View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16068_high_5 (Length: 700)
Name: NF16068_high_5
Description: NF16068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16068_high_5 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 489; Significance: 0; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 20 - 692
Target Start/End: Original strand, 8102540 - 8103212
Alignment:
| Q |
20 |
aagttcctcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagttgatgagagagtt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8102540 |
aagttcctcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcggttgatgagagagtt |
8102639 |
T |
|
| Q |
120 |
ctcttcgctctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggt |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8102640 |
ctcttcgctctctcacatgcggttctcaatctcctaagtgccctagggtttccgctaatatccttcttgttcttcctcttaaactcttgaacaaaatggg |
8102739 |
T |
|
| Q |
220 |
taaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatc |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
8102740 |
taaccattctgttatcaaaatcttcaccaccaagatgggtatcacctgcagtagccttaacttcaaatataccctcttcaatagtaagaagtgacacatc |
8102839 |
T |
|
| Q |
320 |
aaaagtcccacctcccaaatcaaagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaagaccgtatgcaatagcagcagcagttggctcg |
419 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8102840 |
aaaagtaccaccacccaaatcaaagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaagaccgtaggcaatagcagcagcagttggctca |
8102939 |
T |
|
| Q |
420 |
ttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcat |
519 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || || |||| |
|
|
| T |
8102940 |
ttaataattctcaaaacatttaaaccagcgataacaccagcatctttagttgcttgacgctgagaatcattgaagtaagcagggacagtgacgacggcat |
8103039 |
T |
|
| Q |
520 |
tcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcaccctt |
619 |
Q |
| |
|
|||| | || ||| ||||||||||| |||||||| |||||||| || | ||||| || || |||||||||| ||||| | || ||||||||||| |
|
|
| T |
8103040 |
tcttaatggtgacaccaagataagcttcggcaatctcacgcatcttaatcaaaaccatggatgagatttcctcagacgcaaacagtttttcctcaccctt |
8103139 |
T |
|
| Q |
620 |
atagttaacaccaatcattggcttttcaccaggaccagcaatgaccttaaaaggccatagcttcatctcactc |
692 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | |||||| |||||| |
|
|
| T |
8103140 |
gtagttaacaccaatcattggcttttcaccaggacccgcaataaccttaaaaggccacaacttcatgtcactc |
8103212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 20 - 692
Target Start/End: Complemental strand, 8017708 - 8017036
Alignment:
| Q |
20 |
aagttcctcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagttgatgagagagtt |
119 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
8017708 |
aagttcctcaaatcttgcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagtagaagagagagtt |
8017609 |
T |
|
| Q |
120 |
ctcttcgctctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggt |
219 |
Q |
| |
|
||||||||||||||||| || || ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
8017608 |
ctcttcgctctctcacaagctgtcctcaacctcctaagtgctctagggtttccactaatatccttcttgttcttcctcttaaactcctgaacaaaatgat |
8017509 |
T |
|
| Q |
220 |
taaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatc |
319 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8017508 |
taaccattctgttgtcaaaatcttcaccaccaagatgggtatcaccagcagtagccttaacttcaaaaataccctcttcaatagtaagaagagacacatc |
8017409 |
T |
|
| Q |
320 |
aaaagtcccacctcccaaatcaaagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaagaccgtatgcaatagcagcagcagttggctcg |
419 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||||||| |
|
|
| T |
8017408 |
aaaagtaccacctcccaagtcaaagatcaacacattcttctcgccaacacttgtagcctttttgtcaagtccgtacgcaatagctgcagctgttggctcg |
8017309 |
T |
|
| Q |
420 |
ttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcat |
519 |
Q |
| |
|
|| ||||||||||||||||| | || || || ||||| ||||| || || |||||||| || ||||| ||||||||||| || || |||||||| |||| |
|
|
| T |
8017308 |
ttgataattctcaaaacattgagtcctgcaatgacaccggcatcctttgtggcttgacgctgcgaatcattgaagtaagctggaactgtaacaacggcat |
8017209 |
T |
|
| Q |
520 |
tcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcaccctt |
619 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8017208 |
tcttcacagttgaaccgaggtaagcttcagcaatctcacgcatctttatgagtaccatagacgaaatttcctcagcagcaaattgcttgtcctcaccctt |
8017109 |
T |
|
| Q |
620 |
atagttaacaccaatcattggcttttcaccaggaccagcaatgaccttaaaaggccatagcttcatctcactc |
692 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||| |
|
|
| T |
8017108 |
gtagttaacaccaatcattggcttttcaccaggaccagcaataaccttaaaaggccacaacttcatgtcactc |
8017036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 24 - 692
Target Start/End: Original strand, 39985523 - 39986191
Alignment:
| Q |
24 |
tcctcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagttgatgagagagttctct |
123 |
Q |
| |
|
||||||||||| ||||| || || | || ||| ||||||| || ||||| | ||||||||| |||||||| || || ||||| || ||||||||||||| |
|
|
| T |
39985523 |
tcctcaaatcttgcacgagtaatgggggagtagaaatcaattccttcaaaaagagaatcaatttcaatggtggtctgggcagtagaagagagagttctct |
39985622 |
T |
|
| Q |
124 |
tcgctctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaac |
223 |
Q |
| |
|
||||||| ||||| || || ||||| |||||||| || || ||||| ||||| || |||||||||||||| ||||| |||||||||||||| ||||| || |
|
|
| T |
39985623 |
tcgctctttcacaagcagtcctcaacctcctaagagctctggggttgccactgatgtccttcttgttctttctcttgaactcttgaacaaagtggttcac |
39985722 |
T |
|
| Q |
224 |
cattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaa |
323 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||||||| || || || ||||| || || ||||| ||||||||||||||||| || | ||| ||||||||| |
|
|
| T |
39985723 |
cattctgttgtcaaaatcctcacctccaagatgggtgtctccggctgtggctttcacctcaaagataccctcttcaatagttagcaaagagacatcaaaa |
39985822 |
T |
|
| Q |
324 |
gtcccacctcccaaatcaaagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaagaccgtatgcaatagcagcagcagttggctcgttaa |
423 |
Q |
| |
|
|| ||||| || | ||||||||||| || |||||||| |||||||| || || || ||||||||||| || ||||| ||||||||||| ||||| || | |
|
|
| T |
39985823 |
gtaccaccaccaaggtcaaagatcaagacattcttctctccaacactggttgctttcttgtcaagaccataagcaatggcagcagcagtgggctcattga |
39985922 |
T |
|
| Q |
424 |
taattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattctt |
523 |
Q |
| |
|
|||||| || ||||| | ||| || ||||| |||||||| || || |||||||| || || || || |||||||||||||||||||||||||||||||| |
|
|
| T |
39985923 |
taattcgcatgacattaagaccggcaataactccagcatccttggtagcttgacgctgggagtcattaaagtaagcagggacagtaacaacagcattctt |
39986022 |
T |
|
| Q |
524 |
cacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcacccttatag |
623 |
Q |
| |
|
| | ||||| || || ||||| |||||||| |||||||| ||||||||||| || || || || || |||||||||| ||| || ||||| || ||| |
|
|
| T |
39986023 |
aatggcagaaccaaggtacgcttcggcaatctcacgcatcttcattagcaccatggaagagatctcttcggcagcaaattccttatcttcacctttgtag |
39986122 |
T |
|
| Q |
624 |
ttaacaccaatcattggcttttcaccaggaccagcaatgaccttaaaaggccatagcttcatctcactc |
692 |
Q |
| |
|
||||||||||| | |||||||||| | || |||| ||| | |||||||||||| | |||||| |||||| |
|
|
| T |
39986123 |
ttaacaccaataagtggcttttcagctggcccagaaataatcttaaaaggccacaacttcatgtcactc |
