View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1607-INSERTION-9 (Length: 655)

Name: NF1607-INSERTION-9
Description: NF1607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1607-INSERTION-9
NF1607-INSERTION-9
[»] chr7 (53 HSPs)
chr7 (65-655)||(969443-970030)
chr7 (455-639)||(3394374-3394555)
chr7 (517-625)||(24069420-24069528)
chr7 (520-625)||(26623816-26623918)
chr7 (546-625)||(32521921-32522000)
chr7 (518-639)||(38880590-38880711)
chr7 (551-655)||(1448796-1448898)
chr7 (551-624)||(35667227-35667300)
chr7 (543-639)||(41553446-41553542)
chr7 (543-639)||(41553791-41553887)
chr7 (544-639)||(3224422-3224517)
chr7 (543-639)||(28476206-28476306)
chr7 (551-624)||(14627874-14627947)
chr7 (551-624)||(20116591-20116664)
chr7 (551-624)||(23786584-23786657)
chr7 (541-624)||(37837485-37837565)
chr7 (541-624)||(39328817-39328897)
chr7 (541-624)||(42978594-42978674)
chr7 (551-624)||(46339063-46339136)
chr7 (538-624)||(9450164-9450247)
chr7 (543-639)||(41554136-41554232)
chr7 (552-635)||(2407157-2407240)
chr7 (538-625)||(6002017-6002104)
chr7 (543-582)||(22742923-22742962)
chr7 (543-582)||(24350910-24350949)
chr7 (538-625)||(31235786-31235873)
chr7 (543-624)||(38798767-38798845)
chr7 (541-639)||(5775187-5775284)
chr7 (551-655)||(19560007-19560109)
chr7 (551-655)||(22927836-22927938)
chr7 (541-624)||(30756846-30756926)
chr7 (551-620)||(32684677-32684746)
chr7 (520-624)||(42311258-42311362)
chr7 (551-624)||(42408371-42408444)
chr7 (520-623)||(25068045-25068147)
chr7 (544-639)||(35665147-35665243)
chr7 (551-619)||(42067061-42067129)
chr7 (516-582)||(1100804-1100870)
chr7 (543-582)||(1749220-1749259)
chr7 (553-624)||(34773722-34773793)
chr7 (543-582)||(35132926-35132965)
chr7 (516-582)||(44311860-44311926)
chr7 (543-582)||(48930752-48930791)
chr7 (545-625)||(5348618-5348695)
chr7 (553-623)||(17611136-17611206)
chr7 (567-637)||(29617714-29617784)
chr7 (541-624)||(19296854-19296934)
chr7 (545-630)||(27997076-27997161)
chr7 (541-624)||(34899634-34899714)
chr7 (551-624)||(46822024-46822097)
chr7 (541-624)||(47590295-47590375)
chr7 (541-624)||(48316839-48316919)
chr7 (551-637)||(48061416-48061499)
[»] chr6 (39 HSPs)
chr6 (520-639)||(26588484-26588603)
chr6 (520-625)||(34185719-34185824)
chr6 (544-620)||(22571457-22571533)
chr6 (517-638)||(30493488-30493609)
chr6 (541-639)||(1933704-1933802)
chr6 (541-639)||(28981157-28981255)
chr6 (551-624)||(25064245-25064318)
chr6 (543-639)||(8102704-8102804)
chr6 (546-624)||(25337574-25337652)
chr6 (532-638)||(31296791-31296897)
chr6 (551-624)||(7881097-7881170)
chr6 (544-625)||(7976203-7976284)
chr6 (551-624)||(23947313-23947386)
chr6 (551-655)||(35001599-35001701)
chr6 (546-601)||(33543638-33543693)
chr6 (543-625)||(528376-528458)
chr6 (517-639)||(545982-546108)
chr6 (543-585)||(30776650-30776692)
chr6 (551-624)||(8496976-8497049)
chr6 (551-624)||(12652953-12653026)
chr6 (551-655)||(16419167-16419269)
chr6 (519-623)||(28635117-28635221)
chr6 (541-624)||(33053195-33053275)
chr6 (520-625)||(23128580-23128682)
chr6 (551-582)||(8028155-8028186)
chr6 (551-582)||(8196444-8196475)
chr6 (545-584)||(14801807-14801846)
chr6 (516-582)||(34489224-34489290)
chr6 (529-625)||(13546689-13546782)
chr6 (541-624)||(606187-606267)
chr6 (551-624)||(4984562-4984635)
chr6 (551-624)||(7876039-7876112)
chr6 (553-601)||(8266653-8266701)
chr6 (467-503)||(11321609-11321645)
chr6 (551-623)||(12165849-12165920)
chr6 (555-583)||(17334791-17334819)
chr6 (543-589)||(30608576-30608619)
chr6 (541-573)||(32327292-32327324)
chr6 (455-503)||(34018462-34018510)
[»] chr4 (68 HSPs)
chr4 (517-639)||(52944286-52944408)
chr4 (543-639)||(22300850-22300946)
chr4 (520-639)||(28857380-28857499)
chr4 (535-639)||(18048876-18048980)
chr4 (517-639)||(51888223-51888345)
chr4 (538-639)||(31359759-31359860)
chr4 (551-649)||(868183-868279)
chr4 (546-623)||(2624512-2624589)
chr4 (551-620)||(10389753-10389822)
chr4 (541-624)||(22611185-22611265)
chr4 (516-639)||(36204396-36204520)
chr4 (543-639)||(9643389-9643485)
chr4 (551-623)||(36161720-36161792)
chr4 (544-639)||(22038814-22038909)
chr4 (517-582)||(18935753-18935818)
chr4 (543-639)||(27651941-27652041)
chr4 (551-625)||(53616644-53616718)
chr4 (551-624)||(4643879-4643952)
chr4 (551-648)||(21090173-21090270)
chr4 (551-624)||(25273904-25273977)
chr4 (551-624)||(43444414-43444487)
chr4 (551-624)||(47417683-47417756)
chr4 (551-623)||(29965656-29965728)
chr4 (543-625)||(36194706-36194792)
chr4 (545-621)||(43853445-43853521)
chr4 (551-623)||(51318006-51318078)
chr4 (545-601)||(55227981-55228037)
chr4 (517-639)||(6155238-6155359)
chr4 (546-625)||(35261207-35261286)
chr4 (541-603)||(4142800-4142862)
chr4 (520-635)||(12199709-12199821)
chr4 (546-655)||(35964941-35965048)
chr4 (517-625)||(52933969-52934078)
chr4 (538-639)||(2069592-2069692)
chr4 (551-624)||(9528872-9528945)
chr4 (546-583)||(9645585-9645622)
chr4 (546-583)||(18138949-18138986)
chr4 (551-624)||(20569276-20569349)
chr4 (551-624)||(31381667-31381740)
chr4 (551-624)||(43154009-43154082)
chr4 (545-582)||(47320460-47320497)
chr4 (546-583)||(49126162-49126199)
chr4 (551-624)||(49410244-49410317)
chr4 (517-601)||(52204381-52204465)
chr4 (467-503)||(14121787-14121823)
chr4 (571-649)||(7008977-7009053)
chr4 (551-582)||(8009398-8009429)
chr4 (411-489)||(9643259-9643335)
chr4 (557-624)||(50766507-50766574)
chr4 (543-624)||(53444122-53444200)
chr4 (546-623)||(3336152-3336230)
chr4 (545-616)||(9145917-9145992)
chr4 (544-624)||(32766519-32766596)
chr4 (536-624)||(53811025-53811110)
chr4 (551-601)||(56194622-56194672)
chr4 (551-624)||(9283932-9284005)
chr4 (541-624)||(17949351-17949431)
chr4 (541-624)||(17953203-17953283)
chr4 (541-624)||(19853539-19853619)
chr4 (467-503)||(4937764-4937800)
chr4 (551-623)||(9048673-9048745)
chr4 (455-503)||(9146037-9146085)
chr4 (453-489)||(9634593-9634629)
chr4 (467-503)||(33920984-33921020)
chr4 (541-573)||(35348309-35348341)
chr4 (541-625)||(35395696-35395780)
chr4 (541-601)||(37683889-37683949)
chr4 (455-503)||(47158148-47158196)
[»] chr3 (57 HSPs)
chr3 (517-639)||(12947286-12947408)
chr3 (517-639)||(29239297-29239419)
chr3 (535-639)||(4396346-4396450)
chr3 (546-624)||(36734687-36734765)
chr3 (467-625)||(53508133-53508288)
chr3 (551-639)||(4821796-4821883)
chr3 (545-639)||(35175386-35175480)
chr3 (545-639)||(53807870-53807963)
chr3 (551-624)||(42719523-42719596)
chr3 (543-639)||(21289826-21289926)
chr3 (551-601)||(49552242-49552292)
chr3 (541-624)||(9998448-9998528)
chr3 (551-620)||(21488097-21488166)
chr3 (532-625)||(22803009-22803102)
chr3 (517-630)||(27706247-27706364)
chr3 (517-625)||(29922011-29922119)
chr3 (517-625)||(29971164-29971272)
chr3 (551-624)||(35499193-35499266)
chr3 (551-624)||(46934648-46934721)
chr3 (541-624)||(40487306-40487387)
chr3 (517-638)||(51923677-51923802)
chr3 (543-582)||(7546590-7546629)
chr3 (518-584)||(25461068-25461134)
chr3 (517-639)||(41818166-41818287)
chr3 (538-603)||(43488638-43488700)
chr3 (543-582)||(51487086-51487125)
chr3 (517-582)||(16235376-16235441)
chr3 (551-601)||(29503468-29503518)
chr3 (546-624)||(31794072-31794150)
chr3 (541-624)||(10108217-10108297)
chr3 (541-624)||(10233051-10233131)
chr3 (551-624)||(12116104-12116177)
chr3 (551-624)||(25162442-25162515)
chr3 (541-624)||(36461458-36461538)
chr3 (541-635)||(20608915-20609006)
chr3 (519-638)||(29249189-29249308)
chr3 (551-623)||(32607475-32607547)
chr3 (542-582)||(42460725-42460765)
chr3 (538-624)||(52923144-52923227)
chr3 (545-584)||(8914690-8914729)
chr3 (551-624)||(9797561-9797631)
chr3 (551-582)||(36906128-36906159)
chr3 (464-503)||(52116151-52116190)
chr3 (570-639)||(628935-629003)
chr3 (541-624)||(6954723-6954803)
chr3 (541-624)||(10229457-10229537)
chr3 (541-624)||(21533836-21533916)
chr3 (546-623)||(26739385-26739462)
chr3 (551-655)||(30648685-30648787)
chr3 (541-624)||(35864959-35865039)
chr3 (562-639)||(44805029-44805106)
chr3 (551-620)||(46322356-46322425)
chr3 (551-639)||(32246435-32246523)
chr3 (542-624)||(33579862-33579941)
chr3 (555-599)||(37169241-37169285)
chr3 (541-573)||(40556693-40556725)
chr3 (455-503)||(47042192-47042240)
[»] chr1 (47 HSPs)
chr1 (517-639)||(47132861-47132983)
chr1 (541-639)||(12635152-12635250)
chr1 (545-639)||(44543259-44543352)
chr1 (545-639)||(49626900-49626993)
chr1 (545-639)||(24582937-24583030)
chr1 (551-637)||(31692481-31692566)
chr1 (520-640)||(41994388-41994508)
chr1 (545-639)||(34528716-34528810)
chr1 (551-624)||(35584613-35584686)
chr1 (551-624)||(39987402-39987475)
chr1 (538-639)||(40163509-40163610)
chr1 (517-587)||(32679159-32679229)
chr1 (545-639)||(19060896-19060989)
chr1 (546-624)||(39927549-39927627)
chr1 (551-616)||(9341719-9341784)
chr1 (541-623)||(21686858-21686937)
chr1 (520-625)||(44915603-44915705)
chr1 (543-582)||(16161818-16161857)
chr1 (553-639)||(6217839-6217925)
chr1 (572-654)||(15492313-15492394)
chr1 (529-639)||(16262831-16262941)
chr1 (551-620)||(5701272-5701341)
chr1 (551-655)||(9172503-9172605)
chr1 (551-655)||(9180485-9180587)
chr1 (551-624)||(9687199-9687272)
chr1 (551-624)||(19715890-19715963)
chr1 (551-624)||(28035152-28035225)
chr1 (551-624)||(30879089-30879161)
chr1 (545-582)||(34413163-34413200)
chr1 (551-624)||(34519145-34519218)
chr1 (541-624)||(34878305-34878385)
chr1 (551-655)||(51868611-51868713)
chr1 (551-623)||(33291414-33291486)
chr1 (520-624)||(7337690-7337791)
chr1 (551-582)||(7997802-7997833)
chr1 (551-582)||(40881049-40881080)
chr1 (551-582)||(45426103-45426134)
chr1 (543-582)||(48750165-48750204)
chr1 (551-601)||(3871421-3871471)
chr1 (551-601)||(51871876-51871926)
chr1 (551-624)||(799813-799886)
chr1 (541-624)||(5983821-5983901)
chr1 (450-503)||(15492189-15492242)
chr1 (551-620)||(31836820-31836889)
chr1 (536-625)||(44637419-44637508)
chr1 (551-620)||(50272139-50272208)
chr1 (551-583)||(19723346-19723378)
[»] chr8 (45 HSPs)
chr8 (544-639)||(5333413-5333508)
chr8 (544-639)||(29617284-29617379)
chr8 (545-639)||(1236707-1236800)
chr8 (545-639)||(1239407-1239500)
chr8 (544-639)||(8443521-8443616)
chr8 (545-639)||(3240365-3240459)
chr8 (455-638)||(24099266-24099449)
chr8 (545-639)||(15344294-15344387)
chr8 (545-639)||(15433359-15433452)
chr8 (545-639)||(15524663-15524756)
chr8 (551-625)||(44099928-44100002)
chr8 (551-624)||(4808980-4809053)
chr8 (551-624)||(35580473-35580546)
chr8 (551-619)||(11196905-11196973)
chr8 (538-624)||(36532900-36532986)
chr8 (551-624)||(9619352-9619425)
chr8 (532-625)||(28239830-28239923)
chr8 (551-624)||(43192341-43192414)
chr8 (551-623)||(34611820-34611892)
chr8 (543-639)||(18890709-18890809)
chr8 (541-639)||(34609814-34609911)
chr8 (551-624)||(2655886-2655959)
chr8 (541-624)||(7883266-7883346)
chr8 (551-624)||(11464187-11464260)
chr8 (542-625)||(25191091-25191171)
chr8 (551-620)||(42448026-42448095)
chr8 (554-622)||(21237784-21237852)
chr8 (564-639)||(8981167-8981242)
chr8 (551-624)||(17693639-17693709)
chr8 (516-582)||(20227347-20227413)
chr8 (551-582)||(32724518-32724549)
chr8 (551-582)||(39657441-39657472)
chr8 (520-624)||(40211327-40211428)
chr8 (543-582)||(41896496-41896535)
chr8 (553-583)||(15889574-15889604)
chr8 (551-581)||(19876227-19876257)
chr8 (571-637)||(39450552-39450618)
chr8 (541-624)||(10377673-10377753)
chr8 (543-576)||(14585685-14585718)
chr8 (455-500)||(33214773-33214818)
chr8 (546-619)||(33342448-33342521)
chr8 (545-637)||(39646198-39646291)
chr8 (541-639)||(471176-471271)
chr8 (455-503)||(6831492-6831540)
chr8 (556-624)||(23851489-23851557)
[»] chr2 (57 HSPs)
chr2 (517-639)||(29574641-29574763)
chr2 (545-639)||(32448632-32448725)
chr2 (553-637)||(14423326-14423410)
chr2 (545-639)||(17249160-17249253)
chr2 (455-639)||(37994184-37994366)
chr2 (538-624)||(4904173-4904256)
chr2 (517-625)||(6358898-6359008)
chr2 (517-639)||(10929629-10929752)
chr2 (542-636)||(24461430-24461527)
chr2 (551-634)||(34128702-34128785)
chr2 (546-624)||(459269-459347)
chr2 (551-624)||(9986337-9986410)
chr2 (517-601)||(12647971-12648055)
chr2 (559-655)||(18113890-18113984)
chr2 (551-637)||(4264474-4264557)
chr2 (551-623)||(30420691-30420763)
chr2 (542-624)||(38445159-38445238)
chr2 (453-640)||(6436516-6436695)
chr2 (554-624)||(26025405-26025475)
chr2 (533-623)||(37614121-37614211)
chr2 (551-624)||(2808467-2808540)
chr2 (551-620)||(7015710-7015779)
chr2 (529-582)||(14416148-14416201)
chr2 (551-624)||(27249146-27249219)
chr2 (551-624)||(36234021-36234094)
chr2 (559-639)||(23933632-23933712)
chr2 (544-639)||(37416702-37416797)
chr2 (551-601)||(4228146-4228196)
chr2 (517-624)||(43397147-43397251)
chr2 (551-624)||(3269106-3269179)
chr2 (551-624)||(3269665-3269738)
chr2 (551-624)||(3270224-3270297)
chr2 (541-624)||(4099095-4099175)
chr2 (541-624)||(7677901-7677981)
chr2 (551-655)||(27949439-27949541)
chr2 (551-624)||(34599000-34599073)
chr2 (541-624)||(36943149-36943229)
chr2 (453-506)||(42714647-42714700)
chr2 (543-624)||(1415551-1415629)
chr2 (520-624)||(18763439-18763540)
chr2 (551-582)||(20047119-20047150)
chr2 (551-624)||(33923707-33923777)
chr2 (551-582)||(40659969-40660000)
chr2 (528-582)||(20145797-20145851)
chr2 (551-601)||(32913254-32913304)
chr2 (551-601)||(41431041-41431091)
chr2 (551-624)||(3725193-3725266)
chr2 (541-624)||(5427896-5427976)
chr2 (551-624)||(6173645-6173718)
chr2 (551-624)||(8805879-8805952)
chr2 (545-582)||(28227750-28227787)
chr2 (551-624)||(31580584-31580657)
chr2 (541-573)||(7448239-7448271)
chr2 (455-503)||(11985371-11985419)
chr2 (516-583)||(13141463-13141530)
chr2 (466-506)||(16375871-16375911)
chr2 (455-503)||(33923612-33923660)
[»] chr5 (45 HSPs)
chr5 (551-623)||(36344487-36344559)
chr5 (543-623)||(10332576-10332656)
chr5 (544-639)||(38110960-38111055)
chr5 (557-639)||(8088224-8088305)
chr5 (551-655)||(34881729-34881831)
chr5 (551-619)||(30298219-30298287)
chr5 (553-655)||(3271368-3271468)
chr5 (543-624)||(35850782-35850860)
chr5 (516-582)||(42886454-42886520)
chr5 (517-582)||(28540979-28541044)
chr5 (541-624)||(13007210-13007290)
chr5 (551-624)||(16981301-16981374)
chr5 (551-624)||(41184435-41184508)
chr5 (551-620)||(43261818-43261887)
chr5 (545-639)||(14211205-14211303)
chr5 (541-637)||(19120891-19120986)
chr5 (571-655)||(41214630-41214714)
chr5 (519-583)||(1582159-1582223)
chr5 (519-583)||(1602592-1602656)
chr5 (551-624)||(2057833-2057906)
chr5 (551-655)||(7150301-7150403)
chr5 (553-624)||(31314717-31314789)
chr5 (520-624)||(6012165-6012266)
chr5 (551-582)||(10649655-10649686)
chr5 (543-582)||(19103540-19103579)
chr5 (543-582)||(39567278-39567317)
chr5 (543-577)||(2979384-2979418)
chr5 (546-624)||(7613053-7613131)
chr5 (520-573)||(14082448-14082501)
chr5 (545-623)||(19349679-19349757)
chr5 (545-625)||(25980143-25980220)
chr5 (551-624)||(7886933-7887006)
chr5 (551-624)||(18677460-18677533)
chr5 (551-624)||(19259807-19259879)
chr5 (542-587)||(26510707-26510752)
chr5 (551-624)||(26578263-26578336)
chr5 (541-624)||(26825411-26825491)
chr5 (551-624)||(27266854-27266927)
chr5 (556-601)||(28235601-28235646)
chr5 (532-635)||(37986129-37986229)
chr5 (545-624)||(38007343-38007419)
chr5 (541-624)||(38597778-38597858)
chr5 (467-503)||(1409413-1409449)
chr5 (544-620)||(16758521-16758597)
chr5 (551-583)||(42579899-42579931)
[»] scaffold0347 (1 HSPs)
scaffold0347 (546-620)||(6014-6088)
[»] scaffold0264 (1 HSPs)
scaffold0264 (551-601)||(20414-20464)
[»] scaffold0009 (1 HSPs)
scaffold0009 (570-639)||(58100-58169)
[»] scaffold0039 (1 HSPs)
scaffold0039 (542-624)||(93086-93169)
[»] scaffold0002 (1 HSPs)
scaffold0002 (546-624)||(453936-454014)
[»] scaffold0445 (1 HSPs)
scaffold0445 (541-624)||(1326-1406)
[»] scaffold0426 (1 HSPs)
scaffold0426 (551-624)||(6314-6387)
[»] scaffold0042 (1 HSPs)
scaffold0042 (558-639)||(92508-92589)
[»] scaffold0113 (2 HSPs)
scaffold0113 (544-623)||(36683-36762)
scaffold0113 (467-503)||(36788-36824)
[»] scaffold0003 (1 HSPs)
scaffold0003 (551-582)||(361836-361867)
[»] scaffold0128 (1 HSPs)
scaffold0128 (538-602)||(36809-36870)
[»] scaffold0095 (1 HSPs)
scaffold0095 (571-637)||(9396-9462)
[»] scaffold0127 (1 HSPs)
scaffold0127 (544-624)||(15476-15554)


