgaggacttcggtcctggaacactttgttgttcaaaacgatg 16669359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 9269990 - 9269910
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| ||||||| |||||| |||||||||||||||| |||||||| |||||||||||    
T  9269990 gaatgctttaaccattcaaaagcggtgagggcttcggttctgtt-tggtaccacatgcatatttgcatttattgaggagtct 9269910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 5380698 - 5380654
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  5380698 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtc 5380654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 29596914 - 29597024
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | | ||||||||||||| | || ||||||||    
T  29596914 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatatct-gaggagtcttagtagtgtcgtcatgtc 29597011  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  29597012 atgcatgagtctt 29597024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 19666713 - 19666748
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  19666713 atatacacaagtggagtcagttgcataagcataaaa 19666748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 21664358 - 21664323
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  21664358 atatacacaagtggagtcagttgcataagcataaaa 21664323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 21732671 - 21732637
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaa 48  Q
    |||||||||||||||||||||||||||||||||||    
T  21732671 atatacacaagtggagtcagttgcataagcataaa 21732637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 23195637 - 23195675
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  23195637 tatggtaccacatgcatatttgcatttgttgaggagtct 23195675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 7792987 - 7793028
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  7792987 atagttgcatttgttgaggagtcttagtggtgtcgtcatgtc 7793028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 11157042 - 11156938
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||| |||||||||   | ||||||||||||||||| || |  | |||| |||||||| |||  |||||||||||| ||||||||||| |||||||    
T  11157042 tgaggacttatgtcctga---acgaatgctttaaccattcaattagtggtgagggcttcggccctgaatatggtaccacacgcatagttgcacttgttga 11156946  T
Q  233 ggagtctt 240  Q
    ||||||||    
T  11156945 ggagtctt 11156938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 21734641 - 21734682
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  21734641 atagttgcatttgttgaggagtcttagtggtgtcgtcatgtc 21734682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 15316486 - 15316518
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  15316486 atatacacaagtggagtcagttgcataagcata 15316518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 20849224 - 20849192
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  20849224 atatacacaagtggagtcagttgcataagcata 20849192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 21410656 - 21410688
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  21410656 atatacacaagtggagtcagttgcataagcata 21410688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 29554427 - 29554623
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||| |||| ||          |||| || ||| |||||||||| ||||||||||||  | || ||||||| |    
T  29554427 atatacacaagtggagtcagttgcataagcacaaaagcg---------ggagggctccggccctggaacgccttgtcgttcaaagcggtggaacacta-g 29554516  T
Q  114 ttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaagaatgctttaaccattctataaaga-tgagagcttcggctctg-ttatggtacc 209  Q
    ||||||||| |  ||||    | |||||||| ||||||||| ||| ||||||||||||||||| || |  | |||| |||||||| ||| ||||||||||    
T  29554517 ttgttcaaagcggtgtttagcggtgaggacttatgtcctga-aaatgaatgctttaaccattcaattagcagtgagggcttcggccctgattatggtacc 29554615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 16883522 - 16883557
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16883522 atatacacaagtggagtcagttgcataagcacaaaa 16883557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 19853229 - 19853194
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  19853229 atatacacaattggagtcagttgcataagcataaaa 19853194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 19859364 - 19859329
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||| |||||||||||||||||||||||||    
T  19859364 atatacacaattggagtcagttgcataagcataaaa 19859329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 21542073 - 21542034
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  21542073 ttatggtaccacatgcatatttgcatttattgaggagtct 21542034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 21920810 - 21920744
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| |||||| | | ||||||||||||| | || |||||||| ||||||||||||    
T  21920810 tggtaccacatgcataattgcatatct-gaggagtcttagtagtgtcgtcatgtcatgcatgagtctt 21920744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 23195455 - 23195490
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||| ||||||||||||||||||||||||||    
T  23195455 atatacacatgtggagtcagttgcataagcataaaa 23195490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 32650296 - 32650261
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||||||||||||||||||||||| |||||||    
T  32650296 atatacacaagtggagtcagttgcataatcataaaa 32650261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 21745846 - 21745887
Alignment:
Q  216 atagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||||||||||||||||||| | || ||||||||    
T  21745846 atagttgcatttgttgaggagtcttagtcgtgtcgtcatgtc 21745887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 24850157 - 24850077
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | |||||||||||    
T  24850157 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcatatttgcatctattgaggagtct 24850077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 41110831 - 41110794
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  41110831 ttatggtatcacatgcatagttgcatttattgaggagt 41110794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 42626257 - 42626177
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | |||||||||||    
T  42626257 gaatgctttaaccattcaaaagtggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatctattgaggagtct 42626177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 20824444 - 20824487
Alignment:
Q  135 tgaggactcatgtcctgataaaa--gaatgctttaaccattcta 176  Q
    |||||||||||||||||| ||||  |||||||||||||||||||    
T  20824444 tgaggactcatgtcctgaaaaaaatgaatgctttaaccattcta 20824487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 498 - 238
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttat-gatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||| ||||||||||||| |||| || || ||    
T  498 atatacacaagtggagtcagttgcataagcataaaaacgatgttaacgatgagaacttcggttctggaacgccttgtcgttcaaaacgatggaatacgat 399  T
Q  113 gttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  398 gttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgagagcttcggctctgatatggtaccac 299  T
Q  212 atgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  298 atgcatagttgcatttgttgataagtcttagtagagttgtcatgtcttgcatgagtcttag 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 117 - 374
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||| ||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  117 atatacacaagtggagtcaattgcataagcataaaaacgatg--------aggacttcggtactggaacgctttgtcgttcaaaacgatggaacactatg 208  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||||    
T  209 ttgttcaaaacgatgttaacgatgatgactcatgtcctgataaaagaatgctttaaccattctataacgatgagggcttcagctctgttatggtcccaca 308  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtgg 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  309 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctgcatgagtcttagaggtgg 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 166; Significance: 8e-89; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 92115 - 92364
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  92115 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 92206  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  92207 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaa-gaatgctttaaccattctataacgatgagagcttcggctctgatatggtaccaca 92305  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctta 271  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  92306 tgcataattgcatttgttgaggagtcttagaagagttgtcatgtcttgcatgagtctta 92364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 97841 - 98090
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  97841 atatacacaagtggagtcagttgcataagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 97932  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  97933 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaa-gaatgctttaaccattctataacgatgagagcttcggctctgatatggtaccaca 98031  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctta 271  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  98032 tgcataattgcatttgttgaggagtcttagaagagttgtcatgtcttgcatgagtctta 98090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 272
Target Start/End: Complemental strand, 12045 - 11780
Alignment:
Q  16 atacacaagtggagtcagttgcataagcataaaaac--gatgttatgatg-aggacttcggtcctggaacgctttgtcgtt-caaaatgatgaaacacta 111  Q
    |||||| || |||||||||||||||||||||||||   |||||||||||| ||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  12045 atacactagaggagtcagttgcataagcataaaaaaatgatgttatgatggaggacttcggtccaggaacgccttgtcgttacaaaatgatggaacacta 11946  T
Q  112 tgttgttcaaaac-aatgttatgatgaggactcatgtcctgataaaa--gaatgctttaaccattct-ataaagatgagagcttcggc-tctgttatggt 206  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  11945 tgt-gttcaaaacgaatgttatgatgaggactcatgtcctgataaaaagaaatgctttaaccattctaataaagatgagagcttcggcttctgttatggt 11847  T
Q  207 -accacatgcatagttgcatttgttgaggagtcttagtggagttgtcat-gtcttgcatgagtcttag 272  Q
     ||||||||||||||| || |||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  11846 aaccacatgcatagtttca-ttgttgaggagtcttagtagaggtgtcatagtcttgcatgagtcttag 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 126; Significance: 6e-65; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 62 - 278
Target Start/End: Original strand, 493978 - 494195
Alignment:
Q  62 tgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgataaaa-gaa 160  Q
    ||||||| ||||||||||||||| ||||||||||||  | || |||||||||||||||||| |  |||||    |||||||||||||||||||||| |||    
T  493978 tgaggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttaatgggaggactcatgtcctgataaaaagaa 494077  T
Q  161 tgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttg 260  Q
    ||||||||||||||||||| | |||| ||  |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  494078 tgctttaaccattctataacggtgagggccccggccctgatatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcctg 494177  T
Q  261 catgagtcttagcggtgg 278  Q
    ||||||||||||||||||    
T  494178 catgagtcttagcggtgg 494195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 179081 - 178950
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgagg 234  Q
    |||||||| ||||||||||    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||  |||||||| ||||||    
T  179081 tgaggacttatgtcctgat----gaatgctttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcatgattgcatttattgagg 178986  T
Q  235 agtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
     |||||||||| || |||||||| ||||||||||||    
T  178985 ggtcttagtggtgtcgtcatgtcatgcatgagtctt 178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 96043 - 96008
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  96043 atatacacaagtggagtcagttgcataagcataaaa 96008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 174722 - 174779
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||||||||||||||||||||||| ||||||||  |||| || | |||||||||    
T  174722 ttatggtaccacatgcatagttgcatttattgaggagaattaggggggatgtcatgtc 174779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 524647 - 524603
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||| |||||||||||||||||||||||| || ||||||||    