39986191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 454 - 676
Target Start/End: Complemental strand, 8636204 - 8635982
Alignment:
| Q |
454 |
caccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaat |
553 |
Q |
| |
|
||||||||||||| || | || ||| |||||||| ||||| ||||| || ||||||| || |||||||| |||| ||| | ||||| || |||||||| |
|
|
| T |
8636204 |
caccagcatctttggtggatttacgctgagaatcattgaaataagcgggcacagtaatgactgcattcttgacagatgattccagatatgcctcagcaat |
8636105 |
T |
|
| Q |
554 |
ctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaacaccaatcattggcttttcaccagga |
653 |
Q |
| |
|
||||||||||||| | || ||||||||||| |||||||||| | || |||||| | |||||||| || || ||| ||||||| || || ||| || || |
|
|
| T |
8636104 |
ctctcgcatctttgtcaggaccatagacgatatttcctcaggaaaaagttgcttttgttcacccttgtatttcacaacaatcatgggtttgtcatcacga |
8636005 |
T |
|
| Q |
654 |
ccagcaatgaccttaaaaggcca |
676 |
Q |
| |
|
|||||||| |||||||| ||||| |
|
|
| T |
8636004 |
ccagcaattaccttaaagggcca |
8635982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 444 - 592
Target Start/End: Complemental strand, 10494245 - 10494097
Alignment:
| Q |
444 |
ccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataag |
543 |
Q |
| |
|
||||| ||| |||||||||| |||| || | ||||||||||||||||||||||| || |||||||||||||||||||| || | ||| || | ||| | |
|
|
| T |
10494245 |
ccagcaatagcaccagcatcaatagtagcctttcgttgagaatcgttgaagtaagccggcacagtaacaacagcattcttgactggtgaccccaaatatg |
10494146 |
T |
|
| Q |
544 |
cttcagcaatctctcgcatctttattagcaccatagacgaaatttcctc |
592 |
Q |
| |
|
| || |||| ||||||||||||||| || |||||||| || |||||||| |
|
|
| T |
10494145 |
cctctgcaacctctcgcatctttataaggaccatagatgatatttcctc |
10494097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 592
Target Start/End: Original strand, 17268185 - 17268384
Alignment:
| Q |
393 |
tatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttga |
492 |
Q |
| |
|
||||||||||| ||||||||||| || || || | |||| ||||| | ||||| || |||||||||||| | || |||| || ||||||||||||| |
|
|
| T |
17268185 |
tatgcaatagctgcagcagttggttcattgattaccttcaatacattaaggccagcaatgacaccagcatctatggtggcttttcgctgagaatcgttga |
17268284 |
T |
|
| Q |
493 |
agtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctc |
592 |
Q |
| |
|
||||||| |||||||||| ||||||||| | || | ||| | ||||| | ||||||||||| ||||||||| | || |||||||||||||||||||| |
|
|
| T |
17268285 |
agtaagccgggacagtaatgacagcattcataaccgatgattctagatattcctcagcaatctcccgcatctttgtgagtaccatagacgaaatttcctc |
17268384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 271
Target Start/End: Complemental strand, 7877919 - 7877777
Alignment:
| Q |
129 |
ctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattc |
228 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| |||||||||| ||| ||| || ||||||||||||||||| || |||||||| | ||||| |
|
|
| T |
7877919 |
ctctcacatgcagttctcaacctcctaagggccctcgggtttccaccaatgtccactttattcttcctcttaaactccatcactaaatggttcaacattc |
7877820 |
T |
|
| Q |
229 |
tgttatcaaaatcttcaccaccaagatgggtatcaccagcagt |
271 |
Q |
| |
|
|||||||||| || || ||||| || || ||||| || ||||| |
|
|
| T |
7877819 |
tgttatcaaagtcctctccacctaggtgagtatctccggcagt |
7877777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 480 - 629
Target Start/End: Original strand, 8667752 - 8667901
Alignment:
| Q |
480 |
tgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatag |
579 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| |||||||| || | || || ||||| || || |||| ||||||||||||| | |||||||||| |
|
|
| T |
8667752 |
tgagaatcattgaagtaagctggcacagtaacaacggcattcttgaccggcgaccccagatatgcctccgcaacctctcgcatctttgtaagcaccatag |
8667851 |
T |
|
| Q |
580 |
acgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaaca |
629 |
Q |
| |
|
| || |||||||||||| ||| ||||| || | |||||| || |||||| |
|
|
| T |
8667852 |
aagatatttcctcagcacaaaagtgcttctcttgacccttgtacttaaca |
8667901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 607
Target Start/End: Complemental strand, 8671465 - 8671338
Alignment:
| Q |
480 |
tgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatag |
579 |
Q |
| |
|
|||||||| ||||||||||| || || |||||||| |||||||| || | ||| | ||||| || || |||| ||||||||||||| | |||||||||| |
|
|
| T |
8671465 |
tgagaatcattgaagtaagctggcacggtaacaacggcattcttgaccggtgactccagatatgcctccgcaacctctcgcatctttgtaagcaccatag |
8671366 |
T |
|
| Q |
580 |
acgaaatttcctcagcagcaaattgctt |
607 |
Q |
| |
|
| || |||||||||||| ||||||||| |
|
|
| T |
8671365 |
aagatatttcctcagcacaaaattgctt |
8671338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 331
Target Start/End: Original strand, 8628609 - 8628716
Alignment:
| Q |
224 |
cattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaa |
323 |
Q |
| |
|
||||||||||||||| || || |||||||| || |||| ||||||||||| ||||||||||| | | | ||| ||| || || ||||||||||||||| |
|
|
| T |
8628609 |
cattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaa |
8628708 |
T |
|
| Q |
324 |
gtcccacc |
331 |
Q |
| |
|
|||||||| |
|
|
| T |
8628709 |
gtcccacc |
8628716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 592
Target Start/End: Complemental strand, 13333291 - 13333179
Alignment:
| Q |
480 |
tgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatag |
579 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| |||||||| || | ||| || | ||| || || |||| ||||||||||||| | || ||||||| |
|
|
| T |
13333291 |
tgagaatcattgaagtaagccggcacagtaacaacggcattcttgactggtgaccccatatatgcctctgcaacctctcgcatctttgtaaggaccatag |
13333192 |
T |
|
| Q |
580 |
acgaaatttcctc |
592 |
Q |
| |
|
| || |||||||| |
|
|
| T |
13333191 |
atgatatttcctc |
13333179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 29577801 - 29577641
Alignment:
| Q |
186 |
ttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaa |
285 |
Q |
| |
|
|||||||||||||| ||||| | ||||| ||| | |||||| | ||||| || || || || || || || |||||||||||||||||||| ||||||| |
|
|
| T |
29577801 |
ttgttcttcctcttcaactcattcacaaagtggctcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggcctttacttcaa |
29577702 |
T |
|
| Q |
286 |
aaataccctcttcaatagtaagaagagacacatcaaaagtcccacctcccaaatcaaagat |
346 |
Q |
| |
|
|| || | || | || || ||||||||||||||||| || ||||| || | ||||||||| |
|
|
| T |
29577701 |
aactatcatccttaagtgtgagaagagacacatcaaaggtgccaccaccaagatcaaagat |
29577641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 3147420 - 3147463
Alignment:
| Q |
303 |
gtaagaagagacacatcaaaagtcccacctcccaaatcaaagat |
346 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
3147420 |
gtaagaagagacacatcaaaagtcccaccacccaagtcaaagat |
3147463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 352
Target Start/End: Original strand, 8590620 - 8590843
Alignment:
| Q |
129 |
ctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattc |
228 |
Q |
| |
|
|||||||| || ||| |||| |||||||| ||||| | ||| ||||| | |||| || ||||||||| ||||||| | || ||||||| |||||||| |
|
|
| T |
8590620 |
ctctcacaagctgttttcaacctcctaagagcccttgcgttcccacttaaatccactttattcttcctcctaaactccttcaccaaatggtgaaccattc |
8590719 |
T |
|
| Q |
229 |
tgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtccc |
328 |
Q |
| |
|