Alignment Details
Target: chr7 (Bit Score: 372; Significance: 0; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 65 - 655
Target Start/End: Complemental strand, 970030 - 969443
Alignment:
Q  65 gtcaagtttattattatttctcttctatcctttcaaaacagataaagacaatctcaaaattaataattaggttgaaaatataaaagttagttttaggaaa 164  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  970030 gtcaagtttattattatttctcttttatcctttcaaaacagataaagacaatctcaaaagtaataattaggttgaaaatataaaagttagttttaggaaa 969931  T
Q  165 aatataccctggggtgacactgcaaagatcgggcacgtggnnnnnnnnnntacataaaatcagtgggctaacgaattcaaaatactttgattggaatann 264  Q
    |||||||| |||||||||||||||||||||||||||||||          |||||||||||||||||||||| |||||||||||||||||||||||||      
T  969930 aatataccatggggtgacactgcaaagatcgggcacgtggaaaaaaa---tacataaaatcagtgggctaaccaattcaaaatactttgattggaatatt 969834  T
Q  265 nnnnnnactaaacttggattattattaggttttatagtcaatgnnnnnnn---ggcttaacataatttcaacatattcataaaaattatgcaagttgatt 361  Q
          |||||||||||||||||||||||||| ||||||||||          |||||||||||||||||||| |||||||||| || ||||||||||||    
T  969833 ttttt-actaaacttggattattattaggtttgatagtcaatgatgtttttttggcttaacataatttcaacagattcataaaatttttgcaagttgatt 969735  T
Q  362 gaagttcgttttctcttttactcatcaaagaatggtggatttagatcaatttttgatttagaatcacccatatgcatatatatttttcttccatttcttt 461  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | |||| |||||||||||||    
T  969734 gaagttcgttttctctttcactcatcaaagaatggtggatttagatcaatttttgatttagaatcatccatatgcat-ttttttttccttccatttcttt 969636  T
Q  462 agatttaaataagtgattttcacatataataagttttttcttgtgnnnnnnnnncttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtc 561  Q
    |||||||||||||||||||||||||||||||||||||||||||||         |||||||| ||||||||||||||||||||||||| |||||||||||    
T  969635 agatttaaataagtgattttcacatataataagttttttcttgtg-ttttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtc 969537  T
Q  562 ttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggacgtcaa 655  Q
    || ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  969536 ttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaaaaatcatctttagtcaattaatgatttggacgtcaa 969443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 639
Target Start/End: Original strand, 3394374 - 3394555
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttcttgtgnnnnnnnnncttcgtganttcatcgtttgaatgtggcgttgtgctgtt 554  Q
    ||||||| ||| |||||||||||||||||| ||||  |||||||||||||||         |||||||| |||||||| ||| || || |||||| ||||    
T  3394374 tttctttcgatctaaataagtgattttcacgtatatgaagttttttcttgtgtttt-----cttcgtgatttcatcgtctgagtgcggtgttgtgttgtt 3394468  T
Q  555 cgtcgtcttgtgcggcgttgtttgattt--tgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||||||||| || ||||||||||||  || || || |||||||||||| || | |||||||||| ||||| ||| |||||||||    
T  3394469 cgtcgtcttgtgtggtgttgtttgatttcgtgtgtcttcttgcggtgtttgtttagatcatattgaatgatcaacttcagtcaatca 3394555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 517 - 625
Target Start/End: Complemental strand, 24069528 - 24069420
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| |||||||| ||| || ||||||||| ||||||| ||||||||||||||| |||||||| |||| || |||||||||| | ||| ||||||||    
T  24069528 ttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatatt 24069429  T
Q  617 gaaagatca 625  Q
    |||| ||||    
T  24069428 gaaatatca 24069420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 625
Target Start/End: Complemental strand, 26623918 - 26623816
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||| ||| || ||||||||| ||||||||||||||| |||||||   ||||||||| | || |||||||||||| ||||||| |||||||    
T  26623918 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtacggcgtt---tgattttgcatcttgttgcggtgtttgtttggttcctattgaa 26623822  T
Q  620 agatca 625  Q
    ||||||    
T  26623821 agatca 26623816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 546 - 625
Target Start/End: Complemental strand, 32522000 - 32521921
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    |||| |||||||| |||||||||||||||||||||||| |||||| ||| ||||||   ||| |||||||||||||||||    
T  32522000 tgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatca 32521921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 518 - 639
Target Start/End: Complemental strand, 38880711 - 38880590
Alignment:
Q  518 tcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattg 617  Q
    |||||| ||| |||| ||| || | ||||||| |||| | |||||||| || || ||||||||||||| | || |||||||||| | ||||||| |||||    
T  38880711 tcgtgatttcgtcgtatgagtgcgacgttgtgttgtttgccgtcttgtacgacgctgtttgattttgcatcttgttgcggtgttcgtttggttcttattg 38880612  T
Q  618 aaagatcacctttagtcaatca 639  Q
    |||||||| ||| |||||||||    
T  38880611 aaagatcagcttcagtcaatca 38880590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 655
Target Start/End: Complemental strand, 1448898 - 1448796
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    |||||||||| |||||||||||||||||||||  ||| || ||||||||||   ||| |||||||||||||||  || ||| |||||||| ||||||||     
T  1448898 tgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagat--ccattattcaatcaaagatttggat 1448801  T
Q  651 gtcaa 655  Q
    |||||    
T  1448800 gtcaa 1448796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 35667300 - 35667227
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||| ||||||||| ||| || ||||||||||   ||| ||||||||||||||||    
T  35667300 tgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatc 35667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 543 - 639
Target Start/End: Complemental strand, 41553542 - 41553446
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||| |||||||||||||||| | |||| |||||||| |||| || ||  |||||| | |||||||||||||||||||||  || |||||||||    
T  41553542 cgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatca 41553446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 543 - 639
Target Start/End: Complemental strand, 41553887 - 41553791
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||| |||||||||||||||| | |||| |||||||| |||| || ||  |||||| | |||||||||||||||||||||  || |||||||||    
T  41553887 cgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatca 41553791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 639
Target Start/End: Complemental strand, 3224517 - 3224422
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||| ||||||| |||||||||| | || ||||||||  |||||| ||||| |||| | ||||||||||||||| ||||| ||| |||||||||    
T  3224517 gttgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcatattgaaggatcaacttcagtcaatca 3224422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 543 - 639
Target Start/End: Original strand, 28476206 - 28476306
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttat----tgcggtgtttggttggttcatattgaaagatcacctttagtcaatc 638  Q
    ||||||| |||||||||||||||||||||||||||||||| || | || |    ||||||||| | ||||||| ||||||||||||| ||| || |||||    
T  28476206 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatc 28476305  T
Q  639 a 639  Q
    |    
T  28476306 a 28476306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 14627947 - 14627874
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||| |||||||||||||||||||||  ||| ||| | ||||||||  ||| ||||||||||||||||    
T  14627947 tgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatc 14627874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 20116591 - 20116664
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||| |||||||||||||  ||| || ||||||||||   ||| ||||||||||||||||    
T  20116591 tgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatc 20116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 23786584 - 23786657
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||| ||||||||||||||||||  ||| || ||||||||||   ||| ||||||||||||||||    
T  23786584 tgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 37837565 - 37837485
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   |||||||||||||| || | |||||||| | || |||| ||||||||||||    
T  37837565 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgtcttgtcgcggtgttcgtttagttcctattgaaagatc 37837485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 39328897 - 39328817
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| ||  ||| ||||||||||||    
T  39328897 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatc 39328817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 42978594 - 42978674
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   |||||||||  |||||||| |||||||| | || |||| ||||||||||||    
T  42978594 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttctcgttttatcgcggtgttcgtttagttcttattgaaagatc 42978674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 46339063 - 46339136
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| ||  | |||||||   ||| ||||||||||||||||    
T  46339063 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 46339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 9450247 - 9450164
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||||||| |  |||| ||||||||||||    
T  9450247 tgtggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatc 9450164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 639
Target Start/End: Complemental strand, 41554232 - 41554136
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||| |||||||||||||||| | |||| |||||||| |||| || ||  |||||| | |||||||||||||||| ||||  || |||||||||    
T  41554232 cgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaatatcaatttcagtcaatca 41554136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 552 - 635
Target Start/End: Original strand, 2407157 - 2407240
Alignment:
Q  552 gttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtca 635  Q
    ||||||||| || ||||  ||||||| |||||| ||||| |||| ||||||| |||||||||||| ||| |||| |||||||||    
T  2407157 gttcgtcgttttatgcgatgttgtttaattttgtgttttgttgcagtgtttgtttggttcatattaaaatatcaactttagtca 2407240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 625
Target Start/End: Original strand, 6002017 - 6002104
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||||| | || ||||||||||||||||||||||||||||||||  ||| |  | ||||||||   ||| |||||||||||||||||    
T  6002017 tgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaaagatca 6002104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 22742923 - 22742962
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  22742923 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 22742962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 582
Target Start/End: Complemental strand, 24350949 - 24350910
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  24350949 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 24350910  T

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Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 625
Target Start/End: Complemental strand, 31235873 - 31235786
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||||| | || ||||||||||||||||| ||||||||||||||  ||| |  ||||||||||   ||| |||||||||||||||||    
T  31235873 tgtggcggtttgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatca 31235786  T

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Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 38798767 - 38798845
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||| ||||||||||||||||||||   ||||||||||||||||| | || ||||||| ||  ||| ||||||||||||    
T  38798767 cgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcagtgtttgtttatttcctattgaaagatc 38798845  T

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Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 541 - 639
Target Start/End: Original strand, 5775187 - 5775284
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||||| ||||| ||||||| |||||| || |||||||| |||| || |||| ||||| | ||||||||||| |||||||||  || |||||||||    
T  5775187 ggcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatatcgaaagatcagattcagtcaatca 5775284  T

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Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 655
Target Start/End: Original strand, 19560007 - 19560109
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    ||||||||||||||||||||||||||||||||  | |||| |||  |||||   ||| |||||||||||||||     ||| |||||||| |||||||||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagat--tgattattcaatcaaagatttggac 19560104  T
Q  651 gtcaa 655  Q
    |||||    
T  19560105 gtcaa 19560109  T

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Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 655
Target Start/End: Complemental strand, 22927938 - 22927836
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||   ||  ||| |||||||||||  |  ||| |||||||| |||||||||    
T  22927938 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagat--cgattattcaatcaaagatttggac 22927841  T
Q  651 gtcaa 655  Q
    |||||    
T  22927840 gtcaa 22927836  T

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Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 30756926 - 30756846
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| |  |||  ||||||||||||    
T  30756926 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagtttctattgaaagatc 30756846  T

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Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 620
Target Start/End: Original strand, 32684677 - 32684746
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||    
T  32684677 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaa 32684746  T

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Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 624
Target Start/End: Original strand, 42311258 - 42311362
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||| ||| | ||||||| | || ||||||||||||| ||| ||||||||||||||| ||| ||  |||| ||||   ||| |||||||||||    
T  42311258 gtgatttcatcatttaagtgtggcggtttgttgttcgtcgtcttatgcagcgttgtttgattttccgtcttcgtgcgatgttcatttgattcatattgaa 42311357  T
Q  620 agatc 624  Q
    |||||    
T  42311358 agatc 42311362  T

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Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 42408371 - 42408444
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||| ||||||||||||||| ||| ||  |||||| ||   ||| ||||||||||||||||    
T  42408371 tgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatattgaaagatc 42408444  T

