View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16075_low_20 (Length: 271)
Name: NF16075_low_20
Description: NF16075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16075_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 41943496 - 41943273
Alignment:
| Q |
13 |
aaaatggaagtataatgcatatttctctgggtttttaatgtcatgtttctctctttctatcgttttgtaataatactaccaaaaacttattagtaatctt |
112 |
Q |
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| T |
41943496 |
aaaatggaagcataatgcatatttctctgggtttttaatgtcatgtttctctctttctatcgttttgtaataatactaccaaaaacttattagtaatctt |
41943397 |
T |
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| Q |
113 |
gagttacattatgcaacataaactttatgccatagcaatactaaacatttattctcataaaaattatgtagatcccactgctttatgttctcaagtgtct |
212 |
Q |
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| T |
41943396 |
gagttacattatgcaacataaactttatgccatagcaatactaaacatttattctcataaaaattatgtagatcccactgctttatgttctcaagtgtct |
41943297 |
T |
|
| Q |
213 |
aaaccagtggacaataacagtaaa |
236 |
Q |
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|||||||||||||||||||||||| |
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| T |
41943296 |
aaaccagtggacaataacagtaaa |
41943273 |
T |
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