View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16077_high_117 (Length: 205)
Name: NF16077_high_117
Description: NF16077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16077_high_117 |
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Alignment Details
Target: chr7 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 10976578 - 10976406
Alignment:
| Q |
20 |
ttacttgacgaacatcgctttcccaaactatgtgactatggtatgtctatgatcgccgaagagatcgaaaacattcaggtattgttgtttcatattttat |
119 |
Q |
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| T |
10976578 |
ttacttgacgaacatcgctttcccaaactaagtgactatggtatgtctatgatcgccgaagagatcgaaaacattcaggtattgttgtttcatattttat |
10976479 |
T |
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| Q |
120 |
tcaactatataaata-tttaccttggtccattatgcttgaaactatgaagattga-ctctgttgcttcctatg |
190 |
Q |
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| T |
10976478 |
tcatctatataactattttaccttggtccattatgcttgatcccttgaatattgacctctgttgctttctatg |
10976406 |
T |
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