T  524647 tgcatagtcgcatttgttgaggagtcttagtggtgtcgtcatgtc 524603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 121; Significance: 6e-62; HSPs: 3)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 14 - 270
Target Start/End: Original strand, 14779 - 15027
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||| |||||| |||||||||| ||        ||||| ||||||||||||||| ||||||||||||  | || |||||||||    
T  14779 atatacacaagtggagtcagtcgcataa-cataaaaacggtg--------aggacctcggtcctggaacgccttgtcgttcaaagcggtggaacactatg 14869  T
Q  114 ttgttcaaaacaatgttatgatgaggactcatgtcctgata-aaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccaca 212  Q
    ||||||||| |  |||||    ||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| ||| ||||||||||||    
T  14870 ttgttcaaagcggtgttaatgggaggactcatgtcctgatataaagaatgctttaaccattctataacggtgagggcttcggccctgatatggtaccaca 14969  T
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  14970 tgcatagttgcatttgttgaggagtcttagaggagtcgtcatgtcatgcatgagtctt 15027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 73 - 268
Target Start/End: Original strand, 7840 - 8038
Alignment:
Q  73 gtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaacc 170  Q
    |||||||||||| ||||||||||||  | || |||||| ||||||||||| |  ||||  |   |||||||| |||||||||  || |||||||||||||    
T  7840 gtcctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggacttatgtcctga--aatgaatgctttaacc 7937  T
Q  171 attctataaaga-tgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagt 267  Q
    |||| || |  | |||| ||| |||| | |  |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  7938 attcaattagcagtgagggctccggcccagaatatggtaccatatgcatagttgcatttgttgaggagtcttagaggtgttgtcatgtcattgcatgagt 8037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Original strand, 6968 - 7023
Alignment:
Q  214 gcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6968 gcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 7023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 166 - 1
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||||||||||| |||||||||||||||        || |||||||| ||||||||||||||||||||||| |||| ||||| |||    
T  166 atatacacaagtggagtcagttgcattagcataaaaacgatg--------agaacttcggttctggaacgctttgtcgttcaaaacgatggaacacgatg 75  T
Q  114 ttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgag 186  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  74 ttgttcaaaacgatgttaacgatgaggactcatgtcctgataaaagaatgctttaaccattctataacgatgag 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 137 - 278
Target Start/End: Original strand, 4264 - 4406
Alignment:
Q  137 aggactcatgtcctgat-aaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgagga 235  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | |||| ||  |||| ||| |||||||||||||||||||||||||||||||||||    
T  4264 aggactcatgtcctgatgaaaagaatgctttaaccattctataacggtgagggcaacggccctgatatggtaccacatgcatagttgcatttgttgagga 4363  T
Q  236 gtcttagtggagttgtcatgtcttgcatgagtcttagcggtgg 278  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||    
T  4364 gtcttagtggagtcgtcatgtcctgcatgagtcttagcagtgg 4406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 4174 - 4212
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacg 52  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4174 atatacacaagtggagtcagttgcataagcataaaaacg 4212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 83; Significance: 3e-39; HSPs: 4)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 200 - 282
Target Start/End: Original strand, 36977 - 37059
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 282  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36977 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtggtgtc 37059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 44179 - 44247
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||| |||||||||||||| |||||||||||| || | ||||||||| |||||||||||    
T  44179 tatggtaccacatggatagttgcatttgtcgaggagtcttagaggtgctgtcatgtcattgcatgagtc 44247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 45093 - 45061
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  45093 atatacacaagtggagtcagttgcataagcata 45061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 9423 - 9391
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||| |||||||||||||||||    
T  9423 atatacacaagtggattcagttgcataagcata 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 4584 - 4693
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||| |||| | |||||||    
T  4584 atatacacaagtggagtcagttgcataagcataaaaacgatg--------aggacttcggtcctggaacgccttgtcgttcaaaacgatggagcactatg 4675  T
Q  114 ttgttcaaaacaatgtta 131  Q
    ||||||||||| ||||||    
T  4676 ttgttcaaaacgatgtta 4693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 1 - 46
Alignment:
Q  232 aggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1 aggagtcttagtggagttgtcatgtcttgcatgagtcttagcggtg 46  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 2e-28; HSPs: 6)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 217
Target Start/End: Complemental strand, 72377 - 72229
Alignment:
Q  70 tcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaa 168  Q
    ||||||||||||||| |||||||| |||  | || |||||||||||||||||| |  | |||  | ||||||||||||||||||||||||||||||||||    
T  72377 tcggtcctggaacgccttgtcgtttaaagcggtggaacactatgttgttcaaagcggtattagcggtgaggactcatgtcctgataaaagaatgctttaa 72278  T
Q  169 ccattctataaagatgagagcttcggctctgttatggtaccacatgcat 217  Q
    ||||||||||  | |||| ||||||||  || |||||||||||||||||    
T  72277 ccattctatagcggtgagggcttcggccttgatatggtaccacatgcat 72229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 35867 - 35927
Alignment:
Q  183 tgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    |||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  35867 tgagggcttcggctctgaatatggtaccacatgcatagttgcatttgttgaggagtcttag 35927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 10205 - 10306
Alignment:
Q  139 gactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggag 236  Q
    |||||||||||||| ||||||||||||||||||||| || |  | |||| |||||||| |||  |||||||||||||||||| |||||||| ||||||||    
T  10205 gactcatgtcctga-aaaagaatgctttaaccattcgattagcggtgagggcttcggccctgaatatggtaccacatgcatatttgcatttattgaggag 10303  T
Q  237 tct 239  Q
    |||    
T  10304 tct 10306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 17497 - 17602
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |  | |||| | |||||| |||  |||||||||||||||||| |||||||| ||||    
T  17497 tgaggactcatgtcctga-aaaagaatgttttaaccattcgatcagcggtgagggtttcggccctgaatatggtaccacatgcatatttgcatttattga 17595  T
Q  233 ggagtct 239  Q
    |||||||    
T  17596 ggagtct 17602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 412 - 446
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaa 48  Q
    |||||||||||||| ||||||||||||||||||||    
T  412 atatacacaagtggggtcagttgcataagcataaa 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 6571 - 6605
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaa 48  Q
    |||||||||||||| ||||||||||||||||||||    
T  6571 atatacacaagtggggtcagttgcataagcataaa 6605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 1 - 81
Alignment:
Q  192 cggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  1 cggccctgatatggtaccacatgcatagttgcatttgttgaggagtcttagaggagttgtcatgtcccgcatgagtcttag 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 24484 - 24680
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||| ||||||||||||||||||||| || ||        ||| | ||||||||||||||  ||||||||||||  | || |||||||||    
T  24484 atatacacaagtgg-gtcagttgcataagcataaaagcggtg--------agggcctcggtcctggaacgacttgtcgttcaaagcggtggaacactatg 24574  T
Q  114 ttgttcaaaacaatgtt-atgatgaggactcatgtcctgat-aaaagaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccac 211  Q
    ||||||||| |  |||| | | ||||||||||||||||||| ||||||||||||||||||||||||||   || | ||| |||| ||| |||||||||||    
T  24575 ttgttcaaagcggtgttaacggtgaggactcatgtcctgataaaaagaatgctttaaccattctataacagtgcgggctccggccctgatatggtaccac 24674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 4222 - 4354
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataa-agatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||| ||||||||||    ||||||||||||||||| || | || |||| |||||||| |||  ||||||||||||||||||||||||||||| ||    
T  4222 tgaggacttatgtcctgat----gaatgctttaaccattcaattagaggtgagggcttcggccctgaatatggtaccacatgcatagttgcatttgtcga 4317  T
Q  233 ggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  4318 ggagtcttagtggtgttgtcatgtcattgcatgagtc 4354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 986 - 877
Alignment:
Q  70 tcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgtta-tgatgaggactcatgtcctgataaaagaatgctttaa 168  Q
    ||||||||||||||| ||||||||||||  | || |||||||||||||||||| |  ||||| || ||||||| |||||| |||||||||||||||||||    
T  986 tcggtcctggaacgccttgtcgttcaaagcggtggaacactatgttgttcaaagcggtgttagtggtgaggacgcatgtcttgataaaagaatgctttaa 887  T
Q  169 ccattctata 178  Q
    ||||||||||    
T  886 ccattctata 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 272
Target Start/End: Complemental strand, 682 - 569
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | ||||||||||||||||  |||||||||||    
T  682 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatattttgaggagtcttagtgatgttgtcatgtc 584  T
Q  258 ttgcatgagtcttag 272  Q
     ||||||||||||||    
T  583 atgcatgagtcttag 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 115817 - 115682
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| |||||||||  |||||||||||||||||||| |||  | |||| ||| |||| ||   |||||||||||||||||||||||| |||| |||    
T  115817 tgaggacttatgtcctga--aaagaatgctttaaccattcgatagtggtgagggctccggccctaaatatggtaccacatgcatagttgcaattgtcgag 115720  T
Q  234 gagtcttagtggagttgtcatgtc-ttgcatgagtctt 270  Q
    ||||||||| || ||||||||||| |||||||||||||    
T  115719 gagtcttagaggtgttgtcatgtcattgcatgagtctt 115682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 129858 - 129924
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||||    
T  129858 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtc 129924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 129672 - 129704
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  129672 atatacacaagtggagtcagttgcataagcata 129704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 97503 - 97570
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  97503 atggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 97570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 101764 - 101874
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||| ||||||||| |||| | ||||||||||||||||| || ||||||||    
T  101764 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccagatgcatagtcgcatat-ttgaggagtcttagtggtgtcgtcatgtc 101861  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  101862 atgcatgagtctt 101874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 239
Target Start/End: Complemental strand, 465 - 298
Alignment:
Q  75 cctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatga--tgaggactcatgtcctgataaaagaatgctttaaccat 172  Q
    |||||||||| ||||||||||||  | || |||||| ||||||||||| |  ||||  |   |||||||||||||||||| |||||||||||||||||||    
T  465 cctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagcggtgtttagcggtgaggactcatgtcctga-aaaagaatgctttaaccat 367  T
Q  173 tcta-taaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    || | ||  | |||| |||||||| |||  ||||||||||||||||||  |||||||||||||||||||    
T  366 tcaattagcggtgagggcttcggccctgaatatggtaccacatgcatatctgcatttgttgaggagtct 298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 43059 - 43124
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgag 266  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||    
T  43059 atggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgag 43124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 120 - 8
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||| ||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  120 gaatgttttaaccattcaaaagcggtgagggcttcggtcctgttttggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 21  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  20 atgcatgagtctt 8  T

