View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1607-INSERTION-1 (Length: 775)
Name: NF1607-INSERTION-1
Description: NF1607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1607-INSERTION-1 |
 |  |
|
| [»] chr5 (18 HSPs) |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 756; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 756; E-Value: 0
Query Start/End: Original strand, 8 - 775
Target Start/End: Original strand, 31464391 - 31465158
Alignment:
| Q |
8 |
attcagacccttccaataatccaatcaatgagttttctaaccatcgtcttcctgttctcgttacttggattggtttggtagaaatgtctaattggatctt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31464391 |
attcagacccttccaataatccaatcaatgagttttctaaccatcgtcttcctgttctcgttacttggattggtttggtagaaatgtctaattggatctt |
31464490 |
T |
 |
| Q |
108 |
ccacaacacttggtgctgccgtattatttgggatgaaatgcagaattggatcactttctgcgccgttttgattgcctatagaaggttgatcttggattgg |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31464491 |
ccacaacacttggtgctgccgtattatttgggatgaaatgcagaattggatcactttctgcgccgttttgattgcctatagaaggttgatcttggattgg |
31464590 |
T |
 |
| Q |
208 |
gagtccactttcacccaagtaaacacgaaacatgatgagagaataagcaaaacacgctccaacaacagctaaaacttttttaattttcatcagttgtaaa |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31464591 |
gagtccactttcacccaagtaaacacgaaacatgatgagagaataagcaaaacacgctccaacaacagctaaaacttttttaattttcatcagttgtaaa |
31464690 |
T |
 |
| Q |
308 |
gtgaaatatccacagaaaaaataaaggagatcaacctcaaatcccaagtgagtttgctttgacatacaaagcgacatgacagcaaaagcagcagacgata |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31464691 |
gtgaaatatccacagaaaaaataaaggagatcaacctcaaatcccaagtgagtttgctttgacatacatagcgacatgacagcaaaagcagcagacgata |
31464790 |
T |
 |
| Q |
408 |
taaggctatatgcatctggttttgcgttagctttatcaaagaaaaatgagtaaatagtagtgattgtgaaaactgaaactgccaaatgagctctgaacct |
507 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31464791 |
taaggctatatgcatctggttttgcattagctttatcaaagaaaaatgagtaaatagtagtgattgtgaaaactgaaactgccaaatgagctctgaacct |
31464890 |
T |
 |
| Q |
508 |
gagacttggcgatttttgccatgtgattgcatttgctaacaagtccgcaaggcagataacgaaactgaacagacagtacagagataccttcaataaattc |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31464891 |
gagacttggcgatttttgccatgtgattgcatttgctaacaagtccgcaaggcagataacgaaactgaacagacagtacagagataccttcaataaattc |
31464990 |
T |
 |
| Q |
608 |
cactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaacaatggatgaaacaaaacacagatatctccatttctttacctgca |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31464991 |
cactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaacaatggatgaaacaaaacacagatatctccatttctttacctgca |
31465090 |
T |
 |
| Q |
708 |
tcttcctattcaacattttgttgaccttcgacgtcatgttgtttctcaagcgagtaatatttgctttc |
775 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
31465091 |
tcttcctattcaacattttgttgaccttcgacgtcatgttgtttctcaagcgagtaatgtttgctttc |
31465158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 8 - 775
Target Start/End: Complemental strand, 31484340 - 31483573
Alignment:
| Q |
8 |
attcagacccttccaataatccaatcaatgagttttctaaccatcgtcttcct---gttctcgttacttggattggtttggtagaaatgtctaattggat |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31484340 |
