View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1606_low_21 (Length: 261)

Name: NF1606_low_21
Description: NF1606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1606_low_21
NF1606_low_21
[»] chr7 (2 HSPs)
chr7 (19-251)||(7969915-7970142)
chr7 (19-249)||(37576971-37577196)
[»] chr5 (11 HSPs)
chr5 (26-249)||(25469427-25469645)
chr5 (23-236)||(32739955-32740163)
chr5 (25-249)||(32767752-32767971)
chr5 (19-242)||(32762859-32763077)
chr5 (19-242)||(28474719-28474937)
chr5 (53-238)||(32651863-32652048)
chr5 (53-221)||(32858129-32858297)
chr5 (23-243)||(32656093-32656308)
chr5 (57-242)||(32662009-32662194)
chr5 (19-60)||(25477494-25477535)
chr5 (63-140)||(32710150-32710227)
[»] chr1 (2 HSPs)
chr1 (19-246)||(17583355-17583577)
chr1 (21-248)||(17591260-17591482)
[»] chr2 (2 HSPs)
chr2 (53-249)||(16756838-16757034)
chr2 (23-248)||(16752334-16752554)
[»] chr4 (1 HSPs)
chr4 (19-221)||(21524430-21524630)


Alignment Details
Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 7969915 - 7970142
Alignment:
Q  19 gggggttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttgga 118  Q
    ||||||||||||||| |||| ||||||||||||     |||||||| |||||||||||| ||||||||||||| ||||||| |||| |||| | ||||||    
T  7969915 gggggttatgcaaatgtctagcttgagaggttc-----agaagaacgaaatggaatcacaaggaactctgatgaaagagttgctaaagtaaactgttgga 7970009  T
Q  119 cattcttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagca 218  Q
    | |||||||||||||| ||||||| ||| || | | ||| |||||||||| ||||||||||||||||||  ||| |||||||||| || |||||||||||    
T  7970010 cgttcttcgcaaaagactgtaatttcagtttgcatatctcagacttagccgatatatcataactatactcggacccagaagagttaggaccaatgcagca 7970109  T
Q  219 aatgttgaccgcgtttcccaaaagcatagtatt 251  Q
    ||| ||||| || |||||||||  |||||||||    
T  7970110 aatattgactgcttttcccaaactcatagtatt 7970142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 37577196 - 37576971
Alignment:
Q  19 gggggttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttgga 118  Q
    ||||| |||||||||||||| || |||||||||||     ||||||||||||||||||| ||||||||| ||| |||||||  ||| |||| |||||| |    
T  37577196 gggggatatgcaaatttctagctcgagaggttcag-----aagaaccaaatggaatcacaaggaactctaatgaaagagttgataaagtaaaccgttgca 37577102  T
Q  119 cattcttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagca 218  Q
    ||||||||||||| || || |||| | | || | ||  |||||  |||||||||||||||||| | |||   ||| |||||| ||||| | |||||| ||    
T  37577101 cattcttcgcaaacgactgaaatttcggtttgcatgcttgagatctagccaatatatcataaccacactcgtactgagaagactttggactaatgcaaca 37577002  T
Q  219 aatgttgaccgcgtttcccaaaagcatagta 249  Q
    ||| ||||  || ||||| ||||||||||||    
T  37577001 aatattgattgcatttccaaaaagcatagta 37576971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 249
Target Start/End: Complemental strand, 25469645 - 25469427
Alignment:
Q  26 atgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacattctt 125  Q
    |||||||||||||||| |||||||||||     || |||||||||||||||| ||||||| ||||| ||||||||  || ||||||||||||||||||||    
T  25469645 atgcaaatttctatctcgagaggttcag-----aaaaaccaaatggaatcacaaggaactttgatgaaagagttttcaaagtaacccgttggacattctt 25469551  T
Q  126 cgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaatgttg 225  Q
    |||||||| ||| |||| ||||| |||  ||| |||   ||| || |||| |||||||||||| ||||||||||| ||||| |||||||||||||  |||    
T  25469550 cgcaaaagtgtgaaatttcagctcactcatcttagaacaagctaaaatattataactatacttggactcagaagattttggaccaatgcagcaaacattg 25469451  T
Q  226 accgcgtttcccaaaagcatagta 249  Q
    |||||||||||||||| |||||||    
T  25469450 accgcgtttcccaaaaacatagta 25469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 32740163 - 32739955
Alignment:
Q  23 gttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacatt 122  Q
