View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16073_high_9 (Length: 372)

Name: NF16073_high_9
Description: NF16073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16073_high_9
NF16073_high_9
[»] chr7 (40 HSPs)
chr7 (11-173)||(7695540-7695702)
chr7 (285-372)||(7695449-7695536)
chr7 (238-343)||(18044202-18044307)
chr7 (238-343)||(22119983-22120088)
chr7 (238-343)||(40542911-40543016)
chr7 (238-344)||(17196951-17197057)
chr7 (238-343)||(2751366-2751471)
chr7 (238-343)||(7275372-7275477)
chr7 (238-343)||(21835246-21835351)
chr7 (238-343)||(22703581-22703686)
chr7 (238-343)||(23012509-23012614)
chr7 (238-343)||(23092191-23092296)
chr7 (238-326)||(42913514-42913602)
chr7 (238-343)||(3851852-3851957)
chr7 (238-343)||(11997944-11998049)
chr7 (238-343)||(29861765-29861870)
chr7 (238-341)||(31197687-31197790)
chr7 (238-343)||(27009454-27009560)
chr7 (238-340)||(27312250-27312352)
chr7 (238-343)||(654706-654810)
chr7 (238-343)||(7175863-7175968)
chr7 (238-343)||(10091283-10091387)
chr7 (238-343)||(21217834-21217939)
chr7 (238-343)||(28950966-28951071)
chr7 (238-343)||(19421326-19421431)
chr7 (238-343)||(36772304-36772409)
chr7 (238-343)||(41907515-41907619)
chr7 (275-343)||(2103150-2103218)
chr7 (272-343)||(9683921-9683992)
chr7 (238-325)||(16374107-16374194)
chr7 (276-343)||(21373805-21373872)
chr7 (238-341)||(31712903-31713006)
chr7 (238-328)||(32849701-32849791)
chr7 (238-343)||(2344394-2344499)
chr7 (241-342)||(43785303-43785404)
chr7 (272-343)||(9718022-9718093)
chr7 (238-328)||(22638398-22638488)
chr7 (238-343)||(31274009-31274113)
chr7 (263-343)||(17212148-17212228)
chr7 (272-328)||(39145687-39145742)
[»] chr3 (47 HSPs)
chr3 (238-343)||(10083820-10083925)
chr3 (238-343)||(10190743-10190848)
chr3 (238-343)||(49258263-49258368)
chr3 (238-343)||(8097280-8097385)
chr3 (238-343)||(15566501-15566605)
chr3 (238-343)||(40133450-40133555)
chr3 (238-344)||(52821637-52821742)
chr3 (238-343)||(8456151-8456256)
chr3 (238-343)||(25379852-25379957)
chr3 (238-343)||(32151515-32151620)
chr3 (238-343)||(35493002-35493107)
chr3 (238-343)||(45529756-45529860)
chr3 (238-343)||(46576439-46576544)
chr3 (238-343)||(53233912-53234016)
chr3 (238-342)||(18176888-18176992)
chr3 (238-341)||(26174206-26174309)
chr3 (238-340)||(24165716-24165817)
chr3 (238-328)||(52455650-52455740)
chr3 (238-343)||(21363034-21363139)
chr3 (238-343)||(25289716-25289820)
chr3 (238-343)||(34492576-34492681)
chr3 (238-343)||(39041853-39041958)
chr3 (238-343)||(45272417-45272522)
chr3 (238-343)||(53424178-53424282)
chr3 (242-342)||(30257716-30257816)
chr3 (263-343)||(51532880-51532960)
chr3 (238-341)||(48977481-48977584)
chr3 (269-343)||(7470248-7470321)
chr3 (272-342)||(40940917-40940987)
chr3 (238-326)||(48104985-48105073)
chr3 (238-325)||(24407370-24407457)
chr3 (238-343)||(8958036-8958142)
chr3 (238-343)||(30807154-30807259)
chr3 (238-343)||(4462724-4462828)
chr3 (242-335)||(33398473-33398566)
chr3 (238-335)||(54475780-54475877)
chr3 (272-343)||(2511332-2511403)
chr3 (293-343)||(26108383-26108433)
chr3 (238-300)||(50731238-50731300)
chr3 (238-300)||(50781554-50781616)
chr3 (238-343)||(31537839-31537944)
chr3 (238-303)||(53848435-53848500)
chr3 (238-298)||(4048086-4048146)
chr3 (263-303)||(4252422-4252462)
chr3 (263-343)||(14343315-14343394)
chr3 (238-342)||(25344059-25344162)
chr3 (238-342)||(53288714-53288817)
[»] chr8 (30 HSPs)
chr8 (238-343)||(34237656-34237761)
chr8 (238-343)||(4718740-4718845)
chr8 (238-343)||(32879374-32879479)
chr8 (238-343)||(42328099-42328204)
chr8 (238-341)||(28193571-28193674)
chr8 (238-343)||(8765527-8765632)
chr8 (238-335)||(21603333-21603430)
chr8 (238-343)||(2618281-2618386)
chr8 (238-343)||(3734624-3734729)
chr8 (238-343)||(39349351-39349456)
chr8 (238-325)||(2639412-2639499)
chr8 (238-343)||(20306003-20306108)
chr8 (238-343)||(21092636-21092741)
chr8 (238-343)||(42643119-42643224)
chr8 (238-343)||(15259407-15259512)
chr8 (278-343)||(24999329-24999394)
chr8 (238-326)||(4698724-4698812)
chr8 (238-325)||(10292167-10292254)
chr8 (238-325)||(18128626-18128713)
chr8 (238-344)||(19471703-19471810)
chr8 (238-344)||(19542627-19542734)
chr8 (238-344)||(19589962-19590069)
chr8 (273-343)||(24018477-24018548)
chr8 (246-341)||(28088383-28088478)
chr8 (238-343)||(2166792-2166896)
chr8 (238-343)||(6953009-6953113)
chr8 (238-343)||(20470012-20470116)
chr8 (238-336)||(25248450-25248546)
chr8 (238-343)||(14633049-14633154)
chr8 (307-343)||(21667645-21667681)
[»] chr5 (37 HSPs)
chr5 (238-343)||(8484662-8484767)
chr5 (238-343)||(7085627-7085732)
chr5 (238-343)||(27498732-27498837)
chr5 (238-343)||(15641107-15641211)
chr5 (238-343)||(19456212-19456316)
chr5 (238-343)||(30485919-30486024)
chr5 (238-343)||(18207298-18207403)
chr5 (238-343)||(32059441-32059546)
chr5 (238-343)||(34310233-34310338)
chr5 (242-343)||(38684299-38684399)
chr5 (238-326)||(22392796-22392884)
chr5 (238-343)||(11926502-11926608)
chr5 (238-343)||(4603868-4603973)
chr5 (238-343)||(21236363-21236468)
chr5 (238-343)||(34049902-34050007)
chr5 (242-343)||(35425104-35425205)
chr5 (238-328)||(41351105-41351194)
chr5 (238-343)||(9659312-9659417)
chr5 (242-343)||(11464913-11465013)
chr5 (238-315)||(22693054-22693131)
chr5 (272-341)||(31287981-31288050)
chr5 (238-323)||(33709504-33709589)
chr5 (275-342)||(5049229-5049295)
chr5 (238-341)||(6014281-6014384)
chr5 (272-343)||(23270557-23270628)
chr5 (238-342)||(27487555-27487660)
chr5 (45-122)||(4820912-4820990)
chr5 (238-342)||(12398449-12398553)
chr5 (259-343)||(15971144-15971228)
chr5 (272-343)||(13108485-13108555)
chr5 (238-341)||(28614487-28614589)
chr5 (277-343)||(10399864-10399930)
chr5 (238-328)||(10869566-10869656)
chr5 (238-328)||(12317156-12317245)
chr5 (238-341)||(15485292-15485396)
chr5 (263-315)||(16247027-16247079)
chr5 (238-290)||(37495198-37495250)
[»] chr1 (31 HSPs)
chr1 (238-343)||(4621238-4621343)
chr1 (238-343)||(15059403-15059508)
chr1 (238-343)||(24122114-24122219)
chr1 (241-343)||(1378989-1379090)
chr1 (238-343)||(7766728-7766833)
chr1 (242-343)||(24674484-24674585)
chr1 (245-343)||(8779744-8779842)
chr1 (238-343)||(7578500-7578605)
chr1 (238-343)||(17935860-17935965)
chr1 (242-343)||(32930840-32930941)
chr1 (238-335)||(34778438-34778535)
chr1 (239-343)||(8077738-8077841)
chr1 (238-334)||(26513149-26513244)
chr1 (272-335)||(12876971-12877034)
chr1 (273-343)||(8254788-8254858)
chr1 (238-343)||(45331622-45331728)
chr1 (238-343)||(2272435-2272540)
chr1 (238-343)||(9500356-9500461)
chr1 (263-343)||(30677267-30677347)
chr1 (273-340)||(32729638-32729705)
chr1 (238-328)||(22909977-22910067)
chr1 (238-343)||(168292-168397)
chr1 (238-342)||(18533725-18533829)
chr1 (238-343)||(23734207-23734313)
chr1 (238-343)||(23741399-23741505)
chr1 (238-303)||(27159216-27159281)
chr1 (238-323)||(37351454-37351538)
chr1 (242-343)||(45859048-45859149)
chr1 (238-326)||(7197248-7197336)
chr1 (273-325)||(37047101-37047153)
chr1 (263-343)||(46607901-46607981)
[»] chr6 (22 HSPs)
chr6 (238-343)||(654147-654252)
chr6 (238-343)||(1345026-1345131)
chr6 (238-343)||(9690639-9690744)
chr6 (238-343)||(3222637-3222741)
chr6 (238-343)||(5360072-5360177)
chr6 (238-343)||(15360099-15360204)
chr6 (238-343)||(34147437-34147542)
chr6 (238-343)||(34160053-34160158)
chr6 (238-343)||(11448962-11449067)
chr6 (238-343)||(21148512-21148616)
chr6 (238-343)||(21982322-21982426)
chr6 (238-341)||(11840994-11841096)
chr6 (238-343)||(11007256-11007361)
chr6 (258-343)||(12390516-12390601)
chr6 (238-341)||(9239068-9239171)
chr6 (272-343)||(17081089-17081160)
chr6 (238-341)||(9844031-9844134)
chr6 (238-336)||(15730496-15730594)
chr6 (272-326)||(17149491-17149545)
chr6 (238-343)||(28672158-28672263)
chr6 (238-316)||(14213000-14213078)
chr6 (238-326)||(9208360-9208448)
[»] chr4 (37 HSPs)
chr4 (238-343)||(34844759-34844864)
chr4 (238-343)||(40058853-40058958)
chr4 (238-343)||(52983710-52983815)
chr4 (238-343)||(5609203-5609308)
chr4 (238-343)||(32986288-32986393)
chr4 (238-343)||(32990526-32990631)
chr4 (238-343)||(34723890-34723995)
chr4 (238-343)||(45787705-45787810)
chr4 (238-343)||(27528796-27528901)
chr4 (238-343)||(46714484-46714589)
chr4 (238-342)||(36131511-36131615)
chr4 (238-341)||(19660533-19660636)
chr4 (238-340)||(20566444-20566546)
chr4 (242-343)||(35229258-35229360)
chr4 (238-343)||(33696280-33696385)
chr4 (238-343)||(44343605-44343710)
chr4 (239-343)||(20077986-20078090)
chr4 (263-343)||(54127368-54127448)
chr4 (272-343)||(32942461-32942532)
chr4 (238-343)||(21387488-21387591)
chr4 (238-343)||(18875518-18875622)
chr4 (238-343)||(27574409-27574514)
chr4 (278-343)||(55961795-55961859)
chr4 (272-343)||(13550299-13550370)
chr4 (293-343)||(35674797-35674847)
chr4 (242-323)||(51535731-51535813)
chr4 (246-343)||(9517650-9517747)
chr4 (238-298)||(23639760-23639820)
chr4 (238-298)||(23645418-23645478)
chr4 (263-341)||(8158355-8158434)
chr4 (272-343)||(13584289-13584360)
chr4 (273-323)||(22625097-22625147)
chr4 (269-335)||(30879198-30879263)
chr4 (293-343)||(33992717-33992767)
chr4 (272-316)||(10143779-10143822)
chr4 (45-122)||(34371920-34371998)
chr4 (238-326)||(51595130-51595218)
[»] chr2 (29 HSPs)
chr2 (238-342)||(28668965-28669069)
chr2 (238-343)||(15038050-15038155)
chr2 (238-343)||(35171891-35171996)
chr2 (238-341)||(11941211-11941314)
chr2 (238-343)||(44946054-44946159)
chr2 (246-341)||(4769259-4769354)
chr2 (238-343)||(30466831-30466936)
chr2 (238-327)||(31778138-31778227)
chr2 (238-343)||(33827574-33827679)
chr2 (238-343)||(41314083-41314187)
chr2 (272-328)||(36242347-36242403)
chr2 (238-335)||(2140487-2140585)
chr2 (238-343)||(24196095-24196198)
chr2 (238-328)||(41329948-41330038)
chr2 (238-343)||(3943831-3943936)
chr2 (238-343)||(43374331-43374431)
chr2 (272-343)||(1191604-1191675)
chr2 (275-342)||(36390606-36390673)
chr2 (238-343)||(714126-714231)
chr2 (238-343)||(17324857-17324960)
chr2 (238-343)||(34516415-34516519)
chr2 (238-342)||(13266582-13266685)
chr2 (280-335)||(4567480-4567535)
chr2 (238-323)||(25293269-25293355)
chr2 (238-303)||(18692091-18692156)
chr2 (275-343)||(44976191-44976260)
chr2 (45-88)||(16426880-16426926)
chr2 (263-338)||(18708572-18708648)
chr2 (238-314)||(44929847-44929923)
[»] scaffold0576 (1 HSPs)
scaffold0576 (238-343)||(5083-5188)
[»] scaffold0459 (1 HSPs)
scaffold0459 (238-343)||(10696-10799)
[»] scaffold0623 (1 HSPs)
scaffold0623 (238-343)||(1058-1162)
[»] scaffold0366 (2 HSPs)
scaffold0366 (238-343)||(9301-9405)
scaffold0366 (259-343)||(12023-12106)
[»] scaffold0217 (1 HSPs)
scaffold0217 (238-343)||(7310-7415)
[»] scaffold0070 (1 HSPs)
scaffold0070 (238-343)||(40416-40520)
[»] scaffold1175 (1 HSPs)
scaffold1175 (263-343)||(2452-2532)
[»] scaffold0019 (1 HSPs)
scaffold0019 (238-343)||(161900-162005)
[»] scaffold0328 (1 HSPs)
scaffold0328 (238-316)||(13048-13126)
[»] scaffold0102 (1 HSPs)
scaffold0102 (238-335)||(39191-39288)
[»] scaffold0049 (1 HSPs)
scaffold0049 (238-327)||(66861-66950)
[»] scaffold0016 (1 HSPs)
scaffold0016 (238-343)||(32379-32483)
[»] scaffold0026 (1 HSPs)
scaffold0026 (276-343)||(97405-97472)
[»] scaffold0068 (1 HSPs)
scaffold0068 (238-343)||(41646-41750)
[»] scaffold0051 (1 HSPs)
scaffold0051 (238-335)||(52872-52969)
[»] scaffold0015 (1 HSPs)
scaffold0015 (269-304)||(72558-72593)
[»] scaffold0199 (1 HSPs)
scaffold0199 (238-290)||(8452-8504)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 8e-80; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 7695702 - 7695540
Alignment:
Q  11 gaacttcgaaattgaaagaaatgataaatatttgcagacaattttttatgaagaagtgcttccacatcaaacaataattaataggttatcttgatcaaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  7695702 gaacttcgaaattgaaagaaatgataaatatttgcagacaattttttatgaagaagtgcttccatttcaaacaataattaataggttatcttggtcaaat 7695603  T
Q  111 agaggcaaatgttattatgagagaagaaaaatagaatgaacaatgtaattctcatttattgta 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7695602 agaggcaaatgttattatgagagaagaaaaatagaatgaacaatgtaattctcatttattgta 7695540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 372
Target Start/End: Complemental strand, 7695536 - 7695449
Alignment:
Q  285 ccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagctaactgtacgtgatcttattgcataggat 372  Q
    |||||||||| ||||||||  |  |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7695536 ccaccgttcatttgtgggggtcttgtttaaagtcagagcaagctttgtatgaacttagctaactgtacatgatcttattgcataggat 7695449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 18044307 - 18044202
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| ||||||||||||||| |||||   ||||||||||| |||||||||||| ||||||||||| |||||| |    
T  18044307 aaactcggtatccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagcaagctctgtatgga 18044208  T
Q  338 cttagc 343  Q
    ||||||    
T  18044207 cttagc 18044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 22120088 - 22119983
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  22120088 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 22119989  T
Q  338 cttagc 343  Q
    ||||||    
T  22119988 cttagc 22119983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 40542911 - 40543016
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  40542911 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 40543010  T
Q  338 cttagc 343  Q
    ||||||    
T  40543011 cttagc 40543016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 17196951 - 17197057
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  17196951 aaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 17197050  T
Q  338 cttagct 344  Q
    |||||||    
T  17197051 cttagct 17197057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 2751471 - 2751366
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  || ||| |||| |||||||||||| ||||||||||| |||||| |    
T  2751471 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatgga 2751372  T
Q  338 cttagc 343  Q
    ||||||    
T  2751371 cttagc 2751366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 7275477 - 7275372
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| ||| |||||||| ||||||||||| |||||| |    
T  7275477 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatgga 7275378  T
Q  338 cttagc 343  Q
    ||||||    
T  7275377 cttagc 7275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 21835351 - 21835246
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  21835351 aaactcgatatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 21835252  T
Q  338 cttagc 343  Q
    ||||||    
T  21835251 cttagc 21835246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 22703686 - 22703581
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||  ||||||||||| |||||||||||||||||| |    
T  22703686 aaactgggtatccgatcaaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctttgtatgga 22703587  T
Q  338 cttagc 343  Q
    ||||||    
T  22703586 cttagc 22703581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 23012509 - 23012614
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | |  ||||||||| |  |||||||||||||||||||  ||||||||||| |||| ||||||| ||||||||||| |||||| |    
T  23012509 aaactcggtatccgatcaatgaattgactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagccagagcaagctctgtatgga 23012608  T
Q  338 cttagc 343  Q
    ||||||    
T  23012609 cttagc 23012614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 23092296 - 23092191
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | |  ||| ||||| || |||||||||||||||||||| || ||| |||| |||||||||||| ||||||||||| |||||| |    
T  23092296 aaactcggtatccgatccatgaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggccccgtttaaagccagagcaagctctgtatgga 23092197  T
Q  338 cttagc 343  Q
    ||||||    