attcagacccttccaataatccaatcaatgatttttctaaccatcgtcttcttcttgttctcgttactaggattggtttggtagaaatgtctaattggat |
31484241 |
T |
 |
| Q |
105 |
cttccacaacacttggtgctgccgtattatttgggatgaaatgcagaattggatcactttctgcgccgttttgattgcctatagaaggttgatcttggat |
204 |
Q |
| |
|
|||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31484240 |
cttcttcaacacttgatgccgcggtattatttgggatgaaatgcagaattggatcactttctgcgccgttttgattgcctatggaaggttgatcttggat |
31484141 |
T |
 |
| Q |
205 |
tgggagtccactttcacccaagtaaacacgaaacatgatgagagaataagcaaaacacgctccaacaacagctaaaacttttttaattttcatcagttgt |
304 |
Q |
| |
|
||||||||| ||||||||| ||||| |||||||||||||||| ||||| |||| ||| ||||||||| |||||| |||||||||||| ||| || |
|
|
| T |
31484140 |
tgggagtccgctttcacccgggtaaaaacgaaacatgatgagaaaataactgaaactcgcaccaacaacaactaaaaacaatttaattttcattagtagt |
31484041 |
T |
 |
| Q |
305 |
aaagtgaaatatccacagaaaaaataaaggagatcaacctcaaatcccaagtgagtttgctttgacatacaaagcgacatgacagcaaaagcagcagacg |
404 |
Q |
| |
|
|||||||||||| |||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
31484040 |
aaagtgaaatatgcacaaaaaaaatataggagatcaacctcaaatcccaggtgagtttgctttgacatacaaagcgacatgacagcaaaagcagcaagcg |
31483941 |
T |
 |
| Q |
405 |
atataaggctatatgcatctggttttgcgttagc---tttatcaaagaaaaatgagtaaatagtagtgattgtgaaaactgaaactgccaaatgagctct |
501 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| | ||||||||||| | | ||||||||||| ||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
31483940 |
atatcaggctatatgcatccggttttgcgttatcttttttatcaaagatataggagtaaatagttgtgattgtgaaaactaaaaatgccaaatgagctct |
31483841 |
T |
 |
| Q |
502 |
gaacctgagacttggcgatttttgccatgtgattgcatttgctaacaagtccgcaaggcagataacgaaactgaacagacagtacagagataccttcaat |
601 |
Q |
| |
|
|||||| ||||||||||| |||||||| || ||||| | ||| ||||| | |||||||| ||||||||| | | ||| ||| || |||||| |
|
|
| T |
31483840 |
gaacctaagacttggcgacgtttgccatatg------tttgcaatcaaatccgcgatgcagataatgaaactgaaaacagtgtaaagaattatcttcaac |
31483747 |
T |
 |
| Q |
602 |
aaattccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaacaatggatgaaacaaaacacagatatctccatttcttta |
701 |
Q |
| |
|
||| ||||||||||| ||| |||||||||||||| ||||||||||||| | || ||||||| |||||||||||||||||||| | |||||||| || ||| |
|
|
| T |
31483746 |
aaactccactttccacatatatgattgaaggaagagcttagagcgtaaaagagtagtccaataatggatgaaacaaaacacacaaatctccatatcatta |
31483647 |
T |
 |
| Q |
702 |
cctgcatcttcctattcaacattttgttgaccttcgacgtcatgttgtttctcaagcgagtaatatttgctttc |
775 |
Q |
| |
|
||||||||||||| ||||||||| ||||| ||| || |||| ||||||||||||||||| ||| ||||||||| |
|
|
| T |
31483646 |
gctgcatcttcctactcaacatttggttgagcttggaagtcacgttgtttctcaagcgagcaatgtttgctttc |
31483573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 232 - 694
Target Start/End: Original strand, 31387455 - 31387914
Alignment:
| Q |
232 |
acgaaacatgatgagagaataagcaaaacacgctccaacaacagctaaaacttttttaattttcatcagttgtaaagtgaaatatccacagaaaaaataa |
331 |
Q |
| |
|
|||||| |||||||| |||||| |||| ||||||||||| |||||||| ||| || ||||||||||||||||| |||||||| || |||||||| |
|
|
| T |
31387455 |
acgaaaaatgatgagggaataactgaaactcgctccaacaattactaaaactaattttatcttcatcagttgtaaagttaaatatccgcaaaaaaaatat |
31387554 |
T |
 |
| Q |
332 |
