View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16068_low_39 (Length: 382)

Name: NF16068_low_39
Description: NF16068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16068_low_39
NF16068_low_39
[»] chr2 (41 HSPs)
chr2 (194-380)||(27332025-27332200)
chr2 (20-147)||(27332246-27332370)
chr2 (326-382)||(37742833-37742889)
chr2 (337-380)||(15269694-15269737)
chr2 (333-380)||(42695767-42695814)
chr2 (326-380)||(1420699-1420753)
chr2 (326-380)||(3376466-3376520)
chr2 (326-380)||(10197853-10197906)
chr2 (326-380)||(23498230-23498284)
chr2 (326-380)||(28181521-28181575)
chr2 (326-380)||(39235016-39235070)
chr2 (320-380)||(18449957-18450017)
chr2 (325-380)||(13849297-13849352)
chr2 (325-380)||(20925730-20925785)
chr2 (326-380)||(4826485-4826539)
chr2 (326-380)||(6579895-6579949)
chr2 (326-380)||(7491487-7491541)
chr2 (326-380)||(8247171-8247225)
chr2 (326-380)||(10877498-10877552)
chr2 (326-380)||(12467823-12467877)
chr2 (326-380)||(13375505-13375559)
chr2 (326-380)||(14527943-14527997)
chr2 (336-378)||(15913226-15913268)
chr2 (326-380)||(19576240-19576294)
chr2 (326-380)||(25899193-25899247)
chr2 (326-380)||(28786757-28786811)
chr2 (326-380)||(31909609-31909663)
chr2 (326-380)||(32674426-32674480)
chr2 (326-380)||(36602061-36602115)
chr2 (346-380)||(39293543-39293577)
chr2 (326-380)||(39407970-39408024)
chr2 (326-380)||(40172076-40172130)
chr2 (326-380)||(40649245-40649299)
chr2 (326-380)||(40833662-40833716)
chr2 (326-380)||(41096119-41096173)
chr2 (326-380)||(42056230-42056284)
chr2 (326-380)||(44987909-44987963)
chr2 (336-380)||(810997-811040)
chr2 (320-380)||(15848819-15848879)
chr2 (320-372)||(18649557-18649609)
chr2 (348-380)||(32864164-32864196)
[»] chr8 (48 HSPs)
chr8 (326-380)||(6010147-6010201)
chr8 (326-380)||(12000686-12000740)
chr8 (326-380)||(30087761-30087815)
chr8 (326-380)||(31873453-31873507)
chr8 (326-380)||(36652628-36652682)
chr8 (326-380)||(37505149-37505203)
chr8 (326-380)||(37954511-37954565)
chr8 (326-380)||(39645744-39645798)
chr8 (336-380)||(5733191-5733235)
chr8 (327-362)||(10278231-10278266)
chr8 (325-380)||(24450711-24450766)
chr8 (326-380)||(600084-600138)
chr8 (326-380)||(2099002-2099056)
chr8 (326-380)||(7427203-7427257)
chr8 (326-380)||(11587792-11587846)
chr8 (326-380)||(11714632-11714686)
chr8 (326-380)||(12113379-12113433)
chr8 (326-380)||(14433182-14433236)
chr8 (326-380)||(14809911-14809965)
chr8 (326-380)||(16999385-16999439)
chr8 (326-380)||(21582757-21582811)
chr8 (326-380)||(22453348-22453402)
chr8 (326-380)||(24333202-24333256)
chr8 (326-380)||(24422345-24422399)
chr8 (326-380)||(27919459-27919513)
chr8 (326-380)||(29949292-29949346)
chr8 (326-380)||(30526351-30526405)
chr8 (326-380)||(30597081-30597135)
chr8 (326-380)||(31230512-31230566)
chr8 (326-380)||(32395070-32395124)
chr8 (326-380)||(32629626-32629680)
chr8 (326-380)||(34865818-34865872)
chr8 (326-380)||(34908875-34908929)
chr8 (326-380)||(35544026-35544080)
chr8 (326-380)||(35631221-35631275)
chr8 (326-380)||(39168823-39168877)
chr8 (326-380)||(39284390-39284444)
chr8 (326-380)||(41541013-41541067)
chr8 (326-380)||(42192258-42192312)
chr8 (326-380)||(42946454-42946508)
chr8 (326-380)||(42981387-42981441)
chr8 (326-379)||(29938485-29938538)
chr8 (326-382)||(167767-167823)
chr8 (336-380)||(16422054-16422098)
chr8 (326-378)||(18185574-18185626)
chr8 (346-382)||(18546274-18546310)
chr8 (326-382)||(26747020-26747076)
chr8 (336-380)||(28481884-28481928)
[»] chr6 (32 HSPs)
chr6 (326-380)||(30510788-30510842)
chr6 (326-382)||(31004096-31004152)
chr6 (326-380)||(4981170-4981224)
chr6 (326-380)||(7596052-7596106)
chr6 (326-380)||(17360793-17360847)
chr6 (326-379)||(19098713-19098766)
chr6 (328-380)||(5042909-5042961)
chr6 (326-382)||(17941799-17941855)
chr6 (326-382)||(32588868-32588924)
chr6 (326-377)||(24557077-24557128)
chr6 (326-380)||(200234-200288)
chr6 (326-380)||(1114383-1114437)
chr6 (326-380)||(1779016-1779070)
chr6 (326-380)||(3787286-3787340)
chr6 (326-380)||(6612569-6612623)
chr6 (326-380)||(9660259-9660313)
chr6 (326-380)||(11173079-11173133)
chr6 (326-380)||(12499504-12499558)
chr6 (326-380)||(12509343-12509397)
chr6 (326-380)||(13631096-13631150)
chr6 (324-378)||(13909856-13909909)
chr6 (326-380)||(14499302-14499356)
chr6 (326-380)||(21858720-21858774)
chr6 (326-380)||(26409241-26409295)
chr6 (326-380)||(30739185-30739239)
chr6 (335-381)||(31712557-31712603)
chr6 (326-380)||(35039868-35039922)
chr6 (326-363)||(3401445-3401482)
chr6 (333-382)||(10364493-10364542)
chr6 (326-382)||(17441998-17442054)
chr6 (336-380)||(30240400-30240444)
chr6 (326-378)||(34218944-34218996)
[»] chr1 (42 HSPs)
chr1 (326-380)||(4227940-4227994)
chr1 (326-380)||(16436250-16436304)
chr1 (326-380)||(16629887-16629941)
chr1 (326-380)||(32162245-32162299)
chr1 (326-380)||(38817042-38817096)
chr1 (326-380)||(49367272-49367326)
chr1 (325-380)||(5432168-5432223)
chr1 (326-361)||(6260566-6260601)
chr1 (326-380)||(3280894-3280948)
chr1 (326-380)||(5653521-5653575)
chr1 (326-380)||(10085905-10085959)
chr1 (334-380)||(13985310-13985356)
chr1 (326-380)||(14149236-14149290)
chr1 (326-380)||(15574897-15574951)
chr1 (326-380)||(16011395-16011449)
chr1 (326-380)||(18127529-18127583)
chr1 (326-380)||(25984569-25984623)
chr1 (326-380)||(26333317-26333371)
chr1 (326-380)||(26541055-26541109)
chr1 (326-380)||(30679467-30679521)
chr1 (346-376)||(32472898-32472928)
chr1 (326-380)||(34347465-34347519)
chr1 (326-380)||(34967364-34967418)
chr1 (326-380)||(38239058-38239112)
chr1 (326-380)||(39282726-39282780)
chr1 (326-380)||(40403730-40403784)
chr1 (326-380)||(42334291-42334345)
chr1 (326-380)||(42379385-42379439)
chr1 (326-380)||(44343677-44343731)
chr1 (326-380)||(47393415-47393469)
chr1 (326-380)||(51560940-51560994)
chr1 (327-380)||(24583978-24584031)
chr1 (327-380)||(24589692-24589745)
chr1 (325-378)||(35096808-35096861)
chr1 (336-380)||(7572348-7572392)
chr1 (340-380)||(16689218-16689258)
chr1 (346-382)||(24681106-24681142)
chr1 (326-378)||(27999816-27999868)
chr1 (320-380)||(28979616-28979676)
chr1 (326-382)||(31045376-31045432)
chr1 (336-380)||(35150058-35150102)
chr1 (336-380)||(52177977-52178021)
[»] chr4 (37 HSPs)
chr4 (327-380)||(6328352-6328405)
chr4 (326-380)||(20540286-20540340)
chr4 (326-380)||(55968735-55968789)
chr4 (326-380)||(55984147-55984201)
chr4 (326-382)||(22019282-22019338)
chr4 (326-380)||(388237-388291)
chr4 (326-380)||(596183-596237)
chr4 (326-380)||(3506204-3506258)
chr4 (326-380)||(4293962-4294016)
chr4 (326-380)||(6284175-6284229)
chr4 (326-380)||(11116401-11116455)
chr4 (326-380)||(11248781-11248835)
chr4 (326-380)||(16833637-16833691)
chr4 (326-380)||(20180561-20180615)
chr4 (326-380)||(23137879-23137933)
chr4 (326-380)||(23621816-23621870)
chr4 (326-380)||(26740250-26740304)
chr4 (326-380)||(26882917-26882971)
chr4 (326-380)||(29290144-29290198)
chr4 (326-380)||(29494796-29494850)
chr4 (326-380)||(35876876-35876930)
chr4 (326-380)||(39717517-39717570)
chr4 (326-380)||(41987996-41988050)
chr4 (326-380)||(45250264-45250318)
chr4 (326-380)||(48380767-48380821)
chr4 (327-380)||(13252201-13252254)
chr4 (337-382)||(16959037-16959082)
chr4 (326-379)||(37912638-37912691)
chr4 (326-379)||(42629615-42629668)
chr4 (326-382)||(5388350-5388406)
chr4 (326-382)||(10672847-10672903)
chr4 (326-382)||(10886487-10886543)
chr4 (320-380)||(20978183-20978243)
chr4 (348-380)||(29462565-29462597)
chr4 (326-382)||(32385393-32385449)
chr4 (326-382)||(34246947-34247003)
chr4 (346-382)||(35340790-35340826)
[»] chr5 (28 HSPs)
chr5 (308-380)||(39612928-39613000)
chr5 (332-380)||(86630-86678)
chr5 (337-380)||(40275225-40275268)
chr5 (326-380)||(33688-33742)
chr5 (326-380)||(1122576-1122630)
chr5 (326-380)||(2606454-2606508)
chr5 (326-380)||(4047636-4047690)
chr5 (326-380)||(4456587-4456641)
chr5 (326-380)||(7414809-7414863)
chr5 (325-375)||(9201328-9201378)
chr5 (326-380)||(9461552-9461606)
chr5 (326-380)||(27187246-27187300)
chr5 (326-380)||(29000749-29000803)
chr5 (326-380)||(34606829-34606883)
chr5 (326-380)||(35189369-35189423)
chr5 (326-380)||(35870124-35870178)
chr5 (326-380)||(36302292-36302346)
chr5 (326-380)||(36347240-36347294)
chr5 (326-380)||(39895833-39895887)
chr5 (326-380)||(42940960-42941014)
chr5 (333-382)||(10164868-10164917)
chr5 (334-382)||(6923199-6923247)
chr5 (320-380)||(7196806-7196866)
chr5 (332-380)||(10370742-10370790)
chr5 (324-380)||(10601861-10601917)
chr5 (336-380)||(15268317-15268361)
chr5 (336-380)||(16626439-16626483)
chr5 (326-382)||(31196087-31196143)
[»] scaffold0011 (1 HSPs)
scaffold0011 (326-380)||(63538-63592)
[»] chr7 (40 HSPs)
chr7 (326-380)||(28234174-28234228)
chr7 (326-380)||(34275488-34275542)
chr7 (326-380)||(42688559-42688613)
chr7 (326-380)||(44894607-44894661)
chr7 (325-382)||(12118652-12118709)
chr7 (326-378)||(8612009-8612061)
chr7 (326-382)||(22624506-22624562)
chr7 (326-378)||(27330415-27330467)
chr7 (325-380)||(4089735-4089790)
chr7 (326-380)||(2649094-2649148)
chr7 (326-380)||(3225629-3225683)
chr7 (326-380)||(4513393-4513447)
chr7 (326-380)||(9417636-9417690)
chr7 (326-376)||(11910467-11910517)
chr7 (326-380)||(13446161-13446215)
chr7 (326-380)||(18235079-18235133)
chr7 (326-380)||(21106018-21106071)
chr7 (336-378)||(21443228-21443270)
chr7 (326-380)||(22706797-22706851)
chr7 (326-380)||(24923409-24923463)
chr7 (326-380)||(28536665-28536719)
chr7 (326-380)||(29155527-29155581)
chr7 (326-380)||(29985803-29985857)
chr7 (326-380)||(32778000-32778054)
chr7 (326-380)||(35542154-35542208)
chr7 (326-380)||(37115926-37115980)
chr7 (326-380)||(39199240-39199294)
chr7 (326-380)||(44187076-44187130)
chr7 (326-380)||(44481180-44481234)
chr7 (326-380)||(45780695-45780749)
chr7 (326-380)||(46944522-46944576)
chr7 (326-382)||(1643539-1643595)
chr7 (320-376)||(3783802-3783858)
chr7 (336-380)||(19866320-19866364)
chr7 (326-378)||(21553557-21553609)
chr7 (326-382)||(22368971-22369027)
chr7 (326-382)||(31542515-31542571)
chr7 (326-378)||(43468307-43468359)
chr7 (326-382)||(46373036-46373092)
chr7 (336-380)||(48841074-48841118)
[»] chr3 (39 HSPs)
chr3 (326-376)||(39144440-39144490)
chr3 (326-380)||(52040283-52040337)
chr3 (326-380)||(54747743-54747797)
chr3 (326-382)||(8108627-8108683)
chr3 (336-380)||(14343805-14343849)
chr3 (326-378)||(38999640-38999692)
chr3 (326-382)||(42939609-42939665)
chr3 (326-382)||(47241354-47241410)
chr3 (326-377)||(8096647-8096698)
chr3 (326-380)||(1540844-1540898)
chr3 (326-380)||(4047112-4047166)
chr3 (326-380)||(19960859-19960913)
chr3 (326-380)||(20394025-20394079)
chr3 (326-380)||(21216700-21216754)
chr3 (326-380)||(23609267-23609321)
chr3 (326-380)||(25903942-25903996)
chr3 (326-380)||(27848719-27848773)
chr3 (326-380)||(28227165-28227219)
chr3 (326-380)||(29227204-29227258)