T  23092196 cttagc 23092191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 42913514 - 42913602
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaag 326  Q
    ||||||||||||||| |||| |||  |||| || |||||||||||||||||||| |||||| |||| |||||||||||| |||||||||    
T  42913514 aaactcggtatccgatctaagaatcaactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaag 42913602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 3851957 - 3851852
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||| |||||||||||  |||||| |||| |||||||||||| ||||||||||| | |||| |    
T  3851957 aaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctatatgga 3851858  T
Q  338 cttagc 343  Q
    ||||||    
T  3851857 cttagc 3851852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 11998049 - 11997944
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  |||||||||||||||||||  |||||| |||| ||| |||||||| ||||||||||| |||||| |    
T  11998049 aaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagcaagctatgtatgga 11997950  T
Q  338 cttagc 343  Q
    ||||||    
T  11997949 cttagc 11997944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 29861870 - 29861765
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| |||| ||| ||||| |  ||||||| |||||||||||  |||||| |||| |||||||||||| ||||||||| | |||||| |    
T  29861870 aaactcggtatccgatctaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctgtatgga 29861771  T
Q  338 cttagc 343  Q
    ||||||    
T  29861770 cttagc 29861765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 31197790 - 31197687
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||| ||||| ||||||||||||||||||||||  |||||| |||| ||||||||||||  |||||||| | |||||| |    
T  31197790 aaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccaccgaccacttgcgggggccccgtttaaagcaagagcaagatctgtatgga 31197691  T
Q  338 ctta 341  Q
    ||||    
T  31197690 ctta 31197687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 27009560 - 27009454
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcac-ttgtggggaccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||||||||||| | | || ||| ||||| | ||||||||||||||||||||| ||| |||  ||| |||||||||||| ||||||||||| ||||||     
T  27009560 aaactcggtatccaatccaagaatcgactaatttgaggggaccaatcccaccgtccactttgcaggggccccgtttaaagtcagagcaagctctgtatgg 27009461  T
Q  337 acttagc 343  Q
    |||||||    
T  27009460 acttagc 27009454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 340
Target Start/End: Complemental strand, 27312352 - 27312250
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| ||||||||||||||||||||||  |||||| |||| | |||||||||| |||||  |||| |||||| |    
T  27312352 aaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagtcagaggtagctctgtatgga 27312253  T
Q  338 ctt 340  Q
    |||    
T  27312252 ctt 27312250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 654706 - 654810
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||  ||||| || |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |    
T  654706 aaactcggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggg-gcccgtttaaagccagagcaagctctgtatgga 654804  T
Q  338 cttagc 343  Q
    ||||||    
T  654805 cttagc 654810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 7175863 - 7175968
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||| |||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||  || |||||||| ||||||||||| |||||| |    
T  7175863 aaactcagtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaagctctgtatgga 7175962  T
Q  338 cttagc 343  Q
    ||||||    
T  7175963 cttagc 7175968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 10091387 - 10091283
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||| || | || ||| ||||| || ||||||| |||||||||||  |||||| ||||||||| ||||||| ||||||||||| |||||| |    
T  10091387 aaactcggtatcggatc-aagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctctgtatgga 10091289  T
Q  338 cttagc 343  Q
    ||||||    
T  10091288 cttagc 10091283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 21217834 - 21217939
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || |||  |||| || ||||||| |||||||||||  |||||||||||  |||||||||||  |||||||||| |||||| |    
T  21217834 aaactcggtatccgatccaagaatcaactaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagctagagcaagctctgtatgga 21217933  T
Q  338 cttagc 343  Q
    ||||||    
T  21217934 cttagc 21217939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 28951071 - 28950966
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||||| |||||  |||||||||||||||||||   ||||| | ||  ||||||||||| ||||||||||| | ||||||    
T  28951071 aaactcggtatccgatccaagaattgtctagttcgaggggaccaatcccaccgccgacttgcgagggacccgtttaaagccagagcaagctctatatgaa 28950972  T
Q  338 cttagc 343  Q
    ||||||    
T  28950971 cttagc 28950966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 19421431 - 19421326
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||| ||   || ||| ||||| || |||| ||||||||||||||  ||||||||||  |||| ||||||| ||||||||||| |||||| |    
T  19421431 aaactcggtatctgattcaagaatcgactaatccgaggagaccaatcccaccgcccacttgtgggcgccccatttaaagtcagagcaagctctgtatgga 19421332  T
Q  338 cttagc 343  Q
    ||||||    
T  19421331 cttagc 19421326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 36772304 - 36772409
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||| |||| ||| ||||||  ||||   |||| |||||||||||| ||||||||||| ||||||||    
T  36772304 aaactcggtatccgatcaaagaatcgactaatccgagaggactaattccaccgcccactcccgggggccccgtttaaagccagagcaagctctgtatgaa 36772403  T
Q  338 cttagc 343  Q
    ||||||    
T  36772404 cttagc 36772409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 41907515 - 41907619
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |||| ||||||||||||||||   |||||| |||| || ||||||||| |||||||| || |||||| |    
T  41907515 aaactcggtatccgatccaagaatcgactaatctg-ggggaccaatcccaccacccacttgcgggggccacgtttaaagccagagcaacctctgtatgga 41907613  T
Q  338 cttagc 343  Q
    ||||||    
T  41907614 cttagc 41907619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 2103218 - 2103150
Alignment:
Q  275 gggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||||||||||||  |||||| |||| |||| ||||||| ||||||||||| |||||| |||||||    
T  2103218 gggaccaatcccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagc 2103150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 9683992 - 9683921
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||| ||||| |||||  ||||| |||||||    
T  9683992 gaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcggtatggacttagc 9683921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 16374194 - 16374107
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaa 325  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||| || ||| ||||  ||||||||||| || |||||    
T  16374194 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggtcccgtttaaagccatagcaa 16374107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 21373872 - 21373805
Alignment:
Q  276 ggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||||| |||||| |||||| |||| |||||||||||| ||||||||||| |||||  |||||||    
T  21373872 ggaccaatctcaccgtccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagc 21373805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 31712903 - 31713006
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| | ||  |||| |||||| ||||| |||| ||||||| |    
T  31712903 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgagggtcccgcttaaagccagagtaagcgttgtatgga 31713002  T
Q  338 ctta 341  Q
    ||||    
T  31713003 ctta 31713006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 32849791 - 32849701
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    ||||||||||||||| | || ||| ||||| |||||||||||||||||||| |  ||||| ||||   ||| ||||||| |||||||||||    
T  32849791 aaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccactgcccacttatgggagtcccatttaaagccagagcaagct 32849701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 2344499 - 2344394
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | ||  |  ||||| || ||||||||||||||||||| ||||||| ||||  ||||||||||| || |  ||||| |||||| |    
T  2344499 aaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagccaaaaaaagctctgtatgga 2344400  T
Q  338 cttagc 343  Q
    ||||||    
T  2344399 cttagc 2344394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 43785303 - 43785404
Alignment:
Q  241 ctcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactt 340  Q
    |||||||||||| | || ||| ||||| ||  |||||||||||| |||||| |||||| || | |||||||||||  ||||| ||||| |||||| ||||    
T  43785303 ctcggtatccgatccaaaaatcgactaatccaaggggaccaatctcaccgtccacttgcggaggccccgtttaaaaccagagtaagctctgtatggactt 43785402  T
Q  341 ag 342  Q
    ||    
T  43785403 ag 43785404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 9718022 - 9718093
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||| ||||||| |||||| ||| ||||| || |||||||||||| ||||||||||| | |||| |||||||    
T  9718022 gaggagaccaattccaccgctcatttgtgagggccccgtttaaagccagagcaagctctctatggacttagc 9718093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 22638488 - 22638398
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    ||||||||||||||| | || ||| ||||| |  |||| || |||||||||||  |||||| || | |||||||||||| |||||||||||    
T  22638488 aaactcggtatccgatccaagaatcgactaattcgaggagatcaatcccaccgcccacttgcggaggccccgtttaaagccagagcaagct 22638398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 31274113 - 31274009
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||  | || ||| ||||| |  ||||||||||||| ||| |  |||||| || | |||||||||||| ||||||||||| |||||| |    
T  31274113 aaactcggtatccggtccaagaatcgactaattcgaggggaccaatctcactgcccacttgcggag-ccccgtttaaagccagagcaagctctgtatgga 31274015  T
Q  338 cttagc 343  Q
    ||||||    
T  31274014 cttagc 31274009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 17212228 - 17212148
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||| || ||||||||||||||||||  |||||||  |||  ||||||| ||| |||||||| || |||||| |||||||    
T  17212228 gactaatccgaggggaccaatcccaccactcacttgcaggggtcccgttttaagccagagcaatctctgtatggacttagc 17212148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 39145687 - 39145742
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    |||||||||||||||||||| ||||||  |||  ||||||||||| |||||||||||    
T  39145687 gaggggaccaatcccaccgtccacttgcaggg-gcccgtttaaagccagagcaagct 39145742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 10083820 - 10083925
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||| |    
T  10083820 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagcaagctctgtatgga 10083919  T
Q  338 cttagc 343  Q
    ||||||    
T  10083920 cttagc 10083925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 10190743 - 10190848
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  10190743 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 10190842  T
Q  338 cttagc 343  Q
    ||||||    
T  10190843 cttagc 10190848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 49258263 - 49258368
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  ||||||||||| |||||||||||| ||||||||||| |||||| |    
T  49258263 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaagctctgtatgga 49258362  T
Q  338 cttagc 343  Q
    ||||||    
T  49258363 cttagc 49258368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 8097280 - 8097385
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||| ||| |||||| |    
T  8097280 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcatgctctgtatgga 8097379  T
Q  338 cttagc 343  Q
    ||||||    
T  8097380 cttagc 8097385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 15566501 - 15566605
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| ||||||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |    
T  15566501 aaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggg-gcccgtttaaagccagagcaagctctgtatgga 15566599  T
Q  338 cttagc 343  Q
    ||||||    
T  15566600 cttagc 15566605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 40133450 - 40133555
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  40133450 aaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 40133549  T
Q  338 cttagc 343  Q
    ||||||    
T  40133550 cttagc 40133555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 52821637 - 52821742
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||  |||| |||||||||||| ||||||||||| |||||| |    
T  52821637 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttacgggg-ccccgtttaaagccagagcaagctctgtatgga 52821735  T
Q  338 cttagct 344  Q
    |||||||    
T  52821736 cttagct 52821742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 8456151 - 8456256
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||||||   || ||| ||||| || ||||||||||||||||| |  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  8456151 aaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 8456250  T
Q  338 cttagc 343  Q
    ||||||    
T  8456251 cttagc 8456256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 25379957 - 25379852
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||| |||||||| | || ||| ||||| || |||||||||||||||||||  | |||| |||| |||||||||||| ||||||||||| |||||| |    
T  25379957 aaactcagtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccgcttgcgggggccccgtttaaagccagagcaagctctgtatgga 25379858  T
Q  338 cttagc 343  Q
    ||||||    
T  25379857 cttagc 25379852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 32151620 - 32151515
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  ||||||||||||| |||||  |||||| |||| |||||||||||| ||||||||||| |||||||     
T  32151620 aaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgag 32151521  T
Q  338 cttagc 343  Q
    ||||||    
T  32151520 cttagc 32151515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 35493107 - 35493002
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||| | | | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  35493107 aaactcggtattcaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 35493008  T
Q  338 cttagc 343  Q
    ||||||    
T  35493007 cttagc 35493002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 45529756 - 45529860
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |    
T  45529756 aaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatgga 45529854  T
Q  338 cttagc 343  Q
    ||||||    
T  45529855 cttagc 45529860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 46576544 - 46576439
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| ||  ||||||||||||| ||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  46576544 aaactcggtatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 46576445  T
Q  338 cttagc 343  Q
    ||||||    
T  46576444 cttagc 46576439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 53233912 - 53234016
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| ||||||||| || ||||||||||| |||||| |    
T  53233912 aaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagcaagctctgtatgga 53234010  T
Q  338 cttagc 343  Q
    ||||||    
T  53234011 cttagc 53234016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 18176888 - 18176992
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||| |||||||| | || ||| ||||| || || ||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  18176888 aaactctgtatccgatccaagaatcgactaatccgatgggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 18176987  T
Q  338 cttag 342  Q
    |||||    
T  18176988 cttag 18176992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 26174309 - 26174206
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||  ||||||| ||||||||||| |||||| |    
T  26174309 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagcaagctctgtatgga 26174210  T