|||||||||| || || || || || |||||||| || | |||||| || || ||||| || | ||| | || |||||||||||||||||||| || |
|
|
| T |
8590720 |
tgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttacatcaaagctatcacctttgagtgtgagaagagacacatcaaaagtgcc |
8590819 |
T |
|
| Q |
329 |
acctcccaaatcaaagatcaacac |
352 |
Q |
| |
|
||| || | ||||||||| ||||| |
|
|
| T |
8590820 |
accaccaagatcaaagatgaacac |
8590843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 528
Target Start/End: Complemental strand, 7877594 - 7877520
Alignment:
| Q |
454 |
caccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacag |
528 |
Q |
| |
|
||||||||||||| || |||| ||||||||||| ||||| ||||| || ||||||||||| |||||||| |||| |
|
|
| T |
7877594 |
caccagcatcttttgtggcttttcgttgagaatcattgaaataagccggcacagtaacaactgcattcttgacag |
7877520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 331
Target Start/End: Original strand, 8545659 - 8545817
Alignment:
| Q |
173 |
actaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtg |
272 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| | ||||| | || ||||||||||||||||| |||||||| || || | || || ||||||||| |
|
|
| T |
8545659 |
actaatatcctcattgttcttcctcttgaactccttcacaaagtaattcaccattctgttatcaaagtcttcaccgcctaggtaagtgtctccagcagtg |
8545758 |
T |
|
| Q |
273 |
gccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtcccacc |
331 |
Q |
| |
|
||||| || ||||| | | || ||| ||||||| ||||||||||||||| ||||| |
|
|
| T |
8545759 |
gccttgacatcaaagaccttatttttaattgtaagaatagacacatcaaaagttccacc |
8545817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 629
Target Start/End: Original strand, 8590926 - 8591120
Alignment:
| Q |
435 |
acattcaaaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaac |
534 |
Q |
| |
|
|||||||| ||||| || |||||||||||||| || |||| | |||||||| || || ||||| || ||||||||||| |||||||| |||| ||| |
|
|
| T |
8590926 |
acattcaagccagcaatgacaccagcatctttggtagctttcctctgagaatcattaaaataagctggcacagtaacaactgcattcttgacaggtgact |
8591025 |
T |
|
| Q |
535 |
cgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaaca |
629 |
Q |
| |
|
| | | | |||||||||||||||||||||| | || ||||| || || |||||||| ||| || |||| ||||||||||| || |||||| |
|
|
| T |
8591026 |
ccaaaaacttttcagcaatctctcgcatctttgtgagaaccatggatgagatttcctccgcacaaagacgcttttcctcacccttgtacttaaca |
8591120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 520
Target Start/End: Original strand, 6789749 - 6789885
Alignment:
| Q |
384 |
tcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgag |
483 |
Q |
| |
|
||||| || ||||||| ||||||||| ||||| || || || |||| | |||||| | |||||| || ||||||||||| ||| |||| ||||||| |
|
|
| T |
6789749 |
tcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatctaaagtggctttccgttgag |
6789848 |
T |
|
| Q |
484 |
aatcgttgaagtaagcagggacagtaacaacagcatt |
520 |
Q |
| |
|
|||| ||||| |||||||| ||||||| ||| ||||| |
|
|
| T |
6789849 |
aatcattgaaataagcaggcacagtaataactgcatt |
6789885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 8570388 - 8570448
Alignment:
| Q |
224 |
cattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttca |
284 |
Q |
| |
|
|||||||||||||||||||||||| || || || || || |||||||||||||| |||||| |
|
|
| T |
8570388 |
cattctgttatcaaaatcttcacctcccaggtgagtgtctccagcagtggccttgacttca |
8570448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 629
Target Start/End: Original strand, 8602220 - 8602456
Alignment:
| Q |
393 |
tatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttga |
492 |
Q |
| |
|
||||||| |||||| ||||||||||| || || || | || ||||| | |||||| || ||||||||||||| || |||| || |||||||| || | |
|
|
| T |
8602220 |
tatgcaagagcagctgcagttggctcattgattatccgcattacattgagaccagcaatggcaccagcatcttttgtggcttttcgctgagaatcattaa |
8602319 |
T |
|
| Q |
493 |
agtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctc |
592 |
Q |
| |
|
| ||||| || ||||||||||| |||||||| |||| ||| | ||| | || ||||| || ||||||||| | || ||||| || || |||||||| |
|
|
| T |
8602320 |
aataagccggcacagtaacaactgcattcttgacaggtgactccagaaacttctctgcaatttcacgcatctttgtaaggaccattgatgagatttcctc |
8602419 |
T |
|
| Q |
593 |
agcagcaaattgcttgtcctcacccttatagttaaca |
629 |
Q |
| |
|
|||| || ||||| ||| |||||||||| |||||| |
|
|
| T |
8602420 |
agcacagaagtgcttttccccacccttatacttaaca |
8602456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 592
Target Start/End: Original strand, 17260538 - 17260686
Alignment:
| Q |
444 |
ccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataag |
543 |
Q |
| |
|
||||| ||||||||||||||| | || |||| || |||||||| ||||| |||||||| ||||||| |||| |||| | || | ||| | ||||| |
|
|
| T |
17260538 |
ccagcaataacaccagcatctatggtggcttttcgctgagaatcattgaaataagcaggaacagtaataacaacattaataaccgatgattcaagatata |
17260637 |
T |
|
| Q |
544 |
cttcagcaatctctcgcatctttattagcaccatagacgaaatttcctc |
592 |
Q |
| |
|
| ||||||||||| |||||||| | || ||||||||||| |||||||| |
|
|
| T |
17260638 |
cctcagcaatctcccgcatcttcacaagtaccatagacgagatttcctc |
17260686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 8581775 - 8581837
Alignment:
| Q |
222 |
accattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttca |
284 |
Q |
| |
|
||||||||||||||||||||||| || || || || || || |||||||||||||| |||||| |
|
|
| T |
8581775 |
accattctgttatcaaaatcttcccctcccaggtgagtgtctccagcagtggccttgacttca |
8581837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 643
Target Start/End: Original strand, 6789911 - 6790008
Alignment:
| Q |
546 |
tcagcaatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaacaccaatcattggctt |
643 |
Q |
| |
|
||||||||||| |||||||| | || | ||||||||||| ||||||| || | |||||| |||||||||||||| | |||| ||||||| ||||| |
|
|
| T |
6789911 |
tcagcaatctcccgcatcttggtgaggatcatagacgaaacttcctcaacacatagttgcttctcctcacccttatactcaacaacaatcatgggctt |
6790008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 331
Target Start/End: Complemental strand, 8585835 - 8585690
Alignment:
| Q |
186 |
ttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaa |
285 |
Q |
| |
|
|||||||| |||||||| || | |||||| | ||| | ||||||||||||||| || | || ||||| || |||| ||||| || || |||||||||| |
|
|
| T |
8585835 |
ttgttctttctcttaaattcctcaacaaagtagttcaacattctgttatcaaagtcccctcccccaaggtgagtatttccagcggttgctttaacttcaa |
8585736 |
T |
|
| Q |
286 |
aaataccctcttcaatagtaagaagagacacatcaaaagtcccacc |
331 |
Q |
| |
|
| | | | ||| ||| || || ||||||||||||||||||||||| |
|
|
| T |
8585735 |
agacatcacctttaattgtgaggagagacacatcaaaagtcccacc |
8585690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 607
Target Start/End: Original strand, 8654757 - 8654910
Alignment:
| Q |
454 |
caccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaat |
553 |
Q |
| |
|
||||||||||| | ||||||| || ||||| || |||||||| || || ||||||||||| |||| || || | ||| || || || || || ||||| |
|
|
| T |
8654757 |
caccagcatctatggttgcttttcgctgagagtcattgaagtatgccggcacagtaacaacgacatttttgacgggtgatccaaggtatgcctctgcaat |
8654856 |
T |
|
| Q |
554 |
ctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgctt |
607 |
Q |
| |
|
||||||||||||| | || ||| ||| || |||||||||||| ||||||||| |
|
|
| T |
8654857 |
ctctcgcatctttgtaagaaccgcagatgatatttcctcagcacaaaattgctt |
8654910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 3147569 - 3147653
Alignment:
| Q |
444 |
ccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacag |
528 |
Q |
| |
|
||||| ||||||||||||||| | || |||| || |||| ||| ||||| |||||||| || |||||||| |||||||| |||| |
|
|
| T |
3147569 |
ccagcaataacaccagcatctattgtcgctttccgctgagcatcattgaaataagcaggtacggtaacaactgcattcttgacag |
3147653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 8383026 - 8382914
Alignment:
| Q |
165 |
gggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcac |
264 |
Q |
| |
|
||||| |||||||| ||||| || | ||||||||| ||||| | |||||| | || || ||||||||||| || |||||||| || ||||| || || | |
|
|
| T |
8383026 |
gggttcccactaatgtccttattatgcttcctcttgaactcgtcaacaaagtacttcacgattctgttatctaagtcttcacctcctagatgagtgtctc |
8382927 |
T |
|
| Q |
265 |
cagcagtggcctt |
277 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
8382926 |
cggcagtggcctt |
8382914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 8559372 - 8559424
Alignment:
| Q |
186 |
ttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaa |
238 |
Q |
| |
|
||||||||||||| |||||||| ||||| || || ||||||||||||||||| |
|
|
| T |
8559372 |
ttgttcttcctctcaaactcttttacaaagtgtttcaccattctgttatcaaa |
8559424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 480 - 528
Target Start/End: Original strand, 8659696 - 8659744
Alignment:
| Q |
480 |
tgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacag |
528 |
Q |
| |
|
|||||||| ||||| || ||||| || |||||||||||||||||||||| |
|
|
| T |
8659696 |
tgagaatcattgaactatgcaggcactgtaacaacagcattcttcacag |
8659744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 51 - 676
Target Start/End: Complemental strand, 23596849 - 23596224
Alignment:
| Q |
51 |
gtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagttgatgagagagttctcttcgctctctcacatgcggttctcaatc |
150 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| |||||||| ||||| ||||| || || ||||| ||||| ||||||||||| || |||||||| | |
|
|
| T |
23596849 |
gtgtaaaagtcaataccctcaaacaaagaatcaatttcaatggtggtttgagcagtagaggaaagagtcctcttagctctctcacaagcagttctcaacc |
23596750 |
T |
|
| Q |
151 |
tcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccacc |
250 |
Q |
| |
|
| ||||| ||||| || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||| || |
|
|
| T |
23596749 |
ttctaagagcccttggatttccactaatatctttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatcttcacctcc |
23596650 |
T |
|
| Q |
251 |
aagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtcccacctcccaaatcaaagatcaac |
350 |
Q |
| |
|
| ||| ||||||||||| || || || || ||||| ||||| || |||||||||||||| || ||||||||||| ||||| || | ||| || || | |
|
|
| T |
23596649 |
caaatgtgtatcaccagctgtagctttcacctcaaagataccttcctcaatagtaagaagtgaaacatcaaaagttccaccaccaagatcgaaaataaga |
23596550 |
T |
|
| Q |
351 |
acgttcttctcaccaacacttgtcgcctttttgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcga |
450 |
Q |
| |
|
||||||||||||||| |||||| || || || |||||||| || |||||||| |||||||| ||||||||||||||||||| ||||| | |||| | |
|
|
| T |
23596549 |
acgttcttctcaccagtacttgtagctttcttatcaagaccataagcaatagcggcagcagtgggctcgttaataattctcatcacattgagtccagaaa |
23596450 |
T |
|
| Q |
451 |
taacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagc |
550 |
Q |
| |
|
| ||||||||||| ||||| ||||||||||| |||||||||||||| ||||| || || ||||| |||||||| | |||| ||| || ||||| || || |
|
|
| T |
23596449 |
tgacaccagcatccttagtagcttgacgttgtgaatcgttgaagtatgcaggcacggttacaacggcattcttaattgttgtaccaaggtaagcctctgc |
23596350 |
T |
|
| Q |
551 |
aatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaacaccaatcattggcttttcacca |
650 |
Q |
| |
|
||||| |||||| || || ||||| || || || || ||||||| ||||||||| ||||| |||| ||||| || | |||||||| || ||| || |
|
|
| T |
23596349 |
gatctccttcatcttcataagaaccatggaagatatctcttcagcagaaaattgcttctcctctgccttgtagttcaccacgatcattggtttgtcagca |
23596250 |
T |
|
| Q |
651 |
ggaccagcaatgaccttaaaaggcca |
676 |
Q |
| |
|
|| |||| ||||||||| || ||||| |
|
|
| T |
23596249 |
gggccaggaatgaccttgaacggcca |
23596224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 69 - 685
Target Start/End: Original strand, 54396345 - 54396961
Alignment:
| Q |
69 |
tcaaacaaagaatcaatctcaatggtagtttgtgcagttgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaagggccctagggt |
168 |
Q |
| |
|
||||||||||||||||| || || || || || |||||||| || || |||||||| ||||||||||| || ||||| |||||||| | || || | | |
|
|
| T |
54396345 |
tcaaacaaagaatcaatttctattgttgtctgagcagttgaagaaagtgttctcttagctctctcacaagctgttcttaatctcctcaaagctcttgcat |
54396444 |
T |
|
| Q |
169 |
ttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagc |
268 |
Q |
| |
|
| ||||||||||||||||| || |||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
54396445 |
taccactaatatccttcttatttttcctcctaaactccgaaacaaaatgattcaccattctgttatcaaaatcttcaccaccaagatgagtatcaccagc |
54396544 |
T |
|
| Q |
269 |
agtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtcccacctcccaaatcaaagatcaacacgttcttctcaccaaca |
368 |
Q |
| |
|
||| || || ||||| || || || |||||||||||||||||||| ||||| ||||| ||||||||||| ||||| || | |||||||| || || |
|
|
| T |
54396545 |
agtagctttcacttcgaagatcccttcttcaatagtaagaagagaaacatcgaaagttccacctcccaagtcaaaaataagcacgttctgttcgcctttt |
54396644 |
T |
|
| Q |
369 |
cttgtcgcctttttgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttag |
468 |
Q |
| |
|
|| | || || || || | ||| || ||||| ||||||||||| ||||| |||||||| ||||| ||||||||||| | ||| ||||||||||||| | |
|
|
| T |
54396645 |
ctcgaagctttcttatccaaaccataagcaattgcagcagcagtaggctcattaataatcctcaacacattcaaacccgaaatagcaccagcatctttcg |
54396744 |
T |
|
| Q |
469 |
ttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttat |
568 |
Q |
| |
|
| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| | ||| ||| |||||||||||| |||| |||||| || |
|
|
| T |
54396745 |
tagcttgacgttgagaatcattgaaataagcaggaacagtaacaacagcattcttcactggatgaccaagaaaagcttcagcaacttctctcatcttgat |
54396844 |
T |
|
| Q |
569 |
tagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaacaccaatcattggcttttcaccaggaccagcaatgacctta |
668 |
Q |
| |
|
| |||||| || ||||||||||| || ||||||| ||| || ||||| || || |||||| | ||||| || |||||| | ||||| | || ||| ||| |
|
|
| T |
54396845 |
caacaccattgaagaaatttcctctgctgcaaatttcttctcttcacctttgtaattaacaacgatcataggtttttcagcgggacctggaacgacttta |
54396944 |
T |
|
| Q |
669 |
aaaggccatagcttcat |
685 |
Q |
| |
|
|| |||||||| ||||| |
|
|
| T |
54396945 |
aacggccatagtttcat |
54396961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 42 - 556
Target Start/End: Complemental strand, 23588006 - 23587492
Alignment:
| Q |
42 |
gtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagttgatgagagagttctcttcgctctctcacatgcgg |
141 |
Q |
| |
|
||||| || |||||||| |||| |||||||||||| |||||||| |||||||| ||||| ||||| || || || || ||||| |||||||| || || | |
|
|
| T |
23588006 |
gtgatggtagtgtaaaagtcaataccctcaaacaatgaatcaatttcaatggtggtttgagcagtagaggaaagggtcctcttagctctctcgcaagcag |
23587907 |
T |
|
| Q |
142 |
ttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatc |
241 |
Q |
| |
|
|||||||||| ||||| ||||| || |||||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
23587906 |
ttctcaatcttctaagagcccttggatttccactaatatccttcttattcttcctcttgaattcttgaacaaaatggttcaccatcctgttatcaaaatc |
23587807 |