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Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 623
Target Start/End: Original strand, 25068045 - 25068147
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||| | ||| || ||||||||| ||||||||| ||||||||| ||| ||| ||||||| | || |||||||||| | || |||| |||||||    
T  25068045 gtgatttcatcatctgagtgcggcgttgtgttgttcgtcg-cttgtgcggtgtttttttattttgcatcttgttgcggtgttcgttttgttcctattgaa 25068143  T
Q  620 agat 623  Q
    ||||    
T  25068144 agat 25068147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 639
Target Start/End: Complemental strand, 35665243 - 35665147
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgt-tttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||| | |||||||| ||||||| ||||||||||||| |||| ||| ||||||| || | ||| ||||||| ||||||||| ||| |||| ||||    
T  35665243 gttgtgttattcgtcgttttgtgcgacgttgtttgatttggcgtctttgttgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatca 35665147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 619
Target Start/End: Complemental strand, 42067129 - 42067061
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    ||||||||||||||||||||| ||||||||||  ||| || ||||||||||   ||| |||||||||||    
T  42067129 tgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa 42067061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 582
Target Start/End: Complemental strand, 1100870 - 1100804
Alignment:
Q  516 cttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    |||||||| |||||||| |||||  |||| | || ||||| ||||||||||||| ||||||||||||    
T  1100870 cttcgtgatttcatcgtatgaatccggcgatatgttgttcatcgtcttgtgcggtgttgtttgattt 1100804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Complemental strand, 1749259 - 1749220
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  1749259 cgttgtgttgttcgtcgtcttgtgcggcattgtttgattt 1749220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 553 - 624
Target Start/End: Original strand, 34773722 - 34773793
Alignment:
Q  553 ttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||| ||||||||||||||||||   || || ||||||||||   ||| ||||||||||||||||    
T  34773722 ttcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatc 34773793  T

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Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 35132926 - 35132965
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  35132926 cgttgtgttgttcgtcgtcttgttcggcgttgtttgattt 35132965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 582
Target Start/End: Complemental strand, 44311926 - 44311860
Alignment:
Q  516 cttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    |||||||| |||||||| ||| || | ||||||  ||||||||||||| |||| |||||||||||||    
T  44311926 cttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgattt 44311860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 48930752 - 48930791
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  48930752 cgttgtgttattcgtcgtcttgtgcggcgttgtttgattt 48930791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 625
Target Start/End: Complemental strand, 5348695 - 5348618
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||| ||||||| || ||||||||   ||||||||||  ||| ||||||||||||| | ||||||| |||||||||||||    
T  5348695 ttgtgttgttcgttgttttgtgcgg---tgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaaagatca 5348618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 623
Target Start/End: Original strand, 17611136 - 17611206
Alignment:
Q  553 ttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||||||||||||| |||||||||||||  || || |||| |||||   ||| |||||||||||||||    
T  17611136 ttcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttgattcatattgaaagat 17611206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 637
Target Start/End: Complemental strand, 29617784 - 29617714
Alignment:
Q  567 cggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    |||||||||||||||| |||| || |||  ||||||| ||| ||| ||||||||||||| |||||| ||||    
T  29617784 cggcgttgtttgatttcgcgtcttgttgtagtgtttgtttgattcgtattgaaagatcaactttagacaat 29617714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 19296854 - 19296934
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||||||| |  |||| | ||||||||||    
T  19296854 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcattttgtcgcggtgtttgttcagttcctcttgaaagatc 19296934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 630
Target Start/End: Original strand, 27997076 - 27997161
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcaccttt 630  Q
    ||||| |||||||| ||||||||  | |||||| ||||||| | || |||| ||||| | ||| ||||||||||||||||| ||||    
T  27997076 ttgtgttgttcgtcatcttgtgcaacattgttttattttgcatcttgttgcagtgttcgtttgattcatattgaaagatcaacttt 27997161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 34899714 - 34899634
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||||||| |  |||| | ||||||||||    
T  34899714 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgctttttgtcgcggtgtttgttcagttcctcttgaaagatc 34899634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 46822024 - 46822097
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||| |||||||||||||||||||||||  ||| ||  |||||||||   ||| |||||||| |||||||    
T  46822024 tgttcgtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatc 46822097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 47590295 - 47590375
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   |||||||||||||| ||   ||||||||||  |  ||| ||||||||||||    
T  47590295 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgtcttgccgcggtgtttgtataattcctattgaaagatc 47590375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 48316919 - 48316839
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||| ||   ||||||||| |||| || | |||||||||| |  |||| ||||||||||||    
T  48316919 ggcgttgtgttgttcgtcgtcttgtgcagc---gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 48316839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 637
Target Start/End: Original strand, 48061416 - 48061499
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    ||||||||||||| |||| ||||   ||||||||||| || | |||||||||| || |||| ||||||||||||  | |||||||||    
T  48061416 tgttcgtcgtcttatgcgacgtt---tgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacattagtcaat 48061499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 7e-26; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 520 - 639
Target Start/End: Complemental strand, 26588603 - 26588484
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||||||| || || |||||| || | |||||||||||||||||||||||||||  ||| || |||||||||| | |||||||||||||||    
T  26588603 gtgaattcatcgtttgagtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaa 26588504  T
Q  620 agatcacctttagtcaatca 639  Q
    |||||| ||| |||||||||    
T  26588503 agatcaacttcagtcaatca 26588484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 520 - 625
Target Start/End: Complemental strand, 34185824 - 34185719
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||||||| || ||| |||||||||| ||||||||||| | |||||||||||||||||| || ||| ||||||   || ||||||||||||    
T  34185824 gtgatttcatcgtttgagtgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatattgaa 34185725  T
Q  620 agatca 625  Q
    ||||||    
T  34185724 agatca 34185719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 544 - 620
Target Start/End: Original strand, 22571457 - 22571533
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||  |||||| | |||||| |||||||||    
T  22571457 gttgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaaa 22571533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 517 - 638
Target Start/End: Original strand, 30493488 - 30493609
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| |||| ||| || || |||||| ||||||||||||||||| |||||||||||||| |  | || ||  |||||| | ||||||||||||    
T  30493488 ttcgtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatatt 30493587  T
Q  617 gaaagatcacctttagtcaatc 638  Q
    ||||||||| ||| ||||||||    
T  30493588 gaaagatcaacttcagtcaatc 30493609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 541 - 639
Target Start/End: Complemental strand, 1933802 - 1933704
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||||| || | ||||||||||||||| ||||||||||||| || |  |||||||||||| |||||||||||  |||||||| ||| | |||||||    
T  1933802 ggcgttgtgttgctagtcgtcttgtgcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatcaaaagatcaacttcaatcaatca 1933704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 541 - 639
Target Start/End: Original strand, 28981157 - 28981255
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||  | || ||| |||||| | |||||||||||| |||||| |  ||||||||||||    
T  28981157 ggcgttgtgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatattcaaagattagttttagtcaatca 28981255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 25064245 - 25064318
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||||||||   ||| ||||||||||||||||    
T  25064245 tgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatc 25064318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 543 - 639
Target Start/End: Original strand, 8102704 - 8102804
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttat----tgcggtgtttggttggttcatattgaaagatcacctttagtcaatc 638  Q
    ||||||| | |||||||||||||||||||||||||||||| || | || |    ||||||||||| ||||||| ||||||||||||| ||| || |||||    
T  8102704 cgttgtgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatcagcttcagacaatc 8102803  T
Q  639 a 639  Q
    |    
T  8102804 a 8102804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 624
Target Start/End: Original strand, 25337574 - 25337652
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| |||||||||||||| |||| ||||||||||||| ||| || ||||||||||   ||| ||||||||||||||||    
T  25337574 tgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatc 25337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 638
Target Start/End: Original strand, 31296791 - 31296897
Alignment:
Q  532 tttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcaccttta 631  Q
    ||||| || ||||||||| ||||| || |||||||||||||||||||||||||| | || |||| |||||   ||| |||||||||||| ||||  || |    
T  31296791 tttgagtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagtttca 31296890  T
Q  632 gtcaatc 638  Q
    |||||||    
T  31296891 gtcaatc 31296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 7881170 - 7881097
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| | | ||  |||||||||   ||| ||||||||||||||||    
T  7881170 tgttcgtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaattgattcatattgaaagatc 7881097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 625
Target Start/End: Complemental strand, 7976284 - 7976203
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    |||||| ||||||||||||||||||||||| ||| ||| ||||| || ||| |||||| | || ||||||||| ||||||||    
T  7976284 gttgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtggtgttcgtttagttcatattaaaagatca 7976203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 23947386 - 23947313
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  | | || ||||||||||   ||| ||||||||||||||||    
T  23947386 tgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatc 23947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 655
Target Start/End: Original strand, 35001599 - 35001701
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||   ||  ||| |||||||||||||   ||| |||||||| |||||||||    
T  35001599 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatca--attattcaatcaaagatttggac 35001696  T
Q  651 gtcaa 655  Q
    |||||    
T  35001697 gtcaa 35001701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 546 - 601
Target Start/End: Complemental strand, 33543693 - 33543638
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    |||| |||||||||||||||||||||||||||||||||  || || ||||||||||    
T  33543693 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgtt 33543638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 625
Target Start/End: Complemental strand, 528458 - 528376
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||||| | || ||| ||||||||||||||||||||||||| || || |||| ||||||| || |||| ||| |||||||||    
T  528458 cgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttcgttcttatcgaaagatca 528376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 639
Target Start/End: Original strand, 545982 - 546108
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttat----tgcggtgtttggttggttca 612  Q
    ||||||| |||||||| | | || | ||||| | |||||||||||||||||| |||||||||||||  | |||| |    ||||||||| | |||||||     
T  545982 ttcgtgatttcatcgtcttagtgcgacgttgcgttgttcgtcgtcttgtgcgacgttgtttgatttcacattttttgttgtgcggtgttcgtttggttcg 546081  T
Q  613 tattgaaagatcacctttagtcaatca 639  Q
    ||||||||||||| ||| || ||||||    
T  546082 tattgaaagatcagcttcagacaatca 546108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 585
Target Start/End: Original strand, 30776650 - 30776692
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgc 585  Q
    ||||||| |||||||| ||||||||||||||||||||||||||    
T  30776650 cgttgtgttgttcgtcatcttgtgcggcgttgtttgattttgc 30776692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 8496976 - 8497049
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||| |||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  8496976 tgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatc 8497049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 12652953 - 12653026
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||| ||||||||||||||||||||||||||| | | ||  |||||||||   ||| ||||||||||||||||    
T  12652953 tgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatc 12653026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 655
Target Start/End: Original strand, 16419167 - 16419269
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||   ||  |||||||||||| ||  |  ||| |||||||| |||||||||    
T  16419167 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaaaat--cgattattcaatcaaagatttggac 16419264  T
Q  651 gtcaa 655  Q
    |||||    
T  16419265 gtcaa 16419269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 623
Target Start/End: Complemental strand, 28635221 - 28635117
Alignment:
Q  519 cgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattga 618  Q
    ||||| ||| || ||||| ||||||| | || ||||||||||||||| ||| ||||||||||||  ||| |  ||||||||||   ||| ||||||||||    
T  28635221 cgtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattga 28635122  T
Q  619 aagat 623  Q
    |||||    
T  28635121 aagat 28635117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 33053275 - 33053195
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| |  |||| | ||||||||||    
T  33053275 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 33053195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 625
Target Start/End: Original strand, 23128580 - 23128682
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||| | | || ||||||||| |||||||||||||||| |||   ||||||||| ||||||| | || ||||||| |  |||| |||||||    
T  23128580 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgttttgtcgcagtgtttgttcagttcttattgaa 23128676  T
Q  620 agatca 625  Q
    ||||||    
T  23128677 agatca 23128682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 8028186 - 8028155
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  8028186 tgttcgtcgtcttgtgcggcgttgtttgattt 8028155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 8196475 - 8196444
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  8196475 tgttcgtcgtcttgtgcggcgttgtttgattt 8196444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 545 - 584
Target Start/End: Original strand, 14801807 - 14801846
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttg 584  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  14801807 ttgtgttgttcgtcgtcttgtgcggcgctgtttgattttg 14801846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 582
Target Start/End: Original strand, 34489224 - 34489290
Alignment:
Q  516 cttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    |||||||| |||||| |  || ||||| | |||| |||||||||||||||||| |||||||||||||    
T  34489224 cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcgacgttgtttgattt 34489290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 625
Target Start/End: Complemental strand, 13546782 - 13546689
Alignment:
Q  529 tcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    |||||||| || ||||||||| ||||||||||||| ||||||   |||||||||||||  || |||  ||||| | |||| |||| |||||||||||    
T  13546782 tcgtttgagtgcggcgttgtgttgttcgtcgtcttatgcggc---gtttgattttgcgccttgttgtagtgttcgtttggatcattttgaaagatca 13546689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 606187 - 606267
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||||||| |||||||||||   ||||||||| || |||| | |||||||||| |  |||| ||||||||||||    
T  606187 ggcgttgtgttgttcgtcatcttgtgcggc---gtttgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatc 606267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 4984635 - 4984562
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||| ||||||||||||  ||| ||  || ||||||   ||| ||||||||||||||||    
T  4984635 tgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttcatttgattcatattgaaagatc 4984562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 7876112 - 7876039
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||| |||||||||||||| | | ||  |||||||||   ||| |||||||| |||||||    
T  7876112 tgttcgtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaattgattcatattaaaagatc 7876039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 601
Target Start/End: Original strand, 8266653 - 8266701
Alignment:
Q  553 ttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||| ||||||||||||||||||||||||  ||| |||||| ||||||    
T  8266653 ttcgttgtcttgtgcggcgttgtttgatttgtcgtcttattgaggtgtt 8266701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 503
Target Start/End: Complemental strand, 11321645 - 11321609
Alignment:
Q  467 taaataagtgattttcacatataataagttttttctt 503  Q
    |||||||||| |||||||||||| |||||||||||||    
T  11321645 taaataagtggttttcacatatattaagttttttctt 11321609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 12165849 - 12165920
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||||||||||||||||||||||||| |||||  || ||| ||||||||||   ||  |||||||||||||||    
T  12165849 tgttcgtcgtcttgtgcggcgttgttcgatttcacg-tttcttgcggtgttcatttaattcatattgaaagat 12165920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 583
Target Start/End: Original strand, 17334791 - 17334819
Alignment:
Q  555 cgtcgtcttgtgcggcgttgtttgatttt 583  Q
    |||||||||||||||||||||||||||||    
T  17334791 cgtcgtcttgtgcggcgttgtttgatttt 17334819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 589
Target Start/End: Complemental strand, 30608619 - 30608576
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttt 589  Q
    ||||||| ||||||||||||||||||||   ||||||||||||||||    
T  30608619 cgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttt 30608576  T