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Target: scaffold0076; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 30305 - 30344
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  30305 ttatggtaccacatgcatatttgcatttattgaggagtct 30344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 35706 - 35745
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  35706 ttatggtaccacatgcatatttgcatttattgaggagtct 35745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 103024 - 103157
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| |||||||||  |||||||||||||||||||| | | |  |||| ||| |||| |||  |||||||||||||||||||||||| || | |||    
T  103024 tgaggacttatgtcctga--aaagaatgctttaaccattcgaaagaagtgagggctccggccctgaatatggtaccacatgcatagttgcaattatcgag 103121  T
Q  234 gagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||| || ||||||||||| |||||||||||    
T  103122 gagtcttagaggtgttgtcatgtcattgcatgagtc 103157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 144020 - 143909
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||| |||||| |||||||||| || ||||||||    
T  144020 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatttattgaggggtcttagtggtgtcgtcatgtc 143922  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  143921 atgcatgagtctt 143909  T

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Target: scaffold0107 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 41712 - 41833
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| ||||||||| ||| |||||||||||||||||  ||  |  ||| |||||||| |||  ||||||||||||||||||||||||||||| |||    
T  41712 tgaggacttatgtcctga-aaatgaatgctttaaccattcattagcgg-gagggcttcggccctgaatatggtaccacatgcatagttgcatttgtcgag 41809  T
Q  234 gagtcttagtggagttgtcatgtc 257  Q
    ||||||||| || |||||||||||    
T  41810 gagtcttagaggtgttgtcatgtc 41833  T

