View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16068_high_15 (Length: 553)
Name: NF16068_high_15
Description: NF16068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16068_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 533; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 533; E-Value: 0
Query Start/End: Original strand, 1 - 537
Target Start/End: Complemental strand, 25597084 - 25596548
Alignment:
| Q |
1 |
ttttcagcagtgctaaattgatcaagttgattcaagtcagtccgttttgaaaacattggtaagtgttgttgacagaaagctttcaaatccttgacagcca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25597084 |
ttttcagcagtgctaaattgatcaagttgattcaagtcagtccgttttgaaaacattggtaagtgttgttgacagaaagctttcaaatccttgacagcca |
25596985 |
T |
|
| Q |
101 |
agtcaccgccgtactccaccagagaacccttttcattctctttgtaagaataaacaaaaagccttggacctttgcgcggatatacgccgagctccttaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25596984 |
agtcaccgccgtactccaccagagaacccttttcattctctttgtaagaataaacaaaaagccttggacctttgcgcggatatacgccgagctccttaca |
25596885 |
T |
|
| Q |
201 |
gaatgagacttccttttcacagttaatgcttccaacctgtcaaaagaggagagagacaataagtcatgccaactgcagaacaatcaatagaaatgattta |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
25596884 |
gaatgagacttccttttcacagttaatgcttccaacctgtcaaaagaggagagagacaataagtcatgccaactgcaaaacaatcaatagaaatgattta |
25596785 |
T |
|
| Q |
301 |
agtttaaaaaataaatagaaaccttcaaagctccttgcagtgtaccagcaacctcccctataatggactcaaagtgttggatgcccctcaaagagggtga |
400 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25596784 |
agtttaaaaaataaatagaaaccttcaaagctccttgcagtgtaccagcaacctcccctataatggactcaaagtgttggatgcccctcaaagagggtga |
25596685 |
T |
|
| Q |
401 |
ataagataacaaaagccaagtcattccttcatcgactatttctttgttatagatatttgaatttatggccttaaaacttttgggggaactcttggaccca |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25596684 |
ataagataacaaaagccaagtcattccttcatcgactatttctttgttatagatatttgaatttatggccttaaaacttttgggggaactcttggaccca |
25596585 |
T |
|
| Q |
501 |
gattgagatgattgagacctaaatgaactgccaaaat |
537 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
25596584 |
gattgagatgattgagacctaaatgaactgccaaaat |
25596548 |
T |
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