    |||||||||||||||| ||||||||||||||     |||||| |||||||||||| ||||||| ||||| |||| || |||| |||| | ||||||||||    
T  32740163 gttatgcaaatttctaacttgagaggttcag-----aagaactaaatggaatcacaaggaactttgatgaaagatttgctaaagtaatctgttggacatt 32740069  T
Q  123 cttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaatg 222  Q
    ||| |||||||||||||||| ||| |||| | |||||||| ||||||||||||| ||||||||||  |||||||||| || ||| |||| |||||||||     
T  32740068 cttggcaaaagagtgtaatttcagtttacatatctgagacgtagccaatatatcgtaactatactcagactcagaagcgtctggaccaaagcagcaaata 32739969  T
Q  223 ttgaccgcgtttcc 236  Q
    ||||| || |||||    
T  32739968 ttgacagcatttcc 32739955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 249
Target Start/End: Complemental strand, 32767971 - 32767752
Alignment:
Q  25 tatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacattct 124  Q
    |||||||||||||| |||||| |     |||||||||| |||| ||||||||| |||| |||||||||||||||| |||| |||| | | |||||||| |    
T  32767971 tatgcaaatttctagcttgagtg-----gttcagaagagccaactggaatcacaaggagctctgatggaagagttgctaaagtaaactgctggacatttt 32767877  T
Q  125 tcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaatgtt 224  Q
    || ||||||| ||||||| ||| || | |||||||||| ||||||||||||||||||||||||  |||||||| ||||| || |||||||||||||| |     
T  32767876 tcacaaaagactgtaatttcagtttgcatgtctgagacctagccaatatatcataactatactcggactcagaggagttaggaccaatgcagcaaatata 32767777  T
Q  225 gaccgcgtttcccaaaagcatagta 249  Q
    ||| || ||||| ||||| ||||||    
T  32767776 gactgcatttcctaaaagtatagta 32767752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 32763077 - 32762859
Alignment:
Q  19 gggggttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttgga 118  Q
    ||||||||||||||| |||| |||||||||||| |     ||||| ||||||||||||| || |||||||||| ||||||| |||| | ||| |||||||    
T  32763077 gggggttatgcaaatatctagcttgagaggttcgg-----aagaagcaaatggaatcacaagaaactctgatgaaagagttgctaaagcaacacgttgga 32762983  T
Q  119 cattcttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagca 218  Q
    | |||||| ||||||| ||||||| ||| || | | |||||||  ||||||||||||||||||||||||  |||||||||||||| || || | ||||||    
T  32762982 cgttcttcacaaaagactgtaatttcagtttgcatatctgagagctagccaatatatcataactatactcagactcagaagagttaggaccgaggcagca 32762883  T
Q  219 aatgttgaccgcgtttcccaaaag 242  Q
    ||| ||||| || ||||| |||||    
T  32762882 aatattgactgcatttcctaaaag 32762859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 28474937 - 28474719
Alignment:
Q  19 gggggttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttgga 118  Q
    ||||||||| ||||| |||| |||||||||||| |     ||||||||||||||||||| || |||||||||| | ||||| |||| | ||||  |||||    
T  28474937 gggggttatacaaatatctagcttgagaggttcgg-----aagaaccaaatggaatcacaagcaactctgatgaaggagttgctaaagcaacctcttgga 28474843  T
Q  119 cattcttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagca 218  Q
    | |||||| ||||||| |||||   ||| || | | |||||||| ||||||||||||||||||||||||  |||||||||||||| || |||||||||||    
T  28474842 cgttcttcacaaaagactgtaaagtcagtttgcatatctgagacctagccaatatatcataactatactcggactcagaagagttaggaccaatgcagca 28474743  T
Q  219 aatgttgaccgcgtttcccaaaag 242  Q
    ||| |||||  | |||||||||||    
T  28474742 aatattgactccatttcccaaaag 28474719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 238
Target Start/End: Original strand, 32651863 - 32652048
Alignment:
Q  53 gttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacattcttcgcaaaagagtgtaattccagcttact 152  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| || || | ||||| ||||||| || |||  ||||||| ||||||| ||| || |     
T  32651863 gttcagaagaaccaaatggaatcacaaggaactctgatgaaagatttgctgaagtaacacgttggaaatccttaccaaaagactgtaatttcagtttgca 32651962  T
Q  153 tgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaatgttgaccgcgtttccca 238  Q