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Target: scaffold0352 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 4478 - 4544
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||||||||||| |||||||||||    
T  4478 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtc 4544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 1976 - 1843
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttga 232  Q
    |||||||| |||||||||   | ||||||||||||||||| || |  | |||| |||||||| |||  ||||||||||||||||||||||||||||||||    
T  1976 tgaggacttatgtcctga---atgaatgctttaaccattcaattagcggtgagggcttcggccctgaatatggtaccacatgcatagttgcatttgttga 1880  T
Q  233 ggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||  | || |||||||| |||||||||||    
T  1879 ggagtcttagaagtgtcgtcatgtcattgcatgagtc 1843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 2140 - 2105
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  2140 atatacacaagtggagtcagttgcataagcataaaa 2105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 18339 - 18405
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatg-tcttgcatgagtc 268  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| | |||||||||||    
T  18339 tggtaccacatgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtttttgcatgagtc 18405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 2103 - 1986
Alignment:
Q  154 aaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgt 251  Q
    ||||||||||||||||||||| || |  | |||| ||| |||| |||  ||||||||||||||||||||||||||||| |||||||||||| || | |||    
T  2103 aaaagaatgctttaaccattcgattagcggtgagggctccggccctgaatatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgctgt 2004  T
Q  252 catgtc-ttgcatgagtc 268  Q
    |||||| |||||||||||    
T  2003 catgtcattgcatgagtc 1986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 1193 - 1310
Alignment:
Q  154 aaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgt 251  Q
    ||||||||||||||||||||| || |  | |||| ||| |||| |||  ||||||||||||||||||||||||||||| |||||||||||| || | |||    
T  1193 aaaagaatgctttaaccattcgattagcggtgagggctccggccctgaatatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgctgt 1292  T
Q  252 catgtc-ttgcatgagtc 268  Q
    |||||| |||||||||||    
T  1293 catgtcattgcatgagtc 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 8129 - 8246
Alignment:
Q  154 aaaagaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgt 251  Q
    ||||||||||||||||||||| || |  | |||| ||| |||| |||  ||||||||||||||||||||||||||||| |||||||||||| || | |||    
T  8129 aaaagaatgctttaaccattcgattagcggtgagggctccggccctgaatatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgctgt 8228  T
Q  252 catgtc-ttgcatgagtc 268  Q
    |||||| |||||||||||    
T  8229 catgtcattgcatgagtc 8246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 1037 - 1136
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||| ||||||||||||||||| ||          |||| |||||| |||||||||| ||||||||||||  | || |||||| ||    
T  1037 atatacacaagtggagtcggttgcataagcataaaagcg---------ggagggcttcggccctggaacgccttgtcgttcaaagcggtggaacactttg 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 7973 - 8072
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||||||| ||||||||||||||||| ||          |||| |||||| |||||||||| ||||||||||||  | || |||||| ||    
T  7973 atatacacaagtggagtcggttgcataagcataaaagcg---------ggagggcttcggccctggaacgccttgtcgttcaaagcggtggaacactttg 8063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 236 - 123
Alignment:
Q  158 gaatgctttaaccattctataaa-gatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatg 255  Q
    ||||||||||||||||| || |  | |||| |||||||| |||  ||||||||||||||||||||||||||||||||||||||||||  | || ||||||    
T  236 gaatgctttaaccattcaattagtggtgagggcttcggccctgaatatggtaccacatgcatagttgcatttgttgaggagtcttagaagtgtcgtcatg 137  T
Q  256 tc-ttgcatgagtc 268  Q
    || |||||||||||    
T  136 tcattgcatgagtc 123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 268
Target Start/End: Complemental strand, 10426 - 10292
Alignment:
Q  132 tgatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgtt 230  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||| |  | |||| ||| |||| ||| |||||||||||||||||| | ||   |||||    
T  10426 tgatgaggacttatgtcctga-aaatgaatgctttaaccattctacagcggtgagggctacggccctgattatggtaccacatgcatgggtg---ttgtt 10331  T
Q  231 -gaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
     |||||||||||||||||| || |||| |||||||||||    
T  10330 agaggagtcttagtggagtggtgatgttttgcatgagtc 10292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 11465 - 11540
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||        | ||||||| ||||||||||||||| ||||||||||||    
T  11465 atatacacaagtggagtcagttgcataagcataaaaac--------ggtgaggacctcggtcctggaacgccttgtcgttcaaa 11540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 19565 - 19631
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||| ||||||||||||||||||||| || | ||||||||| |||||||||||    
T  19565 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgatgtcatgtcattgcatgagtc 19631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 28008 - 27942
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||| || ||||||||||||||||||||| || ||||||||||| |||||||||||    
T  28008 tggtaccacatgcattgtcgcatttgttgaggagtcttagaggtgttgtcatgtcattgcatgagtc 27942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 5102 - 5184
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |  | |||| |||||||| ||| ||||||||||||||||||    
T  5102 tgaggactcatgtcctga-aaatgaatgctttaaccattctacagcggtgagggcttcggccctgattatggtaccacatgcat 5184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 52731 - 52836
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttga 232  Q
    ||||||| |||||||||| ||||||||||||||||||||| || |  | |||| |||||||| ||| |||||||||||||||||||   |||||||||||    
T  52731 tgaggacccatgtcctga-aaaagaatgctttaaccattcgattagcggtgagggcttcggccctgattatggtaccacatgcatatcagcatttgttga 52829  T
Q  233 ggagtct 239  Q
    |||||||    
T  52830 ggagtct 52836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 135 - 242
Target Start/End: Complemental strand, 29829 - 29723
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatttgttgag 233  Q
    |||||||| |||||||||| |  ||||||||||||||||| | || | || | | | |||| ||| |||||||||||||||||||||||||||| |||||    
T  29829 tgaggacttatgtcctgatga--gaatgctttaaccattcgacaacggtgtgggttacggccctgattatggtaccacatgcatagttgcatttattgag 29732  T
Q  234 gagtcttag 242  Q
    |||||||||    
T  29731 gagtcttag 29723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 16207 - 16248
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16207 tatggtaccacatgcatagttgcatttgttgaggagtcttag 16248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 15979 - 16014
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||| ||||||||||||||||||||||||||||    
T  15979 atatacaaaagtggagtcagttgcataagcataaaa 16014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 108 - 176
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgt-cttgcatgagtc 268  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||  |||||||||||    
T  108 tatggtaccacatgcatagttgcatttgttcaggagtcttattggtgttgtcctgtaattgcatgagtc 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 7771 - 7661
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| ||||||   ||||||||||||||||| || ||||||||    
T  7771 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcataa-ttgaggagtcttagtggtgtcgtcatgtc 7674  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  7673 atgcatgagtctt 7661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 12918 - 12852
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtctt 270  Q
    |||||||||||||||| || ||| | ||||||||||||||||| || |||||||| ||||||||||||    
T  12918 tggtaccacatgcataattccatat-ttgaggagtcttagtggtgtcgtcatgtcatgcatgagtctt 12852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 17099 - 17151
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtca 253  Q
    ||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  17099 tatggtaccacatgcatagttgcatttgtcgaggagtcttagaggtgttgtca 17151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 25503 - 25447
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  25503 tgcatagtcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 25447  T