Q  338 ctta 341  Q
    ||||    
T  26174209 ctta 26174206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 340
Target Start/End: Original strand, 24165716 - 24165817
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||| |||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  24165716 aaactcggtatccgatccaagaatcgactaatccgaggggaacaatcccaccgcccacttgcgggg-ccccgtttaaagccagagcaagctctgtatgga 24165814  T
Q  338 ctt 340  Q
    |||    
T  24165815 ctt 24165817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 52455650 - 52455740
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    ||||||||||||| | | || ||| ||||| || ||||||||||||||||||  ||||||| |||| |||||||||||| |||||||||||    
T  52455650 aaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccagtcacttgcgggggccccgtttaaagtcagagcaagct 52455740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 21363139 - 21363034
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| || || || ||||| |||||||||||||  |||||| |||| | |||||||||| ||||||||||| |||||| |    
T  21363139 aaactcggtatccgatccaagaatcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctgtatgga 21363040  T
Q  338 cttagc 343  Q
    ||||||    
T  21363039 cttagc 21363034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 25289716 - 25289820
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  ||||| |||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  25289716 aaactcggtatccgatccaagaatcgactaattcgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 25289814  T
Q  338 cttagc 343  Q
    ||||||    
T  25289815 cttagc 25289820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 34492576 - 34492681
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||| || | || |||  |||| |||||  |||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  34492576 aaactcggtatcagatccaagaatcaactaatctgaatggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 34492675  T
Q  338 cttagc 343  Q
    ||||||    
T  34492676 cttagc 34492681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 39041853 - 39041958
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||| ||||||||||||||   |||||| |||| |||||||||||| ||||||||||| || ||| |    
T  39041853 aaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctctgcatgga 39041952  T
Q  338 cttagc 343  Q
    ||||||    
T  39041953 cttagc 39041958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 45272417 - 45272522
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || | |  |||| || |||||||||||||||||||  |||||| |||| |||||||||||| |||||||||||  ||||| |    
T  45272417 aaactcggtatccgatccaagagtcaactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctccgtatgga 45272516  T
Q  338 cttagc 343  Q
    ||||||    
T  45272517 cttagc 45272522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 53424178 - 53424282
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||||||||||||||| ||||||| ||||  ||||||||||| || ||||| || |||||| |    
T  53424178 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggg-gcccgtttaaagccatagcaaactctgtatgga 53424276  T
Q  338 cttagc 343  Q
    ||||||    
T  53424277 cttagc 53424282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 342
Target Start/End: Complemental strand, 30257816 - 30257716
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||||||| | || ||| ||||| || |||||||||||| ||||||  |||||| |||| |||| ||||||| ||||||||||| |||||| |||||    
T  30257816 tcggtatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggactta 30257717  T
Q  342 g 342  Q
    |    
T  30257716 g 30257716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 51532960 - 51532880
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||| ||||||||||||||||||||||| |||||| ||||  ||| |||||||  |||||||||| |||||| |||||||    
T  51532960 gactaatctgaggggaccaatcccaccgtccacttgcgggggtcccatttaaagttagagcaagctctgtatggacttagc 51532880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 48977584 - 48977481
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | ||  |  ||||| || |||||||||||||||||||  ||||||  ||| |||||||||||| ||||||||||| |||||| |    
T  48977584 aaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagcaagctctgtatgga 48977485  T
Q  338 ctta 341  Q
    ||||    
T  48977484 ctta 48977481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 343
Target Start/End: Original strand, 7470248 - 7470321
Alignment:
Q  269 tctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||||||||||| |  ||||||  ||| |||||||||||| ||||||||||| ||||||||||||||    
T  7470248 tctgaggggaccaatcccactgcccacttgcaggg-ccccgtttaaagccagagcaagctctgtatgaacttagc 7470321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 342
Target Start/End: Complemental strand, 40940987 - 40940917
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttag 342  Q
    |||||||||||||| |||   ||||||||||| |||||||||||| ||||||||||| |||||| ||||||    
T  40940987 gaggggaccaatcctaccacccacttgtgggggccccgtttaaagtcagagcaagctctgtatggacttag 40940917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 48105073 - 48104985
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaag 326  Q
    ||||||||||||||| | || ||| ||||| || || |||||||||| |||||  ||||||||||| ||| |||||||| |||||||||    
T  48105073 aaactcggtatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgtgggggccctgtttaaagccagagcaag 48104985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 24407457 - 24407370
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaa 325  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |  | |||||||||||| ||||||||    
T  24407457 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgatggccccgtttaaagtcagagcaa 24407370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 8958036 - 8958142
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggacccc-gtttaaaggcagagcaagctttgtatga 336  Q
    |||||||||||| || | || ||| || || || |||||||||||||||||||  |||||| |||| ||||  |||||||  |||||||||||||||||     
T  8958036 aaactcggtatctgatccaagaatcgattaatcagaggggaccaatcccaccgcccacttgcgggggccccattttaaagctagagcaagctttgtatgg 8958135  T
Q  337 acttagc 343  Q
    |||||||    
T  8958136 acttagc 8958142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 30807154 - 30807259
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggga-ccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||||||||||||| | || ||| ||||| || ||||| |||||||| ||||  |||||| ||||  |||||||||||| ||||||||||| ||||||     
T  30807154 aaactcggtatccgatccaagaatcgactaatccgaggg-accaatcctaccgcccacttgcggggggccccgtttaaagccagagcaagctctgtatgg 30807252  T
Q  337 acttagc 343  Q
    |||||||    
T  30807253 acttagc 30807259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 4462828 - 4462724
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||| | | || |||  |||| || ||| ||| |||||||||||| |||||| |||| ||||||||||||  |||| ||||| ||||||||    
T  4462828 aaactcggtatccaatccaagaataaactaatccgagtggatcaatcccaccgtccacttgcgggg-ccccgtttaaagctagagtaagctctgtatgaa 4462730  T
Q  338 cttagc 343  Q
    ||||||    
T  4462729 cttagc 4462724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 335
Target Start/End: Original strand, 33398473 - 33398566
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    ||||||||||| | || ||| ||||| |  ||||| |||||||||||||  |||||| |||| ||||||||||||  |||||||||| ||||||    
T  33398473 tcggtatccgatccaagaatcgactaattcgagggaaccaatcccaccgcccacttgcgggggccccgtttaaagctagagcaagctctgtatg 33398566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 54475877 - 54475780
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    |||||||||||| || | || ||| ||||| ||  ||||||||||||||||||  |||||| || | |||||||||||| || |||||||| ||||||    
T  54475877 aaactcggtatctgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcggtggccccgtttaaagccaaagcaagctctgtatg 54475780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 2511332 - 2511403
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||| ||||||||||||||  |||||| || |  ||||||||||| |||||| |||| ||||||||||||||    
T  2511332 gaggagaccaatcccaccgcccacttgcggaggtcccgtttaaagtcagagcgagctctgtatgaacttagc 2511403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 26108433 - 26108383
Alignment:
Q  293 cacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||| |||| |||||||||||| ||||||||||| |||||| |||||||    
T  26108433 cacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagc 26108383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 50731238 - 50731300
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtg 300  Q
    ||||||||||||||| | ||  || ||||| ||||||||||||||||||||||  ||||||||    
T  50731238 aaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttgtg 50731300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 50781616 - 50781554
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtg 300  Q
    ||||||||||||||| | ||  || ||||| ||||||||||||||||||||||  ||||||||    
T  50781616 aaactcggtatccgatccaaggatcgactaatctgaggggaccaatcccaccgcccacttgtg 50781554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 31537839 - 31537944
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||||||||| |  ||||||||||||| |||||  ||||||  ||| | |||||||||| ||||| ||||| |||||  |    
T  31537839 aaactcgatatccgatccaagaattgactaattcgaggggaccaatctcaccgcccacttgcaggggctccgtttaaagccagagtaagctctgtataga 31537938  T
Q  338 cttagc 343  Q
    ||||||    
T  31537939 cttagc 31537944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 303
Target Start/End: Original strand, 53848435 - 53848500
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggg 303  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||    
T  53848435 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg 53848500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 4048146 - 4048086
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttg 298  Q
    ||||||||||||||| | || |||  |||| || |||||||||||||||||||| ||||||    
T  4048146 aaactcggtatccgatccaagaatcaactaatccgaggggaccaatcccaccgtccacttg 4048086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 4252422 - 4252462
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtgggg 303  Q
    ||||| || |||||||||||||||||||| |||||||||||    
T  4252422 gactaatccgaggggaccaatcccaccgtccacttgtgggg 4252462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 14343315 - 14343394
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||| ||| |||||| |||| | |||| ||||||||||| |  |||||||||||||||||||| | |||||| |||||||    
T  14343315 gactaatctaaggggatcaattctaccgctcacttgtggg-ataccgtttaaaggcagagcaagttctgtatggacttagc 14343394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 25344059 - 25344162
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||| ||| |||| ||| ||||| || ||||  |||||||||| ||  |||| | |||| |||||||||||| |||||||| || |||||| |    
T  25344059 aaactcggtattcgatctaagaatcgactaatccgagga-accaatcccatcgcccactagcgggggccccgtttaaagccagagcaaactctgtatgga 25344157  T
Q  338 cttag 342  Q
    |||||    
T  25344158 cttag 25344162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 53288714 - 53288817
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| |||| |||| | |||||| ||||| |  |||||||| |||| |||||| |  ||| |||| |||||||||||| || ||||||||||||||| |    
T  53288714 aaacttggtaaccgatccaataatcgactaattcgaggggactaatctcaccgtccgtttgcgggg-ccccgtttaaagccaaagcaagctttgtatgga 53288812  T
Q  338 cttag 342  Q
    |||||    
T  53288813 cttag 53288817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 34237656 - 34237761
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||| |||||| |    
T  34237656 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagcaagctctgtatgga 34237755  T
Q  338 cttagc 343  Q
    ||||||    
T  34237756 cttagc 34237761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 4718845 - 4718740
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  4718845 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 4718746  T
Q  338 cttagc 343  Q
    ||||||    
T  4718745 cttagc 4718740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 32879479 - 32879374
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||| | | || ||| ||||| || |||||||||||||||||||  ||||||||||| |||||||||| | ||||||||||| ||||||||    
T  32879479 aaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaatgtcagagcaagctctgtatgaa 32879380  T
Q  338 cttagc 343  Q
    ||||||    
T  32879379 cttagc 32879374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 42328204 - 42328099
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  |||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||| |||||| |    
T  42328204 aaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagccagagcaagctctgtatgga 42328105  T
Q  338 cttagc 343  Q
    ||||||    
T  42328104 cttagc 42328099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 28193674 - 28193571
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  ||||||| ||| |||||||||||| ||||||||||| |||||| |    
T  28193674 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagcaagctctgtatgga 28193575  T
Q  338 ctta 341  Q
    ||||    
T  28193574 ctta 28193571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 8765527 - 8765632
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||  |||||||||||| ||||||||||| |||||| |    
T  8765527 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatgga 8765626  T
Q  338 cttagc 343  Q
    ||||||    
T  8765627 cttagc 8765632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 21603430 - 21603333
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| ||||||    
T  21603430 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatg 21603333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 2618386 - 2618281
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||| |||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| | |||||||||| ||||||||||| |||||| |    
T  2618386 aaactcggaatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctgtatgga 2618287  T
Q  338 cttagc 343  Q
    ||||||    
T  2618286 cttagc 2618281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 3734624 - 3734729
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||||||||||||| |  || ||| |||| |||||||||||| ||||||||||| |||||| |    
T  3734624 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaagctctgtatgga 3734723  T
Q  338 cttagc 343  Q
    ||||||    
T  3734724 cttagc 3734729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 39349456 - 39349351
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | || ||| ||||| || ||||||| |||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  39349456 aaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 39349357  T
Q  338 cttagc 343  Q
    ||||||    
T  39349356 cttagc 39349351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 325
Target Start/End: Original strand, 2639412 - 2639499
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaa 325  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  2639412 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 2639499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 20306108 - 20306003
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | ||  || ||||| |  |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |    
T  20306108 aaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatgga 20306009  T
Q  338 cttagc 343  Q
    ||||||    
T  20306008 cttagc 20306003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 21092741 - 21092636
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | ||  || ||||| |  |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |    
T  21092741 aaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatgga 21092642  T
Q  338 cttagc 343  Q
    ||||||    
T  21092641 cttagc 21092636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 42643119 - 42643224
