View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16074_low_15 (Length: 278)
Name: NF16074_low_15
Description: NF16074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16074_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 8683422 - 8683688
Alignment:
| Q |
1 |
tgttataaatggaaaatgtttcactctttagcgttttcattttgctgactttgtctacatgtttgtttgaatttcctagaggtttactatgacaatgaga |
100 |
Q |
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| T |
8683422 |
tgttataaatggaaaatgtttcactctttagcgttttcattttgctgactttgtctacatgtttgtttgaatttcctagaggtttactatgacaatgaga |
8683521 |
T |
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| Q |
101 |
gggattcaaggtgctttgatcataagttcaagtttccaaatggctattggannnnnnnnnnnnnggagaaatgctgtcaggttagtatctgtaacgtctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
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| T |
8683522 |
gggattcaaggtgctttgatcataagttcaagtttccaaatggctattggattttttggtttttggagaaatgctgtcaggttagtatctgtaacttctt |
8683621 |
T |
|
| Q |
201 |
ttgtttcgatttttatgtaaatctttgatttgttatcttatatgttcattgattcattcacaggttc |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8683622 |
ttgtttcgatttttatgtaaatctttgatttgttatcttatatgttcattgattcattcacaggttc |
8683688 |
T |
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