chr3 (326-380)||(29343396-29343450)
chr3 (326-380)||(30358910-30358964)
chr3 (326-380)||(32100115-32100169)
chr3 (326-380)||(38096223-38096277)
chr3 (326-380)||(40164076-40164130)
chr3 (326-380)||(41751295-41751349)
chr3 (326-380)||(42490490-42490544)
chr3 (326-380)||(43175928-43175982)
chr3 (326-380)||(47054190-47054244)
chr3 (326-380)||(47895618-47895672)
chr3 (326-380)||(48333902-48333956)
chr3 (326-380)||(48897073-48897127)
chr3 (326-380)||(49384287-49384341)
chr3 (326-380)||(52060305-52060359)
chr3 (326-380)||(53655000-53655054)
chr3 (326-378)||(3428879-3428931)
chr3 (326-382)||(23782379-23782435)
chr3 (326-382)||(34663622-34663678)
chr3 (326-378)||(44804762-44804814)
chr3 (326-378)||(45674153-45674205)
[»] scaffold0015 (1 HSPs)
scaffold0015 (325-378)||(20652-20705)
[»] scaffold0060 (2 HSPs)
scaffold0060 (337-380)||(27911-27954)
scaffold0060 (337-380)||(71727-71770)
[»] scaffold0160 (1 HSPs)
scaffold0160 (326-380)||(25794-25848)
[»] scaffold0027 (1 HSPs)
scaffold0027 (326-380)||(11027-11081)
[»] scaffold0010 (1 HSPs)
scaffold0010 (348-380)||(134044-134076)


Alignment Details
Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 194 - 380
Target Start/End: Complemental strand, 27332200 - 27332025
Alignment:
Q  194 ctaaattttacaaagaatatattctttattttccacaaattattgtcgataaagagagaatactttcatcnnnnnnntagaataaaatggaaagtgatat 293  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  27332200 ctaagttttacaaagaatatattctttattttccacaaattattgtcgataaagagagaatactttcatcaaaaaaatagaataaaatggaaagtgatat 27332101  T
Q  294 tccgtccatcctacattatatgacaattgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||| ||||           |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  27332100 tccgtccgtcct-----------caattgactatttcatacatattaaaaagtgtaattaattttgtataagaaagtgatattatga 27332025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 27332370 - 27332246
Alignment:
Q  20 atcggagagaaacacaagagaaaatccattcaagaagaatgataaatatgcagtaataccggaaacacaatttcatataaccctttaatcatttgtcaaa 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27332370 atcggagagaaacacaagagaaaatccattcaagaagaatgataaatatgcagtaataccggaaacacaatttcatataaccctttaatcatttgtcaaa 27332271  T
Q  120 aaatatatatataaccctttaatcagtt 147  Q
    |||   | ||||||||||||||||||||    
T  27332270 aaa---aaatataaccctttaatcagtt 27332246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 37742889 - 37742833
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||| ||| |||||||    
T  37742889 atttcacacatattagaaaatgtaattaattttgtatgagaaagatatactatgaat 37742833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 337 - 380
Target Start/End: Complemental strand, 15269737 - 15269694
Alignment:
Q  337 attaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||| ||| |||||||||||||||||||||||||||||||    
T  15269737 attaaaaaatgtcattaattttgtatgagaaagagatattatga 15269694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 42695814 - 42695767
Alignment:
Q  333 acatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||    
T  42695814 acatattaaaaaatgtaattaattttatacgagaaagagatattatga 42695767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 1420699 - 1420753
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || |||||||||| |||| || ||||||||||||||||    
T  1420699 atttcatacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 1420753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 3376466 - 3376520
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||||||    
T  3376466 atttcacacatattaagaaatgtaattaatattgtgtgagaaagagatattatga 3376520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 10197853 - 10197906
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||| |||||| || |||||||||||||||||| ||||||||||||||||    
T  10197853 atttcatacgtattaagaa-tgtaattaattttgtatgggaaagagatattatga 10197906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 23498284 - 23498230
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || ||||||||||||||||    
T  23498284 atttcacacatattaaaaaatgtaattaatattgtgtgggaaagagatattatga 23498230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 28181521 - 28181575
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || ||||||||||||||||    
T  28181521 atttcacacatattaaaaaatgtaattaatattgtgtgggaaagagatattatga 28181575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 39235016 - 39235070
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || |||||||||| |||| || ||||||||||||||||    
T  39235016 atttcatacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 39235070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 18449957 - 18450017
Alignment:
Q  320 ttgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||| ||||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  18449957 ttgagtatttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatga 18450017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 13849297 - 13849352
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  13849297 tatttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 13849352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 20925730 - 20925785
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||| |||||| || ||||||||||||||| || |||||| |||||||||    
T  20925730 tatttcatacgtattaagaaatgtaattaattttgtgtgggaaagaaatattatga 20925785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 4826539 - 4826485
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  4826539 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 4826485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 6579949 - 6579895
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || | ||||||||||||||    
T  6579949 atttcacacatattaaaaaatgtaattaatattgtgtgggcaagagatattatga 6579895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 7491487 - 7491541
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  7491487 atttcacacatattaagaattgtaattaatattgtgtgggaaagagatattatga 7491541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 8247171 - 8247225
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  8247171 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 8247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 10877552 - 10877498
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  10877552 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 10877498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 12467877 - 12467823
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  12467877 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 12467823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 13375559 - 13375505
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| ||||||| |||||||||||    
T  13375559 atttcacacatattaagaaatgtaattaatattgtgtgagaaatagatattatga 13375505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 14527997 - 14527943
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  14527997 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 14527943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 15913268 - 15913226
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||| || ||||||||||||||||||| |||||||||||||    
T  15913268 tattaagaaatgtaattaattttgtatgataaagagatattat 15913226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 19576294 - 19576240
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  19576294 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 19576240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 25899247 - 25899193
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||| |||||||||| |||||||||| |||  || ||||||||||||||||    
T  25899247 atttcatatatattaaaaaatgtaattaatattgcgtgggaaagagatattatga 25899193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 28786757 - 28786811
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  28786757 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 28786811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 31909609 - 31909663
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || |||| |||||||||||    
T  31909609 atttcacacatattaaaaaatgtaattaatattgtttgggaaatagatattatga 31909663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 32674426 - 32674480
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  32674426 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 32674480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 36602061 - 36602115
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  36602061 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 36602115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 346 - 380
Target Start/End: Complemental strand, 39293577 - 39293543
Alignment:
Q  346 tgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||||||||||||| |||||||||||||||    
T  39293577 tgtaattaattttgtatgaaaaagagatattatga 39293543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 39408024 - 39407970
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  39408024 atttcacacatattaagaaatgtaattaatattgtgtgcgaaagagatattatga 39407970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 40172130 - 40172076
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| | ||||||| || |||||||||| ||||||| ||||||||||||||||    
T  40172130 atttcacatatattaagaaatgtaattaatattgtatgggaaagagatattatga 40172076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 40649299 - 40649245
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  40649299 atttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatga 40649245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 40833716 - 40833662
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||| |||| || |||||||||| |||| |||||||||||||||||||    
T  40833716 atttcacacattttaagaaatgtaattaatattgtgtgagaaagagatattatga 40833662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 41096173 - 41096119
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  41096173 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 41096119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 42056284 - 42056230
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  42056284 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 42056230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 44987963 - 44987909
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||| ||||||||||||||| || |||||||||| |||||    
T  44987963 atttcacacgtattaaaaaatgtaattaattttgtgtgggaaagagataatatga 44987909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 811040 - 810997
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||    
T  811040 tattaaaaa-tgtaattaattttgtatgtgaaagaaatattatga 810997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 380
Target Start/End: Complemental strand, 15848879 - 15848819
Alignment:
Q  320 ttgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||| ||||||| ||  ||||| || ||||||||||||||| || ||||||||||||||||    
T  15848879 ttgagtatttcacacgcattaagaaatgtaattaattttgtgtgggaaagagatattatga 15848819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 18649609 - 18649557
Alignment:
Q  320 ttgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagaga 372  Q
    ||||| ||||||  || ||||| ||||||||||||| ||||||||||||||||    
T  18649609 ttgaccatttcactcaaattaagaagtgtaattaatgttgtatgagaaagaga 18649557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Complemental strand, 32864196 - 32864164
Alignment:
Q  348 taattaattttgtatgagaaagagatattatga 380  Q
    ||||||||||||||||| |||||||||||||||    
T  32864196 taattaattttgtatgacaaagagatattatga 32864164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 6010147 - 6010201
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||| |||| ||||||||||||||| || ||||||||||||||||    
T  6010147 atttcatacatatttaaaaatgtaattaattttgtgtgggaaagagatattatga 6010201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 12000740 - 12000686
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| ||||||| ||||||||||||||||    
T  12000740 atttcacacatattaagaaatgtaattaatattgtatgggaaagagatattatga 12000686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 30087761 - 30087815
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||||||    
T  30087761 atttcacacatattaagaaatgtaattaatattgtgtgagaaagagatattatga 30087815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 31873453 - 31873507
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| ||  ||||||||| ||||||||||||||||||||||||    
T  31873453 atttcacacatattaagaaacgtaattaatattgtatgagaaagagatattatga 31873507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 36652682 - 36652628
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||| ||||||||||| || |||||||||| ||||||| ||||||||||||||||    
T  36652682 attttatacatattaagaaatgtaattaatattgtatgggaaagagatattatga 36652628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 37505203 - 37505149
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || ||||||||||||||||    
T  37505203 atttcacacatattaaaaaatgtaattaatattgtgtgggaaagagatattatga 37505149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 37954511 - 37954565
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| | ||||||| || |||||||||| ||||||||||||||||||||||||    
T  37954511 atttcacatatattaagaaatgtaattaatattgtatgagaaagagatattatga 37954565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 39645744 - 39645798
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||||||    
T  39645744 atttcacacatattaagaaatgtaattaatattgtgtgagaaagagatattatga 39645798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 5733191 - 5733235
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||    
T  5733191 tattaaaaaatgtaattaattttgtgtgggaaagagatattatga 5733235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 10278231 - 10278266
Alignment:
Q  327 tttcatacatattaaaaagtgtaattaattttgtat 362  Q
    |||||||||||||||||| |||||||||||||||||    
T  10278231 tttcatacatattaaaaaatgtaattaattttgtat 10278266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 24450766 - 24450711
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||| | |||||||||| |||||||||| |||| ||||||| |||||||||||    
T  24450766 tatttcacatatattaaaaaatgtaattaatattgtgtgagaaaaagatattatga 24450711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 600084 - 600138
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  600084 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 600138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 2099002 - 2099056
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  2099002 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 2099056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 7427203 - 7427257
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  7427203 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 7427257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 11587792 - 11587846
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || | |||||||| ||||||| ||||||||||||||||    
T  11587792 atttcacacatattaagaaatataattaatattgtatgggaaagagatattatga 11587846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 11714686 - 11714632
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  11714686 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 11714632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 12113379 - 12113433
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  12113379 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 12113433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 14433182 - 14433236
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || | |||||||| |||| || ||||||||||||||||    
T  14433182 atttcatacatattaagaaatataattaatattgtgtgggaaagagatattatga 14433236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 14809911 - 14809965
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||| ||| ||||||| ||||||||||||||||    
T  14809911 atttcacacatattaagaaatgtaataaatattgtatgggaaagagatattatga 14809965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 16999439 - 16999385
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| | |||||||||| |||||||||| |||| || ||||||||||||||||    
T  16999439 atttcacatatattaaaaaatgtaattaatattgtgtgggaaagagatattatga 16999385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 21582757 - 21582811
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || |||| |||||||||||    
T  21582757 atttcacacatattaaaaaatgtaattaatattgtgtgggaaaaagatattatga 21582811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 22453348 - 22453402
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  22453348 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 22453402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 24333256 - 24333202
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||||||  |||||||||||||||    
T  24333256 atttcacacatattaagaaatgtaattaatattgtatggaaaagagatattatga 24333202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 24422345 - 24422399
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  24422345 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 24422399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 27919459 - 27919513
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  27919459 atttcacacttattaagaaatgtaattaattttgtgtgggaaagagatattatga 27919513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 29949346 - 29949292
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  29949346 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 29949292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 30526405 - 30526351
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  30526405 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 30526351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 30597081 - 30597135
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  30597081 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 30597135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 31230512 - 31230566
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  31230512 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 31230566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 32395070 - 32395124
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  32395070 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 32395124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 32629626 - 32629680
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  32629626 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 32629680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 34865872 - 34865818
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  34865872 atttcacacctattaagaaatgtaattaattttgtgtgggaaagagatattatga 34865818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 34908929 - 34908875
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  34908929 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 34908875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 35544026 - 35544080
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || | |||||||| ||||||| ||||||||||||||||    
T  35544026 atttcacacatattaagaaatataattaatattgtatgggaaagagatattatga 35544080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 35631275 - 35631221
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  35631275 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 35631221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 39168823 - 39168877
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  39168823 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 39168877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 39284444 - 39284390
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  39284444 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 39284390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 41541013 - 41541067
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || | |||||||| ||||||| ||||||||||||||||    
T  41541013 atttcacacatattaagaaatataattaatattgtatgggaaagagatattatga 41541067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 42192258 - 42192312
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || |||||||||| |||| |  ||||||||||||||||    
T  42192258 atttcatacatattaagaaatgtaattaatattgtgtcggaaagagatattatga 42192312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 42946454 - 42946508
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  42946454 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 42946508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 42981441 - 42981387
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  42981441 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 42981387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 29938538 - 29938485
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatg 379  Q
    |||||| ||||||||| || |||||||||| |||| || |||||||||||||||    
T  29938538 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatg 29938485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 167823 - 167767
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || ||||||||||  ||| ||||||||| |||||||||||    
T  167823 atttcacacatattaagaaatgtaattaatactgtgtgagaaagaaatattatgaat 167767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 16422098 - 16422054
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||||||||| || ||||||||||||||||    
T  16422098 tattaagaaatgtaattaattttgtgtgggaaagagatattatga 16422054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 18185626 - 18185574
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||| ||||||||||| || ||||||||| ||||||||| ||||| |||||||    