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || |||  |||| |  |||||||||||||||||||  |||||| |||| |||||||| ||| ||||||||||| |||||| |    
T  42643119 aaactcggtatccgatccaagaatcaactaatgcgaggggaccaatcccaccgcccacttgcggggcccccgtttcaagacagagcaagctctgtatgga 42643218  T
Q  338 cttagc 343  Q
    ||||||    
T  42643219 cttagc 42643224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 15259407 - 15259512
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||| |||||| | || ||| ||||| |  ||||||||||||  |||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  15259407 aaactcggcatccgatccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 15259506  T
Q  338 cttagc 343  Q
    ||||||    
T  15259507 cttagc 15259512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Complemental strand, 24999394 - 24999329
Alignment:
Q  278 accaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||||  |||||| |||| |||||||||||| ||||||||||| | ||||||||||||    
T  24999394 accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctatatgaacttagc 24999329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 4698724 - 4698812
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaag 326  Q
    ||||||||||||| | | |  ||| ||||| || ||||||||||||||||||| ||||||| |||| | |||||||||| |||||||||    
T  4698724 aaactcggtatccaatccatgaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggctccgtttaaagccagagcaag 4698812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 10292254 - 10292167
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaa 325  Q
    ||||||||||| ||| | || |||  |||| || || ||||||||||||||||  ||||||||||| |||||||||||| ||||||||    
T  10292254 aaactcggtattcgatccaagaatcaactaatccgaagggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaa 10292167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 18128713 - 18128626
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaa 325  Q
    ||||||||||| ||| | || ||  ||||| |||||| |||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  18128713 aaactcggtattcgatccaagaaccgactaatctgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaa 18128626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 19471810 - 19471703
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggga-ccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||||||||||||| | ||  || ||||| |  |||||||||||||||| ||  |||||| ||||  |||||||||||| ||||||||||| ||||||     
T  19471810 aaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatgg 19471711  T
Q  337 acttagct 344  Q
    ||||||||    
T  19471710 acttagct 19471703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 19542734 - 19542627
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggga-ccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||||||||||||| | ||  || ||||| |  |||||||||||||||| ||  |||||| ||||  |||||||||||| ||||||||||| ||||||     
T  19542734 aaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatgg 19542635  T
Q  337 acttagct 344  Q
    ||||||||    
T  19542634 acttagct 19542627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 19589962 - 19590069
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggga-ccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||||||||||||| | ||  || ||||| |  |||||||||||||||| ||  |||||| ||||  |||||||||||| ||||||||||| ||||||     
T  19589962 aaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagctctgtatgg 19590061  T
Q  337 acttagct 344  Q
    ||||||||    
T  19590062 acttagct 19590069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 24018548 - 24018477
Alignment:
Q  273 aggggaccaatcccaccgttcacttgtggggac-cccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||| |||||  ||||||||||||  ||||||||||| ||||||||||| |||||| |||||||    
T  24018548 aggggaccaatctcaccgcccacttgtggggaggcccgtttaaagccagagcaagctctgtatggacttagc 24018477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 341
Target Start/End: Complemental strand, 28088478 - 28088383
Alignment:
Q  246 tatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||| | || ||| ||||| |||||||||| |||||||||||  |||||| || | |||| ||||||| ||||||||||| |||||| |||||    
T  28088478 tatccgatccaagaatcgactattctgaggggatcaatcccaccgcccacttgcggaggccccatttaaagtcagagcaagctctgtatggactta 28088383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 2166896 - 2166792
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||| | | || ||| ||||| ||||||||||||||||||||||  |||||| ||||  |   ||||||| ||||||||||| |||||| |    
T  2166896 aaactcggtatccaatcaaaaaatcgactaatctgaggggaccaatcccaccgcccacttgcgggg-tcttatttaaagccagagcaagctctgtatgga 2166798  T
Q  338 cttagc 343  Q
    ||||||    
T  2166797 cttagc 2166792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 6953009 - 6953113
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||| ||| | || ||| ||||| || ||||| |||||||||||||   ||||| |||| ||| |||||||| ||||||||||| |||||| |    
T  6953009 aaactcggtattcgatccaagaatcgactaatccgaggg-accaatcccaccgccaacttgcgggggccctgtttaaagccagagcaagctctgtatgga 6953107  T
Q  338 cttagc 343  Q
    ||||||    
T  6953108 cttagc 6953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 20470116 - 20470012
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||  |||||||||||||  |||||| |||| | | |||||||| ||||||||||| |||||| |    
T  20470116 aaactcggtatccgatccaaaaatcgactaatccgagga-accaatcccaccgcccacttgcgggggctctgtttaaagccagagcaagctctgtatgga 20470018  T
Q  338 cttagc 343  Q
    ||||||    
T  20470017 cttagc 20470012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 25248546 - 25248450
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| | ||  ||||||||||| |||||||| || |||||||    
T  25248546 aaactcggtatccgatcaaa-aatcgactaatccgaggggaccaatcccaccgcccacttgcgagg-gcccgtttaaagccagagcaaactctgtatga 25248450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 14633154 - 14633049
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | || ||| ||||| ||  ||||||||||||||||||  |||||||||   | ||||| |||| ||||||||||| |||||  |    
T  14633154 aaacttggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgtggacgctccgttcaaagccagagcaagctctgtataga 14633055  T
Q  338 cttagc 343  Q
    ||||||    
T  14633054 cttagc 14633049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 343
Target Start/End: Complemental strand, 21667681 - 21667645
Alignment:
Q  307 ccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||||||||||||| |||||| |||||||    
T  21667681 ccgtttaaaggcagagcaagctctgtatggacttagc 21667645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 8484662 - 8484767
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| ||||||||    
T  8484662 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgaa 8484761  T
Q  338 cttagc 343  Q
    ||||||    
T  8484762 cttagc 8484767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 7085627 - 7085732
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||||||   || ||| ||||| || |||||||||||||||||||  |||||| ||||||||||||||||| ||||||||||| |||||| |    
T  7085627 aaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagtcagagcaagctctgtatgga 7085726  T
Q  338 cttagc 343  Q
    ||||||    
T  7085727 cttagc 7085732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 27498732 - 27498837
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  27498732 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctatgtatgga 27498831  T
Q  338 cttagc 343  Q
    ||||||    
T  27498832 cttagc 27498837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 15641107 - 15641211
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  15641107 aaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 15641205  T
Q  338 cttagc 343  Q
    ||||||    
T  15641206 cttagc 15641211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 19456212 - 19456316
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  19456212 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg-ccccgtttaaagccagagcaagctctgtatgga 19456310  T
Q  338 cttagc 343  Q
    ||||||    
T  19456311 cttagc 19456316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 30486024 - 30485919
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||||||||| || |||||||||||||||||||  |||||| |||| |  ||||||||| ||||||||||| |||||| |    
T  30486024 aaactcggtatccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagcaagctctgtatgga 30485925  T
Q  338 cttagc 343  Q
    ||||||    
T  30485924 cttagc 30485919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 18207403 - 18207298
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| || ||||||||| |||| |||||| |||||| |    
T  18207403 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaacaagctctgtatgga 18207304  T
Q  338 cttagc 343  Q
    ||||||    
T  18207303 cttagc 18207298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 32059441 - 32059546
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | ||  |  ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  32059441 aaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 32059540  T
Q  338 cttagc 343  Q
    ||||||    
T  32059541 cttagc 32059546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 34310338 - 34310233
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| || || |  |||||||||||||||||||| ||||| |||||  ||||||||||| ||||||||||| |||||| |    
T  34310338 aaactcggtatccgatccaagaatcgattaattcgaggggaccaatcccaccgtccacttatgggggtcccgtttaaagccagagcaagctctgtatgga 34310239  T
Q  338 cttagc 343  Q
    ||||||    
T  34310238 cttagc 34310233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 38684399 - 38684299
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||||||| | || ||| ||||| || ||||||||||||||||||| ||||||| ||||  ||||||||||| ||||||||||| |||||| |||||    
T  38684399 tcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggg-gcccgtttaaagccagagcaagctctgtatggactta 38684301  T
Q  342 gc 343  Q
    ||    
T  38684300 gc 38684299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 22392884 - 22392796
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaag 326  Q
    ||||||||||||||| | || ||| ||||| ||||||||||||||| ||||||  |||||| |||| |||||||||||| |||||||||    
T  22392884 aaactcggtatccgatccaaaaatcgactaatctgaggggaccaattccaccgcccacttgcgggggccccgtttaaagccagagcaag 22392796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 11926502 - 11926608
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttg-tggggaccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||||||||||||| | || ||| ||||| || ||||||||||||||||||   ||||||  |||| |||||||||||| ||||||||||| ||||||     
T  11926502 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagcaagctctgtatgg 11926601  T
Q  337 acttagc 343  Q
    |||||||    
T  11926602 acttagc 11926608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 4603973 - 4603868
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | ||  |  ||||| || |||||||||||||||||||| ||||||  ||| |||||||||||| |||||| |||| |||||| |    
T  4603973 aaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagccagagcgagctctgtatgga 4603874  T
Q  338 cttagc 343  Q
    ||||||    
T  4603873 cttagc 4603868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 21236363 - 21236468
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||||||   || ||| ||||| ||||||||||| ||||||||||  |||||| |||| |||||||||||| ||||| || || |||||| |    
T  21236363 aaactcggtatccgattcaagaatcgactaatctgaggggactaatcccaccgcccacttgcgggggccccgtttaaagtcagagaaaactctgtatgga 21236462  T
Q  338 cttagc 343  Q
    ||||||    
T  21236463 cttagc 21236468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 34050007 - 34049902
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||||||  | | |||  |||| || |||||||||||||| ||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  34050007 aaactcggtatccgatttgagaatcaactaatccgaggggaccaatcctaccgaccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 34049908  T
Q  338 cttagc 343  Q
    ||||||    
T  34049907 cttagc 34049902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 35425205 - 35425104
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||||||| | || ||| ||||| || ||| |||||||||||||||  |||||| |||| |||||||||||| |||||| |||| |||||| |||||    
T  35425205 tcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcgagctctgtatggactta 35425106  T
Q  342 gc 343  Q
    ||    
T  35425105 gc 35425104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 41351105 - 41351194
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| || | |||||||||||| |||||||||||    
T  41351105 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggag-ccccgtttaaagccagagcaagct 41351194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 9659312 - 9659417
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||| | | || |||  |||| || || ||||||||||||||||| |||||| ||||  ||| ||||||| ||||||||||| |||||| |    
T  9659312 aaactcggtatcccatccaagaatcaactaatccgaagggaccaatcccaccgtccacttgcggggggcccatttaaagccagagcaagctgtgtatgga 9659411  T
Q  338 cttagc 343  Q
    ||||||    
T  9659412 cttagc 9659417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 343
Target Start/End: Original strand, 11464913 - 11465013
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||||||| | || ||| ||||| |  ||||||||||||||||||   |||||| |||| |||||||||||| ||||| ||||| ||||||||||||    
T  11464913 tcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccacccacttgcgggg-ccccgtttaaagccagagtaagctctgtatgaactta 11465011  T
Q  342 gc 343  Q
    ||    
T  11465012 gc 11465013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 22693131 - 22693054
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaa 315  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||    
T  22693131 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaa 22693054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 341
Target Start/End: Original strand, 31287981 - 31288050
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    |||| ||||||||||||||  |||||| |||| |||||||||||| || ||||||||||||||| |||||    
T  31287981 gaggagaccaatcccaccgcccacttgcgggggccccgtttaaagtcaaagcaagctttgtatggactta 31288050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 33709504 - 33709589
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagc 323  Q
    |||| |||||||||| | || ||| ||||| || |||||||||||||||||||  |||||||||||  ||||||||||| ||||||    
T  33709504 aaacacggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggtcccgtttaaagccagagc 33709589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 5049295 - 5049229
Alignment:
Q  275 gggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttag 342  Q
    ||||||||||||||||| || ||| |||| ||| |||||||| ||||||||||| |||||||||||||    
T  5049295 gggaccaatcccaccgtccatttgcgggggccc-gtttaaagccagagcaagctctgtatgaacttag 5049229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 6014281 - 6014384
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||| ||||| |  |||||||| |||| |||||  |||||| | ||||||||||||||| ||||||||||| |||||| |    
T  6014281 aaactcgatatccgatccaagaatcgactaattcgaggggactaatctcaccgcccacttgcgtggaccccgtttaaagccagagcaagctctgtatgga 6014380  T
Q  338 ctta 341  Q
    ||||    
T  6014381 ctta 6014384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 23270557 - 23270628
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||||||||||| || ||| |||| | |||||||||| || |||||||| |||||| |||||||    
T  23270557 gaggggaccaatcccaccgtccatttgcgggggctccgtttaaagccaaagcaagctctgtatggacttagc 23270628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 27487555 - 27487660
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttg-tggggaccccgtttaaaggcagagcaagctttgtatga 336  Q
    |||||| |||||||| | || ||| ||||| || |||||||||||||||||||  ||||||   ||| ||||||||||||  |||||||||| ||||||     