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Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 41289 - 41179
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||||  |||||| |||||||||| || ||||||||    
T  41289 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatta-ttgaggggtcttagtggtgtcgtcatgtc 41192  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  41191 atgcatgagtctt 41179  T

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Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 74231 - 74342
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| || ||||||||||||| |||||||  |||||| |||||||||| || ||||||||    
T  74231 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tgataccacatgcataattgcattaattgaggggtcttagtggtgtcgtcatgtc 74329  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  74330 atgcatgagtctt 74342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 5885 - 6128
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||| |||| ||          |||| || ||| |||||||||| ||| ||||||||  | || |||||| ||    
T  5885 atatacacaagtggagtcagttgcataagcacaaaagcg---------ggagggctccggccctggaacgccttgccgttcaaagcggtggaacact-tg 5974  T
Q  114 ttgttcaaaacaatgtta-tgatgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtacca 210  Q
    ||||||||| |  |||||  |||||||||| ||||||||| ||| |||| |||||||||||||| ||  | |||| |||||||| ||| |||||||||||    
T  5975 ttgttcaaagcggtgttagcgatgaggacttatgtcctga-aaatgaattctttaaccattctattagcggtgagggcttcggccctgattatggtacca 6073  T
Q  211 catgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    |||| ||   ||   |||| |||||||||||||||||| ||  ||| |||||||||||    
T  6074 catgtatgagtg---ttgtagaggagtcttagtggagtggttgtgtgttgcatgagtc 6128  T

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Target: scaffold0483 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 11924 - 12055
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    |||||||||||||| ||||||||||||||||||||| || ||        ||| | ||||||||||||||| ||||||||||||  | || |||||||||    
T  11924 atatacacaagtgg-gtcagttgcataagcataaaagcggtg--------agggcctcggtcctggaacgccttgtcgttcaaagcggtggaacactatg 12014  T
Q  114 ttgttcaaaacaatgtta-tgatgaggactcatgtcctgat 153  Q
    ||||||||| |  |||||  | |||||||||||||||||||    
T  12015 ttgttcaaagcggtgttagcggtgaggactcatgtcctgat 12055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 51145 - 51079
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||| ||||||||||||||||||||| || || ||||| || |||||||||||    
T  51145 tggtaccacatgcatagtcgcatttgttgaggagtcttagaggtgtcgtcatatcattgcatgagtc 51079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 51331 - 51299
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||||| |||||||||||||    
T  51331 atatacacaagtggagtcaattgcataagcata 51299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 65404 - 65517
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||| ||||| | |  | |||| |||||||  ||||| |||||||||||| ||| |||||| | |||||||||||||||||  ||||||||||    
T  65404 gaatgctttaaacattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgaataattgcatattttgaggagtcttagtggtattgtcatgtc 65502  T
Q  258 ttgcatgagtcttag 272  Q
     || |||||||||||    
T  65503 atgaatgagtcttag 65517  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 34973 - 34817
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||| |||| ||          |||| || ||| |||||||||| ||||||||||||  | || |||||| ||    
T  34973 atatacacaagtggagtcagttgcataagcacaaaagcg---------ggagggctccggccctggaacgccttgtcgttcaaagcggtggaacactttg 34883  T
Q  114 ttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaagaatgctttaaccattctat 177  Q
    ||||||||| |  ||||    | |||||||| ||||||||| ||| ||||||||||||||||||||    
T  34882 ttgttcaaagcggtgtttagcggtgaggacttatgtcctgaaaaatgaatgctttaaccattctat 34817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 510 - 629
Alignment:
Q  133 gatgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctgt-tatggtaccacatgcatagttgcatttgttg 231  Q
    |||||||||| ||||||||| ||| |||||||||||||||||  ||  |  ||| |||||||| |||  ||||||||||||||||||||||||||||  |    
T  510 gatgaggacttatgtcctga-aaatgaatgctttaaccattcattagcgg-gagggcttcggccctgaatatggtaccacatgcatagttgcatttgccg 607  T
Q  232 aggagtcttagtggagttgtca 253  Q
    ||| ||||||| || |||||||    
T  608 aggggtcttagaggtgttgtca 629  T