T  18185626 attttatacatattaagaaatgtaattaactttgtatgaaaaagaaatattat 18185574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 18546310 - 18546274
Alignment:
Q  346 tgtaattaattttgtatgagaaagagatattatgaat 382  Q
    ||||||||||||||||||||||| | |||||||||||    
T  18546310 tgtaattaattttgtatgagaaaaatatattatgaat 18546274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 26747076 - 26747020
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| | ||||||| || |||||||||| |||| || ||||||||||||||||||    
T  26747076 atttcacatatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 26747020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 28481884 - 28481928
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||||||||||||  |||||||||||||||    
T  28481884 tattaataaatgtaattaattttgtatggaaaagagatattatga 28481928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 30510788 - 30510842
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||||||||||| ||||||||||||||||    
T  30510788 atttcacacatattaagaaatgtaattaattttgtatgggaaagagatattatga 30510842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 31004152 - 31004096
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||||||||    
T  31004152 atttcacacatattaagaaatgtaattaatattgtgtgagaaagagatattatgaat 31004096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 4981170 - 4981224
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||||||    
T  4981170 atttcacacatattaagaaatgtaattaatattgtgtgagaaagagatattatga 4981224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 7596106 - 7596052
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||| ||||||||||||||||||| ||||| |||||||||    
T  7596106 atttcacacgtattaaaaaatgtaattaattttgtatgataaagaaatattatga 7596052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 17360847 - 17360793
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||||||    
T  17360847 atttcacacatattaagaaatgtaattaatattgtgtgagaaagagatattatga 17360793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 19098766 - 19098713
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatg 379  Q
    |||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  19098766 atttcacacatattaagaaatgtaattaatattgtatgggaaagagatattatg 19098713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 5042961 - 5042909
Alignment:
Q  328 ttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||| ||||||| |||| |||||| |||||||||||||||| |||||||||||    
T  5042961 ttcacacatatttaaaaatgtaatcaattttgtatgagaaaaagatattatga 5042909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 17941855 - 17941799
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||||    
T  17941855 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 17941799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 32588924 - 32588868
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    ||||||||| |||||| || ||||||||||||||| || ||||| ||||||||||||    
T  32588924 atttcatacgtattaagaaatgtaattaattttgtgtgggaaagggatattatgaat 32588868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 377
Target Start/End: Original strand, 24557077 - 24557128
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatatta 377  Q
    ||||||||| |||||| || ||||||||||||| ||||||||||||| ||||    
T  24557077 atttcatacgtattaagaactgtaattaattttttatgagaaagagaaatta 24557128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 200288 - 200234
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  200288 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 1114383 - 1114437
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  1114383 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 1114437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 1779070 - 1779016
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  1779070 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 1779016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 3787340 - 3787286
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  3787340 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 3787286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 6612623 - 6612569
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  6612623 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 6612569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 9660259 - 9660313
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  9660259 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 9660313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 11173133 - 11173079
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  11173133 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 11173079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 12499504 - 12499558
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  12499504 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 12499558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 12509397 - 12509343
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  12509397 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 12509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 13631096 - 13631150
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  13631096 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 13631150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 13909909 - 13909856
Alignment:
Q  324 ctatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||||| | |||||||||| ||||||||||||||||||| ||| |||||||||    
T  13909909 ctatttcacaaatattaaaaaatgtaattaattttgtatga-aaaaagatattat 13909856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 14499356 - 14499302
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  14499356 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 14499302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 21858774 - 21858720
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  21858774 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 21858720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 26409295 - 26409241
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| | ||||||| || |||||||||| ||||||| ||||||||||||||||    
T  26409295 atttcacatatattaagaaatgtaattaatattgtatgggaaagagatattatga 26409241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 30739185 - 30739239
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  30739185 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 30739239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 381
Target Start/End: Original strand, 31712557 - 31712603
Alignment:
Q  335 atattaaaaagtgtaattaattttgtatgagaaagagatattatgaa 381  Q
    ||||||| || ||||||||||| | ||||||||||||||||||||||    
T  31712557 atattaagaaatgtaattaattgtatatgagaaagagatattatgaa 31712603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 35039868 - 35039922
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || ||||||||||||||| || |||||| |||||||||    
T  35039868 atttcacacatattaagaaatgtaattaattttgtgtgggaaagaaatattatga 35039922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 3401445 - 3401482
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatg 363  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  3401445 atttcatacgtattaaaaaatgtaattaattttgtatg 3401482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 382
Target Start/End: Original strand, 10364493 - 10364542
Alignment:
Q  333 acatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    ||||||||| || |||||||||| |||| || ||||||||||||||||||    
T  10364493 acatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 10364542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 17442054 - 17441998
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || | |||||||| |||| || ||||||||||||||||||    
T  17442054 atttcacacatattaagaaatataattaatattgtgtgggaaagagatattatgaat 17441998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 30240444 - 30240400
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||||||||| || ||||||||||||||||    
T  30240444 tattaagaaatgtaattaattttgtgtgggaaagagatattatga 30240400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 34218944 - 34218996
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||| || |||||| || |||||||| |||||| |||||||||||||||||    
T  34218944 atttcacacctattaagaaatgtaattacttttgtgtgagaaagagatattat 34218996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 4227994 - 4227940
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  4227994 atttcacacatattaaaaaatgtaattaatattgtatgggaaagagatattatga 4227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 16436304 - 16436250
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| ||||||||||||||||||||||||    
T  16436304 atttcacacatattaagaaatgtaattaatattgtatgagaaagagatattatga 16436250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 16629887 - 16629941
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||||||    
T  16629887 atttcacacatattaagaaatgtaattaatattgtgtgagaaagagatattatga 16629941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 32162245 - 32162299
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || |||||||||| |||| || ||||||||||||||||    
T  32162245 atttcatacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 32162299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 38817096 - 38817042
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || ||||||||||||||||    
T  38817096 atttcacacatattaaaaaatgtaattaatattgtgtgggaaagagatattatga 38817042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 49367272 - 49367326
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || ||||||||||||||| || ||||||||||||||||    
T  49367272 atttcacacatattaagaaatgtaattaattttgtgtgggaaagagatattatga 49367326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 5432168 - 5432223
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  5432168 tatttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 5432223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 6260601 - 6260566
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgta 361  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6260601 atttcatacatattaaaaaatgtaattaattttgta 6260566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 3280894 - 3280948
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || | ||||||||||||| |||||||||||||||||||    
T  3280894 atttcacacgtattaagaaatataattaattttgtctgagaaagagatattatga 3280948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 5653521 - 5653575
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  5653521 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 5653575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 10085959 - 10085905