T  27487555 aaactctgtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaagggcccccgtttaaagctagagcaagctctgtatgg 27487654  T
Q  337 acttag 342  Q
    ||||||    
T  27487655 acttag 27487660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 4820912 - 4820990
Alignment:
Q  45 cagacaattttttatgaag---aagtgcttccacatcaaacaataattaataggttatcttgatc--aaatagaggcaaatgt 122  Q
    |||||||||||||||||||   |||||||||||| ||||||||    ||||||||||||||| ||  ||||||||||||||||    
T  4820912 cagacaattttttatgaagaagaagtgcttccacttcaaacaa----taataggttatcttggtcaaaaatagaggcaaatgt 4820990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 12398449 - 12398553
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||| | | || ||  ||||| | |||| ||| ||||| |||||| || ||| |||| |||| ||||||| ||||||||||| ||||||||    
T  12398449 aaactcggtatccaatccaagaaccgactaatttgagaggatcaatctcaccgtccatttgcgggggccccatttaaagccagagcaagctctgtatgaa 12398548  T
Q  338 cttag 342  Q
    |||||    
T  12398549 cttag 12398553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 15971144 - 15971228
Alignment:
Q  259 aattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||| || || ||||||| ||||| |||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |||||||    
T  15971144 aattgattaatccgaggggatcaatctcaccgcccacttgcgggggtcccgtttaaagtcagagcaagctatgtatggacttagc 15971228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 13108485 - 13108555
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||| |||||||||||  |||||| |||| ||||||||||||||||| |  ||| ||||||||||||||    
T  13108485 gaggggatcaatcccaccgcccacttgcgggggccccgtttaaaggcaga-cttgctctgtatgaacttagc 13108555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 28614487 - 28614589
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  ||||||| |||||||||||| ||  || ||| | ||||||||||| |||| ||||||||||||| |    
T  28614487 aaactcggtatccgatccaaaaatcgactaattcgaggggatcaatcccaccgtccatctgcggg-atcccgtttaaagtcagaacaagctttgtatgga 28614585  T
Q  338 ctta 341  Q
    ||||    
T  28614586 ctta 28614589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 343
Target Start/End: Complemental strand, 10399930 - 10399864
Alignment:
Q  277 gaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||||||||||| |||||  |||| |||||||||||| ||||||| |||  ||||| |||||||    
T  10399930 gaccaatcccaccgtccacttacgggggccccgtttaaagtcagagcatgctccgtatggacttagc 10399864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 10869566 - 10869656
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    ||||| ||||||||| | || ||  ||||| || |||||||||||||||||||  |||||| || | |||| ||||||| |||||||||||    
T  10869566 aaacttggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcggaggccccatttaaagccagagcaagct 10869656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 12317156 - 12317245
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    ||||||||||||||| |||| ||||||||| || || |||| ||||||||||   |||||| ||||  |||| |||||| |||||||||||    
T  12317156 aaactcggtatccgatctaagaattgactaatccga-gggatcaatcccaccacccacttgcggggggcccgcttaaagtcagagcaagct 12317245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 15485292 - 15485396
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagca-agctttgtatga 336  Q
    |||||| |||||| |||||| |   ||||| || |||||| ||||||||||| | |||||| ||||||||| ||||||| |||| || || ||||||||     
T  15485292 aaactctgtatccaacctaagagccgactaatccgaggggtccaatcccaccatccacttgcggggaccccatttaaagccagaacatagttttgtatgg 15485391  T
Q  337 actta 341  Q
    |||||    
T  15485392 actta 15485396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 16247027 - 16247079
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaa 315  Q
    ||||| || |||||| ||||||||||||| |||||||||||| ||| ||||||    
T  16247027 gactaatccgaggggtccaatcccaccgtccacttgtggggagcccatttaaa 16247079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 37495250 - 37495198
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccg 290  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||    
T  37495250 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccg 37495198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 4621238 - 4621343
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||||||||||||||| ||||||||||| |||||| |    
T  4621238 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagctctgtatgga 4621337  T
Q  338 cttagc 343  Q
    ||||||    
T  4621338 cttagc 4621343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 15059403 - 15059508
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  ||||||||||||| |||||  |||||| ||||||||||||||||| ||||||||||| |||||| |    
T  15059403 aaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagcaagctctgtatgga 15059502  T
Q  338 cttagc 343  Q
    ||||||    
T  15059503 cttagc 15059508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 24122219 - 24122114
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||  |||||||||||| ||||||||||| |||||| |    
T  24122219 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatgga 24122120  T
Q  338 cttagc 343  Q
    ||||||    
T  24122119 cttagc 24122114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 241 - 343
Target Start/End: Complemental strand, 1379090 - 1378989
Alignment:
Q  241 ctcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactt 340  Q
    |||||||||||| |||| ||| ||||| |||||||||||||||| |||||| |||||| ||||  ||||||||||| ||||||||| | |||||| ||||    
T  1379090 ctcggtatccgatctaagaatcgactaatctgaggggaccaatctcaccgtccacttgcgggg-gcccgtttaaagccagagcaagttctgtatggactt 1378992  T
Q  341 agc 343  Q
    |||    
T  1378991 agc 1378989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 7766728 - 7766833
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| |||||||   || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  7766728 aaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagcaagctctgtatgga 7766827  T
Q  338 cttagc 343  Q
    ||||||    
T  7766828 cttagc 7766833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 24674585 - 24674484
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||||||| | || ||| ||||| |  |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |||||    
T  24674585 tcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggactta 24674486  T
Q  342 gc 343  Q
    ||    
T  24674485 gc 24674484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 8779744 - 8779842
Alignment:
Q  245 gtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||| |||| ||| ||||| || |||||||||||||||||||   |||||||||| ||||||||||||  |||| ||||| |||||| |||||||    
T  8779744 gtatccgatctaagaatcgactaatccgaggggaccaatcccaccgcctacttgtgggggccccgtttaaagctagagtaagctgtgtatggacttagc 8779842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 7578605 - 7578500
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || |||  |||| || ||||| ||||||||||||   |||||| | || |||||||||||| |||||||||||||||||| |    
T  7578605 aaactcggtatccgatccaaaaatcaactaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaagtcagagcaagctttgtatgga 7578506  T
Q  338 cttagc 343  Q
    ||||||    
T  7578505 cttagc 7578500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 17935965 - 17935860
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||| |||||||||||| ||  |||||| |||| |||||||||||| |||||||| || |||||| |    
T  17935965 aaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagccagagcaaactctgtatgga 17935866  T
Q  338 cttagc 343  Q
    ||||||    
T  17935865 cttagc 17935860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 32930941 - 32930840
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||||| | |||| ||| || || |||||||||| |||||||||| | ||||||  |||||||||||||||| ||||||||||| || ||| |||||    
T  32930941 tcggtatccaatctaagaatcgattaatctgaggggatcaatcccaccatccacttgcagggaccccgtttaaagccagagcaagctctgcatggactta 32930842  T
Q  342 gc 343  Q
    ||    
T  32930841 gc 32930840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 34778535 - 34778438
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    ||||||||||||||| | || ||| ||||| ||  ||||||||||||||||||| |||||| |||| |||||||||||| || ||||| || ||||||    
T  34778535 aaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccaaagcaaactctgtatg 34778438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 343
Target Start/End: Complemental strand, 8077841 - 8077738
Alignment:
Q  239 aactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaac 338  Q
    |||||||| ||||| | |||||| || || || |||||||||||||||||||  |||||| |||| ||| |||||||| ||||||||||| |||||| ||    
T  8077841 aactcggtctccgatccaataatcgattaatc-gaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggac 8077743  T
Q  339 ttagc 343  Q
    |||||    
T  8077742 ttagc 8077738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 334
Target Start/End: Original strand, 26513149 - 26513244
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtat 334  Q
    ||||||||||| ||| | || ||| ||||| || |||||||||| ||||||||  |||||||||||  ||||||||||| |||||||||||||||||    
T  26513149 aaactcggtattcgatccaagaatcgactaatccgaggggaccattcccaccgcccacttgtgggg-gcccgtttaaagtcagagcaagctttgtat 26513244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 12876971 - 12877034
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||  |||||||||| ||||||    
T  12876971 gaggggaccaatcccaccgtccacttgcgggggccccgtttaaagctagagcaagctctgtatg 12877034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 343
Target Start/End: Original strand, 8254788 - 8254858
Alignment:
Q  273 aggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||| |||||||||||  |||||| |||| |||||||||||| ||||||||| | ||||||||||||||    
T  8254788 aggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctgtatgaacttagc 8254858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 45331622 - 45331728
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggga-ccccgtttaaaggcagagcaagctttgtatga 336  Q
    |||||||||||||||   || ||| || || ||||||||||  ||||||||||| |||||| ||||| |||||||||||| || |||||||| ||||||     
T  45331622 aaactcggtatccgattcaagaatcgattaatctgaggggattaatcccaccgtccacttgcggggagccccgtttaaagccaaagcaagctctgtatgg 45331721  T
Q  337 acttagc 343  Q
    |||||||    
T  45331722 acttagc 45331728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 2272540 - 2272435
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||| |||||||| || | ||| ||||| || || |||| |||||| ||||  | ||||| ||| |||||||||||| |||||||| |||||||||||    
T  2272540 aaactcagtatccgatcttagaatcgactaatccgatgggatcaatcctaccgcccccttgtaggggccccgtttaaagtcagagcaaactttgtatgaa 2272441  T
Q  338 cttagc 343  Q
    ||||||    
T  2272440 cttagc 2272435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 9500356 - 9500461
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||| ||||| || || | |||||||| |||||  ||||||||||| | |||||||||| ||||||||||| |||||| |    
T  9500356 aaactcgatatccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagcaagctctgtatgga 9500455  T
Q  338 cttagc 343  Q
    ||||||    
T  9500456 cttagc 9500461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 30677347 - 30677267
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||| ||||||||||||||||||||||  |||||| ||||  ||| ||||||| || |||||||| |||||| |||||||    
T  30677347 gactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagcaagctctgtatggacttagc 30677267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 32729705 - 32729638
Alignment:
Q  273 aggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactt 340  Q
    |||||| |||||||||||  |||||| ||||||||| ||||||| ||||||||||| |||||| ||||    
T  32729705 aggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctctgtatggactt 32729638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 22910067 - 22909977
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    ||||||||||||||| | ||  || ||||| || |||||||| ||||||||||  |||||| |||| | |||||||||| |||||||||||    
T  22910067 aaactcggtatccgatcgaagtatcgactaatccgaggggacaaatcccaccgcccacttgcgggggctccgtttaaagtcagagcaagct 22909977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 168397 - 168292
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||  |||| || | |||| || |||||||||||||||||||  |||| | |||   ||||||||||| |||| |||||| ||||||||    
T  168397 aaacttggtatccggtctaagaactaactaatccgaggggaccaatcccaccggccactagcgggagtcccgtttaaagtcagaacaagctctgtatgaa 168298  T
Q  338 cttagc 343  Q
    ||||||    
T  168297 cttagc 168292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 18533725 - 18533829
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| |||| ||| || || | |||||||||||||||||| |  ||||||  ||| |||||||||||| |||| |||||| | |||| |    
T  18533725 aaacttggtatccgatctaagaatcgattaatatgaggggaccaatcccacggcccacttgcaggggccccgtttaaagtcagaacaagctctatatgga 18533824  T
Q  338 cttag 342  Q
    |||||    
T  18533825 cttag 18533829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 23734313 - 23734207
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggga-ccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||| |||||||||   || ||| ||||| |||||||||||||||  |||||  |||||| ||||  ||||||||||||||| ||||| || ||||||     
T  23734313 aaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaactctgtatgg 23734214  T
Q  337 acttagc 343  Q
    |||||||    
T  23734213 acttagc 23734207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 23741505 - 23741399
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggga-ccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||| |||||||||   || ||| ||||| |||||||||||||||  |||||  |||||| ||||  ||||||||||||||| ||||| || ||||||     
T  23741505 aaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaactctgtatgg 23741406  T
Q  337 acttagc 343  Q
    |||||||    
T  23741405 acttagc 23741399  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 27159281 - 27159216
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggg 303  Q
    ||||||| ||||||| | ||  || ||||| ||||||||||||||||||||||| |||||| ||||    
T  27159281 aaactcgatatccgatccaaagatcgactaatctgaggggaccaatcccaccgtccacttgcgggg 27159216  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 37351454 - 37351538
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagc 323  Q
    ||||||||||||||| | ||  |  ||||| || |||||||||||||||||||  |||||||||||  ||||||||||| ||||||    
T  37351454 aaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgtgggg-gcccgtttaaagccagagc 37351538  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 343
Target Start/End: Original strand, 45859048 - 45859149
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||||||| | ||||||  |||| || |||||||||||||| |||   |||||| |||| ||| ||||||||  |||||||||  |||||| |||||    
T  45859048 tcggtatccgatccaataatcaactaatccgaggggaccaatcctaccacccacttgcgggggccctgtttaaagcaagagcaagcgatgtatggactta 45859147  T
Q  342 gc 343  Q
    ||    
T  45859148 gc 45859149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 7197248 - 7197336
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaag 326  Q
    ||||||||||||||| | |  ||| ||||| || ||||||||||||| |||||  ||||||  ||| || ||||||||| |||||||||    
T  7197248 aaactcggtatccgatccatgaatcgactaatccgaggggaccaatctcaccgcccacttgcaggggcctcgtttaaagccagagcaag 7197336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 37047153 - 37047101
Alignment:
Q  273 aggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaa 325  Q
    ||||| ||||||||||||| ||||||||||| |||| |||||||  |||||||    
T  37047153 aggggtccaatcccaccgtccacttgtgggggccccatttaaagctagagcaa 37047101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 46607981 - 46607901
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||| || ||||||| |||||||||||  |||||| ||||   || ||||||| ||||||||||| |||||| |||||||    
T  46607981 gactaatccgaggggatcaatcccaccgcccacttgcgggggggccttttaaagtcagagcaagctctgtatggacttagc 46607901  T