      ||| |||| |||||||||||||||||||||| |  |||||  || ||||||| ||||||| |||||| ||||| || |||||||    
T  32651963 catctcagacctagccaatatatcataactatattcagactcgtaaaagtttggaccaatgccgcaaatattgactgcatttccca 32652048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 32858297 - 32858129
Alignment:
Q  53 gttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacattcttcgcaaaagagtgtaattccagcttact 152  Q
    ||||| ||||||||||||||||||| ||| ||||||||| ||||||| |||| |||| ||||||||| |  ||| ||||||| ||||||| ||  || |     
T  32858297 gttcaaaagaaccaaatggaatcacaaggcactctgatgaaagagttgctaaagtaaaccgttggacgtatttcacaaaagactgtaatttcaatttgca 32858198  T
Q  153 tgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaat 221  Q
    | |||||||| ||||| |||||||| |||||||||| || ||| ||||||| || |||||||| |||||    
T  32858197 tatctgagacctagccgatatatcagaactatacttggattcacaagagttaggaccaatgcaacaaat 32858129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 32656093 - 32656308
Alignment:
Q  23 gttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacatt 122  Q
    |||||||||||||||| |||||||| ||||      ||||||||||||||||||| || ||||| || | ||||||| |||||  ||||  |||||||||    
T  32656093 gttatgcaaatttctagcttgagagcttcaa-----aagaaccaaatggaatcacaagcaactccgacgaaagagttgctaatacaaccgattggacatt 32656187  T
Q  123 cttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaatg 222  Q
    |||||| ||||| ||||||| ||  || |   |||||||| || |||||||||| |||||| | |  |||||  |||||||||| ||||| ||||||||     
T  32656188 cttcgcgaaagactgtaatttcaagttgcacatctgagacctaaccaatatatcgtaactacattcagactcgaaagagtttggaccaatacagcaaata 32656287  T
Q  223 ttgaccgcgtttcccaaaagc 243  Q
    ||||  || ||||||||||||    
T  32656288 ttgatagcatttcccaaaagc 32656308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 32662009 - 32662194
Alignment:
Q  57 agaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacattcttcgcaaaagagtgtaattccagcttacttgtc 156  Q
    ||||||||||||||||||||  ||||||||||| | | ||||| | || | ||| ||||| |||| ||| |||||||| || |||| ||| || |   ||    
T  32662009 agaagaaccaaatggaatcaaaaggaactctgaggaaggagttgcgaacgcaacacgttgaacatcctttgcaaaagactgcaatttcagtttgcacatc 32662108  T
Q  157 tgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaatgttgaccgcgtttcccaaaag 242  Q
    |||||| |||||||||||| ||| ||||| |  |||||  |||||||||| ||||| |||||||| ||||  || |||||||||||    
T  32662109 tgagacctagccaatatataatatctatattcagactcgaaagagtttggaccaatacagcaaatattgatagcatttcccaaaag 32662194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 25477535 - 25477494
Alignment:
Q  19 gggggttatgcaaatttctatcttgagaggttcagttcagaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25477535 gggggttatgcaaatttctatcttgagaggttcagttcagaa 25477494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 32710227 - 32710150
Alignment:
Q  63 accaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacattcttcgcaaaagagtgtaa 140  Q
    ||||||||||||||||||||||  ||||| ||||  | ||||  |||| |||||||||||||||| |||||| |||||    
T  32710227 accaaatggaatcacgaggaacgttgatgaaagatctgctaaactaacgcgttggacattcttcggaaaagactgtaa 32710150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 17583577 - 17583355
Alignment:
Q  19 gggggttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttgga 118  Q
    ||||||||||||||| |||| ||||||||||||||     ||||||||||||||||||| || |||||||||| ||||||| |||| | |||| ||||||    
T  17583577 gggggttatgcaaatatctagcttgagaggttcag-----aagaaccaaatggaatcacaagcaactctgatgaaagagttgctaaaggaacctgttgga 17583483  T
Q  119 cattcttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagca 218  Q
    | |||||| | ||||| ||||||| ||| ||   | |||||||| |||||||||||||||||||||| |  |||||||||||||| || |||||||||||    
T  17583482 cgttcttcacgaaagactgtaatttcagtttggatatctgagacctagccaatatatcataactatagtcggactcagaagagttaggaccaatgcagca 17583383  T