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Target: scaffold0634 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 2583 - 2538
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttagtgg 245  Q
    |||||||||||||||||||||||||||| | |||||||||||||||    
T  2583 ttatggtaccacatgcatagttgcatttatcgaggagtcttagtgg 2538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 10419 - 10486
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||||||||||||||||||||||| |||||||||||||  | || |||||||| |||||||||||    
T  10419 tatggtaccacatgcatagttgcatttg-tgaggagtcttagatgtgtcgtcatgtctttgcatgagtc 10486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 13510 - 13593
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||  | |||| |||||||| ||| ||||||||||||||||||    
T  13510 tgaggacttatgtcctga-aaaagaatgctttaaccattctattagcggtgagggcttcggccctgattatggtaccacatgcat 13593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 3405 - 3373
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||| |||||||||||||||    
T  3405 atatacacaagtggagttagttgcataagcata 3373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 5929 - 5873
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||| |||||||||||    
T  5929 tgcatagtcgcaattgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 5873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 5742 - 5707
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  5742 atatacacaagtggagtcagttgcataagcataaaa 5707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 8500 - 8465
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  8500 atatacacaagtggagtcagttgcataagcataaaa 8465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 6836 - 6801
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  6836 atatacacaagtggagtcagttgcataagcataaaa 6801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 57165 - 57200
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  57165 atatacacaagtggagtcagttgcataagcataaaa 57200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 17559 - 17477
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||| ||| ||||||||||||||||||| |  |||||| |||||||| | | ||||||||||||||||||    
T  17559 tgaggacttatgtcctga-aaatgaatgctttaaccattctacagcgatgagggcttcggccccgattatggtaccacatgcat 17477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 141468 - 141433
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  141468 atatacacaagtggagtcagttgcataagcataaaa 141433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 154326 - 154291
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  154326 atatacacaagtggagtcagttgcataagcataaaa 154291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 252082 - 252047
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||||||||    
T  252082 atatacacaagtggagtcagttgcataagcataaaa 252047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 147205 - 147170
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||| ||||||||||||||||    
T  147205 atatacacaagtggagtcatttgcataagcataaaa 147170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 174721 - 174760
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  174721 ttatggtaccacatgcatatttgcatttattgaggagtct 174760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 197421 - 197456
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  197421 atatacacaagtggagtcagttgcataagcacaaaa 197456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 56746 - 56778
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||| |||||||||||||||||||    
T  56746 atatacacaagtgaagtcagttgcataagcata 56778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 75330 - 75298
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||| |||||||||||||||||||    
T  75330 atatacacaagtgcagtcagttgcataagcata 75298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 247078 - 246968
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| ||||||   ||||| | |||||||||||||| |||||||  |||||| |||||||||| || ||||||||    
T  247078 gaatgctttaaccattcaaaagcggtgagggcttcgatcctgttttcgtaccacatgcataattgcatta-ttgaggggtcttagtggtgtcgtcatgtc 246980  T
Q  258 ttgcatgagtct 269  Q
     |||||||||||    
T  246979 atgcatgagtct 246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 253592 - 253482
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||||||||| | |  | |||| ||||||   ||||| | |||||||||||||| |||||||  |||||| |||||||||| || ||||||||    
T  253592 gaatgctttaaccattcaaaagcggtgagggcttcgatcctgttttcgtaccacatgcataattgcatta-ttgaggggtcttagtggtgtcgtcatgtc 253494  T
Q  258 ttgcatgagtct 269  Q
     |||||||||||    
T  253493 atgcatgagtct 253482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 1299 - 1234
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    ||||||||||||||| || ||||| ||||||||||||||| || ||||||||||| |||||||||||    
T  1299 tggtaccacatgcatcgtcgcatt-gttgaggagtcttagaggtgttgtcatgtcattgcatgagtc 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 1485 - 1453
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||||| |||||||||||||    
T  1485 atatacacaagtggagtcaattgcataagcata 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 19184 - 19115
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcat-gtcttgcatgagtcttag 272  Q
    |||||||||||||||| |||||| | ||||||||| ||||||| |||||||| ||| ||||||||||||||    
T  19184 tggtaccacatgcataattgcatattttgaggagt-ttagtggtgttgtcatggtcatgcatgagtcttag 19115  T

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Target: scaffold0104 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 26107 - 26069
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  26107 tatggtaccacatgcatatttgcatttgttgaggagtct 26069  T

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Target: scaffold0104; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 27489 - 27451
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  27489 tatggtaccacatgcatatttgcatttgttgaggagtct 27451  T

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Target: scaffold0104; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 41808 - 41864
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatg-tcttgcatgagtc 268  Q
    |||||||| ||||||||||||||||||||| || ||||||||| | |||||||||||    
T  41808 tgcatagtcgcatttgttgaggagtcttagcggtgttgtcatgttattgcatgagtc 41864  T

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Target: scaffold0575 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 172 - 229
Alignment:
Q  213 tgcatagttgcattt-gttgaggagtcttagtggagttgtcatgtc-ttgcatgagtc 268  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  172 tgcatagtcgcattttgttgaggagtcttagtggtgttgtcatgtcattgcatgagtc 229  T

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Target: scaffold0462 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 9473 - 9526
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc-ttgcatga 265  Q
    |||||| | |||||||||||||||||||||||| ||||||||||| ||||||||    
T  9473 tgcatattcgcatttgttgaggagtcttagtggtgttgtcatgtcattgcatga 9526  T

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Target: scaffold0420 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 10085 - 9993
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtaccacatgcatagttgcatt 226  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||  | ||||  ||||||| |||  |||||||||||||||||| |||||||    
T  10085 tgaggactcatgtcctga-aaaagaatgctttaaccattcgattagcggtgaggacttcggccctgaatatggtaccacatgcatatttgcatt 9993  T