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Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 654147 - 654252
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | |||||| ||||| || |||||||||||||||||||  |||||| |||  |||||||||||| ||||||||||| |||||| |    
T  654147 aaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatgga 654246  T
Q  338 cttagc 343  Q
    ||||||    
T  654247 cttagc 654252  T

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Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 1345131 - 1345026
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| ||  ||||||||||||||||||| |||||| ||||  ||||||||||| |||||||||||||||||| |    
T  1345131 aaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagcaagctttgtatgga 1345032  T
Q  338 cttagc 343  Q
    ||||||    
T  1345031 cttagc 1345026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 9690639 - 9690744
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||| |||||||||||||||| |||||||| || |||||||||||| ||||||||||| |||||| |    
T  9690639 aaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagcaagctctgtatgga 9690738  T
Q  338 cttagc 343  Q
    ||||||    
T  9690739 cttagc 9690744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 3222637 - 3222741
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  3222637 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg-ccccgtttaaagacagagcaagctctgtatgga 3222735  T
Q  338 cttagc 343  Q
    ||||||    
T  3222736 cttagc 3222741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 5360072 - 5360177
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| |||| ||| ||||| |  |||||||||||||||||||  |||||||||||   |||||||||| ||||||||||| |||||| |    
T  5360072 aaactcggtatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttgtgggggttccgtttaaagtcagagcaagctctgtatgga 5360171  T
Q  338 cttagc 343  Q
    ||||||    
T  5360172 cttagc 5360177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 15360099 - 15360204
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  || ||| |||| |||||||||||| ||||||||||| |||||| |    
T  15360099 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatgga 15360198  T
Q  338 cttagc 343  Q
    ||||||    
T  15360199 cttagc 15360204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 34147542 - 34147437
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |    
T  34147542 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatgga 34147443  T
Q  338 cttagc 343  Q
    ||||||    
T  34147442 cttagc 34147437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 34160158 - 34160053
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |    
T  34160158 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctctgtatgga 34160059  T
Q  338 cttagc 343  Q
    ||||||    
T  34160058 cttagc 34160053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 11449067 - 11448962
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| |||||||   || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  11449067 aaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 11448968  T
Q  338 cttagc 343  Q
    ||||||    
T  11448967 cttagc 11448962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 21148512 - 21148616
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||||||   || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  21148512 aaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg-ccccgtttaaagtcagagcaagctctgtatgga 21148610  T
Q  338 cttagc 343  Q
    ||||||    
T  21148611 cttagc 21148616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 21982322 - 21982426
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||| |||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  21982322 aaactcggtatccgatccaagaatcgactaatccgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 21982420  T
Q  338 cttagc 343  Q
    ||||||    
T  21982421 cttagc 21982426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 11841096 - 11840994
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | |||||| ||||| |  |||||||| ||||||||||| ||||| ||||| |||||||||||  || ||||||||||||||| |    
T  11841096 aaactcggtatccgatccaataatcgactaattcgaggggactaatcccaccgtccacttatgggg-ccccgtttaaaaccaaagcaagctttgtatgga 11840998  T
Q  338 ctta 341  Q
    ||||    
T  11840997 ctta 11840994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 11007361 - 11007256
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | || ||| ||||| || |||||| ||||||||||||  |||||| |||| ||||| ||||||  ||||||||||||||||| |    
T  11007361 aaactaggtatccgatcaaagaatcgactaatccgagggggccaatcccaccgcccacttgcgggggccccgcttaaagctagagcaagctttgtatgga 11007262  T
Q  338 cttagc 343  Q
    ||||||    
T  11007261 cttagc 11007256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 12390601 - 12390516
Alignment:
Q  258 taattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||| ||||| || |||||||||||||||||||  |||||| |||| ||| |||||||| ||||||||||| |||||| |||||||    
T  12390601 taatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagc 12390516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 9239171 - 9239068
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||| ||||||| || |||||||| | |||| |    
T  9239171 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaagctctatatgga 9239072  T
Q  338 ctta 341  Q
    ||||    
T  9239071 ctta 9239068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 17081089 - 17081160
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||||||||||  |||||| |||| |||| ||||||| ||||||||||| |||||| |||||||    
T  17081089 gaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctctgtatggacttagc 17081160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 9844134 - 9844031
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||| ||||| || || |||||||||| |||||  |||||| |||| |||||||||||| |||| |||||| |||||| |    
T  9844134 aaactcgatatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgagggggccccgtttaaagccagaacaagctctgtatgga 9844035  T
Q  338 ctta 341  Q
    ||||    
T  9844034 ctta 9844031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 15730496 - 15730594
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatga 336  Q
    ||||||| ||||||| | || ||| ||||| || |||| ||||||||||||||  ||| ||||||| || ||||||||| |||| |||||| |||||||    
T  15730496 aaactcgatatccgatcaaagaatcgactaatccgaggtgaccaatcccaccgcccacgtgtgggggccacgtttaaagccagaacaagctctgtatga 15730594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 17149491 - 17149545
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaag 326  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||| || ||||||    
T  17149491 gaggggaccaatcccaccgttcacttgcgggggccccatttaaagccaaagcaag 17149545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 28672263 - 28672158
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||| || | || ||| ||||| || |||||||||||||||||||  |||||| | ||  ||||||||||| || | |||||| |||||| |    
T  28672263 aaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaagctctgtatgga 28672164  T
Q  338 cttagc 343  Q
    ||||||    
T  28672163 cttagc 28672158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 14213078 - 14213000
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaag 316  Q
    ||||||||||||||| | || ||| ||||| || ||| ||||||||||||||   |||||| |||| ||||||||||||    
T  14213078 aaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcggggcccccgtttaaag 14213000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 9208448 - 9208360
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaag 326  Q
    |||||||||||  || | || ||| ||||| ||||||| ||||||||||||||  |||||| |||| |||| ||||||| || ||||||    
T  9208448 aaactcggtatttgatccaagaatcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaag 9208360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 34844759 - 34844864
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  34844759 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 34844858  T
Q  338 cttagc 343  Q
    ||||||    
T  34844859 cttagc 34844864  T

