View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16077_high_114 (Length: 213)
Name: NF16077_high_114
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_high_114 |
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Alignment Details
Target: chr8 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 43344028 - 43344207
Alignment:
| Q |
17 |
cacagatgaaacttataaagataatgataagtatccaactgagactagagttgaagcattctctcctccttatttggacgaggctttttataagtatagg |
116 |
Q |
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| T |
43344028 |
cacacatgaaacttataaagataatgataagtatccaactgagactagagttgaagcattctctcctccttatttggacgaggcttttaataagtatagg |
43344127 |
T |
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| Q |
117 |
ccacaaattaatcaagatgcaactaaaaaagagttaaagtatggaaatacatttgaaacaaatttttcagtggaagatgg |
196 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43344128 |
ccacaaattaatcaaggtgcaactaaaaaagagttaaagtatggaaatacatttgaaacaaatttttcagtggaagatgg |
43344207 |
T |
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