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Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 573
Target Start/End: Complemental strand, 32327324 - 32327292
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgtt 573  Q
    ||||||||| |||||||||||||||||||||||    
T  32327324 ggcgttgtgttgttcgtcgtcttgtgcggcgtt 32327292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 34018462 - 34018510
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttctt 503  Q
    |||||||  ||||||||||||| ||||||||||||  ||||||||||||    
T  34018462 tttctttcaatttaaataagtggttttcacatatatcaagttttttctt 34018510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 517 - 639
Target Start/End: Original strand, 52944286 - 52944408
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| | || ||| || ||||||||| |||||||||| |||||||||||||||| ||||||||| || |||||||||| | ||| ||||||||    
T  52944286 ttcgtgatttcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatatt 52944385  T
Q  617 gaaagatcacctttagtcaatca 639  Q
    ||||||||| ||| |||||||||    
T  52944386 gaaagatcagcttcagtcaatca 52944408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 639
Target Start/End: Original strand, 22300850 - 22300946
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||  | |||||||||||| || | |||| ||||||||||| |||||||||||||    
T  22300850 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatcagctttagtcaatca 22300946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 520 - 639
Target Start/End: Original strand, 28857380 - 28857499
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||| | | || ||||||||| ||||||| |||||||||||||||||||||||  |||| |  |||||||||| | ||| |||||||||||    
T  28857380 gtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattgaa 28857479  T
Q  620 agatcacctttagtcaatca 639  Q
    |||||| ||| |||||||||    
T  28857480 agatcagcttcagtcaatca 28857499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 535 - 639
Target Start/End: Original strand, 18048876 - 18048980
Alignment:
Q  535 gaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtc 634  Q
    ||||| || |||||| |||| ||||||||||| |||||||||||||||||||  || |||||||||| | ||| ||||||||||||||| | ||| ||||    
T  18048876 gaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtc 18048975  T
Q  635 aatca 639  Q
    |||||    
T  18048976 aatca 18048980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 517 - 639
Target Start/End: Complemental strand, 51888345 - 51888223
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| | || ||| || ||||||||| ||||| ||||||| |||| ||||||||||||| || | || |||||||||| | ||||||||||||    
T  51888345 ttcgtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatatt 51888246  T
Q  617 gaaagatcacctttagtcaatca 639  Q
    ||||||||| ||| | |||||||    
T  51888245 gaaagatcaacttcaatcaatca 51888223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 639
Target Start/End: Complemental strand, 31359860 - 31359759
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    ||||| |||||| | |||||||||||||||| |||||| ||||||  ||| || |||| ||||||| ||||||| |||| |||||||| |||||||||||    
T  31359860 tgtggtgttgtgttattcgtcgtcttgtgcgacgttgtatgatttcacgtcttgttgcagtgtttgcttggttcctatttaaagatcaactttagtcaat 31359761  T
Q  638 ca 639  Q
    ||    
T  31359760 ca 31359759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 551 - 649
Target Start/End: Original strand, 868183 - 868279
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttgga 649  Q
    ||||||||||||||||||||||||||||||||  ||| || ||||||||||   ||| |||||||||||||||||   ||| |||||||| ||||||||    
T  868183 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatca--attattcaatcaaagatttgga 868279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 546 - 623
Target Start/End: Original strand, 2624512 - 2624589
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||| |||||||||||||||||||||| |||||||||  ||| || |||||||||||  ||| |||||||||||||||    
T  2624512 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagat 2624589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 10389822 - 10389753
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||   ||| ||||||||||||    
T  10389822 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 10389753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 22611185 - 22611265
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||||||||||| | |||||||||| |  |||| ||||||||||||    
T  22611185 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgcgttttgtcgcggtgtttgttcagttcctattgaaagatc 22611265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 639
Target Start/End: Complemental strand, 36204520 - 36204396
Alignment:
Q  516 cttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcgg-cgttgtttgattttgcgttttattgcggtgtttggttggttcata 614  Q
    |||||||| ||| |||| | | || ||||||||| ||||||||||| ||| ||| ||||||||||||| || | || ||||||||||   ||||||||||    
T  36204520 cttcgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcata 36204421  T
Q  615 ttgaaagatcacctttagtcaatca 639  Q
    |||||| |||| ||| |||||||||    
T  36204420 ttgaaaaatcagcttcagtcaatca 36204396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 543 - 639
Target Start/End: Original strand, 9643389 - 9643485
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||| |||||||||||||| ||| |||||||||||||  | | || |||| ||||| | |||||||||||| |||||||| ||| |||||||||    
T  9643389 cgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatcaacttcagtcaatca 9643485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 36161720 - 36161792
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||| |||||||||| |||||||||||||| |||||| |||||||||| | || |||||||| |||||||    
T  36161720 tgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagat 36161792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 639
Target Start/End: Complemental strand, 22038909 - 22038814
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||| |||||||| | ||||| ||||||||||||||| |||| || ||| |||| | | ||||||||||||||||||||  ||| |||||||||    
T  22038909 gttgtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatca 22038814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 582
Target Start/End: Original strand, 18935753 - 18935818
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| ||| |||| | ||| || ||||||||||||||||||||||||| ||||||||||||||    
T  18935753 ttcgtgatttcgtcgtcttaatttgacgttgtgctgttcgtcgtcttgtgcagcgttgtttgattt 18935818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 543 - 639
Target Start/End: Original strand, 27651941 - 27652041
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgt--tttat--tgcggtgtttggttggttcatattgaaagatcacctttagtcaatc 638  Q
    ||||||| ||||||||||||||||||| |||||||||||| || |  ||| |  ||||||||| | ||||||| ||||||||||||| |||||| |||||    
T  27651941 cgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagctttagacaatc 27652040  T
Q  639 a 639  Q
    |    
T  27652041 a 27652041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 625
Target Start/End: Complemental strand, 53616718 - 53616644
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| |||||||||||||||||    
T  53616718 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 53616644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 4643879 - 4643952
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  4643879 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 4643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 648
Target Start/End: Original strand, 21090173 - 21090270
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttgg 648  Q
    ||||||||||||||| || |||||||||||||| |||||| ||||||||||   ||| ||||||||||| ||| |  | || |||||||| |||||||    
T  21090173 tgttcgtcgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaaggataaattatattcaatcaaagatttgg 21090270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 25273904 - 25273977
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  25273904 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 25273977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 43444414 - 43444487
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| |   |||||||||   ||| ||||||||||||||||    
T  43444414 tgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatc 43444487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 47417683 - 47417756
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  47417683 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 29965656 - 29965728
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| |||||||||||||||    
T  29965656 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagat 29965728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 543 - 625
Target Start/End: Original strand, 36194706 - 36194792
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgt--tttat--tgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||||| |||||||||||||||||||||||||||||||| || |  ||| |  ||||||||| | ||||||| |||||||||||||    
T  36194706 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatca 36194792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 621
Target Start/End: Original strand, 43853445 - 43853521
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaag 621  Q
    ||||| ||||| || ||||||||||||||||||||||| |||| || |||||||| |   |||||||||||||||||    
T  43853445 ttgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaag 43853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 51318006 - 51318078
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||||||||||||||||||| |||||||||||  ||| || ||||||||||   ||| |||||||||||||||    
T  51318006 tgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaaagat 51318078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 601
Target Start/End: Original strand, 55227981 - 55228037
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||| |||| ||||||||||||  ||||||| ||||||||||||||||||||||||    
T  55227981 ttgtgttgtttgtcgtcttgtgcaacgttgttagattttgcgttttattgcggtgtt 55228037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 639
Target Start/End: Complemental strand, 6155359 - 6155238
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| |||| ||| || || |||||| ||| |||| ||||||||| ||||||||||||| | ||||| | || ||||| | ||| ||||||||    
T  6155359 ttcgtgatttcgtcgtctgagtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgtttgattcatatt 6155261  T
Q  617 gaaagatcacctttagtcaatca 639  Q
    |||||||||  || |||||||||    
T  6155260 gaaagatcagtttcagtcaatca 6155238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 546 - 625
Target Start/End: Original strand, 35261207 - 35261286
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    |||| |||| |||||||| ||||||||||||||||||| ||| || ||||||||||   ||| |||||||| ||||||||    
T  35261207 tgtgttgtttgtcgtcttctgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattaaaagatca 35261286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 541 - 603
Target Start/End: Complemental strand, 4142862 - 4142800
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttg 603  Q
    ||||||||| |||||||||||||||||||||  ||||||||| | ||||| | ||||||||||    
T  4142862 ggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttg 4142800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 520 - 635
Target Start/End: Complemental strand, 12199821 - 12199709
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| ||| |||| ||| |||||||||||| ||||| |||| |||||| || ||   ||||||||||| || |||||||||| | || ||||||||||||    
T  12199821 gtgatttcgtcgtctgagtgtggcgttgtgttgttcatcgttttgtgcagcttt---tgattttgcgtcttgttgcggtgttcgtttagttcatattgaa 12199725  T
Q  620 agatcacctttagtca 635  Q
    | |||| ||| |||||    
T  12199724 atatcaacttcagtca 12199709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 655
Target Start/End: Complemental strand, 35965048 - 35964941
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatt 645  Q
    |||| ||||||||||| |||| |||||||||||||||  ||| |||||| ||||||   ||| |||||||| ||||||  |  ||| |||||||| ||||    
T  35965048 tgtgttgttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttgattcatattaaaagat--cgattattcaatcaaagatt 35964951  T
Q  646 tggacgtcaa 655  Q
    ||||||||||    
T  35964950 tggacgtcaa 35964941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 625
Target Start/End: Complemental strand, 52934078 - 52933969
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtg-tttggttggttcatat 615  Q
    ||||| | |||||||| ||| || ||||||||| |||||||| | |||||| |||||||||||||| || | || |||||||| ||   ||| |||||||    
T  52934078 ttcgttatttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatat 52933979  T
Q  616 tgaaagatca 625  Q
    ||||||||||    
T  52933978 tgaaagatca 52933969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 639
Target Start/End: Complemental strand, 2069692 - 2069592
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    ||||||||| || |||||||| || |||||| ||||||||||||| || | || ||||||| ||   |||||||||||||||| ||||  ||||||||||    
T  2069692 tgtggcgttatg-tgttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaatatcagttttagtcaat 2069594  T
Q  638 ca 639  Q
    ||    
T  2069593 ca 2069592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 9528945 - 9528872
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||| ||||   ||| ||||||||||||||||    
T  9528945 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatc 9528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 583
Target Start/End: Complemental strand, 9645622 - 9645585
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    |||| |||||||||||||||||||||||||||||||||    
T  9645622 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttt 9645585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 583
Target Start/End: Complemental strand, 18138986 - 18138949
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    |||| |||||||||||||||||||||||||||||||||    
T  18138986 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttt 18138949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 20569276 - 20569349
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||| ||||| ||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  20569276 tgttcgtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 20569349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 31381740 - 31381667
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||| ||||||||||||||| ||| ||  |||||||||   ||| |||||||| |||||||    
T  31381740 tgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttaatttgattcatattaaaagatc 31381667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 43154082 - 43154009
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||| |||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  43154082 tgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 43154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 582
Target Start/End: Complemental strand, 47320497 - 47320460
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  47320497 ttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 583
Target Start/End: Complemental strand, 49126199 - 49126162
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    |||| |||||||||||||||||||||||||||||||||    
T  49126199 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttt 49126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 49410244 - 49410317
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||| ||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  49410244 tgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 49410317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 601
Target Start/End: Complemental strand, 52204465 - 52204381
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||||| ||| || ||||| |||| ||||| | |||||||||||||||| | | |||||||||||||||| || || |||||||    
T  52204465 ttcgtgatttcgtcatttgagtgtgacgttgagttgttcgtcgtcttgtgtgacattgtttgattttgcgtcttgttacggtgtt 52204381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 503
Target Start/End: Original strand, 14121787 - 14121823
Alignment:
Q  467 taaataagtgattttcacatataataagttttttctt 503  Q
    |||||||||||||||||||||||| ||||||||||||    
T  14121787 taaataagtgattttcacatataacaagttttttctt 14121823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 649
Target Start/End: Complemental strand, 7009053 - 7008977
Alignment:
Q  571 gttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttgga 649  Q
    ||||||||||||||||  ||||||| ||||||| ||| |||||||||||| |||| ||| | ||||  |||||||||||    
T  7009053 gttgtttgattttgcgccttattgcagtgtttgtttgattcatattgaaacatcaacttcaatcaa--aatgatttgga 7008977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 8009429 - 8009398
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  8009429 tgttcgtcgtcttgtgcggcgttgtttgattt 8009398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 9643259 - 9643335
Alignment:
Q  411 tttttgatttagaatcacccatatgcatatatatttttcttccatttctttagatttaaataagtgattttcacatata 489  Q
    |||||||  ||||||||| ||| ||||| | | ||||||  |||||||||| ||| |||||||||||||||||||||||    
T  9643259 tttttgacctagaatcactcatctgcatctttttttttc--ccatttctttcgatctaaataagtgattttcacatata 9643335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 557 - 624
Target Start/End: Complemental strand, 50766574 - 50766507
Alignment:
Q  557 tcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  50766574 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 50766507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 53444122 - 53444200
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||| |||||||||||||||||||   | |||||||| ||||||| | |||||||||| ||  ||| ||||||||||||    
T  53444122 cgttgtgttgttcgtcgtcttgtgcgg---tatttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatc 53444200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 623
Target Start/End: Complemental strand, 3336230 - 3336152
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcgg-cgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||| ||||||||||| ||||||| |||||||||||||| | | || ||||||||||   ||| |||||||||||||||    
T  3336230 tgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatcttgttgcggtgttcatttgattcatattgaaagat 3336152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 616
Target Start/End: Complemental strand, 9145992 - 9145917
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgat----tttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||| |||||||||||||||||||| |||||||||    ||| | | || |||||||||||| ||||||||||||    
T  9145992 ttgtgttgttcgtcgtcttgtgcggcattgtttgatttcgttttcatcttgttgcggtgtttgtttggttcatatt 9145917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 624
Target Start/End: Original strand, 32766519 - 32766596
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| |  |||| |||| |||||||    
T  32766519 gttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatc 32766596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 624
Target Start/End: Original strand, 53811025 - 53811110
Alignment:
Q  536 aatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| |||||| || ||||||||||||||||||||   ||||||||| ||||||| | |||| ||||| |  |||| ||||||||||||    
T  53811025 aatgcggcgttttgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggggtttgttcagttcctattgaaagatc 53811110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 56194622 - 56194672
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||    
T  56194622 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgtt 56194672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 9283932 - 9284005
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| ||||||||||| |||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  9283932 tgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9284005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 17949431 - 17949351
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||| ||||| ||||||||||||   |||||||||||||| | |||||||| | ||  ||| ||||||||||||    
T  17949431 ggcgttgtgttgtttgtcgtgttgtgcggcgtt---tgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatc 17949351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 17953283 - 17953203
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||| ||||| ||||||||||||   |||||||||||||| | |||||||| | ||  ||| ||||||||||||    
T  17953283 ggcgttgtgttgtttgtcgtgttgtgcggcgtt---tgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatc 17953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 19853619 - 19853539
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||| || ||| ||   ||||||||||||||||  ||||||||| |  |||| ||||||||||||    
T  19853619 ggcgttgtgttgttcgtcgtcttatgtggcatt---tgattttgcgttttatcacggtgtttgttcagttcctattgaaagatc 19853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 503
Target Start/End: Original strand, 4937764 - 4937800
Alignment:
Q  467 taaataagtgattttcacatataataagttttttctt 503  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  4937764 taaataagtgattttcatatatattaagttttttctt 4937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 9048673 - 9048745
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||| |||||||||||||||||||| |||||| | || || |||||||||| | ||||||  | |||||||||    
T  9048673 tgtttgtcgtcttgtgcggcgttgtctgatttcgggtcttgttgcggtgttcgtttggtttcttttgaaagat 9048745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 9146085 - 9146037
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttctt 503  Q
    ||||||| |||||||||| || ||||||||| ||| |||||||||||||    
T  9146085 tttctttcgatttaaataggttattttcacaaatattaagttttttctt 9146037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 489
Target Start/End: Original strand, 9634593 - 9634629
Alignment:
Q  453 catttctttagatttaaataagtgattttcacatata 489  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  9634593 catttctttcgatctaaataagtgattttcacatata 9634629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 503
Target Start/End: Original strand, 33920984 - 33921020
Alignment:
Q  467 taaataagtgattttcacatataataagttttttctt 503  Q