aggagatcaacctcaaatcccaagtgagtttgctttgacatacaaagcgacatgacagcaaaagcagcagacgatataaggctatatgcatctggttttg |
431 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||||| || || ||||||| |||||||||||| | || || || || || |||||||||| |
|
|
| T |
31387555 |
aggagatcaacttcgaatccgaagtgagtttgctttgacaaactgagagacatgatggcaaaagcagcacaggaaatcagactgtacaaatctggttttc |
31387654 |
T |
 |
| Q |
432 |
cgttagctttatcaaagaaaaatgagtaaatagtagtgattgtgaaaactgaaactgccaaatgagctctgaacctgagacttg---gcgatttttgcca |
528 |
Q |
| |
|
|||||||||||||||| || || ||||||| ||| |||||| ||||||| |||| ||||||||||| | | ||||| | ||| |||||||| |
|
|
| T |
31387655 |
cgttagctttatcaaaaaagaaggagtaaacagtggtgattatgaaaaccgaaaacaccaaatgagctttaagtggaagactagtgttcgagttttgcca |
31387754 |
T |
 |
| Q |
529 |
tgtgattgcatttgctaacaagtccgcaaggcagataacgaaactgaacagacagtacagagataccttcaataaattccactttccaaatagatgattg |
628 |
Q |
| |
|
| || ||||| |||||| | |||||||||||||||||||| | | || ||| ||||||| || || ||||| || |||||||||||| || |
|
|
| T |
31387755 |
tttg------tttgcaaacaagatggtgaggcagataacgaaactgaaaatgctataaagaaataccttaaaaaagttccagttcccaaatagatgagtg |
31387848 |
T |
 |
| Q |
629 |
aaggaagggcttagagcgtaacatagcagtccaacaatggatgaaacaaaacacagatatctccat |
694 |
Q |
| |
|
||||||| ||| ||||| ||||| ||||||||||||| |||||||||||| ||| | |||||||| |
|
|
| T |
31387849 |
aaggaagagctaagagcataacaaagcagtccaacaacagatgaaacaaaagacacaaatctccat |
31387914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 232 - 480
Target Start/End: Original strand, 31460019 - 31460267
Alignment:
| Q |
232 |
acgaaacatgatgagagaataagcaaaacacgctccaacaacagctaaaacttttttaattttcatcagttgtaaagtgaaatatccacagaaaaaataa |
331 |
Q |
| |
|
|||||| |||||||| |||||| |||| ||||||||||| ||||||| ||| || ||||||||||||||||| |||||||| || ||||| || |
|
|
| T |
31460019 |
acgaaaaatgatgagggaataactgaaactcgctccaacaattactaaaaccaattttatcttcatcagttgtaaagttaaatatccgcaaaaaaagtat |
31460118 |
T |
 |
| Q |
332 |
aggagatcaacctcaaatcccaagtgagtttgctttgacatacaaagcgacatgacagcaaaagcagcagacgatataaggctatatgcatctggttttg |
431 |
Q |
| |
|
||||||||||| || ||||| ||||||||||||||||||| || || |||||||| |||||||||||| || || || || || |||||||||| |
|
|
| T |
31460119 |
aggagatcaacttcgaatccgaagtgagtttgctttgacaaactgagagacatgacggcaaaagcagcaccggaaattagactgtacaaatctggttttc |
31460218 |
T |
 |
| Q |
432 |
cgttagctttatcaaagaaaaatgagtaaatagtagtgattgtgaaaac |
480 |
Q |
| |
|
|||||||||||||||| || || ||||||| ||| |||||| ||||||| |
|
|
| T |
31460219 |
cgttagctttatcaaaaaagaaggagtaaacagtggtgattatgaaaac |
31460267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 420 - 651
Target Start/End: Original strand, 31390675 - 31390900
Alignment:
| Q |
420 |
catctggttttgcgttagctttatcaaagaaaaatgagtaaatagtagtgattgtgaaaactgaaactgccaaatgagctctgaacctgagacttggcga |
519 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||||| || || |||||||||| || | | ||||||||||||| | |||||||||||| || |
|
|
| T |
31390675 |
catctggttttccgttagctttatcaaagaaaaaggagtaaactgttgttattgtgaaaatagagaataccaaatgagctctaagcctgagacttggtga |
31390774 |
T |
 |
| Q |
520 |
tttttgccatgtgattgcatttgctaacaagtccgcaaggcagataacgaaactgaacagacagtacagagataccttcaataaattccactttccaaat |
619 |
Q |
| |
|