Q  219 aatgttgaccgcgtttcccaaaagcata 246  Q
    ||  ||||| || |||||||||||||||    
T  17583382 aagattgactgcatttcccaaaagcata 17583355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 21 - 248
Target Start/End: Complemental strand, 17591482 - 17591260
Alignment:
Q  21 gggttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggaca 120  Q
    ||||||||||||| |||| ||||||||||||||     ||||||||||||||||||| || |||||||||| ||||||| |||| |||||  |||||||     
T  17591482 gggttatgcaaatatctagcttgagaggttcag-----aagaaccaaatggaatcacaagcaactctgatgaaagagttgctaaagtaacttgttggacg 17591388  T
Q  121 ttcttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaa 220  Q
    |||||||||||||| ||||||| |||  | |   |||||||| ||||||||||||||||| |||| || |||||||||||||| || |||||||||||||    
T  17591387 ttcttcgcaaaagactgtaatttcagtatgcaattctgagacctagccaatatatcataattatagttggactcagaagagttaggaccaatgcagcaaa 17591288  T
Q  221 tgttgaccgcgtttcccaaaagcatagt 248  Q
      ||||| || |||||||||||| ||||    
T  17591287 gattgactgcatttcccaaaagcgtagt 17591260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 249
Target Start/End: Complemental strand, 16757034 - 16756838
Alignment:
Q  53 gttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacattcttcgcaaaagagtgtaattccagcttact 152  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||||| |||| |||||  | || | |||||| ||||| |||||||||| ||| || |     
T  16757034 gttcagaagaaccaattggaatcacaaggaactctgatgaaagagttgctaaagtaacttgatgcaaattctttgcaaacgagtgtaatttcagtttgca 16756935  T
Q  153 tgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaatgttgaccgcgtttcccaaaagcatagta 249  Q
    | |||||||| ||||| ||||||||||||||||||  ||| ||||||   |||| |||| ||| ||||| ||||| || ||||||||||||||||||    
T  16756934 tttctgagacctagccgatatatcataactatactcggacacagaagcagttggaccaaagcaacaaatattgactgcatttcccaaaagcatagta 16756838  T

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Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 248
Target Start/End: Complemental strand, 16752554 - 16752334
Alignment:
Q  23 gttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttggacatt 122  Q
    |||||||||||||||| |||||||||||  |     ||||||||  ||||||||  |||||||||| || ||||||| |||| |||||| ||||||||||    
T  16752554 gttatgcaaatttctagcttgagaggtttgg-----aagaaccatttggaatcataaggaactctggtgaaagagttcctaaagtaacctgttggacatt 16752460  T
Q  123 cttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagcaaatg 222  Q
    | |  ||||||||||||||| ||| || | | |||||||| | |||   ||| ||||||||||||  ||||| ||||  ||||| |||| |||||||||     
T  16752459 cgttacaaaagagtgtaatttcagtttgcatctctgagacctggccttgataccataactatactcggactcggaagcatttggaccaaagcagcaaata 16752360  T
Q  223 ttgaccgcgtttcccaaaagcatagt 248  Q
    ||||| || || ||||||||| ||||    
T  16752359 ttgactgcattccccaaaagcgtagt 16752334  T

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Target: chr4 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 21524630 - 21524430
Alignment:
Q  19 gggggttatgcaaatttctatcttgagaggttcagttcagaagaaccaaatggaatcacgaggaactctgatggaagagtttctaatgtaacccgttgga 118  Q
    ||||||||||||||| |||| |||  |||||   ||||| ||||||||||||||||||| ||| ||||| ||| |||||||  ||| |||| ||||| ||    
T  21524630 gggggttatgcaaatatctagcttatgaggtg--gttcaaaagaaccaaatggaatcacaaggcactctcatgaaagagttaataaagtaaaccgttaga 21524533  T
Q  119 cattcttcgcaaaagagtgtaattccagcttacttgtctgagacttagccaatatatcataactatactttgactcagaagagtttggtccaatgcagca 218  Q
      |  ||| ||||||| ||||||| ||  || | | ||| |||| ||||||||||||||||||||||||| |||||| |||||||  | |||||||| ||    
T  21524532 agtatttcacaaaagactgtaatttcaatttgcatatctcagacctagccaatatatcataactatacttggactcaaaagagttatgaccaatgcaaca 21524433  T
Q  219 aat 221  Q
    |||    
T  21524432 aat 21524430  T

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