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Target: scaffold0363 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 2072 - 1963
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    ||||||||||| ||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| |  ||||||||| |||||| || ||||||||    
T  2072 gaatgctttaatcattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcataattgcatat--tgaggagtcgtagtggtgtcgtcatgtc 1976  T
Q  258 ttgcatgagtctt 270  Q
     ||||||||||||    
T  1975 atgcatgagtctt 1963  T

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Target: scaffold0206 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 13296 - 13251
Alignment:
Q  192 cggctctgttatggtaccacatgcatagttgcatttgttgaggagt 237  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||    
T  13296 cggccctgatatggtaccacattcatagttgcatttgttgaggagt 13251  T

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Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 44342 - 44245
Alignment:
Q  68 cttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttatgatgaggactcatgtcctgataaaagaatgcttta 167  Q
    ||||||||||||||||| ||||||||||||  | || |||||| ||||||||||| |        | |||||||| ||||||||| ||||||||||||||    
T  44342 cttcggtcctggaacgccttgtcgttcaaagcggtggaacactttgttgttcaaagc--------ggtgaggacttatgtcctga-aaaagaatgcttta 44252  T

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Target: scaffold0077 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 4779 - 4820
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  4779 tatggtaccacatgcatagttgcatttatcgaggagtcttag 4820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 932 - 988
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgt-cttgcatgagtc 268  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||  |||||||||||    
T  932 tgcatagtcgcatttggtgaggagtcttagtggtgttgtcatgtaattgcatgagtc 988  T

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Target: scaffold1299 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 329 - 369
Alignment:
Q  202 atggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  329 atggtaccacatgcataattgcatttgtcgaggagtcttag 369  T

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Target: scaffold0751 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 599 - 567
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  599 atatacacaagtggagtcagttgcataagcata 567  T

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Target: scaffold0751; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 413 - 366
Alignment:
Q  203 tggtaccacatgcatagttgcatttgttgaggagtcttagtggagttgtc 252  Q
    |||||||||||||||   ||||||||| ||||||||||||||||||||||    
T  413 tggtaccacatgcatg--tgcatttgtcgaggagtcttagtggagttgtc 366  T

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Target: scaffold0342 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 16874 - 17071
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||||| |||| ||          |||| ||  || |||||||||| ||||||||||||  | || |||||| ||    
T  16874 atatacacaagtggagtcagttgcataagcacaaaagcg---------ggagggctctggccctggaacgccttgtcgttcaaagcggtggaacactttg 16964  T
Q  114 ttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtacc 209  Q
    ||||||||| |  ||||    | |||||||||||||||||| ||||||||| ||||||||||| | ||  | |||| |||||||| |||  |||||||||    
T  16965 ttgttcaaagcggtgtttagcggtgaggactcatgtcctga-aaaagaatgttttaaccattcgattagcggtgagggcttcggccctgaatatggtacc 17063  T

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Target: scaffold0334 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 8672 - 8640
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  8672 atatacacaagtggagtcagttgcataagcata 8640  T

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Target: scaffold0331 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 18700 - 18668
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  18700 atatacacaagtggagtcagttgcataagcata 18668  T

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Target: scaffold0309 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 20889 - 20845
Alignment:
Q  133 gatgaggactcatgtcctgataaaagaatgctttaaccattctat 177  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||    
T  20889 gatgaggacttatgtcctgaaaaatgaatgctttaaccattctat 20845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 8435 - 8403
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  8435 atatacacaagtggagtcagttgcataagcata 8403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 18519 - 18487
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  18519 atatacacaagtggagtcagttgcataagcata 18487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 27437 - 27405
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  27437 atatacacaagtggagtcagttgcataagcata 27405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 25782 - 25750
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  25782 atatacacaagtggagtcagttgcataagcata 25750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 5107 - 5139
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  5107 atatacacaagtggagtcagttgcataagcata 5139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 47802 - 47834
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  47802 atatacacaagtggagtcagttgcataagcata 47834  T

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Target: scaffold0097 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 27944 - 27861
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaa-gatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||||||||||||| ||| ||||||||||||||||| || |  | |||| |||||||| ||| ||||||||||||||||||    
T  27944 tgaggactcatgtcctga-aaatgaatgctttaaccattcaattagcggtgagggcttcggccctgattatggtaccacatgcat 27861  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 3068 - 3036
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  3068 atatacacaagtggagtcagttgcataagcata 3036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 27803 - 27945
Alignment:
Q  76 ctggaacgctttgtcgttcaaaatgatgaaacactatgttgttcaaaacaatgttat-gatgaggactcatgtcctgataaaagaatgctttaaccattc 174  Q
    ||||||||  |||||||||||| || || ||||| | |||||||||| |  |||||  |||||||||| ||||||| |||||||||||||||||||||||    
T  27803 ctggaacggcttgtcgttcaaagtggtggaacacga-gttgttcaaagcggtgttagcgatgaggacttatgtcct-ataaaagaatgctttaaccattc 27900  T
Q  175 -tataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
      |||  | |||| ||| |||| ||| ||||||||||||||||||    
T  27901 gaatagcggtgagggctccggccctgattatggtaccacatgcat 27945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 10643 - 10611
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  10643 atatacacaagtggagtcagttgcataagcata 10611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 65165 - 65133
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  65165 atatacacaagtggagtcagttgcataagcata 65133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 47139 - 47178
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  47139 ttatggtaccacatgcatatttgcatttattgaggagtct 47178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 52544 - 52583
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  52544 ttatggtaccacatgcatatttgcatttattgaggagtct 52583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 76915 - 76883
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||||||||    
T  76915 atatacacaagtggagtcagttgcataagcata 76883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 15620 - 15658
Alignment:
Q  204 ggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  15620 ggtaccacatgcatagttgcatttatagaggagtcttag 15658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 3310 - 3345
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3310 atatacacaagtggagtcagttgcataagcacaaaa 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 3279 - 3314
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3279 atatacacaagcggagtcagttgcataagcataaaa 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 16029 - 16064
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16029 atatacacaagtggagtcagttgcataagcacaaaa 16064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 268
Target Start/End: Original strand, 8009 - 8254
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaacgatgttatgatgaggacttcggtcctggaacgctttgtcgttcaaaatgatgaaacactatg 113  Q
    ||||||||||||||||||||||||||||| | |||| ||          |||| || ||| |||||||| | ||||||||||||  | || |||||| ||    
T  8009 atatacacaagtggagtcagttgcataaggacaaaagcg---------ggagggctccggccctggaactccttgtcgttcaaagcggtggaacactttg 8099  T
Q  114 ttgttcaaaacaatgtt--atgatgaggactcatgtcctgataaaagaatgctttaaccattcta-taaagatgagagcttcggctctg-ttatggtacc 209  Q
    ||||||||| |  ||||    | ||||||||||||||||   ||||||||||||||||||||| | ||  | |||||||| | || |||  |||||||||    
T  8100 ttgttcaaagcggtgtttagcggtgaggactcatgtcct--aaaaagaatgctttaaccattcgattagcggtgagagctcctgccctgaatatggtacc 8197  T
Q  210 acatgcatagttgcatttgttgaggagtcttagtggagttgtcatgtcttgcatgagtc 268  Q
    ||||||||    |||||||| ||||||||||||||||| |||   || |||||||||||    
T  8198 acatgcat--gagcatttgtagaggagtcttagtggaggtgttgagtgttgcatgagtc 8254  T