    |||||||||||||||||||||||  ||||||||||||    
T  33920984 taaataagtgattttcacatatatcaagttttttctt 33921020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 573
Target Start/End: Original strand, 35348309 - 35348341
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgtt 573  Q
    ||||||||| |||||||||||||||||||||||    
T  35348309 ggcgttgtgttgttcgtcgtcttgtgcggcgtt 35348341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 625
Target Start/End: Complemental strand, 35395780 - 35395696
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||||||| ||||||||||||||| || ||||||||||| | | || || | |||| ||| | ||| ||| |||||||||||||    
T  35395780 ggcgttgtgttgttcgtcgtcttgttcgacgttgtttgatctagtgtcttgtcgcggcgttcgtttgtttcttattgaaagatca 35395696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 601
Target Start/End: Original strand, 37683889 - 37683949
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||||||| ||||| ||||||||||  | |||||||||||| |||| || ||||||||||    
T  37683889 ggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgtt 37683949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 47158148 - 47158196
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttctt 503  Q
    |||||||  ||||||||||||||||| ||||||||  ||||||||||||    
T  47158148 tttctttcaatttaaataagtgatttccacatatatcaagttttttctt 47158196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 3e-25; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 517 - 639
Target Start/End: Complemental strand, 12947408 - 12947286
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| |||||||| || ||| ||||| |||||||||||||||||||||||||||||||| || | || ||| |||||| | ||||||||||||    
T  12947408 ttcgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatatt 12947309  T
Q  617 gaaagatcacctttagtcaatca 639  Q
    |||| |||| ||| |||||||||    
T  12947308 gaaatatcaacttcagtcaatca 12947286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 517 - 639
Target Start/End: Original strand, 29239297 - 29239419
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| |||||||| ||| || ||||||||| ||||||||||||||||||||| ||||||||||  ||| || ||| |||||| | ||||||| ||||    
T  29239297 ttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtatt 29239396  T
Q  617 gaaagatcacctttagtcaatca 639  Q
    | ||||||| ||| |||||||||    
T  29239397 ggaagatcagcttcagtcaatca 29239419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 535 - 639
Target Start/End: Complemental strand, 4396450 - 4396346
Alignment:
Q  535 gaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtc 634  Q
    ||||| || |||||| |||| ||||||||||| |||||||||||||||||||  || |||||||||| | ||| ||||||||||||||| | ||| ||||    
T  4396450 gaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtc 4396351  T
Q  635 aatca 639  Q
    |||||    
T  4396350 aatca 4396346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 624
Target Start/End: Complemental strand, 36734765 - 36734687
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||   ||| |||||| |||||||||    
T  36734765 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaaagatc 36734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 467 - 625
Target Start/End: Original strand, 53508133 - 53508288
Alignment:
Q  467 taaataagtgattttcacatataataagttttttcttgtgnnnnnnnnncttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtg 566  Q
    |||||||||||||||||||||||  |||||||||||| ||          ||||||| ||| |||| |||||| ||||||||| |||||||||||||||     
T  53508133 taaataagtgattttcacatatatcaagttttttcttctgtgtttt----ttcgtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtcttgta 53508228  T
Q  567 cggcgttgtttgattt-tgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||  ||||||||||||   |||||| |||| ||||| | ||||||| |||||||||||||    
T  53508229 cgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctattgaaagatca 53508288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 551 - 639
Target Start/End: Original strand, 4821796 - 4821883
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||||||||||||  | | |||||||||||||||| || |||||||||| | ||||||||||||||||||||| ||| |||||||||    
T  4821796 tgttcgtcgtcttgtt-gacattgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagcttgagtcaatca 4821883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 35175386 - 35175480
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| ||||| ||||||||||| ||||||||||||||   || || |||||||||| | |||||| |||||||||||||| ||| |||||||||    
T  35175386 ttgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatca 35175480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 639
Target Start/End: Complemental strand, 53807963 - 53807870
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| ||||||||||||| |||||| ||||||||||| || | || |||| ||||| | ||||||||||||||||||||| ||| |||||||||    
T  53807963 ttgtgttgttcgtcgtcttctgcggcattgtttgatttggcatcttgttgctgtgttcg-ttggttcatattgaaagatcaacttcagtcaatca 53807870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 42719523 - 42719596
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  42719523 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 42719596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 543 - 639
Target Start/End: Complemental strand, 21289926 - 21289826
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttat----tgcggtgtttggttggttcatattgaaagatcacctttagtcaatc 638  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| | || |    ||||||||| | ||||||| ||||||||||||| ||| || |||||    
T  21289926 cgttgtggtgttcgttgtcttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatc 21289827  T
Q  639 a 639  Q
    |    
T  21289826 a 21289826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 49552292 - 49552242
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  49552292 tgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgtt 49552242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 9998448 - 9998528
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| || |||| | ||||||||||    
T  9998448 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaaagatc 9998528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 620
Target Start/End: Original strand, 21488097 - 21488166
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    |||| |||||||||||||||||||||||||||  ||| || |||||||||||  ||| ||||||||||||    
T  21488097 tgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaa 21488166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 625
Target Start/End: Original strand, 22803009 - 22803102
Alignment:
Q  532 tttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||| ||||||| | || ||||||||||||| ||||||||||||||||||  ||| |  ||||||||||   ||| |||||||||||||||||    
T  22803009 tttgagtgtggcggtttgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatca 22803102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 630
Target Start/End: Complemental strand, 27706364 - 27706247
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttat----tgcggtgtttggttggttca 612  Q
    ||||||| ||| |||| | | |||| ||||||| ||||||||||||||||||||||||||| |||| || | || |    ||||||||| | |||||||     
T  27706364 ttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggcgttgtttaatttcgcatcttttgttgtgcggtgttcgtttggttcg 27706265  T
Q  613 tattgaaagatcaccttt 630  Q
    ||||||||||||| ||||    
T  27706264 tattgaaagatcagcttt 27706247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 625
Target Start/End: Original strand, 29922011 - 29922119
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| |||| ||| |||||||||||| ||||   ||||||||| | ||| ||||||||| |||| || ||||||||| |  || |||||||||    
T  29922011 ttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatatt 29922110  T
Q  617 gaaagatca 625  Q
    |||||||||    
T  29922111 gaaagatca 29922119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 625
Target Start/End: Original strand, 29971164 - 29971272
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| |||| ||| |||||||||||| ||||   ||||||||| | ||| ||||||||| |||| || ||||||||| |  || |||||||||    
T  29971164 ttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatatt 29971263  T
Q  617 gaaagatca 625  Q
    |||||||||    
T  29971264 gaaagatca 29971272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 35499266 - 35499193
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  35499266 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 35499193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 46934648 - 46934721
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||| ||||||||||||  ||| || ||||||||||   ||| ||||||||||||||||    
T  46934648 tgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 46934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 40487306 - 40487387
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||||  |||||||| |||| || | |||||||||| |  |||| ||||||||||||    
T  40487306 ggcgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 40487387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 638
Target Start/End: Original strand, 51923677 - 51923802
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgt--tttat--tgcggtgtttggttggttca 612  Q
    ||||||| ||| |||| | | |||| ||||||| |||||||| |||||||||||||| ||||||||||| |  ||| |  ||||||||| | |||||||     
T  51923677 ttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgttatttgattttgcatcatttgttgtgcggtgttcgtttggttcg 51923776  T
Q  613 tattgaaagatcacctttagtcaatc 638  Q
    ||||||||||||| ||| || |||||    
T  51923777 tattgaaagatcagcttcagacaatc 51923802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 7546590 - 7546629
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  7546590 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 7546629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 584
Target Start/End: Complemental strand, 25461134 - 25461068
Alignment:
Q  518 tcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttg 584  Q
    |||||| ||| |||||||| || |||||| || ||||||||||||| |||| |||||||||||||||    
T  25461134 tcgtgacttcgtcgtttgagtgcggcgttatgttgttcgtcgtcttatgcgacgttgtttgattttg 25461068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 639
Target Start/End: Original strand, 41818166 - 41818287
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| |||||||| ||| || | | ||||| |||||||||||||||||||  ||||||||||| |||| || ||| | || || ||| |||| ||||    
T  41818166 ttcgtgatttcatcgtatgagtgcgacattgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtgatg-ttcgtttgttcctatt 41818264  T
Q  617 gaaagatcacctttagtcaatca 639  Q
    ||||||||| ||| | |||||||    
T  41818265 gaaagatcaacttcaatcaatca 41818287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 603
Target Start/End: Complemental strand, 43488700 - 43488638
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttg 603  Q
    |||||||||||| ||||||||||||||||||||   ||||||||| |||| || ||||||||||||    
T  43488700 tgtggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgttgcggtgtttg 43488638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 51487086 - 51487125
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  51487086 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 51487125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 582
Target Start/End: Original strand, 16235376 - 16235441
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| |||||||| | | || | ||||||| |||||| |||||||||||||||||||||||||    
T  16235376 ttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgccgtcttgtgcggcgttgtttgattt 16235441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 29503468 - 29503518
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||||||||||||||||||| ||||||||||| ||| || ||||||||||    
T  29503468 tgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtt 29503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 624
Target Start/End: Original strand, 31794072 - 31794150
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| |||||||||| ||||||||||||||||||||||   | || ||||||||||   ||| ||||||||||||||||    
T  31794072 tgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaagatc 31794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 10108217 - 10108297
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| |  |||| | ||||||||||    
T  10108217 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgctcagttcctcttgaaagatc 10108297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 10233051 - 10233131
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| |  |||| | ||||||||||    
T  10233051 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 10233131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 12116104 - 12116177
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||| ||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  12116104 tgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 12116177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 25162442 - 25162515
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  | | ||  |||||||||   ||| ||||||||||||||||    
T  25162442 tgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaaagatc 25162515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 36461538 - 36461458
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| |||| || | |||||||||| |  |||| ||||||||||||    
T  36461538 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaaagatc 36461458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 635
Target Start/End: Complemental strand, 20609006 - 20608915
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtca 635  Q
    ||||||||| |||| ||||||||||||||| ||   ||||||||||| || | |||||||||| || |||| |||||||| |||| | |||||||    
T  20609006 ggcgttgtgttgttagtcgtcttgtgcggcatt---tgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaatatcaacattagtca 20608915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 638
Target Start/End: Original strand, 29249189 - 29249308
Alignment:
Q  519 cgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattga 618  Q
    ||||| ||| || |||||||||| | ||||| ||||| |||| |||||| ||||| |||||||| |  | |||||| ||||||   ||| ||||| ||||    
T  29249189 cgtgatttcgtcctttgaatgtgacattgtgttgttcatcgttttgtgcagcgttctttgatttcgaatcttattgtggtgttcatttgattcatcttga 29249288  T
Q  619 aagatcacctttagtcaatc 638  Q
    ||||||| ||| ||||||||    
T  29249289 aagatcagcttcagtcaatc 29249308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 32607475 - 32607547
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||||||||||||||| |||||||||||||||  ||| ||  |||||||||   ||| |||||||||||||||    
T  32607475 tgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagat 32607547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 582
Target Start/End: Original strand, 42460725 - 42460765
Alignment:
Q  542 gcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  42460725 gcgttgtgttgttcatcgtcttgtgcggcgttgtttgattt 42460765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 52923227 - 52923144
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||| |||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| |  |||| | ||||||||||    
T  52923227 tgtggcgctgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 52923144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 545 - 584
Target Start/End: Original strand, 8914690 - 8914729
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttg 584  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  8914690 ttgtgttgttcgtcgtcttgtgcggcgctgtttgattttg 8914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 9797631 - 9797561
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||||||||   ||||||||||| || | |||||||||| |  |||| ||||||||||||    
T  9797631 tgttcgtcgtcttgtgcggcgtt---tgattttgcgtcttgtcgcggtgtttgttcagttcctattgaaagatc 9797561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Original strand, 36906128 - 36906159
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  36906128 tgttcgtcgtcttgtgcggcgttgtttgattt 36906159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 503
Target Start/End: Complemental strand, 52116190 - 52116151
Alignment:
Q  464 atttaaataagtgattttcacatataataagttttttctt 503  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  52116190 atttaaataagtgattttcacatatatcaagttttttctt 52116151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 629003 - 628935
Alignment:
Q  570 cgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||||||||| |  | || |||||||||| | ||||||||||||||||||||| ||| |||||||||    
T  629003 cgttgtttgatttggaatcttgttgcggtgttcg-ttggttcatattgaaagatcagcttcagtcaatca 628935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 6954803 - 6954723
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||  ||||||||||||||||||||   ||||||||| ||||||| |  ||||||||| |  |||| ||||||||||||    
T  6954803 ggcgttgtattgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcacggtgtttgttcagttcctattgaaagatc 6954723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 10229457 - 10229537
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||||||| |||||||||||   ||||||||| ||||||| | |||||||||| |  |||| | ||||||||||    
T  10229457 ggcgttgtgttgttcgtcatcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 10229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 21533916 - 21533836
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||| ||||   ||||| ||| |||| || | |||||||||| || |||| ||||||||||||    
T  21533916 ggcgttgtgttgttcgtcgtcttgtacggc---gtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatc 21533836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 623
Target Start/End: Complemental strand, 26739462 - 26739385
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||| ||||| | |||||||||||||| |||||||||||| | || ||| | ||| || ||||||| |||||||||||    
T  26739462 tgtgttgttcattgtcttgtgcggcgtcgtttgattttgcatcttgttgtgatgtctgtttggttcctattgaaagat 26739385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 655
Target Start/End: Complemental strand, 30648787 - 30648685
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    ||||||||||||||||||| |||||||| |||  | | || ||||||||||   ||  |||||||||||||||  |  ||| |||||||| |||||||||    
T  30648787 tgttcgtcgtcttgtgcggtgttgtttgctttcccatcttcttgcggtgttcattttattcatattgaaagat--cgattattcaatcaaagatttggac 30648690  T
Q  651 gtcaa 655  Q
    |||||    
T  30648689 gtcaa 30648685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 35865039 - 35864959
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||| ||||||||||| ||||||   ||||||||||| || | |||||||| | || |||| ||||||||||||    
T  35865039 ggcgttgtgttgttagtcgtcttgtgtggcgtt---tgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatc 35864959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 639
Target Start/End: Original strand, 44805029 - 44805106
Alignment:
Q  562 ttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||||||||||||| ||||  ||| || |||||||||| | ||||| |||||||||| |||| | | |||||||||    
T  44805029 ttgtgcggcgttgtttaatttcacgtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatca 44805106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 46322425 - 46322356
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    |||||||||| |||| ||| |||||||| |||| ||| || ||||||||||   ||||||||||||||||    
T  46322425 tgttcgtcgttttgtacggtgttgtttgtttttccgtcttgttgcggtgttcatttggttcatattgaaa 46322356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 639
Target Start/End: Original strand, 32246435 - 32246523
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||| ||||| ||||||| ||||||||||||  |||| || ||||| ||||   ||||||| ||||||||||||| ||| ||| |||||    
T  32246435 tgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgctgttcacttggttcctattgaaagatcaacttcagttaatca 32246523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 624
Target Start/End: Original strand, 33579862 - 33579941
Alignment:
Q  542 gcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||| |||||||||||||||||  ||||   ||||||||||| || | |||||||| | ||  ||||||||||||||||    
T  33579862 gcgttgtgttgttcgtcgtcttgtgcatcgtt---tgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatc 33579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 555 - 599
Target Start/End: Original strand, 37169241 - 37169285
Alignment:
Q  555 cgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtg 599  Q
    ||||||||||||| ||||||||||||||| ||| || ||||||||    
T  37169241 cgtcgtcttgtgcagcgttgtttgattttccgtattgttgcggtg 37169285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 573
Target Start/End: Original strand, 40556693 - 40556725
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgtt 573  Q
    ||||||||| |||||||||||||||||||||||    
T  40556693 ggcgttgtgttgttcgtcgtcttgtgcggcgtt 40556725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 47042240 - 47042192
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttctt 503  Q
    |||||||  ||||||||||||||||||||||||||  | ||||||||||    
T  47042240 tttctttcaatttaaataagtgattttcacatatatcatgttttttctt 47042192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 3e-25; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 517 - 639
Target Start/End: Original strand, 47132861 - 47132983
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| |||| ||| || ||||||||| |||||||||| |||||||||||||||| |||| |||| || |||||||||| | ||| ||||||||    
T  47132861 ttcgtgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatatt 47132960  T
Q  617 gaaagatcacctttagtcaatca 639  Q
    ||||||||| ||| |||||||||    
T  47132961 gaaagatcagcttcagtcaatca 47132983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 541 - 639
Target Start/End: Original strand, 12635152 - 12635250
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||| | | ||||||   ||||||||||||||||||||| ||||||| |||||    
T  12635152 ggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatcaactttagtaaatca 12635250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 44543259 - 44543352