||||||||| || ||||| || ||| |||||||| |||| ||||||||| | | ||||||| | | ||| || || ||||| ||||||||| |
|
|
| T |
31390775 |
gttttgccatttg------tttgcaaaaaagatggcaaggcaaataatgaaactgaaaacagtgtacagaaaaatctttaacaagttccagtttccaaat |
31390868 |
T |
 |
| Q |
620 |
agatgattgaaggaagggcttagagcgtaaca |
651 |
Q |
| |
|
||||| |||||||||| |||||||| ||||| |
|
|
| T |
31390869 |
agatggttgaaggaagaacttagagcataaca |
31390900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 592 - 693
Target Start/End: Original strand, 31460376 - 31460478
Alignment:
| Q |
592 |
taccttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagt-ccaacaatggatgaaacaaaacacagatatct |
690 |
Q |
| |
|
|||||| || || ||||| || |||||||||||||||||||||| ||| ||||| ||||| |||||| ||||||| ||||||||||||||||| | |||| |
|
|
| T |
31460376 |
taccttaaaaaagttccagttcccaaatagatgattgaaggaagagctaagagcataacaaagcagtgccaacaacggatgaaacaaaacacacacatct |
31460475 |
T |
 |
| Q |
691 |
cca |
693 |
Q |
| |
|
||| |
|
|
| T |
31460476 |
cca |
31460478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 286 - 394
Target Start/End: Original strand, 31384129 - 31384237
Alignment:
| Q |
286 |
tttaattttcatcagttgtaaagtgaaatatccacagaaaaaataaaggagatcaacctcaaatcccaagtgagtttgctttgacatacaaagcgacatg |
385 |
Q |
| |
|
|||||| ||||| || |||||||| ||| |||| ||||||||||| | |||||||||||||||| | ||||||||||| ||||||| || ||| ||||| |
|
|
| T |
31384129 |
tttaatcttcatgagctgtaaagttaaacatccgcagaaaaaatataagagatcaacctcaaattcgaagtgagtttgttttgacaaaccaagatacatg |
31384228 |
T |
 |
| Q |
386 |
acagcaaaa |
394 |
Q |
| |
|
| ||||||| |
|
|
| T |
31384229 |
atagcaaaa |
31384237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 664
Target Start/End: Original strand, 31407401 - 31407497
Alignment:
| Q |
568 |
gaaactgaacagacagtacagagataccttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaaca |
664 |
Q |
| |
|
||||||||| ||| ||| ||| ||| |||||| |||||||| |||||||||||||| |||||||||| ||| ||||| ||||| |||| ||||||| |
|
|
| T |
31407401 |
gaaactgaaaagagtgtaaagaaatatcttcaacaaattccaatttccaaatagatggttgaaggaagtgctgagagcataacagagcaatccaaca |
31407497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 592 - 664
Target Start/End: Original strand, 31416558 - 31416630
Alignment:
| Q |
592 |
taccttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaaca |
664 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| ||||| |||| ||||||||| ||||| | |||||||||| |
|
|
| T |
31416558 |
taccttcaacaaattccaatttccaaatagatggttgaaagaagagcttagagcataacaaatcagtccaaca |
31416630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 592 - 662
Target Start/End: Original strand, 31494135 - 31494205
Alignment:
| Q |
592 |
taccttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaa |
662 |
Q |
| |
|
||||||||| |||||||| |||||||||||||| ||||| |||| ||||||||| ||||| |||| ||||| |
|
|
| T |
31494135 |
taccttcaacaaattccaatttccaaatagatggttgaacgaagagcttagagcataacaaagcaatccaa |
31494205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 595 - 664
Target Start/End: Original strand, 31475956 - 31476025
Alignment:
| Q |
595 |
cttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaaca |
664 |
Q |
| |
|
|||||| |||||||| ||||||||||||| || ||||||| ||||||||| ||||| |||||||||||| |