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  10085959 atttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatga 10085905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 13985310 - 13985356
Alignment:
Q  334 catattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||||| |||||||||| |||| || ||||||||||||||||    
T  13985310 catattaaaaaatgtaattaatattgtgtgggaaagagatattatga 13985356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 14149236 - 14149290
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| | ||||||| || |||||||||||||| ||| ||||||||||||||||    
T  14149236 atttcacatatattaagaaatgtaattaattttgcatgggaaagagatattatga 14149290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 15574897 - 15574951
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  15574897 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 15574951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 16011395 - 16011449
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  16011395 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 16011449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 18127583 - 18127529
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  18127583 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 18127529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 25984623 - 25984569
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  25984623 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 25984569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 26333317 - 26333371
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  26333317 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 26333371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 26541055 - 26541109
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  26541055 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 26541109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 30679521 - 30679467
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  30679521 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 30679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 346 - 376
Target Start/End: Complemental strand, 32472928 - 32472898
Alignment:
Q  346 tgtaattaattttgtatgagaaagagatatt 376  Q
    |||||||||||||||||||||||||||||||    
T  32472928 tgtaattaattttgtatgagaaagagatatt 32472898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 34347519 - 34347465
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  34347519 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 34347465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 34967364 - 34967418
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  34967364 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 34967418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 38239112 - 38239058
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  38239112 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 38239058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 39282780 - 39282726
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  39282780 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 39282726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 40403730 - 40403784
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  40403730 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 40403784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 42334291 - 42334345
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  42334291 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 42334345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 42379439 - 42379385
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || |||| |||||||||||    
T  42379439 atttcacacatattaaaaaatgtaattaatattgtgtgggaaaaagatattatga 42379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 44343677 - 44343731
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  44343677 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 44343731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 47393415 - 47393469
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  47393415 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 47393469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 51560994 - 51560940
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| ||||||| |||||||||||    
T  51560994 atttcacacatattaagaaatgtaattaatattgtgtgagaaatagatattatga 51560940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 24584031 - 24583978
Alignment:
Q  327 tttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  24584031 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 24583978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 24589745 - 24589692
Alignment:
Q  327 tttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  24589745 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 24589692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 35096861 - 35096808
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    ||||||| ||||||||| || |||||||||| |||| || ||||||||||||||    
T  35096861 tatttcacacatattaagaattgtaattaatattgtgtgggaaagagatattat 35096808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 7572348 - 7572392
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||| ||||||||||||||| || ||||| ||||||||||    
T  7572348 tattaaaaaatgtaattaattttgtgtgggaaagcgatattatga 7572392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 380
Target Start/End: Original strand, 16689218 - 16689258
Alignment:
Q  340 aaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  16689218 aaaaaatgtaataaattttgtatgggaaagagatattatga 16689258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 24681142 - 24681106
Alignment:
Q  346 tgtaattaattttgtatgagaaagagatattatgaat 382  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  24681142 tgtaattaattttgtttgagaaagagaaattatgaat 24681106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 27999868 - 27999816
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||||||||||||| || || ||||||| |||| || ||||||||||||||    
T  27999868 atttcatacatattaagaaatgcaattaatattgtgtgcgaaagagatattat 27999816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 28979616 - 28979676
Alignment:
Q  320 ttgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||| ||| ||||| || ||||||||| ||||||| | ||||| |||||||||    
T  28979616 ttgactatttcacacacattaataaatgtaattaagtttgtataaaaaagatatattatga 28979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 31045376 - 31045432
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| ||  |||||||||||||||||    
T  31045376 atttcacacatattaagaaatgtaattaatattgtgtgttaaagagatattatgaat 31045432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 35150058 - 35150102
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||| | |||||||||||| |||| |||||||||||||||    
T  35150058 tattaaaaaatttaattaattttgcatgaaaaagagatattatga 35150102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 52178021 - 52177977
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||||||||| || ||||||||||||||||    
T  52178021 tattaagaaatgtaattaattttgtgtgggaaagagatattatga 52177977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 6328405 - 6328352
Alignment:
Q  327 tttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||| || ||||||||| |||||||||||||||||||||| ||||||||||||    
T  6328405 tttcacacgtattaaaaaatgtaattaattttgtatgagaatgagatattatga 6328352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 20540286 - 20540340
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| |||||||||||||||||||    
T  20540286 atttcacacatattaagaaatgtaattaatattgtgtgagaaagagatattatga 20540340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 55968789 - 55968735
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| ||||||||||||| |||| || ||||||||||||||||    
T  55968789 atttcacacatattaagaagtgtaattaatattgtgtgggaaagagatattatga 55968735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 55984147 - 55984201
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| ||||||||||||| |||| || ||||||||||||||||    
T  55984147 atttcacacatattaagaagtgtaattaatattgtgtgggaaagagatattatga 55984201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 22019338 - 22019282
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||||    
T  22019338 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 22019282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 388291 - 388237
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  388291 atttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatga 388237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 596183 - 596237
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || |||| |||||||||||    
T  596183 atttcacacatattaaaaaatgtaattaatattgtgtgggaaatagatattatga 596237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 3506258 - 3506204
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||| |||| |||||||||| || ||||| |||||||||||||||    
T  3506258 atttcacacatatttaaaaatgtaattaatattatatgaaaaagagatattatga 3506204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 4293962 - 4294016
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  4293962 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 4294016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 6284229 - 6284175
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||||||||| | |||||||||||    
T  6284229 atttcacacgtattaagaaatgtaattaattttgtatgagacatagatattatga 6284175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 11116401 - 11116455
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||| |||| |||||||||||||||||  ||||||||||||||||    
T  11116401 atttcacacgtattcaaaaatgtaattaattttgtataggaaagagatattatga 11116455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 11248781 - 11248835
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  11248781 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 11248835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 16833637 - 16833691
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||| |||||||||| || | |||||||||||||||||||    
T  16833637 atttcacacgtattaaaaaatgtaattaatattatttgagaaagagatattatga 16833691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 20180615 - 20180561
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  20180615 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 20180561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 23137933 - 23137879
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  23137933 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 23137879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 23621870 - 23621816
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || |||| |||||||||||    
T  23621870 atttcacacatattaaaaaatgtaattaatattgtgtgggaaaaagatattatga 23621816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 26740250 - 26740304