T |
|
| Q |
242 |
ttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtcccacctcccaaatca |
341 |
Q |
| |
|
|||||| || | ||| ||||||||||| || || || || ||||| ||||| || ||||||||||| || || ||||||||||| ||||| || | ||| |
|
|
| T |
23587806 |
ttcacctcccaaatgtgtatcaccagctgtagctttgacctcaaagataccttcctcaatagtaagtagggaaacatcaaaagttccaccaccaagatcg |
23587707 |
T |
|
| Q |
342 |
aagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattca |
441 |
Q |
| |
|
|| || | |||||||||||||| ||||| || || || |||||||| || |||||||||||||| || || || |||||||||||||| ||||| | |
|
|
| T |
23587706 |
aaaataagaacgttcttctcacccgtgcttgtagctttcttatcaagaccataagcaatagcagcagcggtaggttcattaataattctcaacacattga |
23587607 |
T |
|
| Q |
442 |
aaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagata |
541 |
Q |
| |
|
|||| || ||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||| ||||| |||||||| | |||| ||| ||||| |
|
|
| T |
23587606 |
gtccagaaatgacaccggcatcttttgtagcttgacgttgtgaatcgttgaagtaagcaggcacagttacaacggcattcttaatcgttgtaccaagata |
23587507 |
T |
|
| Q |
542 |
agcttcagcaatctc |
556 |
Q |
| |
|
||| || |||||||| |
|
|
| T |
23587506 |
agcctctgcaatctc |
23587492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 443 - 532
Target Start/End: Original strand, 35132744 - 35132833
Alignment:
| Q |
443 |
accagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttga |
532 |
Q |
| |
|
|||||| ||| ||||||||||| |||| |||| ||||||||||| | || |||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
35132744 |
accagcaatagcaccagcatctatagtggcttttcgttgagaatcactaaaataagcaggcacagtaacaactgcattcttaacagttga |
35132833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 35132487 - 35132583
Alignment:
| Q |
186 |
ttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaactt |
282 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| | ||| ||||||||||||||||| || || ||||| ||||| || | || |||||||||||||||| |
|
|
| T |
35132487 |
ttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagatgagtgtttccggcagtggccttaactt |
35132583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 629
Target Start/End: Complemental strand, 9335726 - 9335577
Alignment:
| Q |
480 |
tgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatag |
579 |
Q |
| |
|
|||||||| ||||||||||| || || |||||||| |||||||| || | || || | ||| || || |||| ||||| ||||||| | |||| ||||| |
|
|
| T |
9335726 |
tgagaatcattgaagtaagctggcacggtaacaacggcattcttgaccggcgaccccaaatatgcctccgcaacctctctcatctttgtaagcaacatag |
9335627 |
T |
|
| Q |
580 |
acgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaaca |
629 |
Q |
| |
|
| || |||||||||||| ||| ||||| || | |||||| ||||||||| |
|
|
| T |
9335626 |
aagatatttcctcagcacaaaagtgcttctcttgacccttgtagttaaca |
9335577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 30775369 - 30775450
Alignment:
| Q |
264 |
ccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtcccacctcccaaatcaaaga |
345 |
Q |
| |
|
|||||||| || ||||||||||| | | | ||| ||| || |||||||||||||||||||||||||| || | |||||||| |
|
|
| T |
30775369 |
ccagcagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaaga |
30775450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 384 - 508
Target Start/End: Original strand, 30775489 - 30775613
Alignment:
| Q |
384 |
tcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgag |
483 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||||| ||||| ||||||| |||||| | |||||| || |||||||||| |||| |||| || || | |
|
|
| T |
30775489 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatccatagtggcttttcgctgtg |
30775588 |
T |
|
| Q |
484 |
aatcgttgaagtaagcagggacagt |
508 |
Q |
| |
|
||| ||||| |||||||| ||||| |
|
|
| T |
30775589 |
catcattgaaataagcaggcacagt |
30775613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 135; Significance: 5e-70; HSPs: 19)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 27 - 692
Target Start/End: Complemental strand, 17716975 - 17716316
Alignment:
| Q |
27 |
tcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagttgatgagagagttctcttcg |
126 |
Q |
| |
|
|||||||||||||| || || | ||| || ||||||| |||||||| | | ||||||| |||||||| || || ||||| ||||| |||| |||||||| |
|
|
| T |
17716975 |
tcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggcagtagatgatagagctctcttcg |
17716876 |
T |
|
| Q |
127 |
ctctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccat |
226 |
Q |
| |
|
| |||||||| || || ||||| ||| |||| || || ||||| |||||||| |||||||||||||| ||||| |||||| ||||||| ||||| ||||| |
|
|
| T |
17716875 |
ccctctcacaagcagtcctcaacctcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactctcgaacaaagtggttcaccat |
17716776 |
T |
|
| Q |
227 |
tctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtc |
326 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||| || || || || || ||||| | ||| ||| |||||||||||| || | ||| ||||||||||| |
|
|
| T |
17716775 |
tctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagttagcaaagagacatcaaaagta |
17716676 |
T |
|
| Q |
327 |
ccacctcccaaatcaaagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaagaccgtatgcaatagcagcagcagttggctcgttaataa |
426 |
Q |
| |
|
||||| || | ||||||||||| || |||||||| ||||| || |||| |||||| ||| || ||||| || |||||||| ||||| ||||||| |
|
|
| T |
17716675 |
ccaccaccaaggtcaaagatcaagacattcttctctccaacgctggtcg------tgtcaaaaccataagcaatggctgcagcagtgggctcattaataa |
17716582 |
T |
|
| Q |
427 |
ttctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcac |
526 |
Q |
| |
|
|||||| | ||| | |||||| ||| ||||||||| ||||| ||||| | |||||| || ||||||||||||||||||||||| |||||||| | |
|
|
| T |
17716581 |
ttctcatgaaattaagaccagcaatagcaccagcatgcttagtagcttgtctctgagaaaaattaaagtaagcagggacagtaacaacggcattcttaat |
17716482 |
T |
|
| Q |
527 |
agttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcacccttatagtta |
626 |
Q |
| |
|
| || || || || || ||||||| ||| |||||||| | || ||||| || || || || || || ||||||||||| | | ||| | |||||| |
|
|
| T |
17716481 |
ggcagagccaaggtaggcctcagcaacctcacgcatcttcgtgagtaccatggaagagatctcttctgcggcaaattgcttaactttaccactgtagtta |
17716382 |
T |
|
| Q |
627 |
acaccaatcattggcttttcaccaggaccagcaatgaccttaaaaggccatagcttcatctcactc |
692 |
Q |
| |
|
||||||||||||||||||||| | || |||| ||| | |||||||||||| | |||||| |||||| |
|
|
| T |
17716381 |
acaccaatcattggcttttcatccgggccagaaattatcttaaaaggccacaacttcatatcactc |
17716316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 27 - 690
Target Start/End: Complemental strand, 17718239 - 17717579
Alignment:
| Q |
27 |
tcaaatctggcacgggtgattgtggtgtaaaaatcaacaccctcaaacaaagaatcaatctcaatggtagtttgtgcagttgatgagagagttctcttcg |
126 |
Q |
| |
|
|||||||||||||| || || | ||| || ||||||| |||||||| | | ||||||| |||||||| || || | ||| ||||| |||| |||||||| |
|
|
| T |
17718239 |
tcaaatctggcacgagtaatgggggtatagaaatcaattccctcaaatagacaatcaatttcaatggtggtctgggaagtagatgatagagctctcttcg |
17718140 |
T |
|
| Q |
127 |
ctctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccat |
226 |
Q |
| |
|
| |||||||| || || ||||| || |||| || || ||||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| ||||| |
|
|
| T |
17718139 |
ccctctcacaagcagtcctcaacttcataagagctcttgggttgccactaatgtccttcttgttctttctcttgaactcttgaacaaagtggttcaccat |
