View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16068_high_62 (Length: 282)
Name: NF16068_high_62
Description: NF16068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16068_high_62 |
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Alignment Details
Target: chr1 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 46932797 - 46933071
Alignment:
| Q |
1 |
gaggagccaataccattatccatttaacagaagtatgcgtattattaagacttggtcttttgactttagaactagagagcctatattattatttattatt |
100 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
46932797 |
gaggagccaataccattatccatttaatagaagtatgcgtattattaagacttggtcttttgactttagaactagagagcctatattatttattattatt |
46932896 |
T |
|
| Q |
101 |
gaacaaatcatggagtttgacaatatcatattaatttttagtgtttaacaaatcatgtataaatagagcttcttagtaacattaacatgcatcaaaccag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46932897 |
gaacaaatcatggagtttgacaatatcatattaatttttagtgtttaacaaatcatgtataaatagagcttcttagtaacattaacatgcatcaaaccag |
46932996 |
T |
|
| Q |
201 |
catttcctctcttgtactcaatttctctcattatttatcaactattcacacacacattacattcattcatctcac |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46932997 |
catttcctctcttgtactcaatttctctcattatttatcaactattcacacacacattacattcattcatctcac |
46933071 |
T |
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