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Target: scaffold0243; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 12315 - 12343
Alignment:
Q  14 atatacacaagtggagtcagttgcataag 42  Q
    |||||||||||||||||||||||||||||    
T  12315 atatacacaagtggagtcagttgcataag 12343  T

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Target: scaffold0106 (Bit Score: 32; Significance: 0.000000008; HSPs: 4)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 38418 - 38379
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  38418 ttatggtaccacatgcatatttgcatttattgaggagtct 38379  T

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Target: scaffold0106; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 46740 - 46775
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  46740 atatacacaagtggagtcagttgcataagcacaaaa 46775  T

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Target: scaffold0106; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 51013 - 51048
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  51013 atatacacaagtggagtcagttgcataagcacaaaa 51048  T

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Target: scaffold0106; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 28795 - 28763
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||||| |||||||||||||    
T  28795 atatacacaagtggagtcaattgcataagcata 28763  T

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Target: scaffold0067 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 47507 - 47589
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||| ||||||||||||||||||||| | || | |||| ||| |||  ||| ||||||||||||||||||    
T  47507 tgaggacttatgtcctga-aaaagaatgctttaaccattcgacaacggtgagggctacggtcctgattatggtaccacatgcat 47589  T

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Target: scaffold0067; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 56541 - 56623
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||| ||||||||||||||||||||| | || | |||| ||| |||  ||| ||||||||||||||||||    
T  56541 tgaggacttatgtcctga-aaaagaatgctttaaccattcgacaacggtgagggctacggtcctgattatggtaccacatgcat 56623  T

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Target: scaffold0067; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 62927 - 63009
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattctataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| ||||||||| ||||||||||||||||||||| | || | |||| ||| |||  ||| ||||||||||||||||||    
T  62927 tgaggacttatgtcctga-aaaagaatgctttaaccattcgacaacggtgagggctacggtcctgattatggtaccacatgcat 63009  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 174
Target Start/End: Original strand, 156861 - 156899
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattc 174  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  156861 tgaggactcatgtcctga-aaaagaatgctttaaccattc 156899  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 38648 - 38683
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||| |||||||||||||||||||||||||||    
T  38648 atatacacgagtggagtcagttgcataagcataaaa 38683  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 136708 - 136743
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaa 49  Q
    |||||||| |||||||||||||||||||||||||||    
T  136708 atatacacgagtggagtcagttgcataagcataaaa 136743  T

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Target: scaffold0811 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 114 - 156
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  114 ttatggtaccacatgcatatttgcatttattgaggagtattag 156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 9792 - 9834
Alignment:
Q  200 ttatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||    
T  9792 ttatggtaccacatgcataattgcatttattgaggagtattag 9834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 4460 - 4501
Alignment:
Q  201 tatggtaccacatgcatagttgcatttgttgaggagtcttag 242  Q
    ||||||||| ||||||||||||||||| | ||||||||||||    
T  4460 tatggtaccgcatgcatagttgcatttatcgaggagtcttag 4501  T

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Target: scaffold0266 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 15160 - 15080
Alignment:
Q  158 gaatgctttaaccattctataaagatgagagcttcggctctgttatggtaccacatgcatagttgcatttgttgaggagtct 239  Q
    ||||||||||||||||| | |  | |||| |||||||  ||||| |||||||||||||||| |||||| | |||||||||||    
T  15160 gaatgctttaaccattcaaaagcggtgagggcttcggtcctgtt-tggtaccacatgcatatttgcatctattgaggagtct 15080  T

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Target: scaffold0790 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 4417 - 4374
Alignment:
Q  213 tgcatagttgcatttgttgaggagtcttagtggagttgtcatgtc 257  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||    
T  4417 tgcatagtcgcatt-gttgaggagtcttagtggtgttgtcatgtc 4374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 4988 - 5020
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||||||||||||| ||||    
T  4988 atatacacaagtggagtcagttgcataaacata 5020  T

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Target: scaffold0377 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 7336 - 7253
Alignment:
Q  135 tgaggactcatgtcctgataaaagaatgctttaaccattc-tataaagatgagagcttcggctctg-ttatggtaccacatgcat 217  Q
    |||||||| | |||||| |||||||||||||||||||||| ||||  | |||| ||| |||| ||| ||||||||||||||||||    
T  7336 tgaggacttaggtcctg-taaaagaatgctttaaccattcgtatagcggtgagggctccggccctgattatggtaccacatgcat 7253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 7135 - 7099
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcataaaaa 50  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  7135 atatacacaagtggagtcagttgtataaccataaaaa 7099  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 9436 - 9404
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||| |||||||||||||||||    
T  9436 atatacacaagtggattcagttgcataagcata 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 44780 - 44748
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    |||||||||||||||||| ||||||||||||||    
T  44780 atatacacaagtggagtccgttgcataagcata 44748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 24637 - 24593
Alignment:
Q  228 gttgaggagtcttagtggagttgtcatgtcttgcatgagtcttag 272  Q
    |||||||||||||||||| || || ||||| ||||||||||||||    
T  24637 gttgaggagtcttagtggtgtggttatgtcatgcatgagtcttag 24593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 17409 - 17441
Alignment:
Q  14 atatacacaagtggagtcagttgcataagcata 46  Q
    ||||||||||||||||| |||||||||||||||    
T  17409 atatacacaagtggagttagttgcataagcata 17441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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