17718040 |
T |
|
| Q |
227 |
tctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagta---agaagagacacatcaaaa |
323 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||| || || || || || ||||| | ||| ||| ||||||||||||| || | ||| ||||||||| |
|
|
| T |
17718039 |
tctgttattaaaatcctcacctccaagatgggcgtctccggctgtagctttaacctgaaagttacactcttcaatagtagttagcaaagagacatcaaaa |
17717940 |
T |
|
| Q |
324 |
gtcccacctcccaaatcaaagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaagaccgtatgcaatagcagcagcagttggctcgttaa |
423 |
Q |
| |
|
|| ||||| || | ||||||||||| || |||||||| ||||| || |||| |||||| ||| || ||||| || |||||||| ||||| | | |
|
|
| T |
17717939 |
gtaccaccaccaaggtcaaagatcaagacattcttctctccaacgctggtcg------tgtcaaaaccataagcaatggctgcagcagtgggctcatcga |
17717846 |
T |
|
| Q |
424 |
taattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattctt |
523 |
Q |
| |
|
||||| || ||||| | |||||| | || | | ||||| ||||| |||| |||||||| || ||||||||||||||||||||||| |||||| | |
|
|
| T |
17717845 |
taatttccatgacattaagaccagcaaaaagagcggcatccttagtaacttgtatctgagaatcattaaagtaagcagggacagtaacaacggcattcct |
17717746 |
T |
|
| Q |
524 |
cacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcctcacccttatag |
623 |
Q |
| |
|
| || ||||| | || || || |||||||| |||||||| || ||||| || || || || || |||||||||||||| || ||||| || ||| |
|
|
| T |
17717745 |
aatggtagaaccaaagtaggcctctgcaatctcacgcatcttccagagtaccatggaagagatctcttctgcagcaaattgcttatcttcaccattgtag |
17717646 |
T |
|
| Q |
624 |
ttaacaccaatcattggcttttcaccaggaccagcaatgaccttaaaaggccatagcttcatctcac |
690 |
Q |
| |
|
|| ||||||||||||||||||||||| | |||| ||| | |||||||||||| | |||||| |||| |
|
|
| T |
17717645 |
tttacaccaatcattggcttttcacccaggccagaaattatcttaaaaggccacaacttcatatcac |
17717579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 79 - 259
Target Start/End: Complemental strand, 17622181 - 17622001
Alignment:
| Q |
79 |
aatcaatctcaatggtagtttgtgcagttgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaagggccctagggtttccactaat |
178 |
Q |
| |
|
||||||| |||||||| ||||| |||| |||| ||||||||||| || ||||||| || || ||||| ||| |||| || || ||||| ||||| || |
|
|
| T |
17622181 |
aatcaatttcaatggtggtttggacagtaaatgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactgat |
17622082 |
T |
|
| Q |
179 |
atccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggt |
259 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||| |||||| ||||| ||||||||||| |
|
|
| T |
17622081 |
gtccttcttgttctttctcttgaactcttgaacaaagtggttcaccattctgttattaaaatcctcacctccaagatgggt |
17622001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 81 - 692
Target Start/End: Complemental strand, 17666917 - 17666312
Alignment:
| Q |
81 |
tcaatctcaatggtagtttgtgcagttgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaagggccctagggtttccactaatat |
180 |
Q |
| |
|
||||| |||||||| || || ||||| ||||| |||| ||||||||| |||||||| || || | ||| ||| |||| || || ||||| ||||| || | |
|
|
| T |
17666917 |
tcaatttcaatggtggtctgagcagtagatgatagagctctcttcgccctctcacaagcagtccccaacctcataagagctcttgggttgccactgatgt |
17666818 |
T |
|
| Q |
181 |
ccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaac |
280 |
Q |
| |
|
|||| |||||||| || || |||||||||||||| || || ||||||||||||| |||||| ||||| |||||||||| || || | || || ||||| |
|
|
| T |
17666817 |
ccttgttgttctttcttttgaactcttgaacaaagtgattcaccattctgttattaaaatcctcacctccaagatgggggtctccggttgtagctttaac |
17666718 |
T |
|
| Q |
281 |
ttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtcccacctcccaaatcaaagatcaacacgttcttctcaccaacacttgtcgccttt |
380 |
Q |
| |
|
||| ||||||||||||||||| || | | | ||||||||||| ||||| | | ||||||||||| || |||||||| |||| || |||| |
|
|
| T |
17666717 |
cccaatgataccctcttcaatagttagcaaacagacatcaaaagtaccaccgcaaaggtcaaagatcaagacattcttctctccaaagctggtcg----- |
17666623 |
T |
|
| Q |
381 |
ttgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgtt |
480 |
Q |
| |
|
|||||| ||| || ||||| || |||| ||| ||||| || ||||||| || ||||| | ||||| |||| ||| ||||| ||||| ||||| | | |
|
|
| T |
17666622 |
-tgtcaaaaccataagcaatggctgcaggagtgggctcattgataattcccaggacattaagaccagaaataagaccggcatccttagtagcttgtctgt |
17666524 |
T |
|
| Q |
481 |
gagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccataga |
580 |
Q |
| |
|
|| | || || |||||||||| | ||||||| |||||||| | | || || || || || ||||||| ||| |||||||| | || ||||| || |
|
|
| T |
17666523 |
gattaaaattaaaataagcagggatactaacaacggcattcttaatggcagagccaaggtaggcctcagcaacctcacgcatcttcgtgagtaccatgga |
17666424 |
T |
|
| Q |
581 |
cgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaacaccaatcattggcttttcaccaggaccagcaatgaccttaaaaggccatagc |
680 |
Q |
| |
|
|| || || || || | ||||||||| || |||||||| ||||||||||||||||| ||||||||| || |||| ||| | |||||| ||||| | | |
|
|
| T |
17666423 |
agagatctcttctgcggaaaattgcttatcttcacccttgtagttaacaccaatcataggcttttcatacgggccagaaataatcttaaatggccacaac |
17666324 |
T |
|
| Q |
681 |
ttcatctcactc |
692 |
Q |
| |
|
||||| |||||| |
|
|
| T |
17666323 |
ttcatatcactc |
17666312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 79 - 259
Target Start/End: Complemental strand, 17648277 - 17648097
Alignment:
| Q |
79 |
aatcaatctcaatggtagtttgtgcagttgatgagagagttctcttcgctctctcacatgcggttctcaatctcctaagggccctagggtttccactaat |
178 |
Q |
| |
|
||||||| |||||||| ||||| ||| |||| ||||||||||| || ||||||| || || ||||| ||| |||| || || ||||| |||||||| |
|
|
| T |
17648277 |
aatcaatttcaatggtggtttggagagtaaatgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctcttgggttgccactaat |
17648178 |
T |
|
| Q |
179 |
atccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggt |
259 |
Q |
| |
|
|||||||||||||| ||||| ||| |||||||||| || || ||||||||||||| |||||| ||||| ||||||||||| |
|
|
| T |
17648177 |
gtccttcttgttctttctcttgaacacttgaacaaagtgattcaccattctgttattaaaatcctcacctccaagatgggt |
17648097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 17705888 - 17705794
Alignment:
| Q |
165 |
gggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggt |
259 |
Q |
| |
|
||||| |||||||| |||||||| ||||| ||||| ||||||| |||||| ||||| ||||||||||||| |||||| ||||| ||||||||||| |
|
|
| T |
17705888 |
gggttgccactaatgtccttcttcttctttctcttgaactcttaaacaaagtggttcaccattctgttattaaaatcctcacctccaagatgggt |
17705794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 17704261 - 17704112
Alignment:
| Q |
109 |
atgagagagttctcttcgctctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttg |
208 |
Q |
| |
|
|||| ||||||||||| || ||||||| || || ||||| ||| |||| || || ||| ||||| || |||||| ||||||| ||||| |||||||| |
|
|
| T |
17704261 |
atgatagagttctcttggccttctcacaagcagtcctcaacctcataagagctctttggtcgccactgatgtccttcctgttctttctcttgaactcttg |
17704162 |
T |
|
| Q |
209 |
aacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatggg |
258 |
Q |
| |
|
|||||| | ||| ||||||||||||| |||||| ||||| |||||||||| |
|
|
| T |
17704161 |
aacaaagtagttcaccattctgttattaaaatcctcacctccaagatggg |
17704112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 381 - 528
Target Start/End: Complemental strand, 16657451 - 16657304
Alignment:
| Q |
381 |
ttgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgtt |
480 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| || || || ||||||| | ||||| | |||||||| ||||||||||| | || |||| || | |