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  26740250 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 26740304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 26882971 - 26882917
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  26882971 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 26882917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 29290144 - 29290198
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  29290144 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 29290198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 29494796 - 29494850
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  29494796 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 29494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 35876876 - 35876930
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||  |||||||||||||||||||    
T  35876876 atttcacacatattaagaaatgtaattaatattgggtgagaaagagatattatga 35876930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 39717570 - 39717517
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| | |||||||||||||||| ||||| ||||||||||    
T  39717570 atttcagacatattaaaaaat-taattaattttgtatgtgaaagtgatattatga 39717517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 41987996 - 41988050
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  41987996 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 41988050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 45250318 - 45250264
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  45250318 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 45250264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 48380821 - 48380767
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  48380821 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 48380767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 13252201 - 13252254
Alignment:
Q  327 tttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  13252201 tttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 13252254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 16959037 - 16959082
Alignment:
Q  337 attaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||||| ||||||||||||||||||||| ||||| ||| |||||    
T  16959037 attaaaaaatgtaattaattttgtatgagatagagaaattgtgaat 16959082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 37912691 - 37912638
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatg 379  Q
    |||||||||||||||| || |||||||||| |||| ||  ||||||||||||||    
T  37912691 atttcatacatattaagaaatgtaattaatattgtgtggaaaagagatattatg 37912638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 379
Target Start/End: Original strand, 42629615 - 42629668
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatg 379  Q
    |||||| ||||||||| || |||||||||| |||| || |||||||||||||||    
T  42629615 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatg 42629668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 5388406 - 5388350
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || ||||| |||| |||| || ||||||||||||||||||    
T  5388406 atttcacacatattaagaaatgtaactaatattgtgtgggaaagagatattatgaat 5388350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 10672903 - 10672847
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| || ||||||||| | ||||||||||||||||  ||||| |||||||||||    
T  10672903 atttcacacgtattaaaaattataattaattttgtatggaaaagaaatattatgaat 10672847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 10886543 - 10886487
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| || ||||||||| | ||||||||||||||||  ||||| |||||||||||    
T  10886543 atttcacacgtattaaaaattataattaattttgtatggaaaagaaatattatgaat 10886487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 380
Target Start/End: Complemental strand, 20978243 - 20978183
Alignment:
Q  320 ttgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||| ||| |||||| |||||| || ||||||||||||| | ||||||||| |||||||||    
T  20978243 ttgaatatatcatacgtattaagaaatgtaattaattttatgtgagaaagaaatattatga 20978183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Original strand, 29462565 - 29462597
Alignment:
Q  348 taattaattttgtatgagaaagagatattatga 380  Q
    ||||||||||| |||||||||||||||||||||    
T  29462565 taattaattttctatgagaaagagatattatga 29462597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 32385393 - 32385449
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || | ||||||||||||| || |||| |||||||||||||    
T  32385393 atttcacacatattaagaaatataattaattttgtgtgggaaatagatattatgaat 32385449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 34247003 - 34246947
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || |||| |||||||||||||    
T  34247003 atttcacacatattaagaaatgtaattaatattgtgtgggaaatagatattatgaat 34246947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 35340826 - 35340790
Alignment:
Q  346 tgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||||||||||||||  ||||||||||||||||||    
T  35340826 tgtaattaattttgtatatgaaagagatattatgaat 35340790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 39613000 - 39612928
Alignment:
Q  308 attatatgacaattgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||| | ||||  ||||||||||||||||||| |||||||||||||||||   ||||| |||||||||    
T  39613000 attatatgatatttgatcatttcatacatattaaaaaatgtaattaattttgtattgaaaagaaatattatga 39612928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 380
Target Start/End: Original strand, 86630 - 86678
Alignment:
Q  332 tacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||| || ||||||||||||||| || ||||||||||||||||    
T  86630 tacatattaagaaatgtaattaattttgtgtgggaaagagatattatga 86678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 380
Target Start/End: Original strand, 40275225 - 40275268
Alignment:
Q  337 attaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||| || ||||||||||||||| |||||||||||||||||||    
T  40275225 attaagaaatgtaattaattttgtgtgagaaagagatattatga 40275268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 33688 - 33742
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || | ||||||||||||| || |||| |||||||||||    
T  33688 atttcatacatattaagaaatataattaattttgtgtgggaaaaagatattatga 33742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 1122630 - 1122576
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  1122630 atttcacacatattaataaatgtaattaatattgtgtgggaaagagatattatga 1122576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 2606454 - 2606508
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  2606454 atttcacacatattaataaatgtaattaatattgtgtgggaaagagatattatga 2606508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 4047636 - 4047690
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  4047636 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 4047690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 4456641 - 4456587
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| | ||||||| || |||||||||| ||||||| ||||||||||||||||    
T  4456641 atttcacatatattaagaaatgtaattaatattgtatgggaaagagatattatga 4456587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 7414863 - 7414809
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  7414863 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 7414809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 9201378 - 9201328
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatat 375  Q
    ||||||| ||||||||| || |||||||||| |||| ||||||||||||||    
T  9201378 tatttcacacatattaagaaatgtaattaatattgtgtgagaaagagatat 9201328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 9461606 - 9461552
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  9461606 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 9461552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 27187246 - 27187300
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  27187246 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 27187300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 29000749 - 29000803
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  29000749 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 29000803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 34606829 - 34606883
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  34606829 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 34606883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 35189423 - 35189369
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  35189423 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 35189369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 35870178 - 35870124
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  35870178 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 35870124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 36302292 - 36302346
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  36302292 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 36302346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 36347240 - 36347294
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  36347240 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 36347294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 39895833 - 39895887
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  39895833 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 39895887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 42941014 - 42940960
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  42941014 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 42940960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 10164917 - 10164868
Alignment:
Q  333 acatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    ||||||||| || |||||||||| |||| || ||||||||||||||||||    
T  10164917 acatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 10164868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 6923247 - 6923199
Alignment:
Q  334 catattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||||| || |||||||||| |||| ||||||| |||||||||||||    
T  6923247 catattaagaaatgtaattaatattgtgtgagaaatagatattatgaat 6923199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 380
Target Start/End: Complemental strand, 7196866 - 7196806
Alignment:
Q  320 ttgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||| |||||| ||| ||||| || ||||||||||||||||||| ||||| | |||||||    
T  7196866 ttgaccatttcacacaaattaagaaatgtaattaattttgtatgataaagaaaaattatga 7196806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 10370790 - 10370742
Alignment:
Q  332 tacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||| || |||||||||| |||| || ||||||||||||||||    