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||| || |||||||||||||||||| || | ||||||||||| || |||||||||||||||||||||| |||||||||||||    
T  44543259 ttgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtg-ttcgttggttcatattgaaagatcagctttagtcaatca 44543352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 49626900 - 49626993
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| ||||||||||||||||||||||||||||||||  | | || |||||||| || |||||||||||||||||||||| ||| |||||||||    
T  49626900 ttgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcagcttcagtcaatca 49626993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 24582937 - 24583030
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| ||||| ||| |||||||||||||||||||||| || | || |||||||| || |||||||||||||||||||||| ||| |||||||||    
T  24582937 ttgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatcagcttcagtcaatca 24583030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 551 - 637
Target Start/End: Complemental strand, 31692566 - 31692481
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    |||| |||||||||||||| ||||||||||||||| | || |||||||| || |||||||||||||||||||| | |||||||||||    
T  31692566 tgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtg-ttcgttggttcatattgaaagattagctttagtcaat 31692481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 520 - 640
Target Start/End: Original strand, 41994388 - 41994508
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||| ||| |||||| ||||||||| ||||| ||||||||||| |||||||||||||| |  | || ||| |||||| | || ||||||||||||    
T  41994388 gtgatttcaacgtctgaatgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaa 41994487  T
Q  620 agatcacctttagtcaatcaa 640  Q
    ||||||  || ||||||||||    
T  41994488 agatcagtttcagtcaatcaa 41994508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 34528716 - 34528810
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||||||| |||| |||||||||||| || | || || ||||||||  |||||| |||||||||||||| ||| |||||||||    
T  34528716 ttgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagatcaacttcagtcaatca 34528810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 35584686 - 35584613
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  35584686 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 35584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 39987402 - 39987475
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  39987402 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatc 39987475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 538 - 639
Target Start/End: Complemental strand, 40163610 - 40163509
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    |||| ||||||| | |||||||||||||||  | || ||||||| |||||||| |||||||||||| ||||||  ||||| ||||||| ||| |||||||    
T  40163610 tgtgacgttgtgttcttcgtcgtcttgtgcaacattctttgattatgcgttttgttgcggtgtttgtttggtttctattggaagatcagcttcagtcaat 40163511  T
Q  638 ca 639  Q
    ||    
T  40163510 ca 40163509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 517 - 587
Target Start/End: Complemental strand, 32679229 - 32679159
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgt 587  Q
    ||||||| |||||||| ||| || ||||||||| |||||||| ||||||||||||| ||||||||| ||||    
T  32679229 ttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgatttcgcgt 32679159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 19060896 - 19060989
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||||||||| |||||||||||||||  | | || |||| ||| || |||||||||||||||||||| | ||| |||||||||    
T  19060896 ttgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtg-ttcgttggttcatattgaaagattagcttcagtcaatca 19060989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 624
Target Start/End: Complemental strand, 39927627 - 39927549
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| |||||||||||||||| |||||||||||||||  ||| || ||||||||||   ||| ||||||||||||||||    
T  39927627 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaaagatc 39927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 616
Target Start/End: Original strand, 9341719 - 9341784
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||||||||||||| ||||||||||||| || || || |||||||||||| ||| ||||||||    
T  9341719 tgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttgcggtgtttgtttgattcatatt 9341784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 623
Target Start/End: Original strand, 21686858 - 21686937
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||||| |||||||||||||||||||||||   |||||||||||||| | |||||||||| |   ||| |||||||||||    
T  21686858 ggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgttttgtcgcggtgtttgttaatttcctattgaaagat 21686937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 625
Target Start/End: Original strand, 44915603 - 44915705
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||| | | |||||||||||| |||| ||| | ||||||||| ||   |||||||||||||| | |||||||| | || ||||||||||||    
T  44915603 gtgatttcatcgtctaattgtggcgttgtgatgttagtcatattgtgcggcatt---tgattttgcgttttgtcgcggtgttcgtttagttcatattgaa 44915699  T
Q  620 agatca 625  Q
    ||||||    
T  44915700 agatca 44915705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 16161818 - 16161857
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  16161818 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 16161857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 553 - 639
Target Start/End: Complemental strand, 6217925 - 6217839
Alignment:
Q  553 ttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||| |||||||||||||||||| || ||  | |||| | |||||  |||||||||||||| ||| |||||||||    
T  6217925 ttcgttgtcttgtgcgacgttgtttgattttgcgtcttgttatgttgttcgtttggtatatattgaaagatcaacttcagtcaatca 6217839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 572 - 654
Target Start/End: Original strand, 15492313 - 15492394
Alignment:
Q  572 ttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggacgtca 654  Q
    ||||||||||| |||| || ||| || ||||| |||||||||||||||| |||| ||| | |||||||||||||||| |||||    
T  15492313 ttgtttgatttcgcgtcttgttggggagtttgtttggttcatattgaaa-atcaacttcaatcaatcaatgatttgggcgtca 15492394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 529 - 639
Target Start/End: Original strand, 16262831 - 16262941
Alignment:
Q  529 tcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacct 628  Q
    |||| ||| ||||||| || | |||| || || ||||||||||||||||||||| |||| || ||| |||||| | ||| |||||||||||| |||| ||    
T  16262831 tcgtctgagtgtggcgatgcgttgttggttgttttgtgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaact 16262930  T
Q  629 ttagtcaatca 639  Q
      |||||||||    
T  16262931 gcagtcaatca 16262941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 620
Target Start/End: Original strand, 5701272 - 5701341
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||    
T  5701272 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 5701341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 655
Target Start/End: Original strand, 9172503 - 9172605
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||   ||  ||| |||||||||||  |  ||| |||||||| |||||||||    
T  9172503 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagat--cgattattcaatcaaagatttggac 9172600  T
Q  651 gtcaa 655  Q
    |||||    
T  9172601 gtcaa 9172605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 655
Target Start/End: Original strand, 9180485 - 9180587
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||   ||  ||| |||||||||||  |  ||| |||||||| |||||||||    
T  9180485 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagat--cgattattcaatcaaagatttggac 9180582  T
Q  651 gtcaa 655  Q
    |||||    
T  9180583 gtcaa 9180587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 9687272 - 9687199
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||| |||||||||||||||||||||||  | | || ||||||||||   ||| ||||||||||||||||    
T  9687272 tgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaagatc 9687199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 19715963 - 19715890
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||| ||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  19715963 tgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 19715890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 28035152 - 28035225
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  | |||||||   ||| ||||||||||||||||    
T  28035152 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatc 28035225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 30879089 - 30879161
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||| |||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  30879089 tgttcgtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 30879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 582
Target Start/End: Complemental strand, 34413200 - 34413163
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34413200 ttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 34413163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 34519145 - 34519218
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||| |||||||||||||||||||||  ||| || ||| ||||||   ||| ||||||||||||||||    
T  34519145 tgttcgtcgttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatc 34519218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 34878385 - 34878305
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||||||||||||||||||   |||||||||| ||||||| | |||||||||| |   ||| ||||||||||||    
T  34878385 ggcgttgtgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaaagatc 34878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 655
Target Start/End: Complemental strand, 51868713 - 51868611
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||   ||  ||| |||||||||||  |  ||| |||||||| |||||||||    
T  51868713 tgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagat--cgattattcaatcaaagatttggac 51868616  T
Q  651 gtcaa 655  Q
    |||||    
T  51868615 gtcaa 51868611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 623
Target Start/End: Complemental strand, 33291486 - 33291414
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||||||||||||||| ||||||||||||| |||  |  |||||||||   ||| |||||||||||||||    
T  33291486 tgttcgtcgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagat 33291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 624
Target Start/End: Complemental strand, 7337791 - 7337690
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||| | | || ||||||||| |||||||||||||||||  |   ||||||||| |||| || | |||||||||| |  ||||||||||||    
T  7337791 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaac---gtttgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaa 7337695  T
Q  620 agatc 624  Q
    |||||    
T  7337694 agatc 7337690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Original strand, 7997802 - 7997833
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  7997802 tgttcgtcgtcttgtgcggcgttgtttgattt 7997833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 40881080 - 40881049
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  40881080 tgttcgtcgtcttgtgcggcgttgtttgattt 40881049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 45426134 - 45426103
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  45426134 tgttcgtcgtcttgtgcggcgttgtttgattt 45426103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 48750165 - 48750204
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  48750165 cgttgtgttgttcgtcgtcttgtgcgacgttgtttgattt 48750204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 3871421 - 3871471
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||||||||||||||| ||||||||||||||  ||| || ||||||||||    
T  3871421 tgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcttgcggtgtt 3871471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 51871876 - 51871926
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    |||||||||||||||||| ||||||||| |||| ||| || ||||||||||    
T  51871876 tgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgtt 51871926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 799886 - 799813
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| ||| |||||||| | ||||||||| |||  || |||||||||||||   ||||||||||||||||||||    
T  799886 tgtttgtcatcttgtgcagtgttgtttgaatttttgtcttattgcggtgttcatttggttcatattgaaagatc 799813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 5983821 - 5983901
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||| || ||||||||||||||||||||   ||||||||| | || || | |||||||||| || |||| ||||||||||||    
T  5983821 ggcgttttgttgttcgtcgtcttgtgcggc---gtttgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaaagatc 5983901  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 503
Target Start/End: Original strand, 15492189 - 15492242
Alignment:
Q  450 ttccatttctttagatttaaataagtgattttcacatataataagttttttctt 503  Q
    ||||||||||||  || ||||||| |||||||||||||||  ||||||||||||    
T  15492189 ttccatttctttcaatctaaataaatgattttcacatatatcaagttttttctt 15492242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 620
Target Start/End: Original strand, 31836820 - 31836889
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    ||||||||||||||||||| ||||||||||||  ||| ||  |||||||||   ||| ||||||||||||    
T  31836820 tgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 31836889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 625
Target Start/End: Original strand, 44637419 - 44637508
Alignment:
Q  536 aatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||||| | |||| ||||||| |||||||||| ||||||||| |||  ||| || || |||||||   ||| |||||||||||||||||    
T  44637419 aatgtggtgatgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatca 44637508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 50272208 - 50272139
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    |||||||||| |||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||    
T  50272208 tgttcgtcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa 50272139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 583
Target Start/End: Original strand, 19723346 - 19723378
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    ||||||||||||| |||||||||||||||||||    
T  19723346 tgttcgtcgtcttctgcggcgttgtttgatttt 19723378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 7e-23; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 544 - 639
Target Start/End: Original strand, 5333413 - 5333508
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| || || ||||||| | ||||||| ||||||||||||| ||| |||||||||    
T  5333413 gttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcagtcaatca 5333508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 544 - 639
Target Start/End: Complemental strand, 29617379 - 29617284
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||| ||||||||||||||||||||| |||||||||| |||| || |||||||||| | ||||||| |||||||||| || ||| |||||||||    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatca 29617284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 545 - 639
Target Start/End: Complemental strand, 1236800 - 1236707
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| ||||||| |||||||||||||||||||||||| || | || |||||||| || |||||||||||||||||||||| ||| |||||||||    
T  1236800 ttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatcaacttcagtcaatca 1236707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 545 - 639
Target Start/End: Complemental strand, 1239500 - 1239407
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| ||||| |||||||||||||||||||||||||| || | || |||||||| || |||||||||||||||||||||| ||| |||||||||    
T  1239500 ttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatcaacttcagtcaatca 1239407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 544 - 639
Target Start/End: Complemental strand, 8443616 - 8443521
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||| |||||||||||||||||||||||||||||||  |||| || |||| ||||| | ||||||||  ||||||||||| ||| |||||||||    
T  8443616 gttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaacttcagtcaatca 8443521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 3240365 - 3240459
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| ||||||||||||||| || ||||||||||||| |||| || ||| |||||||| |||||| |||||||||||||  ||| |||||||||    
T  3240365 ttgtgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatca 3240459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 455 - 638
Target Start/End: Complemental strand, 24099449 - 24099266
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttcttgtgnnnnnnnnncttcgtganttcatcgtttgaatgtggcgttgtgctgtt 554  Q
    ||||||| |||||||||||||||||| |||||| |  |||| ||||||| |          |||||||| ||| |||| ||| || | ||||||| ||||    
T  24099449 tttctttcgatttaaataagtgatttccacatagatcaagtgttttcttttttgttttattcttcgtgatttcgtcgtctgagtgcgacgttgtgttgtt 24099350  T
Q  555 cgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatc 638  Q
    ||||||| ||| | |||||||||||||| || | || ||||||||||   |||||||||||||||| |||| ||| ||||||||    
T  24099349 cgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaaaatcagcttcagtcaatc 24099266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 15344294 - 15344387
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||||||||||||||| |||||||||  | | || |||||||| || ||||||||||||||||||||||  || |||||||||    
T  15344294 ttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatca 15344387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 15433359 - 15433452
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||||||||||||||| |||||||||  | | || |||||||| || ||||||||||||||||||||||  || |||||||||    
T  15433359 ttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatca 15433452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 15524663 - 15524756
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||||||||||||||| |||||||||  | | || |||||||| || ||||||||||||||||||||||  || |||||||||    
T  15524663 ttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtg-ttcgttggttcatattgaaagatcaagttcagtcaatca 15524756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 551 - 625
Target Start/End: Complemental strand, 44100002 - 44099928
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||||||||||||||||||||||||||||||  ||| || ||||||||||   ||| |||||||||||||||||    
T  44100002 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatca 44099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 4808980 - 4809053
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  4808980 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 4809053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 35580473 - 35580546
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||| |||||||||||||| ||| || |||||||||| | ||| ||||||||||| ||||    
T  35580473 tgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatc 35580546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 551 - 619
Target Start/End: Original strand, 11196905 - 11196973
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||   ||| |||||||||||    
T  11196905 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa 11196973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 624
Target Start/End: Original strand, 36532900 - 36532986
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||  | |||| ||  |||||||  ||||||| ||||||||||||    
T  36532900 tgtggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaaagatc 36532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 9619425 - 9619352
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  9619425 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9619352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 625
Target Start/End: Original strand, 28239830 - 28239923
Alignment:
Q  532 tttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||| ||||||| | || |||||||||||||||||||||||||||||||   ||| || ||||||||||   ||| || ||||||||||||||    
T  28239830 tttgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatca 28239923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 43192414 - 43192341
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| || ||| ||||||   ||| ||||| ||||||||||    
T  43192414 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatc 43192341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 34611820 - 34611892
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||||||||||||||||||||||||||||| |||  |  |||||||||   ||| |||||||||||||||    
T  34611820 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagat 34611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 639
Target Start/End: Complemental strand, 18890809 - 18890709
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttat----tgcggtgtttggttggttcatattgaaagatcacctttagtcaatc 638  Q
    ||||||| |||||||||||||||||| ||||||||||||| || |||| |    || |||||| | ||||||| ||||||||||||| ||| || |||||    
T  18890809 cgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcattttttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcagacaatc 18890710  T
Q  639 a 639  Q
    |    
T  18890709 a 18890709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 541 - 639
Target Start/End: Original strand, 34609814 - 34609911
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||| | ||||| |||||||||||| |||| |||||||||| || || |||||||||| | ||| |||  |||||||||||| ||| |||||||||    
T  34609814 ggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgttcgtttgtttc-cattgaaagatcaacttcagtcaatca 34609911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 2655886 - 2655959
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||| ||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  2655886 tgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 7883346 - 7883266
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   |||||||||  ||| || | |||||||||| |  |||||||||||||||||    
T  7883346 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaagatc 7883266  T