|
|
| T |
16657451 |
ttgtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccagcgatggcaccagcatctatggtggcttttcgct |
16657352 |
T |
|
| Q |
481 |
gagaatcgttgaagtaagcagggacagtaacaacagcattcttcacag |
528 |
Q |
| |
|
| ||||| ||||||||||| || |||||||||||||||||||| |||| |
|
|
| T |
16657351 |
gcgaatcattgaagtaagctggcacagtaacaacagcattcttgacag |
16657304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 692
Target Start/End: Complemental strand, 17647858 - 17647658
Alignment:
| Q |
492 |
aagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcct |
591 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| | | || || || || || ||||||| |||||| ||||| || || ||||| | || || || | |
|
|
| T |
17647858 |
aagtaagcagggaaagtaacaacagcatccttaatggcagagccaaggtaggcctcagcaacctctcgaatcttcatgagtaccatggcagagatctctt |
17647759 |
T |
|
| Q |
592 |
cagcagcaaattgcttgtcctcacccttatagttaacaccaatcattggcttttca-ccaggaccagcaatgaccttaaaaggccatagcttcatctcac |
690 |
Q |
| |
|
| || ||||||||||| || ||||| || ||||||||| ||||||||||||||||| ||||| |||| ||| | |||||||||||| | |||||| |||| |
|
|
| T |
17647758 |
ctgcggcaaattgcttatcttcaccattgtagttaacaacaatcattggcttttcatccagg-ccagaaattatcttaaaaggccacaacttcatatcac |
17647660 |
T |
|
| Q |
691 |
tc |
692 |
Q |
| |
|
|| |
|
|
| T |
17647659 |
tc |
17647658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 444 - 523
Target Start/End: Original strand, 12234986 - 12235065
Alignment:
| Q |
444 |
ccagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattctt |
523 |
Q |
| |
|
||||| || |||||||||||| ||||||||| ||||||||||| ||||| |||||||| || |||||||| |||||||| |
|
|
| T |
12234986 |
ccagcaatgacaccagcatctatagttgcttttcgttgagaatcattgaaataagcaggcacggtaacaactgcattctt |
12235065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 692
Target Start/End: Complemental strand, 17703770 - 17703672
Alignment:
| Q |
594 |
gcagcaaattgcttgtcctcacccttatagttaacaccaatcattggcttttcaccaggaccagcaatgaccttaaaaggccatagcttcatctcactc |
692 |
Q |
| |
|
|||| ||||||||| || ||||| || ||||||||||||||||||||||| ||| | || |||| ||| | |||||||||||| | |||||| |||||| |
|
|
| T |
17703770 |
gcagtaaattgcttatcttcaccattgtagttaacaccaatcattggcttatcatccgggccagaaataatcttaaaaggccacaacttcatatcactc |
17703672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 282
Target Start/End: Original strand, 7542208 - 7542361
Alignment:
| Q |
129 |
ctctcacatgcggttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattc |
228 |
Q |
| |
|
|||||||| || |||||||| ||||| | ||| | || || |||||||| ||| |||||||| ||||| |||||||| ||||| | ||| |||||| |
|
|
| T |
7542208 |
ctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctttctcttgaactcttgtacaaagtagttcgccattc |
7542307 |
T |
|
| Q |
229 |
tgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaactt |
282 |
Q |
| |
|
| |||||||| ||||| |||||||| || || | ||||||||||||||||||| |
|
|
| T |
7542308 |
tattatcaaagtcttctccaccaaggtgagtgttgccagcagtggccttaactt |
7542361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 580
Target Start/End: Complemental strand, 12245265 - 12245141
Alignment:
| Q |
456 |
ccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatct |
555 |
Q |
| |
|
||||||||| | ||||||| || |||||||| | || |||||||| |||||||||||||||||||| || | ||| | | ||| || |||||||| | |
|
|
| T |
12245265 |
ccagcatctatcgttgcttttcgctgagaatcactaaaataagcaggtacagtaacaacagcattctttaccggtgattctaaatatgcctcagcaattt |
12245166 |
T |
|
| Q |
556 |
ctcgcatctttattagcaccataga |
580 |
Q |
| |
|
||||||||||| |||| |||||||| |
|
|
| T |
12245165 |
ctcgcatctttgttagtaccataga |
12245141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 580
Target Start/End: Original strand, 7542533 - 7542659
Alignment:
| Q |
454 |
caccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaat |
553 |
Q |
| |
|
|||| |||||| |||| |||| ||||||||||| || || |||||||| ||||||||||| |||||| ||||||||| | | ||| | |||||||| |
|
|
| T |
7542533 |
cacccgcatctatagtggcttttcgttgagaatcattaaaataagcaggtacagtaacaactgcattcgtcacagttgtttctaaatacgactcagcaat |
7542632 |
T |
|
| Q |
554 |
ctctcgcatctttattagcaccataga |
580 |
Q |
| |
|
|||||||||||| | || |||||||| |
|
|
| T |
7542633 |
ttctcgcatctttgtgagtaccataga |
7542659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 521
Target Start/End: Complemental strand, 17703919 - 17703843
Alignment:
| Q |
445 |
cagcgataacaccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattc |
521 |
Q |
| |
|
|||| |||||| ||||||| ||||| ||||| | ||||||| || |||||| ||||||||||||||||||||||| |
|
|
| T |
17703919 |
cagcaataacagcagcatccttagtagcttgtctctgagaattattaaagtaaacagggacagtaacaacagcattc |
17703843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 345
Target Start/End: Complemental strand, 16662121 - 16661962
Alignment:
| Q |
186 |
ttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttcaa |
285 |
Q |
| |
|
||||||||||| ||||| |||| ||||| | ||| | ||||||||||||||| || || || || || || || | |||| |||||| |||||||||| |
|
|
| T |
16662121 |
ttgttcttcctattaaattctttcacaaagtagttcaacattctgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaa |
16662022 |
T |
|
| Q |
286 |
aaataccctcttcaatagtaagaagagacacatcaaaagtcccacctcccaaatcaaaga |
345 |
Q |
| |
|
| | | | ||| ||| || || ||||||||||||||||||||||| || | |||||||| |
|
|
| T |
16662021 |
agacatcacctttaattgtgaggagagacacatcaaaagtcccaccaccaagatcaaaga |
16661962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 647
Target Start/End: Complemental strand, 17719821 - 17719774
Alignment:
| Q |
600 |
aattgcttgtcctcacccttatagttaacaccaatcattggcttttca |
647 |
Q |
| |
|
|||||||| || | |||||| ||||||||||||||||||||||||||| |
|
|
| T |
17719821 |
aattgcttatcattacccttgtagttaacaccaatcattggcttttca |
17719774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 12245549 - 12245439
Alignment:
| Q |
172 |
cactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagt |
271 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| || |||| | ||| |||||||| ||||||||||| || || ||||| || || | |||||||| |
|
|
| T |
12245549 |
cactaatatccaatttgttctttctcttgaactcctgtgcaaagtagtttaccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagt |
12245450 |
T |
|
| Q |
272 |
ggccttaactt |
282 |
Q |
| |
|
||||||||||| |
|
|
| T |
12245449 |
ggccttaactt |
12245439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 521
Target Start/End: Complemental strand, 17621786 - 17621745
Alignment:
| Q |
480 |
tgagaatcgttgaagtaagcagggacagtaacaacagcattc |
521 |
Q |
| |
|
|||||||| || |||||| ||||||||||||||||||||||| |
|
|
| T |
17621786 |
tgagaatcattaaagtaaacagggacagtaacaacagcattc |
17621745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 601
Target Start/End: Original strand, 11133228 - 11133448
Alignment:
| Q |
381 |
ttgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgtt |
480 |
Q |
| |
|
||||||||||| |||||||| ||||| || || |||||||| || |||| || ||| || | ||| || |||||||| |||||| |||| ||||| |||| |
|
|
| T |
11133228 |
ttgtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacctgcaataacacctgcatctctagtagcttggcgtt |
11133327 |
T |
|
| Q |
481 |
gagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccataga |
580 |
Q |
| |
|