|
|
| T |
31475956 |
cttcaacaaattccagtttccaaatagatagttaaaggaagagcttagagcataacaaagcagtccaaca |
31476025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 595 - 664
Target Start/End: Original strand, 40843338 - 40843407
Alignment:
| Q |
595 |
cttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaaca |
664 |
Q |
| |
|
|||||| |||||||| ||||||||||||| |||||||||| ||||||||| ||||| | |||||||||| |
|
|
| T |
40843338 |
cttcaacaaattccaatttccaaatagatagttgaaggaagagcttagagcataacaaaccagtccaaca |
40843407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 681
Target Start/End: Original strand, 31384407 - 31384483
Alignment:
| Q |
605 |
ttccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaacaatggatgaaacaaaaca |
681 |
Q |
| |
|
||||| || |||||||||||||||||||||| ||| ||||| ||| | | ||| |||||||| |||||||||||||| |
|
|
| T |
31384407 |
ttccatttcccaaatagatgattgaaggaagagctaagagcataataaaacagaccaacaattgatgaaacaaaaca |
31384483 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 429
Target Start/End: Complemental strand, 31317704 - 31317597
Alignment:
| Q |
322 |
gaaaaaataaaggagatcaacctcaaatcccaagtgagtttgctttgacatacaaagcgacatgacagcaaaagcagcagacgatataaggctatatgca |
421 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| | ||||||||| |||||| || ||| ||||| | |||||| |||||| | || || | ||||||||| |
|
|
| T |
31317704 |
gaaaaaataaagaagatcaatttcaaatccccactgagtttgccttgacaaactaagtgacataatagcaaaggcagcacatgaaattaaactatatgca |
31317605 |
T |
 |
| Q |
422 |
tctggttt |
429 |
Q |
| |
|
|||||||| |
|
|
| T |
31317604 |
tctggttt |
31317597 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 665
Target Start/End: Complemental strand, 31395824 - 31395765
Alignment:
| Q |
606 |
tccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaacaa |
665 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| ||||| ||||| | |||||||||| |
|
|
| T |
31395824 |
tccagtttccaaatagatgattgaaggaagagctgagagcataacaaacaagtccaacaa |
31395765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 678
Target Start/End: Original strand, 31643895 - 31643978
Alignment:
| Q |
595 |
cttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaacatagcagtccaacaatggatgaaacaaa |
678 |
Q |
| |
|
|||||| | |||||| | ||||||||||| |||||||||| ||| ||||| ||||| || ||||||||||| |||||| |||| |
|
|
| T |
31643895 |
cttcaacagattccaatctccaaatagatagttgaaggaagagctaagagcataacaaagtagtccaacaatagatgaagcaaa |
31643978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 595 - 653
Target Start/End: Original strand, 31463034 - 31463092
Alignment:
| Q |
595 |
cttcaataaattccactttccaaatagatgattgaaggaagggcttagagcgtaacata |
653 |
Q |
| |
|
|||||| || ||||| |||||||||||||| |||||||||| ||||| ||| ||||||| |
|
|
| T |
31463034 |
cttcaacaagttccaatttccaaatagatggttgaaggaagagcttacagcataacata |
31463092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 31462866 - 31462907
Alignment:
| Q |
420 |
catctggttttgcgttagctttatcaaagaaaaatgagtaaa |
461 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
31462866 |
catctggttttccgttatctttatcaaagaaaaacgagtaaa |
31462907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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