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Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 11464187 - 11464260
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||   || ||  |||||||||   ||| ||||||||||||||||    
T  11464187 tgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaagatc 11464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 625
Target Start/End: Complemental strand, 25191171 - 25191091
Alignment:
Q  542 gcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    |||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||||||| ||  ||| |||||||||||||    
T  25191171 gcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgctttttgtcgcggtgtttgtttatttcctattgaaagatca 25191091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 42448095 - 42448026
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    |||||||||||||||||||| |||||||||||| ||| ||  |||||||||   ||| ||||||||||||    
T  42448095 tgttcgtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaaa 42448026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 622
Target Start/End: Original strand, 21237784 - 21237852
Alignment:
Q  554 tcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaaga 622  Q
    ||||| ||||||| |||||||||||| || |||| || |||| ||||| | ||||||||||||||||||    
T  21237784 tcgtcatcttgtggggcgttgtttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaaga 21237852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 564 - 639
Target Start/End: Original strand, 8981167 - 8981242
Alignment:
Q  564 gtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||||||| |||||||| |||| || |||||||||| | ||| || |||||||||||||| | | |||||||||    
T  8981167 gtgcggcgttttttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatca 8981242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 17693709 - 17693639
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||| ||||||||||||||   |||||||||||||| | |||||||||| || |||| |||| |||||||    
T  17693709 tgttcgtcttcttgtgcggcgtt---tgattttgcgttttgtcgcggtgtttgtttagttcctattaaaagatc 17693639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 582
Target Start/End: Complemental strand, 20227413 - 20227347
Alignment:
Q  516 cttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    |||||||| |||||||| ||| || | ||||||  ||||||||||||| |||| |||||||||||||    
T  20227413 cttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgattt 20227347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 32724549 - 32724518
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  32724549 tgttcgtcgtcttgtgcggcgttgtttgattt 32724518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Original strand, 39657441 - 39657472
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  39657441 tgttcgtcgtcttgtgcggcgttgtttgattt 39657472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 624
Target Start/End: Complemental strand, 40211428 - 40211327
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| ||| |||| | |||||||||||||| ||||||||||||| ||| |   |||||||||| |||| || | |||||||||| || |||  |||||||    
T  40211428 gtgatttcgtcgtctaaatgtggcgttgtgttgttcgtcgtcttatgcag---tgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaa 40211332  T
Q  620 agatc 624  Q
    |||||    
T  40211331 agatc 40211327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 41896496 - 41896535
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  41896496 cgttgtgttgttggtcgtcttgtgcggcgttgtttgattt 41896535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 583
Target Start/End: Original strand, 15889574 - 15889604
Alignment:
Q  553 ttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    |||||||||||||||||||||||||||||||    
T  15889574 ttcgtcgtcttgtgcggcgttgtttgatttt 15889604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 581
Target Start/End: Original strand, 19876227 - 19876257
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgatt 581  Q
    |||||||||||||||||||||||||||||||    
T  19876227 tgttcgtcgtcttgtgcggcgttgtttgatt 19876257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 637
Target Start/End: Original strand, 39450552 - 39450618
Alignment:
Q  571 gttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    ||||||||||||| |||||||||| |||||| | ||||||  | ||||||||||| ||| |||||||    
T  39450552 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaat 39450618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 10377673 - 10377753
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||||| |||||||||||||   ||||||||| ||||||| | | |||||||| |  |||| ||||||||||||    
T  10377673 ggcgttgtgttgttcgccgtcttgtgcggc---gtttgatttcgcgttttgtcgtggtgtttgttcagttcctattgaaagatc 10377753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 576
Target Start/End: Original strand, 14585685 - 14585718
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtt 576  Q
    ||||||| ||||||||||||||||||||||||||    
T  14585685 cgttgtgttgttcgtcgtcttgtgcggcgttgtt 14585718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 500
Target Start/End: Complemental strand, 33214818 - 33214773
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagtttttt 500  Q
    |||||||  ||||||||||||||||||| |||||| ||||||||||    
T  33214818 tttctttcaatttaaataagtgattttcgcatatattaagtttttt 33214773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 619
Target Start/End: Original strand, 33342448 - 33342521
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| ||||| ||||||| ||||||||| ||||||||  ||| || |||||||||||  ||| |||||||||||    
T  33342448 tgtgttgttcttcgtcttatgcggcgttttttgatttcccgtattgttgcggtgtttatttgattcatattgaa 33342521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 637
Target Start/End: Complemental strand, 39646291 - 39646198
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttc-atattgaaagatcacctttagtcaat 637  Q
    ||||| ||||||  |||||||||||||||||||||||||||  ||| |||  ||||||| ||||| | ||||||||| |||  || ||||||||    
T  39646291 ttgtgttgttcgcggtcttgtgcggcgttgtttgattttgcaatttgttgtagtgtttgtttggtcctatattgaaacatctactatagtcaat 39646198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 639
Target Start/End: Complemental strand, 471271 - 471176
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||| |||| |||||||||||| ||||| ||||   |||||||| || || |||||||| | | ||||||| ||||||||||||| ||| | |||||||    
T  471271 ggcgctgtgttgttcgtcgtctggtgcgacgtt---tgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 471176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 6831492 - 6831540
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttctt 503  Q
    ||||||| |||| |||||||||| |||||||||||  ||||||||||||    
T  6831492 tttctttcgattcaaataagtgaatttcacatatatcaagttttttctt 6831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 556 - 624
Target Start/End: Complemental strand, 23851557 - 23851489
Alignment:
Q  556 gtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||| |||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  23851557 gtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 23851489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 639
Target Start/End: Complemental strand, 29574763 - 29574641
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| ||||  || || ||||||||| |||||||||||||||||||| |||||||||||  | |||| |||| ||||||| ||| ||||||||    
T  29574763 ttcgtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatatt 29574664  T
Q  617 gaaagatcacctttagtcaatca 639  Q
    ||||||| | ||| |||||||||    
T  29574663 gaaagattagcttcagtcaatca 29574641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 545 - 639
Target Start/End: Complemental strand, 32448725 - 32448632
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||||||||||| ||||||||||||| || | || |||||||| || |||||||||||||||||||||| ||| |||||||||    
T  32448725 ttgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtg-ttcgttggttcatattgaaagatcagcttcagtcaatca 32448632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 553 - 637
Target Start/End: Original strand, 14423326 - 14423410
Alignment:
Q  553 ttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    |||||||||||||||  |||||||||||||  | ||||||||||||||||| ||||||| ||||||||||||  |||||||||||    
T  14423326 ttcgtcgtcttgtgcatcgttgtttgatttcacattttattgcggtgtttgtttggttcttattgaaagatcgactttagtcaat 14423410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 639
Target Start/End: Complemental strand, 17249253 - 17249160
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||||||||||||||| |||| |||| || | || ||||||||||| ||||||||||||||||||||||  || |||||||||    
T  17249253 ttgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgttt-gttggttcatattgaaagatcagtttcagtcaatca 17249160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 455 - 639
Target Start/End: Original strand, 37994184 - 37994366
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttcttgtgnnnnnnnnncttcgtganttcatcgtttgaatgtggcgttgtgctgtt 554  Q
    ||||||| ||||||||||||||||||||||||| |  |||| ||||||||||         |||||||| ||| | || ||| || ||||||||| ||||    
T  37994184 tttctttcgatttaaataagtgattttcacatagatcaagtgttttcttgtgtttttat--cttcgtgatttcgttgtctgagtgcggcgttgtgttgtt 37994281  T
Q  555 cgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||| || ||| |||| |||||||||||||| | || |||| |||||   ||| |||||||||||| |||| ||| |||||||||    
T  37994282 cgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagcttcagtcaatca 37994366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 4904256 - 4904173
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||| |||||||||||||||||| ||||   |||||||| || || |||||||||| | ||||||||||||||||||||    
T  4904256 tgtggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatc 4904173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 517 - 625
Target Start/End: Complemental strand, 6359008 - 6358898
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattg--cggtgtttggttggttcata 614  Q
    ||||||| ||  |||| ||| |||| ||||||| ||||||||||||||||| |||||||||||||| || | || |||  ||||||||| ||||||| ||    
T  6359008 ttcgtgattttgtcgtctgagtgtgtcgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttctta 6358909  T
Q  615 ttgaaagatca 625  Q
    |||||||||||    
T  6358908 ttgaaagatca 6358898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 517 - 639
Target Start/End: Original strand, 10929629 - 10929752
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttg-tttgattttgcgttttattgcggtgtttggttggttcatat 615  Q
    ||||||| ||| |||| ||| || || |||||| ||||||||||||||| || ||||| |||||||| |||| || |||||||||| | ||||||||| |    
T  10929629 ttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcatgt 10929728  T
Q  616 tgaaagatcacctttagtcaatca 639  Q
    ||||| |||| ||| |||||||||    
T  10929729 tgaaaaatcagcttcagtcaatca 10929752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 636
Target Start/End: Original strand, 24461430 - 24461527
Alignment:
Q  542 gcgttgtgctgttcgtcgtcttgtgcggcgttgtttgatt---ttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaa 636  Q
    |||||||| ||||||| || ||||||||||||||||||||   |||||  || |||||||||| | ||||||||||||||||||||| ||| ||||||    
T  24461430 gcgttgtgttgttcgttgttttgtgcggcgttgtttgattattttgcgccttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaa 24461527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 551 - 634
Target Start/End: Complemental strand, 34128785 - 34128702
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtc 634  Q
    |||||||||||||||||| |||||||||||| ||||| || ||| |||||||| ||||||| |||| |||||||  ||||||||    
T  34128785 tgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcctattaaaagatcgactttagtc 34128702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 546 - 624
Target Start/End: Complemental strand, 459347 - 459269
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||||| || |||||||||||||| ||| || ||||||||||   ||| ||||||||||||||||    
T  459347 tgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 9986410 - 9986337
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  9986410 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 601
Target Start/End: Complemental strand, 12648055 - 12647971
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||||| |||||||| | | || || |||||| ||||||||||||||||||||||||||||||||  ||| || ||||||||||    
T  12648055 ttcgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgtt 12647971  T