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Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 40058853 - 40058958
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  40058853 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 40058952  T
Q  338 cttagc 343  Q
    ||||||    
T  40058953 cttagc 40058958  T

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Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 52983815 - 52983710
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  52983815 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 52983716  T
Q  338 cttagc 343  Q
    ||||||    
T  52983715 cttagc 52983710  T

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Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 5609203 - 5609308
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||| |||||||||||| |||||| |||| |||| ||||||| ||||||||||| |||||| |    
T  5609203 aaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatgga 5609302  T
Q  338 cttagc 343  Q
    ||||||    
T  5609303 cttagc 5609308  T

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Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 32986393 - 32986288
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||| ||||||| ||||||||||| |||||| |    
T  32986393 aaactcggtatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctctgtatgga 32986294  T
Q  338 cttagc 343  Q
    ||||||    
T  32986293 cttagc 32986288  T

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Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 32990631 - 32990526
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||| |||| ||| | || ||| |||||||| |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  32990631 aaactcagtattcgatccaagaatcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 32990532  T
Q  338 cttagc 343  Q
    ||||||    
T  32990531 cttagc 32990526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 34723995 - 34723890
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||| ||||||||||||||   |||||| |||| |||||||||||| |||||||||||||||||| |    
T  34723995 aaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctttgtatgga 34723896  T
Q  338 cttagc 343  Q
    ||||||    
T  34723895 cttagc 34723890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 45787705 - 45787810
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  |||||||||||||||||||| |||||| |||| ||| |||||||| ||||||||||| |||||| |    
T  45787705 aaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccctgtttaaagccagagcaagctctgtatgga 45787804  T
Q  338 cttagc 343  Q
    ||||||    
T  45787805 cttagc 45787810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 27528796 - 27528901
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||||||||| |||||  |||||| |||| |||||| ||||| ||||||||||| |||||| |    
T  27528796 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagcaagctctgtatgga 27528895  T
Q  338 cttagc 343  Q
    ||||||    
T  27528896 cttagc 27528901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 46714589 - 46714484
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||||||   || ||||||||| || |||||||||||||||||||  |||||| |||| ||||||||||||  || ||||||| |||||| |    
T  46714589 aaactcggtatccgattcaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcaagggcaagctctgtatgga 46714490  T
Q  338 cttagc 343  Q
    ||||||    
T  46714489 cttagc 46714484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 36131511 - 36131615
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||| || |||||||| ||||| || |||||||||||||||||||  |||||  ||||  ||||||||||| || |||||||| |||||| |    
T  36131511 aaactcggtatctgatctaataatcgactaatccgaggggaccaatcccaccgcccacttacgggggtcccgtttaaagtcatagcaagctctgtatgga 36131610  T
Q  338 cttag 342  Q
    |||||    
T  36131611 cttag 36131615  T

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Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 19660533 - 19660636
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||| |||||||||||  |||||| |||| ||| |||||||| ||||||||||| |||||| |    
T  19660533 aaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatgga 19660632  T
Q  338 ctta 341  Q
    ||||    
T  19660633 ctta 19660636  T

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Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 340
Target Start/End: Complemental strand, 20566546 - 20566444
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||| ||||| ||||||||||||||||||| ||  |||||| |||| | |||||||||| ||||||||||| |||||| |    
T  20566546 aaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccagcgcccacttgcgggggctccgtttaaagccagagcaagctctgtatgga 20566447  T
Q  338 ctt 340  Q
    |||    
T  20566446 ctt 20566444  T

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Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 35229360 - 35229258
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgt-ggggaccccgtttaaaggcagagcaagctttgtatgaactt 340  Q
    ||||||||||| | || ||| ||||| |  ||||||||||||||||||| |||||||| ||||  ||||||||||| ||||||||||| |||||| ||||    
T  35229360 tcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgctcacttgtggggggacccgtttaaagtcagagcaagctatgtatggactt 35229261  T
Q  341 agc 343  Q
    |||    
T  35229260 agc 35229258  T

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Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 33696280 - 33696385
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||||||||| || ||| ||||||||| |||||  |||||| |||| |||| ||||||| ||||||||||| |||||| |    
T  33696280 aaactcgatatccgatccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatgga 33696379  T
Q  338 cttagc 343  Q
    ||||||    
T  33696380 cttagc 33696385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 44343710 - 44343605
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||||||   || ||| ||||| |  |||||||||||||||||||  |||||| |||  |||||||||||| ||||||||||| |||||| |    
T  44343710 aaactcggtatccgattcaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagtcagagcaagctctgtatgga 44343611  T
Q  338 cttagc 343  Q
    ||||||    
T  44343610 cttagc 44343605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 343
Target Start/End: Original strand, 20077986 - 20078090
Alignment:
Q  239 aactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaac 338  Q
    |||||||||||||| | || ||| ||||| || ||||| || ||||||||||  |||||  |||| |||||||||||| ||||||||||| |||||| ||    
T  20077986 aactcggtatccgatccaagaatcgactaatccgagggaactaatcccaccgcccacttacgggggccccgtttaaagccagagcaagctctgtatggac 20078085  T
Q  339 ttagc 343  Q
    |||||    
T  20078086 ttagc 20078090  T

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Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 54127368 - 54127448
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||  |||||||    
T  54127368 gactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagc 54127448  T

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Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 32942532 - 32942461
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||||||||||| |||||||||||   |||||||||| ||||| ||||| |||||| |||||||    
T  32942532 gaggggaccaatcccaccgtccacttgtgggggggccgtttaaagccagagtaagctctgtatggacttagc 32942461  T

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Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 21387488 - 21387591
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | |||||| ||||| || ||||||||||  |||||||  |||||| ||||| ||||||||||| ||||||||||| |||||  |    
T  21387488 aaacttggtatccgatccaataatcgactaatccgaggggacca--cccaccgcccacttgcggggatcccgtttaaagccagagcaagctctgtataga 21387585  T
Q  338 cttagc 343  Q
    ||||||    
T  21387586 cttagc 21387591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 18875518 - 18875622
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||| || | || ||||||||| || ||||||| |||||||||    ||||||||||| ||| |||||||| ||||||||||| |||||| |    
T  18875518 aaactcggtatctgatccaaaaattgactaatccgaggggatcaatcccactacccacttgtgggggccc-gtttaaagccagagcaagctctgtatgga 18875616  T
Q  338 cttagc 343  Q
    ||||||    
T  18875617 cttagc 18875622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 27574514 - 27574409
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||| |||||||| | || |||||| || || ||||||||||| | |||||  |||||| |||| |||| ||||||| ||||||||||| ||||||||    
T  27574514 aaactcagtatccgatccaagaattgattaatccgaggggaccaaactcaccgcccacttgcgggggccccttttaaagccagagcaagctctgtatgaa 27574415  T
Q  338 cttagc 343  Q
     |||||    
T  27574414 tttagc 27574409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 55961795 - 55961859
Alignment:
Q  278 accaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||||  ||||||||||| |||||||||||| ||||||||||| |||||| |||||||    
T  55961795 accaatcccaccgcccacttgtgggg-ccccgtttaaagtcagagcaagctctgtatggacttagc 55961859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 13550370 - 13550299
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||||| |||| ||||  |||||||||||||||||||||||| ||||| |||||  ||||| |||||||    
T  13550370 gaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcggtatggacttagc 13550299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 35674797 - 35674847
Alignment:
Q  293 cacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||| |||| |||||||||||||||||||||||| |||||| |||||||    
T  35674797 cacttgcgggggccccgtttaaaggcagagcaagctctgtatggacttagc 35674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 51535813 - 51535731
Alignment:
Q  242 tcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttg-tggggaccccgtttaaaggcagagc 323  Q
    ||||||||||| |||| ||| ||||| |  |||||||||||||||||||  |||||| ||||| |||||||||||| ||||||    
T  51535813 tcggtatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttgctgggggccccgtttaaagccagagc 51535731  T