T  10370790 tacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 10370742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 10601861 - 10601917
Alignment:
Q  324 ctatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||| ||||||||| || |||||||||| || | ||||||| |||||||||||    
T  10601861 ctatttcacacatattaagaaatgtaattaatattatgtgagaaatagatattatga 10601917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 15268317 - 15268361
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||||||||||||||| |||| |||||||||||    
T  15268317 tattaagaaatgtaattaattttgtatgggaaaaagatattatga 15268361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Complemental strand, 16626483 - 16626439
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||||||||| || ||||||||||||||||    
T  16626483 tattaagaaatgtaattaattttgtgtgggaaagagatattatga 16626439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 31196087 - 31196143
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| || ||||||||| ||||||||||||| | || |||| |||||||||||||    
T  31196087 atttcacacgtattaaaaaatgtaattaattttatgtgggaaatagatattatgaat 31196143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 63592 - 63538
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || ||||||||||||||||    
T  63592 atttcacacatattaaaaaatgtaattaatattgtgtgggaaagagatattatga 63538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 28234174 - 28234228
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || ||||||||||||||||    
T  28234174 atttcacacatattaaaaaatgtaattaatattgtgtgggaaagagatattatga 28234228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 34275488 - 34275542
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || |||||||||| |||| || ||||||||||||||||    
T  34275488 atttcatacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 34275542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 42688559 - 42688613
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || |||||||||| |||| || ||||||||||||||||    
T  42688559 atttcatacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 42688613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 44894607 - 44894661
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||||||||| || |||||||||| |||| || ||||||||||||||||    
T  44894607 atttcatacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 44894661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 12118652 - 12118709
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    ||||||| ||||||||| || |||||||||| |||| || ||||||||||||||||||    
T  12118652 tatttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 12118709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 8612061 - 8612009
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||| |||||||||||| |||||||||| |||| || ||||||||||||||    
T  8612061 atttcacacatattaaaaaatgtaattaatattgtgtgggaaagagatattat 8612009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 22624562 - 22624506
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||||    
T  22624562 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 22624506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 27330467 - 27330415
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    ||||||| |||||||| || ||||||||||||||||||||||| | |||||||    
T  27330467 atttcatgcatattaagaaatgtaattaattttgtatgagaaaaatatattat 27330415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 4089790 - 4089735
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||||| |||||| || ||||||||||||||||||  ||| |||||||||||    
T  4089790 tatttcatacgtattaagaaatgtaattaattttgtatggaaaaaagatattatga 4089735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 2649148 - 2649094
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  2649148 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 2649094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 3225683 - 3225629
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  3225683 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 3225629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 4513393 - 4513447
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  4513393 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 4513447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 9417636 - 9417690
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  9417636 atttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatga 9417690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 376
Target Start/End: Original strand, 11910467 - 11910517
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatatt 376  Q
    ||||||||||||||||||| | |||||||| |||| || ||||||||||||    
T  11910467 atttcatacatattaaaaaatataattaatattgtgtgggaaagagatatt 11910517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 13446215 - 13446161
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  13446215 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 13446161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 18235133 - 18235079
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  18235133 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 18235079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 21106018 - 21106071
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    ||||||||  ||||||||| | ||||||||||||||||| |||||||||||||||    
T  21106018 atttcatatgtattaaaaaat-taattaattttgtatgaaaaagagatattatga 21106071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 21443270 - 21443228
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||    
T  21443270 tattaaaaaatgtaattaattttgtatgggaaagagatgttat 21443228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 22706797 - 22706851
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || ||||||||||||||| || |||||| |||||||||    
T  22706797 atttcacacatattaagaaatgtaattaattttgtgtgggaaagaaatattatga 22706851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 24923409 - 24923463
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  24923409 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 24923463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 28536665 - 28536719
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  28536665 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 28536719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 29155527 - 29155581
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  29155527 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 29155581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 29985803 - 29985857
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  29985803 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 29985857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 32778054 - 32778000
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||| |||||| ||||||||||||||||    
T  32778054 atttcacacgtattaagaaatgtaattaattatgtatgggaaagagatattatga 32778000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 35542208 - 35542154
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  35542208 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 35542154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 37115980 - 37115926
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  37115980 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 37115926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 39199294 - 39199240
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  39199294 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 39199240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 44187130 - 44187076
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  44187130 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 44187076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 44481234 - 44481180
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  44481234 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 44481180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 45780695 - 45780749
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  45780695 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 45780749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 46944522 - 46944576
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| | |||||||| |||| || ||||||||||||||||    
T  46944522 atttcacacatattaaaaaatataattaatattgtgtgggaaagagatattatga 46944576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 1643539 - 1643595
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || ||||||||||  ||| || ||||||||||||||||||    
T  1643539 atttcacacatattaagaaatgtaattaatactgtgtgggaaagagatattatgaat 1643595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 3783858 - 3783802
Alignment:
Q  320 ttgactatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatatt 376  Q
    |||||||||| | || |||||| || |||||||||| |||||||||||| |||||||    
T  3783858 ttgactattttacacgtattaagaaatgtaattaatattgtatgagaaatagatatt 3783802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 19866320 - 19866364
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||||||||| || ||||||||||||||||    
T  19866320 tattaagaaatgtaattaattttgtgtgggaaagagatattatga 19866364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 21553609 - 21553557
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    ||||||||| |||||| || | ||||||||||||||||| ||| |||||||||    
T  21553609 atttcatacttattaagaaatataattaattttgtatgaaaaatagatattat 21553557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 22368971 - 22369027
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || |||||| |||||||||||    
T  22368971 atttcacacatattaagaaatgtaattaatattgtgtgggaaagaaatattatgaat 22369027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 31542571 - 31542515
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    ||||||||  |||||| || | ||||||||||||| || ||||||||||||||||||    
T  31542571 atttcatatctattaagaaatataattaattttgtgtgggaaagagatattatgaat 31542515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 43468307 - 43468359
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||    
T  43468307 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattat 43468359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 46373036 - 46373092
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || |||| |||||||||||||    
T  46373036 atttcacacatattaagaaatgtaattaatattgtgtgggaaaaagatattatgaat 46373092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 48841074 - 48841118
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||||||||||||||||||| |||||| |||||    
T  48841074 tattaagaaatgtaattaattttgtatgagaatgagatactatga 48841118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 376
Target Start/End: Original strand, 39144440 - 39144490
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatatt 376  Q