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Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 559 - 655
Target Start/End: Original strand, 18113890 - 18113984
Alignment:
Q  559 gtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggacgtcaa 655  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    ||||||||||||||| ||||   ||| ||||| ||||||||||| |||||    
T  18113890 gtcttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaatatca--gttattcaataaatgatttggatgtcaa 18113984  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 551 - 637
Target Start/End: Original strand, 4264474 - 4264557
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    |||||||||||||||||||   |||||||||| |||| |||||||||||||   ||||||| ||||||||||||| ||| |||||||    
T  4264474 tgttcgtcgtcttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaat 4264557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 551 - 623
Target Start/End: Original strand, 30420691 - 30420763
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||   ||| |||||||||||||||    
T  30420691 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagat 30420763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 624
Target Start/End: Original strand, 38445159 - 38445238
Alignment:
Q  542 gcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||| ||||||||||||||||||||   ||||||||| ||||||||| |||||||||| |  |||| ||||||||||||    
T  38445159 gcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttatcgcggtgtttgttcagttcctattgaaagatc 38445238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 453 - 640
Target Start/End: Original strand, 6436516 - 6436695
Alignment:
Q  453 catttctttagatttaaataagtgattttcacatataataagttttttcttgtgnnnnnnnnncttcgtganttcatcgtttgaatgtggcgttgtgctg 552  Q
    ||||||||| ||| ||||||||||||||||||| |||  |||||||||||| |           ||||||| ||||| || ||| ||||| |||||| ||    
T  6436516 catttctttcgatctaaataagtgattttcacacatataaagttttttctttttatcttt----ttcgtgatttcatggtctgagtgtggtgttgtg-tg 6436610  T
Q  553 ttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaa 640  Q
    |||||||||||||||| ||||   ||||||||| | || || ||||||| |  ||||||||| |||||||||| ||| ||||||||||    
T  6436611 ttcgtcgtcttgtgcgacgtt---tgattttgcatcttgttacggtgttcgtctggttcataatgaaagatcagcttcagtcaatcaa 6436695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 624
Target Start/End: Complemental strand, 26025475 - 26025405
Alignment:
Q  554 tcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||   ||| ||||| ||||||||||    
T  26025475 tcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatc 26025405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 623
Target Start/End: Complemental strand, 37614211 - 37614121
Alignment:
Q  533 ttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||| ||||| | |||| ||||| |||||||||||| |||||||||||||| ||| || ||||||||||   ||| |||||||||||||||    
T  37614211 ttgagtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagat 37614121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 2808540 - 2808467
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||| ||||    || ||||||||||||||||    
T  2808540 tgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaaagatc 2808467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 7015779 - 7015710
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||    
T  7015779 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaa 7015710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 14416148 - 14416201
Alignment:
Q  529 tcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||| ||||||||  |||||||||||||||| |||||||||||||||    
T  14416148 tcgtttgaatgcggcgttgtattgttcgtcgtcttgtgtggcgttgtttgattt 14416201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 27249219 - 27249146
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  27249219 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27249146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 36234021 - 36234094
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  36234021 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 36234094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 639
Target Start/End: Complemental strand, 23933712 - 23933632
Alignment:
Q  559 gtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||||||||| ||||||||| ||||| | || |||||||||| | ||||||| ||||||||| ||| ||| |||||||||    
T  23933712 gtcttgtgcggtgttgtttgaatttgcatcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatca 23933632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 639
Target Start/End: Original strand, 37416702 - 37416797
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||| |||||||||||||||||| |||||||||||||  | | || |||   |||| |||||||||||||||||| |||| ||  |||||||||    
T  37416702 gttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgttcggttggttcatattgaaatatcaactcgagtcaatca 37416797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 4228146 - 4228196
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||    
T  4228146 tgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgtt 4228196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 624
Target Start/End: Complemental strand, 43397251 - 43397147
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatatt 616  Q
    ||||||| ||| |||| | | |||||||||||| |||||||||||||||| |||   ||||||||| |||| || | |||||||| | ||  ||||||||    
T  43397251 ttcgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgttcgtttatttcatatt 43397155  T
Q  617 gaaagatc 624  Q
    ||||||||    
T  43397154 gaaagatc 43397147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 3269179 - 3269106
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||| ||||| |||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  3269179 tgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 3269738 - 3269665
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||| ||||| |||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  3269738 tgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3269665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 3270297 - 3270224
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||| ||||| |||||||||||||||| ||| ||  |||||||||   ||| ||||||||||||||||    
T  3270297 tgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3270224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 4099095 - 4099175
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||| ||||||||||||   ||||||||||||||||| | | |||||||| |  |||| ||||||||||||    
T  4099095 ggcgttgtgttgttcgttgtcttgtgcggc---gtttgattttgcgttttgtcgtggtgtttgttcagttcctattgaaagatc 4099175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 7677981 - 7677901
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| |||| ||||  ||||||||| |  |||| ||||||||||||    
T  7677981 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttatctcggtgtttgttcagttcctattgaaagatc 7677901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 655
Target Start/End: Original strand, 27949439 - 27949541
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    ||||||||||||||| ||||||||||||||||  ||| || ||||| ||||   ||| ||||||| |||||||||   ||| |||||||| ||||||| |    
T  27949439 tgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatatcgaaagatca--attattcaatcaaagatttgggc 27949536  T
Q  651 gtcaa 655  Q
    |||||    
T  27949537 gtcaa 27949541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 34599000 - 34599073
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||| ||||||||||||||||||||||||||| | | ||  |||||||||   ||| ||||||||||||||||    
T  34599000 tgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatc 34599073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 36943229 - 36943149
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| |||| || | |||||||||| || ||||  |||||||||||    
T  36943229 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtattgtcgcggtgtttgtttagttccaattgaaagatc 36943149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 506
Target Start/End: Original strand, 42714647 - 42714700
Alignment:
Q  453 catttctttagatttaaataagtgattttcacatataataagttttttcttgtg 506  Q
    ||||||||| ||| ||||||||||||||| |||||||  |||||||||||||||    
T  42714647 catttctttcgatctaaataagtgatttttacatatatcaagttttttcttgtg 42714700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 1415551 - 1415629
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||| ||||| ||||||||||||||   ||||||||| ||||||| | |||||||||| ||  ||| ||||||||||||    
T  1415551 cgttgtgttgttcttcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatc 1415629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 624
Target Start/End: Original strand, 18763439 - 18763540
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||| | | || || |||||| ||||||||||||||||||||   ||||||||| |||| ||||  ||||||| | || |||| |||||||    
T  18763439 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttatcacggtgttcgtttagttcctattgaa 18763535  T
Q  620 agatc 624  Q
    |||||    
T  18763536 agatc 18763540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 20047150 - 20047119
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  20047150 tgttcgtcgtcttgtgcggcgttgtttgattt 20047119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 33923707 - 33923777
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||   ||||||||| ||||||||| | |||||||| ||  ||| ||||||||||||    
T  33923707 tgttcgtcgtcttgtgcggc---gtttgatttcgcgttttatcgtggtgtttgtttatttcctattgaaagatc 33923777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 40660000 - 40659969
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  40660000 tgttcgtcgtcttgtgcggcgttgtttgattt 40659969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 528 - 582
Target Start/End: Complemental strand, 20145851 - 20145797
Alignment:
Q  528 atcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||| ||| |||||||||||| |||| || ||||||||||||||||||| ||||    
T  20145851 atcgtctgagtgtggcgttgtgttgttggttgtcttgtgcggcgttgtttaattt 20145797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 32913254 - 32913304
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    ||||||||||||||||||||| ||||||||||| ||| || || |||||||    
T  32913254 tgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttacggtgtt 32913304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 601
Target Start/End: Original strand, 41431041 - 41431091
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||    
T  41431041 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgtt 41431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 3725193 - 3725266
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||| ||||||| ||||||||||||||||  ||| ||  || |||||| | ||| ||||||||||||||||    
T  3725193 tgttcgttgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgattcatattgaaagatc 3725266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Complemental strand, 5427976 - 5427896
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||| || |||||||||||||||| |||   ||||||||| |||| || | |||||||||| || |||||||||| ||||||    
T  5427976 ggcgttttgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatc 5427896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 6173645 - 6173718
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||| |||||||| |||||||||||||||| | | ||  |||||||||   ||| ||||||||||||||||    
T  6173645 tgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaaagatc 6173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 8805879 - 8805952
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||| |||||||||||||  ||| ||  || ||||||   ||| ||||||||||||||||    
T  8805879 tgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatc 8805952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 582
Target Start/End: Complemental strand, 28227787 - 28227750
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  28227787 ttgtgctgttcgtcgtcttgtgcgacgttgttagattt 28227750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 31580657 - 31580584
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||| ||||  ||| ||  |||||||||   ||| || |||||||||||||    
T  31580657 tgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaagatc 31580584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 573
Target Start/End: Original strand, 7448239 - 7448271
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgtt 573  Q
    ||||||||| |||||||||||||||||||||||    
T  7448239 ggcgttgtgttgttcgtcgtcttgtgcggcgtt 7448271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Complemental strand, 11985419 - 11985371
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttctt 503  Q
    |||||||  ||||||||||||| ||||||||||||  ||||||||||||    
T  11985419 tttctttcaatttaaataagtggttttcacatatatcaagttttttctt 11985371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 583
Target Start/End: Original strand, 13141463 - 13141530
Alignment:
Q  516 cttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    |||||||| |||||||| | |||||| | ||||| |||||||||| ||||||   |||||||||||||    
T  13141463 cttcgtgatttcatcgtctaaatgtgactttgtgttgttcgtcgttttgtgcattgttgtttgatttt 13141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 16375871 - 16375911
Alignment:
Q  466 ttaaataagtgattttcacatataataagttttttcttgtg 506  Q
    |||||||| |||||||||||||||  |||||||||||||||    
T  16375871 ttaaataaatgattttcacatatatcaagttttttcttgtg 16375911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 503
Target Start/End: Original strand, 33923612 - 33923660
Alignment:
Q  455 tttctttagatttaaataagtgattttcacatataataagttttttctt 503  Q
    |||||||  ||||||||||||| |||||||| ||| |||||||||||||    
T  33923612 tttctttcaatttaaataagtggttttcacacatattaagttttttctt 33923660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 551 - 623
Target Start/End: Complemental strand, 36344559 - 36344487
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||   ||| |||||||||||||||    
T  36344559 tgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagat 36344487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 623
Target Start/End: Complemental strand, 10332656 - 10332576
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||||| |||| ||||||||||||||| ||||||||||| |||| || |||| ||||||| ||| |||||||||||||||    
T  10332656 cgttgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagat 10332576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 639
Target Start/End: Complemental strand, 38111055 - 38110960
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||| |||| || |||||||||||||||||||||||||| || || |||| ||||||| ||||||| |||||||| ||||  || |||||||||    
T  38111055 gttgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttcctattgaaatatcaatttaagtcaatca 38110960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 557 - 639
Target Start/End: Complemental strand, 8088305 - 8088224
Alignment:
Q  557 tcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||||||||||||||||||||||| || | || |||| ||||| | ||||||||||||||||||||| ||| |||||||||    
T  8088305 tcgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcg-ttggttcatattgaaagatcagcttcagtcaatca 8088224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 551 - 655
Target Start/End: Original strand, 34881729 - 34881831
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    ||||||||||||||||||||||||||||||||  ||| ||  |||||||||   ||| |||||||||||||||||   ||| |||||||| ||||||| |    
T  34881729 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca--attattcaatcaaagatttgggc 34881826  T
Q  651 gtcaa 655  Q
    |||||    
T  34881827 gtcaa 34881831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 551 - 619
Target Start/End: Original strand, 30298219 - 30298287
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    ||||||||||||||||||||| ||||||||||| ||| || |||||||||||  ||| |||||||||||    
T  30298219 tgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 30298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 553 - 655
Target Start/End: Complemental strand, 3271468 - 3271368
Alignment:
Q  553 ttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggacgt 652  Q
    ||||||||||||||| ||||||||||||||| ||| ||  |||||||||   ||| |||||||||||||||  || ||| | |||||| |||||||||||    
T  3271468 ttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagat--ccattatttaatcaaagatttggacgt 3271371  T
Q  653 caa 655  Q
    |||    
T  3271370 caa 3271368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 543 - 624
Target Start/End: Original strand, 35850782 - 35850860
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||| ||||||||||||||||||||   ||||||||| ||||||||| |||||||||| ||  ||| ||||||||||||    
T  35850782 cgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttatcgcggtgtttgtttatttcctattgaaagatc 35850860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 582
Target Start/End: Original strand, 42886454 - 42886520
Alignment:
Q  516 cttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    |||||||| |||||| | ||| ||||| | |||| ||||||||||||||||||||||||||||||||    
T  42886454 cttcgtgatttcatcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattt 42886520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 582
Target Start/End: Complemental strand, 28541044 - 28540979
Alignment:
Q  517 ttcgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| |||||||| | | || | ||||||| ||||||||||||||||||||||||||||||||    
T  28541044 ttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgattt 28540979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 13007210 - 13007290
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||||| ||||| | |||||||||| || |||| | ||||||||||    
T  13007210 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgattttgtgttttgtcgcggtgtttgtttagttcctcttgaaagatc 13007290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 16981301 - 16981374
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||||| |||||| ||||| ||| || ||||||||||   ||| ||||||||||||||||    
T  16981301 tgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaaagatc 16981374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 41184508 - 41184435
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||||||||||||||  ||| ||  || |||||| | ||| ||||||||||||||||    
T  41184508 tgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattgaaagatc 41184435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 620
Target Start/End: Complemental strand, 43261887 - 43261818
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    ||||||||||||| ||||| ||||||||||||| ||| || |||||||||||  ||| ||||||||||||    
T  43261887 tgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaa 43261818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 639
Target Start/End: Original strand, 14211205 - 14211303
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgt--tttat--tgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    ||||| |||||||||||||||||||||||||||||||| || |  ||| |  ||||||||| | ||||||| ||||||||||||| ||| || ||||||    
T  14211205 ttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatca 14211303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 637
Target Start/End: Original strand, 19120891 - 19120986
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    ||||||||| ||||||||||||| || ||| ||||||||||| |||| || |||||||||||| ||| ||| | ||| ||||||| ||| |||||||    
T  19120891 ggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttg-aagatcagcttcagtcaat 19120986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 655
Target Start/End: Complemental strand, 41214714 - 41214630
Alignment:
Q  571 gttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggacgtcaa 655  Q
    |||||||||||| |||| ||||| | ||||||  ||| || |||||||||||||| ||||| |||||||| |||||| |||||||    
T  41214714 gttgtttgatttcgcgtcttatttccgtgtttctttgatttatattgaaagatcagctttaatcaatcaaagatttgaacgtcaa 41214630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 583
Target Start/End: Complemental strand, 1582223 - 1582159
Alignment:
Q  519 cgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    ||||| |||||||| ||| || | |||||||  ||| ||||||||||||||||||||||||||||    
T  1582223 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttt 1582159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 583
Target Start/End: Original strand, 1602592 - 1602656
Alignment:
Q  519 cgtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    ||||| |||||||| ||| || | |||||||  ||| ||||||||||||||||||||||||||||    
T  1602592 cgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttt 1602656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 2057906 - 2057833
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||| |||||||||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  2057906 tgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 2057833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 655
Target Start/End: Complemental strand, 7150403 - 7150301
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatcaatgatttggac 650  Q
    |||||||||||||||||||||||||||| |||  ||| || ||||||||||   ||  |||  ||||||||||||   ||| |||||||| |||||||||    
T  7150403 tgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcccattgaaagatca--attattcaatcaaagatttggac 7150306  T
Q  651 gtcaa 655  Q
    |||||    
T  7150305 gtcaa 7150301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 624
Target Start/End: Original strand, 31314717 - 31314789
Alignment:
Q  553 ttcgtcgtct-tgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||| |||| |||||||||| |||| || | || |||||||||||| ||||||||||||||| ||||    
T  31314717 ttcgtcgtctatgtgaggcgttgttttatttcgcttcttgttgcggtgtttgtttggttcatattgaatgatc 31314789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 624
Target Start/End: Complemental strand, 6012266 - 6012165
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaa 619  Q
    |||| |||||||| | | || || |||||| ||||||||||||||||||||   ||||||||| ||||||| | |||||||||| |  |||| |||| ||    
T  6012266 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctattaaa 6012170  T
Q  620 agatc 624  Q
    |||||    
T  6012169 agatc 6012165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Original strand, 10649655 - 10649686
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  10649655 tgttcgtcgtcttgtgcggcgttgtttgattt 10649686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Complemental strand, 19103579 - 19103540
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  19103579 cgttgtgttgttagtcgtcttgtgcggcgttgtttgattt 19103540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 582
Target Start/End: Original strand, 39567278 - 39567317
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  39567278 cgttgtgttgttcgttgtcttgtgcggcgttgtttgattt 39567317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 577
Target Start/End: Complemental strand, 2979418 - 2979384
Alignment:
Q  543 cgttgtgctgttcgtcgtcttgtgcggcgttgttt 577  Q
    ||||||| |||||||||||||||||||||||||||    
T  2979418 cgttgtgttgttcgtcgtcttgtgcggcgttgttt 2979384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 624
Target Start/End: Complemental strand, 7613131 - 7613053
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| |||||||||||||||||   ||||||||||||  ||| || ||||||||||   ||| ||||||||||||||||    
T  7613131 tgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatc 7613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 520 - 573
Target Start/End: Complemental strand, 14082501 - 14082448
Alignment:
Q  520 gtganttcatcgtttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgtt 573  Q
    |||| |||||||| | | |||||||||||| ||||||||||||||| |||||||    
T  14082501 gtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttgtacggcgtt 14082448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 623
Target Start/End: Original strand, 19349679 - 19349757
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    ||||| ||||||||||||||||||||||| ||||||||  ||| |  ||||  |||| | ||||||| |||||||||||    
T  19349679 ttgtgttgttcgtcgtcttgtgcggcgttatttgatttcacgtctagttgcaatgttcgtttggttcctattgaaagat 19349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 625
Target Start/End: Original strand, 25980143 - 25980220
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatca 625  Q
    ||||| ||||||||||||||||||||   |||| |||| |||| || | |||||||||| || |||| |||||||||||||    
T  25980143 ttgtgttgttcgtcgtcttgtgcggc---gtttaatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatca 25980220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 7887006 - 7886933
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||| |  | |||||||||||| ||| || ||||||||||||  || |||||||| |||||||    
T  7887006 tgttcgtcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgattcatattaaaagatc 7886933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 18677533 - 18677460
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||| | |||||||||||||| ||| ||  | |||||||   ||| ||||||||||||||||    
T  18677533 tgttcgtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 18677460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 19259879 - 19259807
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||| |||||||||||   ||| ||  ||||||||||  ||| ||||||||||||||||    
T  19259879 tgttcgtcgtcttgtgcggtgttgtttgattcc-cgtcttcgtgcggtgtttatttgattcatattgaaagatc 19259807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 587
Target Start/End: Complemental strand, 26510752 - 26510707
Alignment:
Q  542 gcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgt 587  Q
    |||||||| | |||||| ||||||||| ||||||||||||||||||    
T  26510752 gcgttgtgttattcgtcatcttgtgcgtcgttgtttgattttgcgt 26510707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 26578263 - 26578336
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||||||||||||| |||||||||||||  ||| ||  ||| |||||   ||| ||||||||||||||||    
T  26578263 tgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatc 26578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 26825411 - 26825491
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||||||| |||||||||||   ||||||||| ||||||| | |||||||||| |  |||| | ||||||||||    
T  26825411 ggcgttgtgttgttcgtcttcttgtgcggc---gtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatc 26825491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 624
Target Start/End: Complemental strand, 27266927 - 27266854
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||||||||  ||||||||||  ||| ||  |||||||||   ||| ||||||||||||||||    
T  27266927 tgttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27266854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 601
Target Start/End: Original strand, 28235601 - 28235646
Alignment:
Q  556 gtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    |||||||||||||||||||||||||||| | | || ||||||||||    
T  28235601 gtcgtcttgtgcggcgttgtttgattttccatcttcttgcggtgtt 28235646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 635
Target Start/End: Complemental strand, 37986229 - 37986129
Alignment:
Q  532 tttgaatgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcaccttta 631  Q
    ||||| || ||||||||| ||||| ||||||||||||||   ||||||||| || | || |||||| ||| | ||| ||| ||||||||||||| ||||     
T  37986229 tttgagtgcggcgttgtgttgttcatcgtcttgtgcggc---gtttgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatcaactttt 37986133  T
Q  632 gtca 635  Q
    ||||    
T  37986132 gtca 37986129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 545 - 624
Target Start/End: Original strand, 38007343 - 38007419
Alignment:
Q  545 ttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||| ||||||||||||||   ||||||||| | ||||| | |||||||||| ||  ||| ||||||||||||    
T  38007343 ttgtgctgttcatcgtcttgtgcggc---gtttgatttcgtgttttgtcgcggtgtttgtttatttcctattgaaagatc 38007419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 38597778 - 38597858
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| ||||||||||||||||||||   ||||||||| |||| || | | |||||||| |  |||| ||||||||||||    
T  38597778 ggcgttgtgttgttcgtcgtcttgtgcggc---gtttgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatc 38597858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 503
Target Start/End: Original strand, 1409413 - 1409449
Alignment:
Q  467 taaataagtgattttcacatataataagttttttctt 503  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  1409413 taaataagtgattttcacatatattaaattttttctt 1409449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 620
Target Start/End: Original strand, 16758521 - 16758597
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    |||||| ||||  ||||| |||||||  || |||||||| ||||||| || ||||||| | ||||||||||||||||    
T  16758521 gttgtgttgtttatcgtcgtgtgcggtcttatttgatttcgcgttttgttacggtgttcgtttggttcatattgaaa 16758597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 583
Target Start/End: Original strand, 42579899 - 42579931
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgatttt 583  Q
    |||||||||||||||||| ||||||||||||||    
T  42579899 tgttcgtcgtcttgtgcgacgttgtttgatttt 42579931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 620
Target Start/End: Original strand, 6014 - 6088
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaa 620  Q
    |||| |||||||||||||||||||||||||||||||| |||| || ||||||||||   ||||||||||||||||    
T  6014 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 601
Target Start/End: Complemental strand, 20464 - 20414
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtt 601  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  20464 tgttcgtcgtcttgtgcgacgttgtttgattttccgttttcttgcggtgtt 20414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 570 - 639
Target Start/End: Complemental strand, 58169 - 58100
Alignment:
Q  570 cgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||| ||||||||||||| || |||||||||||| ||| |||||| |||||||||| ||| |||||||||    
T  58169 cgttttttgattttgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcagcttcagtcaatca 58100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 624
Target Start/End: Original strand, 93086 - 93169
Alignment:
Q  542 gcgttgtgctgttcgtcgtcttgtgcggcgttgtttgat-tttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||||| |||| || |||||||||||||||||||||| || | || || ||| |||||| | ||||||||||||||||||||    
T  93086 gcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttggttcatattgaaagatc 93169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 546 - 624
Target Start/End: Original strand, 453936 - 454014
Alignment:
Q  546 tgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||| |||||||||||||| ||||||||||||||||||  || || ||||||||||   |||  |||||||||||||||    
T  453936 tgtgttgttcgtcgtcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatc 454014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 624
Target Start/End: Original strand, 1326 - 1406
Alignment:
Q  541 ggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||| |||||||||||||||| |||   ||||||||| |||| || |||||||||| | || |||| ||||||||||||    
T  1326 ggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatc 1406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 624
Target Start/End: Original strand, 6314 - 6387
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    ||||||||||||||| |||| |||||||||||  ||| || ||||||||||   ||| ||||||||||||||||    
T  6314 tgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 639
Target Start/End: Complemental strand, 92589 - 92508
Alignment:
Q  558 cgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaatca 639  Q
    |||||||||||  ||||||||||||  ||| || ||| |||||| | |||||||||||||||||||||  |||||| |||||    
T  92589 cgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatca 92508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 544 - 623
Target Start/End: Complemental strand, 36762 - 36683
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagat 623  Q
    |||||| ||||||||||||||||||| ||||||||||||    | || ||| |||| ||  |||||||||||||||||||    
T  36762 gttgtgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagat 36683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 467 - 503
Target Start/End: Complemental strand, 36824 - 36788
Alignment:
Q  467 taaataagtgattttcacatataataagttttttctt 503  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  36824 taaataagtgatttttacatatactaagttttttctt 36788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 551 - 582
Target Start/End: Complemental strand, 361867 - 361836
Alignment:
Q  551 tgttcgtcgtcttgtgcggcgttgtttgattt 582  Q
    ||||||||||||||||||||||||||||||||    
T  361867 tgttcgtcgtcttgtgcggcgttgtttgattt 361836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 602
Target Start/End: Original strand, 36809 - 36870
Alignment:
Q  538 tgtggcgttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgttt 602  Q
    |||||||||||| || | |||||||||||||||   ||||||||| |||||||||| ||||||||    
T  36809 tgtggcgttgtgttggtagtcgtcttgtgcggc---gtttgatttcgcgttttatttcggtgttt 36870  T

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Target: scaffold0095 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 637
Target Start/End: Original strand, 9396 - 9462
Alignment:
Q  571 gttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatcacctttagtcaat 637  Q
    ||||||||||||| |||||||||| |||||| | ||||||  | ||||||||||| ||| |||||||    
T  9396 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaat 9462  T

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Target: scaffold0127 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 624
Target Start/End: Original strand, 15476 - 15554
Alignment:
Q  544 gttgtgctgttcgtcgtcttgtgcggcgttgtttgattttgcgttttattgcggtgtttggttggttcatattgaaagatc 624  Q
    |||||| ||||||||||||||||||||||  |||||||| |||| || | |||||||||| |   ||| ||||||||||||    
T  15476 gttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaagatc 15554  T

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