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Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 9517650 - 9517747
Alignment:
Q  246 tatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||| | || ||| ||||| || ||||||||||||| ||||   ||| || |||| |||||||||||| ||||||||||| |||||| |||||||    
T  9517650 tatccgatccaagaatcgactaatccgaggggaccaatctcaccacccacctgcgggggccccgtttaaagtcagagcaagctctgtatggacttagc 9517747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 23639820 - 23639760
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttg 298  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||| ||||||    
T  23639820 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttg 23639760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 23645478 - 23645418
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttg 298  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||| ||||||    
T  23645478 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttg 23645418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 8158434 - 8158355
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagc-aagctttgtatgaactta 341  Q
    ||||| ||| |||| |||||||||||||| |||||| ||||  | ||||||||| |||||| ||| ||||||||||||||    
T  8158434 gactaatcttagggaaccaatcccaccgtccacttgcggggctctcgtttaaagtcagagcaaagttttgtatgaactta 8158355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 343
Target Start/End: Original strand, 13584289 - 13584360
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||| ||||||| |||||| ||| ||||| || |||||||||||| ||||||||||| | |||| |||||||    
T  13584289 gaggagaccaattccaccgctcatttgtgagggccccgtttaaagccagagcaagctctctatggacttagc 13584360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 22625097 - 22625147
Alignment:
Q  273 aggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagc 323  Q
    ||||||||||||||||||  |||||| |||| |||| ||||||||||||||    
T  22625097 aggggaccaatcccaccgcccacttgcgggggccccatttaaaggcagagc 22625147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 30879198 - 30879263
Alignment:
Q  269 tctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    |||||||| |||||||||||||| ||||||   ||||||| ||||||| |||||||| |||||||||    
T  30879198 tctgagggaaccaatcccaccgtccacttg-caggaccccctttaaagccagagcaaactttgtatg 30879263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 33992767 - 33992717
Alignment:
Q  293 cacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||| |||| |||||||||||| ||||||||||| |||||| |||||||    
T  33992767 cacttgcgggggccccgtttaaagccagagcaagctatgtatggacttagc 33992717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 10143822 - 10143779
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaag 316  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||    
T  10143822 gaggggaccaatcccaccgtccacttgcgggga-cccgtttaaag 10143779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 34371920 - 34371998
Alignment:
Q  45 cagacaattttttatgaagaag---tgcttccacatcaaacaataattaataggttatcttgatcaaa--tagaggcaaatgt 122  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||||    ||||||||||| | |||  |||||||||||||    
T  34371920 cagacaattttttatgaagaagaagtgcttccacttcaaacaataat----aggttatcttggtaaaaaatagaggcaaatgt 34371998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 326
Target Start/End: Complemental strand, 51595218 - 51595130
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaag 326  Q
    ||||||||||||||| | || ||| || || || || | || |||| ||||||| |||||| ||||| ||||||||||| |||||||||    
T  51595218 aaactcggtatccgatccaagaatcgattaatccgaagagatcaattccaccgtccacttgcggggatcccgtttaaagtcagagcaag 51595130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 28669069 - 28668965
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  ||||||||||| |||||||||||| || |||||||| |||||| |    
T  28669069 aaactcggtatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagcaagctctgtatgga 28668970  T
Q  338 cttag 342  Q
    |||||    
T  28668969 cttag 28668965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 15038155 - 15038050
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| ||||||||||||||||||||||  |||||| |||| | |||||||||| || |||||||| |||||| |    
T  15038155 aaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagcaagctctgtatgga 15038056  T
Q  338 cttagc 343  Q
    ||||||    
T  15038055 cttagc 15038050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 35171996 - 35171891
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||||||   || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  35171996 aaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 35171897  T
Q  338 cttagc 343  Q
    ||||||    
T  35171896 cttagc 35171891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 11941211 - 11941314
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |    
T  11941211 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatgga 11941310  T
Q  338 ctta 341  Q
    ||||    
T  11941311 ctta 11941314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 44946054 - 44946159
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||| | |||||| |    
T  44946054 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagttctgtatgga 44946153  T
Q  338 cttagc 343  Q
    ||||||    
T  44946154 cttagc 44946159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 341
Target Start/End: Complemental strand, 4769354 - 4769259
Alignment:
Q  246 tatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaactta 341  Q
    ||||||| |||| ||| ||||| | |||||||||||| | |||||| |||||| |||| |||||||||||| ||||||||||| |||||| |||||    
T  4769354 tatccgatctaagaatcgactaatttgaggggaccaacctcaccgtccacttgcggggcccccgtttaaagccagagcaagctctgtatggactta 4769259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 30466831 - 30466936
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || || |||||||||||||| |  |||||| |||| ||| |||||||| ||||||||||| |||||| |    
T  30466831 aaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaagctctgtatgga 30466930  T
Q  338 cttagc 343  Q
    ||||||    
T  30466931 cttagc 30466936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 31778227 - 31778138
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagc 327  Q
    ||||||||||||||| | || || |||||| |||||| ||||||||| |||||| |||||| |||| |||| ||||||| ||||||||||    
T  31778227 aaactcggtatccgatccaagaactgactaatctgagaggaccaatctcaccgtccacttgcgggggccccatttaaagccagagcaagc 31778138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 33827574 - 33827679
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| ||  ||||||||||||||||||  ||||||  |||  ||||||||||| ||||||||||| |||||| |    
T  33827574 aaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagagcaagctctgtatgga 33827673  T
Q  338 cttagc 343  Q
    ||||||    
T  33827674 cttagc 33827679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 41314187 - 41314083
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | || ||| || || ||||||||||||||||||||||| ||||||  |||| ||||||||||| ||||||||||| |||||  |    
T  41314187 aaacttggtatccgatcgaagaatcgattaatctgaggggaccaatcccaccgtccacttg-cgggatcccgtttaaagtcagagcaagctctgtataga 41314089  T
Q  338 cttagc 343  Q
    ||||||    
T  41314088 cttagc 41314083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 36242347 - 36242403
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    |||||||||||||||||||  |||||| ||||||||||||||||| |||||||||||    
T  36242347 gaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagct 36242403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 2140487 - 2140585
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttg-tggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    ||||||||||||||| | |||||| ||||| || |||||||||||||||||||  ||||||  ||||  ||| ||||||| ||||||||||| ||||||    
T  2140487 aaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggggggcccatttaaagccagagcaagctctgtatg 2140585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 24196198 - 24196095
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||| | | || ||| ||||| || |||||||||||||||||||  |||||| ||||  ||||||||||| ||||||||| | |||||| |    
T  24196198 aaactcggtatccaatcaaaaaatcgactaatccgaggggaccaatcccaccgcccacttgcgggg--cccgtttaaagccagagcaagttctgtatgga 24196101  T
Q  338 cttagc 343  Q
    ||||||    
T  24196100 cttagc 24196095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 41330038 - 41329948
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagct 328  Q
    ||||||||||||||  | || ||  ||||| |||||||||||||||| |||||  ||||||||||| |||| ||||||| |||||||||||    
T  41330038 aaactcggtatccggtccaagaaccgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagccagagcaagct 41329948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 3943936 - 3943831
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | |||||  ||||| ||  |||||||||||||||||   |||||| |||  |||||||||||| ||||||||||| |||||| |    
T  3943936 aaacttggtatccgatccaataaccgactaatccaaggggaccaatcccaccacccacttgcgggagccccgtttaaagccagagcaagctctgtatgga 3943837  T
Q  338 cttagc 343  Q
    ||||||    
T  3943836 cttagc 3943831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 43374331 - 43374431
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || || |||||||||||||||| ||||||| ||||     | |||||| ||||||||||||||||| ||    
T  43374331 aaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccaccgctcacttgcgggg-----gcttaaagccagagcaagctttgtataaa 43374425  T
Q  338 cttagc 343  Q
    ||||||    
T  43374426 cttagc 43374431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 1191675 - 1191604
Alignment:
Q  272 gaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||| |||| |||||||||||||  |||||| |||||||||| |||||||| || |||||| |||||||    
T  1191675 gaggggaacaattccaccgttcactttcggggacaccgtttaaagccagagcaaactctgtatggacttagc 1191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 36390606 - 36390673
Alignment:
Q  275 gggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttag 342  Q
    ||||||||||||||||  |||||| ||||  ||| ||||||| |||||||||||||||||| ||||||    
T  36390606 gggaccaatcccaccgcccacttgcgggggtcccatttaaagtcagagcaagctttgtatggacttag 36390673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 714126 - 714231
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||| | |||| ||| ||||| ||||||||||| || |||||||  || ||| |||| | |||||||||| |||||||| || | |||| |    
T  714126 aaactcggtatccaatctaagaatcgactaatctgaggggacgaaacccaccgcccatttgcgggggctccgtttaaagtcagagcaaactctctatgga 714225  T
Q  338 cttagc 343  Q
    ||||||    
T  714226 cttagc 714231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 17324960 - 17324857
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||| ||||| | ||||||||| ||||||||||  ||||||||||| |||  ||||||| ||||||||||| |||||| |    
T  17324960 aaactcgatatccgatc-aagaatcgactaatttgaggggactaatcccaccgcccacttgtgggggccca-tttaaagccagagcaagctctgtatgga 17324863  T
Q  338 cttagc 343  Q
    ||||||    
T  17324862 cttagc 17324857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 34516415 - 34516519
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | || ||| ||||| || |||||||||||||||||||  ||||||  |||  |||||||||||  |||||||||| |||||| |    
T  34516415 aaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaggg-gcccgtttaaagcgagagcaagctctgtatgga 34516513  T
Q  338 cttagc 343  Q
    ||||||    
T  34516514 cttagc 34516519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 13266685 - 13266582
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||| ||||||| | || ||| ||||| | |||||||||||||||||     |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  13266685 aaactcgatatccgatccaagaatcgactaatttgaggggaccaatcccattacccacttgcgggg-ccccgtttaaagccagagcaagctctgtatgga 13266587  T
Q  338 cttag 342  Q
    |||||    
T  13266586 cttag 13266582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 4567480 - 4567535
Alignment:
Q  280 caatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    |||||||||||  ||||||||||| |||||||||||| |||| |||||| ||||||    
T  4567480 caatcccaccgcccacttgtgggggccccgtttaaagccagaacaagctctgtatg 4567535  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 323
Target Start/End: Complemental strand, 25293355 - 25293269
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttg-tggggaccccgtttaaaggcagagc 323  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||| ||  ||||||  |||| |||||||||||| ||||||    
T  25293355 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagc 25293269  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 18692156 - 18692091
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtgggg 303  Q
    ||||||||||||||| | || ||| ||||| |  |||||||||||||||||||  |||||||||||    
T  18692156 aaactcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgtgggg 18692091  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 44976191 - 44976260
Alignment:
Q  275 gggaccaatcccaccgttcacttgtgggga-ccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||| |||||||||||  |||||| ||||| |||||||||||| |||||||| || |||||| |||||||    
T  44976191 gggatcaatcccaccgcccacttgcggggagccccgtttaaagccagagcaaactctgtatggacttagc 44976260  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 16426926 - 16426880
Alignment:
Q  45 cagacaattttttatgaagaag---tgcttccacatcaaacaataat 88  Q
    ||||||||||||||||||||||   ||||||||| ||||||||||||    
T  16426926 cagacaattttttatgaagaagaagtgcttccacttcaaacaataat 16426880  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 338
Target Start/End: Complemental strand, 18708648 - 18708572
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagc-aagctttgtatgaac 338  Q
    ||||| |||||||||| |||||||||||| || ||| ||||  ||||||| ||| |||||| ||||| |||||||||    
T  18708648 gactaatctgaggggatcaatcccaccgtccatttgcgggggtcccgttttaagtcagagcaaagctctgtatgaac 18708572  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 44929847 - 44929923
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaa 314  Q
    ||||||||||||||| | || ||| ||||| |   ||||||||||||||||||| |||||| ||||  |||||||||    
T  44929847 aaactcggtatccgatccaagaatcgactaattcaaggggaccaatcccaccgtccacttgcgggggtcccgtttaa 44929923  T

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Target: scaffold0576 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 5083 - 5188
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || |||||||||||||||||||  || ||| |||| |||||||||||| ||||||||||| |||||| |    
T  5083 aaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctctgtatgga 5182  T
Q  338 cttagc 343  Q
    ||||||    
T  5183 cttagc 5188  T

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Target: scaffold0459 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 10696 - 10799
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||||||||| |  |||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||| |||||| |    
T  10696 aaactcggtatccgatc-aagaattgactaattcgaggggaccaatcccaccgtccacttgtgggg-ccccatttaaagccagagcaagctctgtatgga 10793  T
Q  338 cttagc 343  Q
    ||||||    
T  10794 cttagc 10799  T

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Target: scaffold0623 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 1058 - 1162
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  |||||||||||||||||||| |||||| |||| |||| ||||||| ||||||||||| |||||| |    
T  1058 aaactcggtatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatgga 1156  T
Q  338 cttagc 343  Q
    ||||||    
T  1157 cttagc 1162  T

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Target: scaffold0366 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 9301 - 9405
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| |  |||||||||||||||||||| |||||| |||| |||| ||||||| ||||||||||| |||||| |    
T  9301 aaactcggtatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatgga 9399  T
Q  338 cttagc 343  Q
    ||||||    
T  9400 cttagc 9405  T

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Target: scaffold0366; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 343
Target Start/End: Original strand, 12023 - 12106
Alignment:
Q  259 aattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||||||| |  |||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||| |||||| |||||||    
T  12023 aattgactaattcgaggggaccaatcccaccgtccacttgtgggg-ccccatttaaagccagagcaagctctgtatggacttagc 12106  T

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Target: scaffold0217 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 7310 - 7415
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||| ||||||||| | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||| ||||| |||||| |    
T  7310 aaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagaaagctctgtatgga 7409  T
Q  338 cttagc 343  Q
    ||||||    
T  7410 cttagc 7415  T

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Target: scaffold0070 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 40520 - 40416
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||| |||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |    
T  40520 aaactcggtatccgatccaagaatcgactaatccgaggg-accaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgga 40422  T
Q  338 cttagc 343  Q
    ||||||    
T  40421 cttagc 40416  T

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Target: scaffold1175 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 2452 - 2532
Alignment:
Q  263 gactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||| |||||| |||||||    
T  2452 gactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagc 2532  T

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Target: scaffold0019 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 162005 - 161900
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||||||||| || | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||| || |||| ||||||||||| |||||| |    
T  162005 aaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagcaagctctgtatgga 161906  T
Q  338 cttagc 343  Q
    ||||||    
T  161905 cttagc 161900  T

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Target: scaffold0328 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 13048 - 13126
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaag 316  Q
    ||||||||||||||| | || |||  |||| |||||||||| |||||||||||| |||||| |||| ||||||||||||    
T  13048 aaactcggtatccgatccaagaatcaactaatctgaggggatcaatcccaccgtccacttgcgggggccccgtttaaag 13126  T

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Target: scaffold0102 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 39288 - 39191
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    |||||||||||| || | || ||| ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| |||| |||| | ||||||    
T  39288 aaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagaacaagttctgtatg 39191  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 327
Target Start/End: Complemental strand, 66950 - 66861
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagc 327  Q
    ||||||||||||||| | ||  |  ||||| || |||||||||||||||||||  |||||| |||| |||||||||||| ||||||||||    
T  66950 aaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagc 66861  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 32483 - 32379
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    ||||||||||||||| | || ||| ||||| || ||||||||||||||||||   |||||| |||| || | ||||||| ||||||||||| |||||| |    
T  32483 aaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagcaagctctgtatgga 32385  T
Q  338 cttagc 343  Q
    ||||||    
T  32384 cttagc 32379  T

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Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 97405 - 97472
Alignment:
Q  276 ggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaacttagc 343  Q
    |||||||||||||||  |||||| ||||  ||||||||||| ||||||||||| |||||| |||||||    
T  97405 ggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagcaagctctgtatggacttagc 97472  T

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Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 41646 - 41750
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatgaa 337  Q
    |||||| |||||||| | || ||| ||||| || ||||||||||||||||  |  ||||||  ||| |||||||||||| ||||||||||| |||||| |    
T  41646 aaactctgtatccgatc-aagaatcgactaatccgaggggaccaatcccattgcccacttgcaggggccccgtttaaagccagagcaagctctgtatgga 41744  T
Q  338 cttagc 343  Q
    ||||||    
T  41745 cttagc 41750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 52872 - 52969
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccgttcacttgtggggaccccgtttaaaggcagagcaagctttgtatg 335  Q
    |||||||||||||||   || ||| ||||| || ||| |||||||||| ||||  ||| || |||| |||||||||||| ||||||||||| ||||||    
T  52872 aaactcggtatccgattcaagaatcgactaatccgagaggaccaatcctaccgcccacctgcgggggccccgtttaaagccagagcaagctctgtatg 52969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 304
Target Start/End: Original strand, 72558 - 72593
Alignment:
Q  269 tctgaggggaccaatcccaccgttcacttgtgggga 304  Q
    ||||||||| ||||||||||||||||||||||||||    
T  72558 tctgaggggtccaatcccaccgttcacttgtgggga 72593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 8452 - 8504
Alignment:
Q  238 aaactcggtatccgacctaataattgactagtctgaggggaccaatcccaccg 290  Q
    ||||||||||||||| |||| ||| ||||| || ||| |||||||||||||||    
T  8452 aaactcggtatccgatctaagaatcgactaatccgagcggaccaatcccaccg 8504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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