View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16068_low_73 (Length: 266)
Name: NF16068_low_73
Description: NF16068
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16068_low_73 |
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Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 8007292 - 8007042
Alignment:
| Q |
1 |
tgcaactaacatgtcatatctctgttccatcccattctctatatactatgagatactcaatcatttacattattcattgtatcactccctccatcaacat |
100 |
Q |
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| T |
8007292 |
tgcaactaacatgtcatatctctgttccatcccattctctatatactatgagatactcaatcatttacattattcattgtatcactccctccatcaacat |
8007193 |
T |
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| Q |
101 |
atagcatctattggttccatttggaccataaaataatatggaatccaactttgatgaacttcatcaaccaatattaactcatgatcatccaccaccacct |
200 |
Q |
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| T |
8007192 |
atagcatctattggttccatttggaccataaaataatatggaatccaactttgatgaacttcatcaaccaatattaactcatgatcatccaccaccacct |
8007093 |
T |
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| Q |
201 |
gaactgaattctagtcttgaagaagtgttatcaaacactcagttacctttg |
251 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
8007092 |
gaactgaattctagtcttgaagaaatgttatcaaacactcagttacctttg |
8007042 |
T |
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