View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16068_low_30 (Length: 439)
Name: NF16068_low_30
Description: NF16068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16068_low_30 |
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Alignment Details
Target: chr2 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 7 - 421
Target Start/End: Original strand, 37560783 - 37561197
Alignment:
| Q |
7 |
tccaagaatattcaacttcttcaacaacaaaattcatctattaatttattgttatatccaaacaataatacctgcattactgaaccaaaaccttacatca |
106 |
Q |
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| T |
37560783 |
tccaacaatattcaacttcttcaacaacaaaattcatctattaatttattgttatatccaaacaataatacctgcattactgaaccaaaaccttacataa |
37560882 |
T |
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| Q |
107 |
cacattcaacaaattcaaccacattcgtttcattggtttttcgcctttaattgcactttttcatcacacaataatttattggcagttacaacattttcca |
206 |
Q |
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| T |
37560883 |
cacattcaacaaattcaaccacattcgtttcattggtttttcgcctttaattgcactttttcatcacacaataatttataggcagttacaacattttcca |
37560982 |
T |
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| Q |
207 |
caagttcaacgaatatttgttacaataactttaaacctaaaggtgcatgcatttgttattgatagagttattaaaaggaaaattaaagttcaatgtgatg |
306 |
Q |
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| T |
37560983 |
caagttcaacgaattattgttacactaactttaaacctaaaggtgcatgcatttgttattgatagagttattaaaaggaaaattaaagttcaatgtgatg |
37561082 |
T |
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| Q |
307 |
aaaattagattatgcaattttattgatgaatttcaaaggaagaagggaaatgaaaaaaccttgttatatcgttgtttatgttattcttctttgtgcttta |
406 |
Q |
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| T |
37561083 |
aaaattagattatgcaattttattgatgaatttcaaaggaagaagggaaatgaaaaaaccttgttatatcgttgtttatgttattcttctttgtgcttta |
37561182 |
T |
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| Q |
407 |
gaaaaaggatgctca |
421 |
Q |
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| T |
37561183 |
gaaaaaggatgctca |
37561197 |
T |
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