View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16074_low_21 (Length: 264)
Name: NF16074_low_21
Description: NF16074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16074_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 6 - 253
Target Start/End: Original strand, 27567452 - 27567699
Alignment:
| Q |
6 |
aaatacaacatcaaataactcacatacatttataaaacatcagataacaacagttagattaaaaagttgttcaaacaactggttactcacatgcatttat |
105 |
Q |
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| T |
27567452 |
aaatacaacatcaaataactcacatgcatttataaaacatcagataacaacagttagattaaaaagttgttcaaacaactggttactcacatgcatttat |
27567551 |
T |
|
| Q |
106 |
aaagctcccaatcagattaaacgtatatatgatatagatatagattatctctatttatttttcggtaagtctaaaattatttaatatgtcattatgatgt |
205 |
Q |
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||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |
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| T |
27567552 |
aaagctcgcaatcagattaaacgtatatatgatatagatattgattatctctatttaattttcggtgaatctaaaattatttaatatgtcattatgatgt |
27567651 |
T |
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| Q |
206 |
gataagatttatgttaattaatttaataaagttgatacataaattcat |
253 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
27567652 |
gataagattaatgttaattaatttaataaagttgatacataaattcat |
27567699 |
T |
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