| || || || ||||||||||| ||||| | ||| ||| |||||| ||||| || || ||| |||| |||||||| || || ||| | | ||||| || |
|
|
| T |
11133328 |
gcgagtcattaaagtaagcaggaacagttataacgacatccttcactgttgatccaaggtaaacttctgcaatctcacgaatttttgtcaataccattga |
11133427 |
T |
|
| Q |
581 |
cgaaatttcctcagcagcaaa |
601 |
Q |
| |
|
|| ||||||||||||||||| |
|
|
| T |
11133428 |
tgatatttcctcagcagcaaa |
11133448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 382 - 637
Target Start/End: Original strand, 11196958 - 11197213
Alignment:
| Q |
382 |
tgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttg |
481 |
Q |
| |
|
|||||||||| |||||||| ||||| |||| ||||| || || |||| || |||||| | ||||| |||||||| |||||| ||| | || ||||| |
|
|
| T |
11196958 |
tgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatctcgagtggactggcgttg |
11197057 |
T |
|
| Q |
482 |
agaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagac |
581 |
Q |
| |
|
|| || || ||||||||||| ||||| | |||| ||| |||||| ||||| || || ||||||||||| ||||| ||| ||| | ||||| || |
|
|
| T |
11197058 |
tgagtcattaaagtaagcaggcacagttataacaacatccttcactgttgatccaaggtaagcttcagctatctcggccatttttgccaataccatcgat |
11197157 |
T |
|
| Q |
582 |
gaaatttcctcagcagcaaattgcttgtcctcacccttatagttaacaccaatcat |
637 |
Q |
| |
|
|| ||||| ||||||||||| ||||| ||||| | |||||||||||| ||||||| |
|
|
| T |
11197158 |
gagatttcttcagcagcaaaatgcttttcctcgtcattatagttaacaacaatcat |
11197213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 382 - 637
Target Start/End: Original strand, 11156505 - 11156760
Alignment:
| Q |
382 |
tgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttgacgttg |
481 |
Q |
| |
|
|||||||||| |||||||| ||||| |||| ||||| || || |||| || |||||| | ||||| |||||||| ||||||| || | || ||||| |
|
|
| T |
11156505 |
tgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatcttgggtggactggcgttg |
11156604 |
T |
|
| Q |
482 |
agaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagac |
581 |
Q |
| |
|
|| || || ||||||||||| ||||| | |||| ||| |||||| ||||| || || ||| ||||||| ||||| ||| ||| | ||||| || |
|
|
| T |
11156605 |
tgagtcattaaagtaagcaggcacagttataacaacatccttcactgttgatccaaggtaaacttcagctatctcggccatttttgccaataccatcgat |
11156704 |
T |
|
| Q |
582 |
gaaatttcctcagcagcaaattgcttgtcctcacccttatagttaacaccaatcat |
637 |
Q |
| |
|
|| ||||| ||||||||||| ||||| ||||| | |||||||||||| ||||||| |
|
|
| T |
11156705 |
gagatttcttcagcagcaaaatgcttttcctcgtctttatagttaacaacaatcat |
11156760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 637
Target Start/End: Original strand, 11200123 - 11200382
Alignment:
| Q |
382 |
tgtcaagaccgtatgcaatagcagcagcagttggctcgttaataattctcaaaacattcaaaccagcgataacaccagcatctttagttgcttg----ac |
477 |
Q |
| |
|
|||||||||| |||||||| ||||| |||| ||||| || || |||| ||||||||| | ||||| ||| |||| |||||| ||| | || || |
|
|
| T |
11200123 |
tgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattgaggccagcaatagcacccgcatctcaagtagactggcgtac |
11200222 |
T |
|
| Q |
478 |
gttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccat |
577 |
Q |
| |
|
|||| ||||| || ||||| | ||| ||| | | |||| ||| |||||| ||||| || || ||||||||||||||||| | ||| ||| | | ||||| |
|
|
| T |
11200223 |
gttgtgaatcattaaagtatgtaggcacaattataacaacatccttcactgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccat |
11200322 |
T |
|
| Q |
578 |
agacgaaatttcctcagcagcaaattgcttgtcctcacccttatagttaacaccaatcat |
637 |
Q |
| |
|
|| || ||||| || |||||||| ||||| ||||| | |||||||||||| ||||||| |
|
|
| T |
11200323 |
ggatgagatttcttctgcagcaaaatgcttttcctcgtcattatagttaacaacaatcat |
11200382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 637
Target Start/End: Original strand, 11161514 - 11161639
Alignment:
| Q |
512 |
aacagcattcttcacagttgaaccgagataagcttcagcaatctctcgcatctttattagcaccatagacgaaatttcctcagcagcaaattgcttgtcc |
611 |
Q |
| |
|
|||| ||| |||||| ||||| || || ||||||||||||||||| | ||| ||| | | ||||| || || ||||| || |||||||| ||||| ||| |
|
|
| T |
11161514 |
aacaacatccttcactgttgatccaaggtaagcttcagcaatctcgcccatttttgtcaataccatggatgagatttcttctgcagcaaaatgcttttcc |
11161613 |
T |
|
| Q |
612 |
tcacccttatagttaacaccaatcat |
637 |
Q |
| |
|
|| | |||||||||||| ||||||| |
|
|
| T |
11161614 |
tcgtcattatagttaacaacaatcat |
11161639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 331
Target Start/End: Complemental strand, 34466967 - 34466777
Alignment:
| Q |
141 |
gttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaat |
240 |
Q |
| |
|
|||||||| ||||| | || ||||||||||||||||||||||| || | ||||||||| ||||| | |||| ||||| ||||||| |||||||| | |
|
|
| T |
34466967 |
gttctcaacctcctcaaagctctagggtttccactaatatccttattatgcttcctcttgaactcctttgcaaagtggttcgccattctattatcaaagt |
34466868 |
T |
|
| Q |
241 |
cttcaccaccaagatgggtatcaccagcagtggccttaacttcaaaaataccctcttcaatagtaagaagagacacatcaaaagtcccacc |
331 |
Q |
| |
|
| || | || || || || | ||||| |||||||||||||||||| | | || | ||| ||||| ||||||||||||||||||||||| |
|
|
| T |
34466867 |
cctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaaggagagacacatcaaaagtcccacc |
34466777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 454 - 528
Target Start/End: Complemental strand, 4678419 - 4678345
Alignment:
| Q |
454 |
caccagcatctttagttgcttgacgttgagaatcgttgaagtaagcagggacagtaacaacagcattcttcacag |
528 |
Q |
| |
|
||||||||||| | || |||| ||||||||||| |||||||| ||||| ||||||||||| |||||||||||| |
|
|
| T |
4678419 |
caccagcatctatggtagcttttcgttgagaatcattgaagtatgcaggcacagtaacaacgacattcttcacag |
4678345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 15595028 - 15595125
Alignment:
| Q |
141 |
gttctcaatctcctaagggccctagggtttccactaatatccttcttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaa |
238 |
Q |
| |
|
|||||||||||||| | |||||| ||||| ||| |||||||| ||||||||| |||| || || || |||| | ||| ||||||||||||||||| |
|
|
| T |
15595028 |
gttctcaatctcctcaaggcccttgggttcccagtaatatccactttgttcttcgtcttgaattcctgcgcaaagtagttgaccattctgttatcaaa |
15595125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 28776805 - 28776866
Alignment:
| Q |
328 |
cacctcccaaatcaaagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaaga |
389 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||| ||| | ||||||| |||| |
|
|
| T |
28776805 |
cacctcccaaatcaaagatcaacaaattcttctcaccaatactcgtcacttttttgtgaaga |
28776866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 12528543 - 12528640
Alignment:
| Q |
186 |
ttgttcttcctcttaaactcttgaacaaaatggttaaccattctgttatcaaaatcttcaccaccaagatgggtatcaccagcagtggccttaacttc |
283 |
Q |
| |
|
|||||||||||||||||||||| ||||| || || ||||||| |||||||| || || || ||||| || || || || ||||||||||| ||||| |
|
|
| T |
12528543 |
ttgttcttcctcttaaactctttcacaaagtgattcaccattcgattatcaaagtcctctcctccaaggtgagtgtctccggcagtggccttgacttc |
12528640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 19229830 - 19229769
Alignment:
| Q |
328 |
cacctcccaaatcaaagatcaacacgttcttctcaccaacacttgtcgcctttttgtcaaga |
389 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||| ||| ||| | ||||||| |||| |
|
|
| T |
19229830 |
cacctcccatatcaaagatcaacaaattcttctcaccaatactcgtcacttttttgtgaaga |
19229769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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