View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16073_high_10 (Length: 370)
Name: NF16073_high_10
Description: NF16073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16073_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 13 - 356
Target Start/End: Original strand, 25522027 - 25522370
Alignment:
| Q |
13 |
aatattgaccccataactaaagcgcatattattgtaaacaacatccttattgcattgtatgatggatttctccagtataaaatattctgcttccataaac |
112 |
Q |
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| T |
25522027 |
aatattgaccccataactaaagcgcatattattgtaaacaacatccttattgcattgtatgatggatttctccagtataaaatattctgcttccataaac |
25522126 |
T |
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| Q |
113 |
acttgtgaagttgtgagcatgtattttgtgaatataatgtgtcaaacttcaacggttgtgagtcgggagatggttcttcatattttctaatcgaagcttc |
212 |
Q |
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| T |
25522127 |
acttgtgaagttgtgagcatgtattttgtgaatataatgtgtcaaacttcaacggttctgagccgggagatggttcttcatattttctaatcgaagcttc |
25522226 |
T |
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| Q |
213 |
caccgttctaagataaaaggatgtgatatagccattaatctcatattattaattcagtacataaggttttaacttgttgattcgtacgttccttagaaaa |
312 |
Q |
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| T |
25522227 |
caccgttctaagataaaaggatgtgatatagccattaatatcatattattaattctgtacataaggttgtaacttgttgattcgtacgttccttagaaaa |
25522326 |
T |
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| Q |
313 |
gatatcttttattgtcattaggactcgtgagaatagataaagtt |
356 |
Q |
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| T |
25522327 |
gacatcttttattgttattaggactcgtgagaatagataaagtt |
25522370 |
T |
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