    |||||| || ||||||||| | |||||||||||||||||||||||||||||    
T  39144440 atttcacacgtattaaaaaatataattaattttgtatgagaaagagatatt 39144490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 52040283 - 52040337
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || ||||||||||||||||    
T  52040283 atttcacacatattaaaaaatgtaattaatattgtgtgggaaagagatattatga 52040337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 54747743 - 54747797
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| | |||||||| |||| |||||||||||||||||||    
T  54747743 atttcacacatattaaaaaatataattaatattgtgtgagaaagagatattatga 54747797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 8108683 - 8108627
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||||    
T  8108683 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 8108627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 380
Target Start/End: Original strand, 14343805 - 14343849
Alignment:
Q  336 tattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || ||||||||||||||||||| |||||||||||||||    
T  14343805 tattaagaaatgtaattaattttgtatgaaaaagagatattatga 14343849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 38999692 - 38999640
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||| ||||||||| || |||||||||| ||||||| ||||||||||||||    
T  38999692 atttcacacatattaagaaatgtaattaatattgtatgggaaagagatattat 38999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 42939609 - 42939665
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||||||||||||| || | |||||||| |||| || ||||||||||||||||||    
T  42939609 atttcatacatattaagaaatataattaatattgtgtgggaaagagatattatgaat 42939665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 47241410 - 47241354
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||||    
T  47241410 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatgaat 47241354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 377
Target Start/End: Original strand, 8096647 - 8096698
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatatta 377  Q
    |||||| ||||||||| || |||||||||| |||| ||||||||||||||||    
T  8096647 atttcacacatattaagaaatgtaattaatattgtttgagaaagagatatta 8096698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 1540898 - 1540844
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  1540898 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 1540844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 4047112 - 4047166
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  4047112 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 4047166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 19960859 - 19960913
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  19960859 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 19960913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 20394025 - 20394079
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  20394025 atttcacacgtattaagaaatgtaattaattttgtgtgggaaagagatattatga 20394079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 21216700 - 21216754
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| ||||||| |||| |||||||||||    
T  21216700 atttcacacatattaagaaatgtaattaatattgtatgggaaatagatattatga 21216754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 23609267 - 23609321
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  23609267 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 23609321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 25903942 - 25903996
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||| ||| |||||||||| |||| || ||||||||||||||||    
T  25903942 atttcacacatattataaaatgtaattaatattgtgtgggaaagagatattatga 25903996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 27848719 - 27848773
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  27848719 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 27848773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 28227219 - 28227165
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  28227219 atttcagacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 28227165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 29227204 - 29227258
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| | ||||||| || |||||||||| ||||||| ||||||||||||||||    
T  29227204 atttcacatatattaagaaatgtaattaatattgtatgggaaagagatattatga 29227258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 29343450 - 29343396
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  29343450 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 29343396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 30358964 - 30358910
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| |||||||||||| |||||||||| |||| || |||| |||||||||||    
T  30358964 atttcacacatattaaaaaatgtaattaatattgtgtgggaaatagatattatga 30358910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 32100115 - 32100169
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||| ||||| || |||||||||| |||| |||||||||||||||||||    
T  32100115 atttcacacaaattaagaaatgtaattaatattgtgtgagaaagagatattatga 32100169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 38096277 - 38096223
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  38096277 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 38096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 40164076 - 40164130
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| ||| |||||||||||||||    
T  40164076 atttcacacatattaagaaatgtaattaatattgtgtgaaaaagagatattatga 40164130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 41751349 - 41751295
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  41751349 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 41751295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 42490544 - 42490490
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  42490544 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 42490490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 43175982 - 43175928
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  43175982 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 43175928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 47054244 - 47054190
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  47054244 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 47054190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 47895672 - 47895618
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||||||||||||| || | |||||||||    
T  47895672 atttcacacatattaagaaatgtaattaattttgtatgaggaaaatatattatga 47895618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 48333956 - 48333902
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  48333956 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 48333902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 48897073 - 48897127
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||| ||||||||||| || |||||||||| |||| ||||||| |||||||||||    
T  48897073 attttatacatattaagaaatgtaattaatattgtgtgagaaatagatattatga 48897127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 49384287 - 49384341
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  49384287 atttcacacatattaacaaatgtaattaatattgtgtgggaaagagatattatga 49384341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 52060305 - 52060359
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  52060305 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 52060359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 53655000 - 53655054
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  53655000 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 53655054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 3428879 - 3428931
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||| || |||||| || | |||||||||||| ||||||||||||||||||    
T  3428879 atttcacacgtattaataaatttaattaattttgcatgagaaagagatattat 3428931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 23782435 - 23782379
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| |  ||||||||||||||||||    
T  23782435 atttcacacatattaagaaatgtaattaatattgtgttggaaagagatattatgaat 23782379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 34663678 - 34663622
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatgaat 382  Q
    |||||| ||||||||| || |||||||||| |||| || |||||| |||||||||||    
T  34663678 atttcacacatattaagaaatgtaattaatattgtgtgggaaagaaatattatgaat 34663622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 44804762 - 44804814
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||| || |||||| || | ||||||||||||||||||||| |||||||||    
T  44804762 atttcacacgtattaagaaatataattaattttgtatgagaaatagatattat 44804814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 45674153 - 45674205
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||    
T  45674153 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattat 45674205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 20705 - 20652
Alignment:
Q  325 tatttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattat 378  Q
    |||||||||| |||||| || ||||||||||||||| || ||||||||||||||    
T  20705 tatttcatacgtattaagaaatgtaattaattttgtttgggaaagagatattat 20652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 380
Target Start/End: Original strand, 27911 - 27954
Alignment:
Q  337 attaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||    
T  27911 attaaaaaatgtaattaattttgtacgagaatgagatattatga 27954  T

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Target: scaffold0060; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 337 - 380
Target Start/End: Original strand, 71727 - 71770
Alignment:
Q  337 attaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||    
T  71727 attaaaaaatgtaattaattttgtacgagaatgagatattatga 71770  T

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Target: scaffold0160 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 25794 - 25848
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| ||||||||| || |||||||||| |||| || ||||||||||||||||    
T  25794 atttcacacatattaagaaatgtaattaatattgtgtgggaaagagatattatga 25848  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 11027 - 11081
Alignment:
Q  326 atttcatacatattaaaaagtgtaattaattttgtatgagaaagagatattatga 380  Q
    |||||| || |||||| || ||||||||||||||| || ||||||||||||||||    
T  11027 atttcacacgtattaagaattgtaattaattttgtgtgggaaagagatattatga 11081  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 380
Target Start/End: Complemental strand, 134076 - 134044
Alignment:
Q  348 taattaattttgtatgagaaagagatattatga 380  Q
    ||||||||||||||||||||| |||||||||||    
T  134076 taattaattttgtatgagaaaaagatattatga 134044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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